BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011201
(491 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/483 (61%), Positives = 384/483 (79%), Gaps = 8/483 (1%)
Query: 6 KKLPPIL---IHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLL 62
KKLPPIL + PP P P+ LP P+TP L +++ + H+ LL FLK+HL
Sbjct: 2 KKLPPILRKLQTPQPTPPSPLPNAILPPSPQTPVAPLLNLSFSSPHHYNQLLHFLKSHLT 61
Query: 63 TPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
P TP+SLLHFLKSKLH HP+FTHYDFH+F WASTIDSFRHDH+TF ++ R+LA++
Sbjct: 62 FP----FTPNSLLHFLKSKLHFHPKFTHYDFHVFNWASTIDSFRHDHSTFAWMARTLATT 117
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
RF EL S+L F++++PCPCS DGIFSCP+ E IF F+++A+ +A + ++ + AF++MRK
Sbjct: 118 DRFFELTSLLRFLASSPCPCS-DGIFSCPQTESIFQFSISAYCRARKFDEAVFAFDSMRK 176
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
LIDGRPSV +YN+LINGFVK FDKALGFY RM+ DRVKPDV TFNILISG+CRN +F
Sbjct: 177 LIDGRPSVVVYNILINGFVKSGRFDKALGFYSRMLSDRVKPDVYTFNILISGYCRNSQFV 236
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
AL LF+EMREKGC+PNV+SFNTLI+GFF ERKF++G+ +AYEMIELGC+FSSVTCEIL+
Sbjct: 237 QALELFKEMREKGCSPNVISFNTLIKGFFRERKFEDGIALAYEMIELGCKFSSVTCEILM 296
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGL EG++ +ACE+++DFSR+ VLPKD+DY+G+VE LCG+GNAG A+EVVDELW +GN+
Sbjct: 297 DGLSREGKIFEACEILLDFSRKQVLPKDYDYYGVVEMLCGKGNAGKAMEVVDELWMEGNV 356
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
PS I TTLI+GLR+ + +A + E+ML+ G++PDSVTFN LL+DLC+V +TV+A++L
Sbjct: 357 PSFITSTTLIDGLRKEGRVNDAMNVTERMLEVGMIPDSVTFNSLLQDLCNVRKTVEANKL 416
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
RLLAS+KG +PD TY+ LVSGYT E + EG+ LV EMLD+ FIPD+ATYN MD L N
Sbjct: 417 RLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNRLMDRLLN 476
Query: 483 ARK 485
K
Sbjct: 477 THK 479
>gi|225447824|ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 480
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 299/489 (61%), Positives = 383/489 (78%), Gaps = 12/489 (2%)
Query: 1 MAGLKKKLPPILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTH 60
M L++ LP L PP P P+ + P+ P+++L T+HH L +FLK H
Sbjct: 3 MNKLRQTLPKPL----HPPSQFTPPTASPNLISSTPI--PTLSLANTSHH-QLHQFLKAH 55
Query: 61 LLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLA 120
L TP+ TP LL FLK+KLH+HP+F+H+D HIF WA+TIDSFRHDH+T+ ++V++LA
Sbjct: 56 L-TPS---FTPQDLLIFLKNKLHYHPKFSHFDLHIFTWAATIDSFRHDHSTYEWMVKTLA 111
Query: 121 SSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM 180
+ RF +LHS+L + +NPCPCS DGIFSCP E IF FA+NAF + R+ D +AF +M
Sbjct: 112 ITDRFDDLHSLLQGMVSNPCPCS-DGIFSCPRSEPIFRFALNAFCRVGRLEDAEIAFASM 170
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
R++IDG+PSV+++N+LING+VKCRE +K + Y++M++DRVKPDV TFN LIS CRN +
Sbjct: 171 RRMIDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQ 230
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
F LAL +F+EM++KGC+PNVVSFNTLI+G F ERKF+EGV MAYEM+ELGCEFS+VTCEI
Sbjct: 231 FGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCEFSNVTCEI 290
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
LVDGLC EGRVL+A +L+IDFS +G LP FDYF L+E LCGE N ALE++D+LW+KG
Sbjct: 291 LVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKG 350
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
N PS IACTTLIEGLRR K EA LMEKML+EGILPDSVT NCLL+DLC+VGR+ +A+
Sbjct: 351 NAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEAN 410
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+LRLLAS+KGLD DGMT++ILV+GY+RE +RKEG+ L++EMLD GFIPDLA+YN M+GL
Sbjct: 411 KLRLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLDEMLDLGFIPDLASYNRLMNGL 470
Query: 481 SNARKSVRQ 489
SN S R
Sbjct: 471 SNGGSSHRH 479
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 296/484 (61%), Positives = 382/484 (78%), Gaps = 14/484 (2%)
Query: 4 LKKKLP-PILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLL 62
+K LP P+ ++ PP +P++ +PS P +P+++L T+HH L +FLK HL
Sbjct: 114 FRKTLPKPLHPLSQFTPPTASPNL-IPSTP------IPTLSLANTSHH-QLHQFLKAHL- 164
Query: 63 TPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
TP+ TP LL FLK+KLH+HP+F H+D HIF WA+TIDSFRHD +T+ ++V++LA +
Sbjct: 165 TPS---FTPQDLLIFLKNKLHYHPKFAHFDLHIFTWAATIDSFRHDQSTYEWMVKTLAIT 221
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
RF +LHS+L + +NPCP S DGIFSCP E IF FA+NAF + R+ D ++FE+MR+
Sbjct: 222 DRFDDLHSLLQGMVSNPCPYS-DGIFSCPRSEPIFRFALNAFCRVGRLEDAEISFESMRR 280
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+IDG+PSV++YN+LING+V CRE +K + Y++M++DRVKPDV TFN LIS CRN +F
Sbjct: 281 MIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFG 340
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
LAL +F+EM++KGC+PNVVSFNTLI+G F ERKF+EG+ MAYEM+ELGCEFS+VTCEILV
Sbjct: 341 LALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVTCEILV 400
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGLC EGRVL+AC+L+IDFS +G LP FDYF L+E LCGE N ALE++D+LW+KGN
Sbjct: 401 DGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNA 460
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
PS IACT IEGLRR RK EA LMEKML+EGILPDSVT NCLL+DLC+VGR+ +A+ L
Sbjct: 461 PSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANEL 520
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
RLLAS+KGLD DGMT++ILV+GY+RE +RKEG+ L+NEMLD GFIPDLA+YN M+GLSN
Sbjct: 521 RLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSN 580
Query: 483 ARKS 486
S
Sbjct: 581 GGSS 584
>gi|297823431|ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
gi|297325437|gb|EFH55857.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/479 (58%), Positives = 364/479 (75%), Gaps = 9/479 (1%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLP-SVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLL 75
+PP P IP P P+ P +++P ++TL+P+ H++ + FL+ ++ P + +TP +LL
Sbjct: 23 TPPSPEIYRIPNPP-PKLPEISIPPTLTLSPSPKHSNFVNFLENNI--PHHQTLTPQNLL 79
Query: 76 HFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFI 135
FL+SKL HHP + HYDF +F WA+T+D+FRHDH +FL++ RSLA+++RF +L+ +L+F+
Sbjct: 80 GFLRSKLRHHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFHDLYRLLSFV 139
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ANPCPCS+ GIFSCPE+E IF A++A+ +A +M+ LLAF+ M++LIDG+P+V +YN
Sbjct: 140 AANPCPCSS-GIFSCPELEPIFRSAIDAYCRAGKMDYALLAFDTMKRLIDGKPNVGVYNT 198
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++NG+VK + DKAL FY RM ++R KPDV TFN LI+G+CR+ KFDLAL LFREM+EKG
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNTLINGYCRSSKFDLALDLFREMKEKG 258
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PNVVSFNTLIRGF K +EG+ MAYEMIE+GC FS TCEILVDGLC EGRV AC
Sbjct: 259 CEPNVVSFNTLIRGFLSRGKIEEGIKMAYEMIEIGCRFSEATCEILVDGLCREGRVDDAC 318
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
LVID S VLP FDY LVEKLCGE A A+E+V+ELWKKG P IACTTL+EGL
Sbjct: 319 GLVIDLSNSRVLPSGFDYGSLVEKLCGENKADRAMEMVEELWKKGKTPCFIACTTLVEGL 378
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R+ + +ASG ME+M+ GILPDSVTFN LL DLC R+ DA+ LRLLAS+KG +PD
Sbjct: 379 RKSGRTEKASGFMEEMMNAGILPDSVTFNLLLRDLCSSDRSTDANSLRLLASSKGYEPDE 438
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN----ARKSVRQT 490
TYH+LVSG+T+E RRKEGE LVNEMLD+ +PD+ TYN MDGLS +RK VR +
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCSGKFSRKQVRMS 497
>gi|79568177|ref|NP_181166.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206301|sp|Q9SJN2.1|PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240
gi|4510352|gb|AAD21441.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254126|gb|AEC09220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 497
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/477 (58%), Positives = 365/477 (76%), Gaps = 9/477 (1%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLP-SVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLL 75
+PP P IP P P+ P +++P ++TL+P+ H++ + FL+ +L P + +TP +LL
Sbjct: 23 TPPLPEIYRIPNPP-PKLPEISIPPTLTLSPSPKHSNFVNFLENNL--PHHQTLTPQTLL 79
Query: 76 HFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFI 135
FL+SK+ +HP + HYDF +F WA+T+D+FRHDH +FL++ RSLA+++RF +L+ +L+F+
Sbjct: 80 GFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFV 139
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ANPCPCS+ GIFSCPE+E IF A++A+ +A +M+ LLAF+ M++LIDG+P+V +YN
Sbjct: 140 AANPCPCSS-GIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNT 198
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++NG+VK + DKAL FY RM ++R KPDV TFNILI+G+CR+ KFDLAL LFREM+EKG
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PNVVSFNTLIRGF K +EGV MAYEMIELGC FS TCEILVDGLC EGRV AC
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDAC 318
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
LV+D + VLP +FDY LVEKLCGE A A+E+++ELWKKG P IACTTL+EGL
Sbjct: 319 GLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGL 378
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R+ + +ASG MEKM+ GILPDSVTFN LL DLC + DA+RLRLLAS+KG +PD
Sbjct: 379 RKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDE 438
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN----ARKSVR 488
TYH+LVSG+T+E RRKEGE LVNEMLD+ +PD+ TYN MDGLS +RK VR
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVR 495
>gi|110742004|dbj|BAE98941.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 497
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/477 (58%), Positives = 365/477 (76%), Gaps = 9/477 (1%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLP-SVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLL 75
+PP P IP P P+ P +++P ++TL+P+ H++ + FL+ +L P + +TP +LL
Sbjct: 23 TPPLPEIYRIPNPP-PKLPEISIPPTLTLSPSPKHSNFVNFLENNL--PHHQTLTPQTLL 79
Query: 76 HFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFI 135
FL+SK+ +HP + HYDF +F WA+T+D+FRHDH +FL++ RSLA+++RF +L+ +L+F+
Sbjct: 80 GFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFV 139
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ANPCPCS+ GIFSCPE+E IF A++A+ +A +M+ LLAF+ M++LIDG+P+V +YN
Sbjct: 140 AANPCPCSS-GIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNT 198
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++NG+VK + DKAL FY RM ++R KPDV TFNILI+G+CR+ KFDLAL LFREM+EKG
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PNVVSFNTLIRGF K +EGV MAYEMIELGC FS TCEILVDGLC EGRV AC
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDAC 318
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
LV+D + VLP +FDY LVEKLCGE A A+E+++ELWKKG P IACTTL+EGL
Sbjct: 319 GLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGL 378
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R+ + +ASG MEKM+ GILPDSVTFN LL DLC + DA+RLRLLAS+KG +PD
Sbjct: 379 RKSGRTEKASGFMEKMMNAGILPDSVTFNLLLGDLCSSDHSTDANRLRLLASSKGYEPDE 438
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN----ARKSVR 488
TYH+LVSG+T+E RRKEGE LVNEMLD+ +PD+ TYN MDGLS +RK VR
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVR 495
>gi|357511073|ref|XP_003625825.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500840|gb|AES82043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 485
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/446 (61%), Positives = 347/446 (77%), Gaps = 6/446 (1%)
Query: 44 LTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTID 103
L+PT H+TH L FL HL P +TP +L HFLKSKLHHHP FTH+DFH+F+WAST+D
Sbjct: 37 LSPTQHYTHFLHFLNHHLTPP----LTPQTLTHFLKSKLHHHPSFTHFDFHLFSWASTLD 92
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
+F H+HT++ ++ R+LA S+RFS L ++L FIS NPC CS IFSCP+ E IF FA+
Sbjct: 93 TFSHNHTSYEWMTRTLALSHRFSLLRTLLTFISTNPCQCSQ-AIFSCPQTEPIFRFAIQY 151
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
+ KA + +D + AF MR+LIDG+PSVS+ N+LI+GFVK FD+A FY++MV+DR+KP
Sbjct: 152 YCKAFKFDDAVYAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKP 211
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
DV TFNILISG+CR+ KF AL +F EMR+ GC+PNVV+FNTLI+G F E + DEG+ M
Sbjct: 212 DVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMV 271
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
YEMIELGC+ S VTCEILVDGLC EGRV + C+L+++FS+RGVLPK +DYF LVE LCG+
Sbjct: 272 YEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGK 331
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EGILPDSVT 402
G A ALEV+ ELW KG +PS+I+C +I+GLR L K EA L+EKMLK EG++ D VT
Sbjct: 332 GEAFKALEVIYELWSKGCVPSLISCIVMIDGLRGLGKIEEAMRLVEKMLKEEGMVLDVVT 391
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
FN +L+DLCD GRT DA+RLRLLAS+KGL+PD MTY ILV+GY E + EGE +VNEML
Sbjct: 392 FNSVLQDLCDAGRTEDANRLRLLASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEML 451
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVR 488
D+GFIPDLA+YN MD LSN ++ R
Sbjct: 452 DKGFIPDLASYNKLMDALSNCQRPNR 477
>gi|296081510|emb|CBI20033.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 286/489 (58%), Positives = 363/489 (74%), Gaps = 42/489 (8%)
Query: 1 MAGLKKKLPPILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTH 60
M L++ LP L PP P P+ + P+ P+++L T+HH L +FLK H
Sbjct: 34 MNKLRQTLPKPL----HPPSQFTPPTASPNLISSTPI--PTLSLANTSHH-QLHQFLKAH 86
Query: 61 LLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLA 120
L TP+ TP LL FLK+KLH+HP+F+H+D HIF WA+TIDSFRHDH+T+ ++V++LA
Sbjct: 87 L-TPS---FTPQDLLIFLKNKLHYHPKFSHFDLHIFTWAATIDSFRHDHSTYEWMVKTLA 142
Query: 121 SSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM 180
+ RF +LHS+L + +NPCPCS DGIFSCP M
Sbjct: 143 ITDRFDDLHSLLQGMVSNPCPCS-DGIFSCPRM--------------------------- 174
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
IDG+PSV+++N+LING+VKCRE +K + Y++M++DRVKPDV TFN LIS CRN +
Sbjct: 175 ---IDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQ 231
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
F LAL +F+EM++KGC+PNVVSFNTLI+G F ERKF+EGV MAYEM+ELGCEFS+VTCEI
Sbjct: 232 FGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCEFSNVTCEI 291
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
LVDGLC EGRVL+A +L+IDFS +G LP FDYF L+E LCGE N ALE++D+LW+KG
Sbjct: 292 LVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKG 351
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
N PS IACTTLIEGLRR K EA LMEKML+EGILPDSVT NCLL+DLC+VGR+ +A+
Sbjct: 352 NAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEAN 411
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+LRLLAS+KGLD DGMT++ILV+GY+RE +RKEG+ L++EMLD GFIPDLA+YN M+GL
Sbjct: 412 KLRLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLDEMLDLGFIPDLASYNRLMNGL 471
Query: 481 SNARKSVRQ 489
SN S R
Sbjct: 472 SNGGSSHRH 480
>gi|298204661|emb|CBI25159.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/483 (57%), Positives = 359/483 (74%), Gaps = 47/483 (9%)
Query: 5 KKKLP-PILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLT 63
+K LP P+ ++ PP +P++ +PS P +P+++L T+HH L +FLK HL T
Sbjct: 115 RKTLPKPLHPLSQFTPPTASPNL-IPSTP------IPTLSLANTSHH-QLHQFLKAHL-T 165
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSY 123
P+ TP LL FLK+KLH+HP+F H+D HIF WA+TIDSFRHD +T+ ++V++LA +
Sbjct: 166 PS---FTPQDLLIFLKNKLHYHPKFAHFDLHIFTWAATIDSFRHDQSTYEWMVKTLAITD 222
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
RF +LHS+L + +NPCP S DGIFS +
Sbjct: 223 RFDDLHSLLQGMVSNPCPYS-DGIFS---------------------------------M 248
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
IDG+PSV++YN+LING+V CRE +K + Y++M++DRVKPDV TFN LIS CRN +F L
Sbjct: 249 IDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGL 308
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
AL +F+EM++KGC+PNVVSFNTLI+G F ERKF+EG+ MAYEM+ELGCEFS+VTCEILVD
Sbjct: 309 ALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVTCEILVD 368
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC EGRVL+AC+L+IDFS +G LP FDYF L+E LCGE N ALE++D+LW+KGN P
Sbjct: 369 GLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNAP 428
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
S IACT IEGLRR RK EA LMEKML+EGILPDSVT NCLL+DLC+VGR+ +A+ LR
Sbjct: 429 SSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANELR 488
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
LLAS+KGLD DGMT++ILV+GY+RE +RKEG+ L+NEMLD GFIPDLA+YN M+GLSN
Sbjct: 489 LLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSNG 548
Query: 484 RKS 486
S
Sbjct: 549 GSS 551
>gi|356503811|ref|XP_003520696.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Glycine max]
Length = 506
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/469 (56%), Positives = 340/469 (72%), Gaps = 13/469 (2%)
Query: 23 APSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKL 82
P PLPS P P T H+ L FLK+H P TP +LLHFLKSKL
Sbjct: 13 GPCCPLPSPPA------PRDTAVSPVHYARFLDFLKSHWAPP----FTPDTLLHFLKSKL 62
Query: 83 HHHPQFTHYDFHIFAWAST-IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCP 141
HHHP F+H+DFH+F WAS+ +DSFRH H TF ++ RSLAS++R +L ++L+ IS+NPCP
Sbjct: 63 HHHPSFSHFDFHLFTWASSSLDSFRHTHLTFHWMARSLASTHRLPQLRTLLHLISSNPCP 122
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV 201
CS IFSCP+ + IF +++AF K+N +ND + AF +M KLIDG+P+V++ N+LI+ FV
Sbjct: 123 CS-PSIFSCPQTQPIFSLSIHAFSKSNLLNDAVSAFHSMCKLIDGKPNVAVCNLLIHAFV 181
Query: 202 KCREFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K + AL FY MV + RVKPDV TFNILISG+CRN +F+LAL +F EM + GC PNV
Sbjct: 182 KRGSLNAALQFYREMVLKHRVKPDVFTFNILISGYCRNSQFNLALEMFHEMGKMGCLPNV 241
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V+FNTLI+G F E +E + MA EM++LG FSSV+CEILV GLC EGRVL+ACEL+++
Sbjct: 242 VTFNTLIKGLFREGNVEEAIGMAREMVQLGIRFSSVSCEILVQGLCKEGRVLQACELLLE 301
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
F + VLP+ FD F L+E LCGEG A ALEVV ELW G++PS++AC +++GLR L K
Sbjct: 302 FCEKKVLPEGFDCFALLEVLCGEGYAMRALEVVYELWNGGSVPSLVACIVMVDGLRGLGK 361
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA L+E+ML+EG++ D VTFNC+L D+CD RT +A+RLRLLAS+KG +PD MTY I
Sbjct: 362 IDEARRLVERMLEEGLVLDVVTFNCVLRDICDKRRTNEANRLRLLASSKGFEPDEMTYRI 421
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
LV GY E R++GE LV+EMLD GFIPDLA+YN M GLSN R+ R+
Sbjct: 422 LVMGYIGEGGREQGELLVDEMLDMGFIPDLASYNQLMSGLSNCRRPTRR 470
>gi|224087130|ref|XP_002308078.1| predicted protein [Populus trichocarpa]
gi|222854054|gb|EEE91601.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/374 (67%), Positives = 304/374 (81%), Gaps = 1/374 (0%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174
+ R+LA + R EL +L F+S+NPCPCS +GIFSCP +E IF F +NA+ KA +++D
Sbjct: 1 MARTLAITNRLEELALLLQFMSSNPCPCS-EGIFSCPRIEPIFQFCINAYCKARKLDDAF 59
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
LAFE MRKLIDGRPSV +YN+LING VKC E D+A+G YDRM++DRVKPDV TFNILIS
Sbjct: 60 LAFECMRKLIDGRPSVVVYNILINGCVKCGEHDRAIGVYDRMLKDRVKPDVFTFNILISS 119
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CRN F+LAL LFREM+EKGC+PNVVSFNTLI+GFF ERKF+EGV M YEMI+LGCE S
Sbjct: 120 YCRNYMFELALELFREMKEKGCSPNVVSFNTLIKGFFRERKFEEGVKMVYEMIDLGCEIS 179
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
SVT EILVDGLC EG+ +AC L+IDF+R+GVLP+ FD FGLV+ LC + A ALEV+D
Sbjct: 180 SVTFEILVDGLCKEGQASEACGLLIDFTRKGVLPRKFDSFGLVDMLCKKRMADRALEVLD 239
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
ELW+ GN+PS+I+CTTLIEGLR+ + EA GLME+MLKE I+PD +TFNCLL DLC+ G
Sbjct: 240 ELWRNGNIPSMISCTTLIEGLRKSGRREEAFGLMERMLKENIVPDIMTFNCLLHDLCNEG 299
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
RTVD ++LRLLAS KGLD D MTY ILVSG RE +RKEGE LV+EMLD+ FIPDLATYN
Sbjct: 300 RTVDGNKLRLLASRKGLDVDEMTYDILVSGCIREGKRKEGEALVDEMLDKEFIPDLATYN 359
Query: 475 SYMDGLSNARKSVR 488
++DGLS R S +
Sbjct: 360 RFIDGLSKTRSSAQ 373
>gi|48525335|gb|AAT44969.1| At2g36240 [Arabidopsis thaliana]
gi|50198948|gb|AAT70477.1| At2g36240 [Arabidopsis thaliana]
Length = 379
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/378 (62%), Positives = 295/378 (78%), Gaps = 5/378 (1%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174
+ RSLA+++RF +L+ +L+F++ANPCPCS+ GIFSCPE+E IF A++A+ +A +M+ L
Sbjct: 1 MSRSLAATHRFDDLYRLLSFVAANPCPCSS-GIFSCPELEPIFRSAIDAYCRARKMDYAL 59
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
LAF+ M++LIDG+P+V +YN ++NG+VK + DKAL FY RM ++R KPDV TFNILI+G
Sbjct: 60 LAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILING 119
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR+ KFDLAL LFREM+EKGC PNVVSFNTLIRGF K +EGV MAYEMIELGC FS
Sbjct: 120 YCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFS 179
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
TCEILVDGLC EGRV AC LV+D + VLP +FDY LVEKLCGE A A+E+++
Sbjct: 180 EATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMME 239
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
ELWKKG P IACTTL+EGLR+ + +ASG MEKM+ GILPDSVTFN LL DLC
Sbjct: 240 ELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSD 299
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ DA+RLRLLAS+KG +PD TYH+LVSG+T+E RRKEGE LVNEMLD+ +PD+ TYN
Sbjct: 300 HSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYN 359
Query: 475 SYMDGLSN----ARKSVR 488
MDGLS +RK VR
Sbjct: 360 RLMDGLSCTGKFSRKQVR 377
>gi|147862833|emb|CAN78364.1| hypothetical protein VITISV_028668 [Vitis vinifera]
Length = 488
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/280 (67%), Positives = 239/280 (85%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R+ D +AF +MR++IDG+PSV++YN+LING+VKCRE +K + Y++M++DRVKPDV TF
Sbjct: 64 RLEDAEIAFASMRRMIDGKPSVAMYNILINGYVKCREHEKVMTVYEKMIKDRVKPDVFTF 123
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N LIS CRN +F LAL +F+EM++KGC+PNVVSFNTLI+G F +RKF+EG+ MAYEM+E
Sbjct: 124 NSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRDRKFEEGIGMAYEMLE 183
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
LGCEFS+VTCEILVDGLC EGRVL+AC+L+I FS +G LP FDYF L+E LCGE N
Sbjct: 184 LGCEFSNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFCLIEALCGEENVDR 243
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
ALE++D+LW+KGN PS IACTTLIEGLRR K EA LMEKML+EGILPDSVT NCLL+
Sbjct: 244 ALELLDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLREGILPDSVTCNCLLQ 303
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
DLC+VGR+ +A++LRLLAS+KGLD DGMT++ILV+GY+RE
Sbjct: 304 DLCEVGRSFEANKLRLLASSKGLDSDGMTFNILVNGYSRE 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P F + L+ C G+ALE+ E+ KG P+V++ TLI+G R RK E
Sbjct: 116 VKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRDRKFEEGI 175
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
G+ +ML+ G +VT L++ LC GR ++A L + S KG P+G Y L+
Sbjct: 176 GMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFCLIEAL 235
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
E L++++ +G P + ++GL
Sbjct: 236 CGEENVDRALELLDQLWRKGNAPSSIACTTLIEGL 270
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 159 FAVNAFVKANRMNDGL-LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F N+ + + N LA E +++ D P+V +N LI G + R+F++ +G
Sbjct: 121 FTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRDRKFEEGIGMAYE 180
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKF---------------------------------- 241
M+ + VT IL+ G CR +
Sbjct: 181 MLELGCEFSNVTCEILVDGLCREGRVLEACDLLIYFSGKGALPNGFDYFCLIEALCGEEN 240
Query: 242 -DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D AL L ++ KG P+ ++ TLI G K +E + +M+ G SVTC
Sbjct: 241 VDRALELLDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLREGILPDSVTCNC 300
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
L+ LC GR +A +L + S +G+ + LV EG+
Sbjct: 301 LLQDLCEVGRSFEANKLRLLASSKGLDSDGMTFNILVNGYSREGH 345
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS LI G + + ++A ++M+R+ + PD VT N L+ C + A L
Sbjct: 258 PSSIACTTLIEGLRRFGKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANKL 317
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKF 276
KG + + ++FN L+ G+ E F
Sbjct: 318 RLLASSKGLDSDGMTFNILVNGYSREGHF 346
>gi|359482007|ref|XP_003632703.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g36240-like [Vitis vinifera]
Length = 323
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/331 (55%), Positives = 234/331 (70%), Gaps = 30/331 (9%)
Query: 132 LNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS 191
+N + +NPCPCS DGIFSCP+ E IF FA+NAF K ++D +AF M ++IDG+PSV+
Sbjct: 23 INPMVSNPCPCS-DGIFSCPKSEPIFRFALNAFCKVGILDDAEIAFANMGRMIDGKPSVA 81
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+YN+LING+ +KA+ Y +M++DRVKPDV FN LI CRN F LAL +F+EM
Sbjct: 82 VYNILINGYAX----EKAMAVYAKMIKDRVKPDVFIFNTLIRS-CRNSLFGLALEMFKEM 136
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++KG +PNV SF+TLI+G F ERKF+EG MAYEM+ELGC+FS+VT EILVDGLC EGRV
Sbjct: 137 KDKGRSPNVFSFHTLIKGSFRERKFEEGTGMAYEMLELGCQFSNVTYEILVDGLCREGRV 196
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
L+AC+ +IDFS +G LP FD F L+E LCGE N G ALE VD LW+KGN PS+IAC TL
Sbjct: 197 LEACDFLIDFSGKGALPNGFDCFCLIEALCGEENVGRALEFVDXLWRKGNAPSLIACATL 256
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
IEG RRL K EA LME+M E+L +LRLL ++KGL
Sbjct: 257 IEGSRRLGKIEEAFQLMERM----------------EEL--------VKQLRLLITSKGL 292
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEML 462
DGMT++IL GY+RE +R+EGE L+ EML
Sbjct: 293 GSDGMTFNILAHGYSREGKRREGECLLYEML 323
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
IL++G E KA + + V P F + L+ + C G+ALE+ E+ K
Sbjct: 85 ILINGYAXE----KAMAVYAKMIKDRVKPDVFIFNTLI-RSCRNSLFGLALEMFKEMKDK 139
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P+V + TLI+G R RK E +G+ +ML+ G +VT+ L++ LC GR ++A
Sbjct: 140 GRSPNVFSFHTLIKGSFRERKFEEGTGMAYEMLELGCQFSNVTYEILVDGLCREGRVLEA 199
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ S KG P+G L+ E V+ + +G P L + ++G
Sbjct: 200 CDFLIDFSGKGALPNGFDCFCLIEALCGEENVGRALEFVDXLWRKGNAPSLIACATLIEG 259
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
PSV LI G + A + KM+K+ + PD FN L+ + + +
Sbjct: 78 PSVAVYNILINGYAXEK----AMAVYAKMIKDRVKPDVFIFNTLIRSCRNSLFGLALEMF 133
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + KG P+ ++H L+ G RE + +EG + EML+ G TY +DGL
Sbjct: 134 KEM-KDKGRSPNVFSFHTLIKGSFRERKFEEGTGMAYEMLELGCQFSNVTYEILVDGL 190
>gi|226529334|ref|NP_001142432.1| uncharacterized protein LOC100274616 [Zea mays]
gi|195604246|gb|ACG23953.1| hypothetical protein [Zea mays]
gi|219886145|gb|ACL53447.1| unknown [Zea mays]
gi|413951582|gb|AFW84231.1| hypothetical protein ZEAMMB73_551063 [Zea mays]
Length = 488
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 260/464 (56%), Gaps = 26/464 (5%)
Query: 21 PPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKS 80
P P +PL +PP LP + P+AH + +P+SL L+
Sbjct: 45 PSLPVLPLAVSHLSPPNPLP---VLPSAHAS------------------SPASLFRLLR- 82
Query: 81 KLHHHPQFTHYDFHIFAWASTIDS-FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANP 139
+ HHP+ D HI A+ S FR DH+ + LA+S R L +L + P
Sbjct: 83 RARHHPRLVALDLHILLAAADASSAFRPDHSLTSLVAARLAASRRLPSLQRLLELVLTRP 142
Query: 140 CPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLING 199
CPC++D IF+CPE+ F A+ AF + + A ++R++ D YN+++
Sbjct: 143 CPCADDSIFACPELLPTFRKAIVAFAASGDIPSASHALASLRRVADSPLPAEFYNIILQA 202
Query: 200 FVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ R D A+ FY M RV PDV TFNILIS CR + D A+ F EM+ + C P
Sbjct: 203 LSRLRRHDDAIRFYGEMTSVYRVAPDVHTFNILISSSCRVEGVDAAMRWFGEMQRRSCAP 262
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
VVSFNTL+RGF E ++ EG +A EM+ELG S + EIL+ GLC + L+A EL
Sbjct: 263 TVVSFNTLMRGFIREGRYKEGTKVAREMLELGVGLSVASMEILIGGLCRGSKALEAAELF 322
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN--LPSVIACTTLIEGLR 376
++F GV+P+ FD F +VE LC G A+E VD + ++ S A T++E L
Sbjct: 323 VEFLGDGVVPEGFDCFEVVEALCRGGKVDRAVEAVDMVLERNTKCCMSAPAGATVLECLM 382
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
K E LM +M+ +GI+PDS++ NC+ E LC+ GRT DA++LR+ A KG + DG
Sbjct: 383 EAGKLDEVYRLMWRMIDQGIVPDSISCNCIFEALCEAGRTADANQLRVFAKEKGFEADGE 442
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY +LV G+ R+ +RKEG+ +++EMLD GFIP++A+YN + GL
Sbjct: 443 TYRMLVQGFGRQGKRKEGKAVLDEMLDLGFIPNIASYNRLLGGL 486
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 371 LIEGLRRLRK---GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+++ L RLR+ + G M + + + PD TFN L+ C V A R
Sbjct: 199 ILQALSRLRRHDDAIRFYGEMTSVYR--VAPDVHTFNILISSSCRVEGVDAAMRWFGEMQ 256
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ P ++++ L+ G+ RE R KEG + EML+ G +A+ + GL K++
Sbjct: 257 RRSCAPTVVSFNTLMRGFIREGRYKEGTKVAREMLELGVGLSVASMEILIGGLCRGSKAL 316
>gi|242055339|ref|XP_002456815.1| hypothetical protein SORBIDRAFT_03g043320 [Sorghum bicolor]
gi|241928790|gb|EES01935.1| hypothetical protein SORBIDRAFT_03g043320 [Sorghum bicolor]
Length = 513
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 273/500 (54%), Gaps = 23/500 (4%)
Query: 4 LKKKLPPILIHNKS--PPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHL 61
L ++LP ++ ++ P AP + P T S+ L P+ +L +HL
Sbjct: 7 LARRLPALISRHQRLISPETEAPEL------AEAPTTFASIPLDPS---LPVLSLAVSHL 57
Query: 62 LTPTNNQITPSSLLHFLKSKLH------HHPQFTHYDFHIFAWASTIDS-FRHDHTTFLF 114
P PS+ S L HHP+ D HI A+ S FR DH
Sbjct: 58 SPPNPLPALPSAHASSPASLLRLLRRGRHHPRLAALDLHILLAAADASSAFRPDHGLTSL 117
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174
+ LA+S R + L +L + PCPC++D IF+CPE+ F A+ AF + +
Sbjct: 118 LAARLAASRRLASLQRLLELVLTRPCPCADDSIFACPELLPTFRKAIVAFAASGDIPAAS 177
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILIS 233
A ++R++ D YN++++ + R D + FY M+ RV PD TFNILI+
Sbjct: 178 QALASLRRVADSPLPAEFYNIILHSLSRLRRHDDVIRFYGEMITVYRVAPDAYTFNILIN 237
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR + D A+ F EM+ + C P VSFNTL+RGF E ++ EG+ +A EM+ELG
Sbjct: 238 SSCRVEGVDAAMRWFGEMQRRSCAPTGVSFNTLMRGFIREGRYKEGIKVAREMLELGAGL 297
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S V+ EIL+ GLC LKA E+ ++F GV+P+ FD F LV+ LC G A+E V
Sbjct: 298 SVVSMEILIGGLCRGSEALKAVEVFVEFLGDGVVPEGFDCFELVDALCRGGKVDRAVEAV 357
Query: 354 DELWKKGNLP---SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
D + ++ N+ SV A T++E L + K E LM +M+ +GI+PD+++ NC+ E L
Sbjct: 358 DMVLER-NMKCCLSVPAGVTVLECLMKAGKLDEVCRLMWRMIDQGIVPDTISCNCIFEAL 416
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C GRT DA++LR+ A KG + DG TY +LV G+ R+ +RKEG+ +++EMLD GFIP++
Sbjct: 417 CKAGRTADANQLRVFAKEKGFEADGETYRVLVQGFGRQGKRKEGKAVLDEMLDLGFIPNI 476
Query: 471 ATYNSYMDGLSNARKSVRQT 490
A+YN + GL + + T
Sbjct: 477 ASYNRLLGGLRHVGSIISTT 496
>gi|255575705|ref|XP_002528752.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531846|gb|EEF33664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 371
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 183/221 (82%)
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
GFF ERKFDEGV MAYEMI+LGC+FSSVTCEILVDGL E +VL+AC L+IDFSR+G+LP
Sbjct: 144 GFFRERKFDEGVKMAYEMIDLGCQFSSVTCEILVDGLSRENKVLEACNLLIDFSRKGILP 203
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
FD+ GLV+KLC + N AL ++DELW+ GN+PS+I+CTTLIEGLR++ K E+ LM
Sbjct: 204 CKFDFCGLVDKLCEKKNVDAALYLLDELWRNGNVPSLISCTTLIEGLRKMGKREESFKLM 263
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E+MLKE I+ D VTFNCLL+DLC+VGRTVDAD+LRLLAS+KGL+ D MTY+ LV+GYTRE
Sbjct: 264 ERMLKENIVSDIVTFNCLLQDLCNVGRTVDADKLRLLASSKGLEADDMTYYTLVNGYTRE 323
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
+ KEGE LV+EMLD+ FIPDLATYN MDGL +R S Q
Sbjct: 324 GKWKEGEVLVDEMLDKEFIPDLATYNRLMDGLCKSRSSSTQ 364
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 168/332 (50%), Gaps = 24/332 (7%)
Query: 49 HHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHD 108
+HL FL+TH + ITP +LLHFLKSKLH+HP F+HYD IF WASTIDSFRHD
Sbjct: 51 QQSHLFHFLQTHF---KSKPITPHNLLHFLKSKLHYHPLFSHYDLLIFNWASTIDSFRHD 107
Query: 109 HTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
H+TF ++ R+LA + RF EL S+L F+SANPCPCS F +
Sbjct: 108 HSTFEWMTRTLAITNRFLELTSLLAFMSANPCPCS------------------TGFFRER 149
Query: 169 RMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ ++G+ +A+E + + + S +L++G + + +A R + P
Sbjct: 150 KFDEGVKMAYEMID--LGCQFSSVTCEILVDGLSRENKVLEACNLLIDFSRKGILPCKFD 207
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F L+ C K D AL L E+ G P+++S TLI G K +E + M+
Sbjct: 208 FCGLVDKLCEKKNVDAALYLLDELWRNGNVPSLISCTTLIEGLRKMGKREESFKLMERML 267
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ VT L+ LCN GR + A +L + S +G+ D Y+ LV EG
Sbjct: 268 KENIVSDIVTFNCLLQDLCNVGRTVDADKLRLLASSKGLEADDMTYYTLVNGYTREGKWK 327
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+VDE+ K +P + L++GL + R
Sbjct: 328 EGEVLVDEMLDKEFIPDLATYNRLMDGLCKSR 359
>gi|357126426|ref|XP_003564888.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Brachypodium distachyon]
Length = 493
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 244/423 (57%), Gaps = 6/423 (1%)
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
+P+SLL L HH + A AS +FR DH + LA+S R L
Sbjct: 73 SPASLLRLLHRARHHPRLAALDLHLLLAAASASSAFRPDHRLTSLLAARLAASRRLPSLQ 132
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
+L + + PCPC++D IF+CPE+ F A+ AF + + A ++R+ D
Sbjct: 133 RLLQLVLSRPCPCADDSIFACPELLPTFRKAILAFATSGDIPLASDALASLRRAADSPLP 192
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLF 248
YN+L+ + D A+ FY M RV PD TFNILI+ CR + D A+ F
Sbjct: 193 AEFYNILLQALARLHRHDDAIRFYGEMTNTHRVAPDAYTFNILINTSCRVEGVDAAMRWF 252
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EMR + C PN VSFNTL+RGFF E ++ EG+ +A+EM++LG S + EIL+ GLC
Sbjct: 253 EEMRRRSCAPNGVSFNTLMRGFFREVRYREGIKVAHEMLQLGVGLSVASMEILIGGLCRG 312
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP---SV 365
G LKA E+ +F V+P+ FD GLVE LC G A EVV EL + N+ SV
Sbjct: 313 GEALKAAEVFAEFLVDVVVPEGFDCLGLVESLCHVGRVDKAGEVV-ELVLERNMAYCLSV 371
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
A T+++ L + K E LM++M+ +GI+PD+++ NC+ E LC+ GR+ DA+RLR+L
Sbjct: 372 PAGVTVLDCLLKAGKLDEVCRLMDRMVGQGIVPDTISCNCIFEALCEDGRSSDANRLRML 431
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
A KG D +TY +LV G R+ R EG+ +++EMLD GFIP++ +YN +D + + R+
Sbjct: 432 AKEKGFQADSVTYSMLVQGLGRQGRMNEGKAVLDEMLDLGFIPNIMSYNRLLDRV-HTRR 490
Query: 486 SVR 488
S+R
Sbjct: 491 SLR 493
>gi|115441735|ref|NP_001045147.1| Os01g0908800 [Oryza sativa Japonica Group]
gi|20804895|dbj|BAB92576.1| P0497A05.20 [Oryza sativa Japonica Group]
gi|20804930|dbj|BAB92609.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|56785121|dbj|BAD82759.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|113534678|dbj|BAF07061.1| Os01g0908800 [Oryza sativa Japonica Group]
gi|125573044|gb|EAZ14559.1| hypothetical protein OsJ_04481 [Oryza sativa Japonica Group]
Length = 506
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 243/425 (57%), Gaps = 3/425 (0%)
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
TP++LL L+ HH + A AS +FR DH + LA S R L
Sbjct: 73 TPAALLRILRRARHHPRLAALDLHLLLAAASDSPAFRPDHRLTSLLASRLAESRRLPSLR 132
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
+L + PCPC++D IF+CPE+ F A+ AF + + A ++R+ D
Sbjct: 133 RLLELVLFRPCPCTDDSIFACPELLPTFRKAILAFAASGDIPAASDALASLRRAADSPLP 192
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLF 248
YN++++ + R + + FY M RV PDV TFNILI+ CR + D A+ F
Sbjct: 193 AEFYNIILHALARLRRHEDTVRFYGEMTSTHRVHPDVYTFNILINSSCRAEGVDAAMRWF 252
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+EMR C+P VSFNTL+RGFF E + EG+ +A EM++LG S + EI+++GLC
Sbjct: 253 QEMRRWSCSPTGVSFNTLMRGFFREGRCKEGIKVAREMLQLGFGLSVASMEIMINGLCRG 312
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP--SVI 366
G LKA E+ I+F GV+P+ FD LVE LC N A+EVV+ + ++ + V
Sbjct: 313 GEPLKAAEVFIEFLVDGVVPEGFDCLDLVESLCRVRNVEKAVEVVELILERNWVSCLGVP 372
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A T++E L + K +A +M +M+ I+PD+++ N + E LC+ GRTVDA+RLRL A
Sbjct: 373 AGVTVLECLMKEGKLDKACQMMGRMVAAEIVPDTISCNYIFEALCEAGRTVDANRLRLQA 432
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KG DG TY I+V G+ R+ RKEGE +++EMLD G++P++ATYN +DGL R
Sbjct: 433 KEKGFQADGFTYSIIVQGFGRQGIRKEGEAVLDEMLDAGYVPNIATYNRLLDGLHMGRSM 492
Query: 487 VRQTR 491
Q +
Sbjct: 493 QLQQK 497
>gi|125528785|gb|EAY76899.1| hypothetical protein OsI_04858 [Oryza sativa Indica Group]
Length = 506
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 242/425 (56%), Gaps = 3/425 (0%)
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
TP++LL L+ HH + A AS +FR DH + LA S R L
Sbjct: 73 TPAALLRILRRARHHPRLAALDLHLLLAAASDSPAFRPDHRLTSLLAARLAESRRLPSLR 132
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
+L + PCPC++D IF+CPE+ F A+ AF + + A ++R+ D
Sbjct: 133 RLLELVLFRPCPCTDDSIFACPELLPTFRKAILAFAASGDIPAASDALASLRRAADSPLP 192
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLF 248
YN++++ R + + FY M RV PDV TFNILI+ CR + D A+ F
Sbjct: 193 AEFYNIILHALASLRRHEDTVRFYGEMTSTHRVHPDVYTFNILINSSCRAEGVDAAMRWF 252
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+EMR C+P VSFNTL+RGFF E + EG+ +A EM++LG S + EI+++GLC
Sbjct: 253 QEMRRWSCSPTGVSFNTLMRGFFREGRCKEGIKVAREMLQLGFGLSVASMEIMINGLCRG 312
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP--SVI 366
G LKA E+ I+F GV+P+ FD LVE LC N A+EVV+ + ++ + V
Sbjct: 313 GEPLKAAEVFIEFLVDGVVPEGFDCLDLVESLCRVRNVEKAVEVVELILERNWVSCLGVP 372
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A T++E L + K +A +M +M+ I+PD+++ N + E LC+ GRTVDA+RLRL A
Sbjct: 373 AGVTVLECLMKEGKLDKACQMMGRMVAAEIVPDTISCNYIFEALCEAGRTVDANRLRLQA 432
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KG DG TY I+V G+ R+ RKEGE +++EMLD G++P++ATYN +DGL R
Sbjct: 433 KEKGFQADGFTYSIIVQGFGRQGIRKEGEAVLDEMLDAGYVPNIATYNRLLDGLHMGRSM 492
Query: 487 VRQTR 491
Q +
Sbjct: 493 QLQQK 497
>gi|147794496|emb|CAN62763.1| hypothetical protein VITISV_021813 [Vitis vinifera]
Length = 287
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
Query: 132 LNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS 191
+N + +NPCPCS DGIFSCP+ E IF FA+NAF K ++D +AF M ++IDG+PSV+
Sbjct: 57 INPMVSNPCPCS-DGIFSCPKSEPIFRFALNAFCKVGILDDAEIAFANMGRMIDGKPSVA 115
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
IYN+LING+ CRE +KA+ Y++M++DRVKPDV FN LI CRN LAL +F+EM
Sbjct: 116 IYNILINGYASCREHEKAMAVYEKMIKDRVKPDVFIFNTLIRS-CRNSLSGLALEMFKEM 174
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++KG +PNV SF+TLI+G F ERKF+EG MAYEM+ELGC+FS+VT EILVDGLC EGRV
Sbjct: 175 KDKGRSPNVFSFHTLIKGSFRERKFEEGTGMAYEMLELGCQFSNVTYEILVDGLCREGRV 234
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
L+AC+ +IDFS +G LP FD F L+E LCGE N G ALE VD
Sbjct: 235 LEACDFLIDFSGKGALPNGFDCFCLIEALCGEENVGRALEFVD 277
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 228 FNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
F ++ FC+ D A F M R P+V +N LI G+ R+ ++ + + +M
Sbjct: 81 FRFALNAFCKVGILDDAEIAFANMGRMIDGKPSVAIYNILINGYASCREHEKAMAVYEKM 140
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
I + V P F + L+ + C +
Sbjct: 141 I-----------------------------------KDRVKPDVFIFNTLI-RSCRNSLS 164
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
G+ALE+ E+ KG P+V + TLI+G R RK E +G+ +ML+ G +VT+ L
Sbjct: 165 GLALEMFKEMKDKGRSPNVFSFHTLIKGSFRERKFEEGTGMAYEMLELGCQFSNVTYEIL 224
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++ LC GR ++A + S KG P+G L+ E
Sbjct: 225 VDGLCREGRVLEACDFLIDFSGKGALPNGFDCFCLIEALCGE 266
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
PSV LI G R+ +A + EKM+K+ + PD FN L+ C + A +
Sbjct: 112 PSVAIYNILINGYASCREHEKAMAVYEKMIKDRVKPDVFIFNTLIRS-CRNSLSGLALEM 170
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG P+ ++H L+ G RE + +EG + EML+ G TY +DGL
Sbjct: 171 FKEMKDKGRSPNVFSFHTLIKGSFRERKFEEGTGMAYEMLELGCQFSNVTYEILVDGL 228
>gi|414884086|tpg|DAA60100.1| TPA: hypothetical protein ZEAMMB73_694845 [Zea mays]
Length = 270
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 2/263 (0%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
RV PDV TFNI S CR + D A+ F EM+ + C P VVSFNTL+ GF E ++ EG
Sbjct: 6 RVAPDVHTFNIFFSSSCRVEGVDAAMRWFGEMQRRSCAPTVVSFNTLMCGFIREGRYKEG 65
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+A EM+ELG S + EIL+ GLC + L+A EL ++F GV+ + FD F LVE
Sbjct: 66 TKVAREMLELGVGLSVASMEILIGGLCCGSKALEAAELFVEFLGDGVVLEGFDCFELVEA 125
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACT--TLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC G +E VD + ++ + A T T++E L K E LM +M+ +GI+
Sbjct: 126 LCRGGKVDRVVEAVDMVLERNTKCCLSAPTGATVLECLMEAGKLDEVYRLMWRMIDQGIV 185
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
D+++ NC+ E LC+ GRT DA++LR+LA KG + DG TY +LV G+ R+ +RKEG+ +
Sbjct: 186 LDTISCNCIFEALCEAGRTADANQLRVLAKEKGFEADGETYCMLVQGFGRQGKRKEGKAV 245
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
++EMLD GFIP++A+YN + GL
Sbjct: 246 LDEMLDLGFIPNIASYNRLLGGL 268
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 5/232 (2%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SC F+ + F++ R +G M +L G SV+ +LI G + +
Sbjct: 41 SCAPTVVSFNTLMCGFIREGRYKEGTKVAREMLELGVG-LSVASMEILIGGLCCGSKALE 99
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL---ALGLFREMREKGCNPNVVSFNT 265
A + + D V + L+ CR K D A+ + E R C + + T
Sbjct: 100 AAELFVEFLGDGVVLEGFDCFELVEALCRGGKVDRVVEAVDMVLE-RNTKCCLSAPTGAT 158
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++ K DE + + MI+ G +++C + + LC GR A +L + +G
Sbjct: 159 VLECLMEAGKLDEVYRLMWRMIDQGIVLDTISCNCIFEALCEAGRTADANQLRVLAKEKG 218
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
Y LV+ +G V+DE+ G +P++ + L+ GL +
Sbjct: 219 FEADGETYCMLVQGFGRQGKRKEGKAVLDEMLDLGFIPNIASYNRLLGGLHK 270
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%)
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD TFN C V A R + P ++++ L+ G+ RE R KEG
Sbjct: 7 VAPDVHTFNIFFSSSCRVEGVDAAMRWFGEMQRRSCAPTVVSFNTLMCGFIREGRYKEGT 66
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ EML+ G +A+ + GL K++
Sbjct: 67 KVAREMLELGVGLSVASMEILIGGLCCGSKAL 98
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 199/417 (47%), Gaps = 17/417 (4%)
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
TP L+ L+ + +F WAS +F + + I+R L + F +
Sbjct: 63 TPKQLIETLRRQTDEVAAL-----RVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117
Query: 130 SVLNFISANPCPCSNDGIFSCPEMER-IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
VL + + C E +R IF V ++ K ++ + + M +P
Sbjct: 118 RVLEEMKLSGC-----------EFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKP 166
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
YNVL+N V + + MVR R++ DV TFNILI C+ + A+ +
Sbjct: 167 DTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMM 226
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM G +P+ +F T+++G+ D + + +M+E GC + VT +L++G C +
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ 286
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ +A + + G P F Y LV LC G+A A+EVVD + G P +
Sbjct: 287 GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTY 346
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+LI GL +L + EA ++++M+ P++VT+N ++ LC R +A + L ++
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ PD T++ L+ G + K +L EM +G PD TYN +D L ++RK
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 164/337 (48%), Gaps = 3/337 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
+ CP + + +N F K R++ L + + +G RP YN L+NG K
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQ--EAVSEGFRPDQFTYNTLVNGLCKIGHA 324
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
A+ D M+ + PD+ T+N LISG C+ + + A+ + +M + C+PN V++N +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I E + DE +A + G T L+ GLC A +L + +G
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F Y L++ LC AL ++ E+ G +V+ TLI+G + ++ EA
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M +G+ DSVT+N L++ LC R DA +L +GL PD TY+ L++ +
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFC 564
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ K+ ++V M G PD+ TY + + GL A
Sbjct: 565 KTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKA 601
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ VN K + +AM L+ G P + YN LI+G K E ++A+ D+
Sbjct: 311 YNTLVNGLCKIGHAKHAMEVVDAM--LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQ 368
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV P+ VT+N +IS C+ + D A + R + KG P+V +FN+LI+G
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+++ EM GC T +L+D LC+ ++ +A L+ + G Y
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C A E+ DE+ +G + TLI+GL + ++ +A+ LM++M+ EG
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+N LL C G A + ++ G +PD +TY L+SG + R +
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L+ + +G + YN + L
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQAL 633
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 136/299 (45%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P+ YN +I+ K D+A + + PDV TFN LI G C + A
Sbjct: 373 DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSA 432
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ LF EM+ KGC P+ ++N LI RK +E +N+ EM GC + V L+DG
Sbjct: 433 MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C R+ +A E+ + +GV Y L++ LC A +++D++ +G P
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+L+ + +A+ +++ M G PD VT+ L+ LC GR A RL
Sbjct: 553 KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLR 612
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG+ Y+ ++ + NR E L EMLD+ PD TY GL N
Sbjct: 613 SIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 154/327 (47%), Gaps = 6/327 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +++ K NR+++ A E R L P V +N LI G A+ ++
Sbjct: 381 YNAIISSLCKENRVDE---ATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +PD T+N+LI C ++K + AL L +EM GC NVV +NTLI GF +
Sbjct: 438 EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNK 497
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E + EM G SVT L+DGLC RV A +L+ G+ P F Y
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYN 557
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G+ A ++V + G P ++ TLI GL + + AS L+ + +
Sbjct: 558 SLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKE 453
G++ +N +++ L RT +A RL K PD +TY I+ G E
Sbjct: 618 GMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGE 677
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
+ EM++ G IP+ +++ +GL
Sbjct: 678 AVDFTVEMIERGNIPEFSSFVMLAEGL 704
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 152/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A KA+++ +L E M P + + ++ G+++ D AL ++M
Sbjct: 206 FNILIKALCKAHQVRPAILMMEEMPSY-GLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V VT N+LI+GFC+ + D AL +E +G P+ ++NTL+ G
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M+ G + T L+ GLC G + +A +++ R P Y +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC E A E+ L KG LP V +LI+GL A L E+M +G
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+N L++ LC + +A L G + + Y+ L+ G+ + R +E E
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +EM +G D TYN+ +DGL +++
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKR 533
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 2/263 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C E ++ +++ + ++ + L + M +L +V IYN LI+GF K + ++A
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKEM-ELNGCARNVVIYNTLIDGFCKNKRIEEA 502
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+D M V D VT+N LI G C++K+ + A L +M +G P+ ++N+L+
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTH 562
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + ++ M GC VT L+ GLC GRV A L+ +G++
Sbjct: 563 FCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLT 622
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV-EASGLM 388
Y +++ L A+ + E+ K P I + GL + EA
Sbjct: 623 PHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFT 682
Query: 389 EKMLKEGILPDSVTFNCLLEDLC 411
+M++ G +P+ +F L E LC
Sbjct: 683 VEMIERGNIPEFSSFVMLAEGLC 705
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 118/271 (43%), Gaps = 12/271 (4%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R D T+ ++ SL SS + E ++L + N C I++ ++ F
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN----------GCARNVVIYNTLIDGFC 494
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
K R+ + F+ M R SV+ YN LI+G K + + A D+M+ + ++PD
Sbjct: 495 KNKRIEEAEEIFDEMELQGVSRDSVT-YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N L++ FC+ A + + M GCNP++V++ TLI G + +
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-GEG 344
+ G + ++ L R +A L + + P Y + LC G G
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGG 673
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
G A++ E+ ++GN+P + L EGL
Sbjct: 674 PIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ +VR+L + R E V+ + C ++ V AF +A +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGA----------GCAPNAVTYNTLVAAFCRAGEL 203
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ MR+ + +P++ +N ++NG K + A +D MVR+ + PDVV++N
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+SG+C+ +L +F EM ++G P+VV+F +LI ++ V + +M E G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT L+DG C +G + A V + + G+ P Y L+ C G +A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E++ E+ K P V+ +T+I G ++ A L +KMLK+G+LPD++T++ L+ L
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C+ R DA L G+ PD TY L+ G+ +E ++ +L +EM+ +G +PD+
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 471 ATYNSYMDGLSNARKSVRQTR 491
TY+ ++GLS + ++ R
Sbjct: 504 VTYSVLINGLSKSARTKEAHR 524
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN KA RM F+ M + +G P V YN L++G+ K ++L +
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVR--EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + + PDVVTF LI C+ + A+ L +MRE+G N V+F LI GF +
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + EM + G + S V L++G C GR+ A EL+ + + V P Y
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C GN A ++ ++ KKG LP I ++LI GL ++ +A L E ML+ G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L++ C G A L KG+ PD +TY +L++G ++ R KE
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR-KSV 487
L+ ++ E +PD Y++ M S A KSV
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 16/339 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A KA + + MR+ R + + LI+GF K D AL + M
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRER-GLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++P VV +N LI+G+C+ + DLA L REM K P+VV+++T+I G+
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + +M++ G ++T L+ GLC E R+ ACEL + + GV P +F Y L
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EGN AL + DE+ +KG LP V+ + LI GL + + EA L+ K+ E
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 397 LPDSVTFNCL---------------LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+PD++ ++ L L+ C G +AD++ + DG Y IL
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G+ R ++ + +ML GF P+ + S + GL
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 142/317 (44%), Gaps = 51/317 (16%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F K ++D LLA E MRK +PSV YN LING+ K D A
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRK-CGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M RVKPDVVT++ +ISG+C+ D A L ++M +KG P+ +++++LIRG E
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ + M++LG + T L+DG C EG V KA L + R+GVLP Y
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI--------EGLRRLRKGVEAS 385
L+ L A ++ +L+ + +P I L+ + + L KG
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566
Query: 386 GLME------------------------------------------KMLKEGILPDSVTF 403
GLM+ +ML+ G P+S +
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 626
Query: 404 NCLLEDLCDVGRTVDAD 420
L+ L + G V+AD
Sbjct: 627 ISLVRGLFEEGMVVEAD 643
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+ND FE M +L +P Y LI+G K +KAL +D M+R
Sbjct: 440 IRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL-------------- 266
V PDVVT+++LI+G ++ + A L ++ + P+ + ++ L
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 558
Query: 267 -IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++GF + E + M++ + IL+ G C G V KA R G
Sbjct: 559 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 618
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
P LV L EG A + +L L A LI+
Sbjct: 619 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 37/171 (21%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
L+ GF +A Y M+ K D ++ILI G CR AL ++M
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G +PN S +L+RG F E E N +++ TC L D +A
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL---------TCCPLADA--------EA 660
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+ +ID +R+ + DYF + E+W + PSV
Sbjct: 661 SKALIDLNRK----EGMDYF----------------QAQGEIWYSESSPSV 691
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ +VR+L + R E V+ + C ++ V AF +A +
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGA----------GCAPNAVTYNTLVAAFCRAGEL 203
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ MR+ + +P++ +N ++NG K + A +D MVR+ + PDVV++N
Sbjct: 204 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+SG+C+ +L +F EM ++G P+VV+F +LI ++ V + +M E G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT L+DG C +G + A V + + G+ P Y L+ C G +A
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E++ E+ K P V+ +T+I G ++ A L +KMLK+G+LPD++T++ L+ L
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C+ R DA L G+ PD TY L+ G+ +E ++ +L +EM+ +G +PD+
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503
Query: 471 ATYNSYMDGLSNARKSVRQTR 491
TY+ ++GLS + ++ R
Sbjct: 504 VTYSVLINGLSKSARTKEAHR 524
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN KA RM F+ M + +G P V YN L++G+ K ++L +
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVR--EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + + PDVVTF LI C+ + A+ L +MRE+G N V+F LI GF +
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + EM + G + S V L++G C GR+ A EL+ + + V P Y
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C GN A ++ ++ KKG LP I ++LI GL ++ +A L E ML+ G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L++ C G A L KG+ PD +TY +L++G ++ R KE
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR-KSV 487
L+ ++ E +PD Y++ M S A KSV
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 16/339 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A KA + + MR+ R + + LI+GF K D AL + M
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRER-GLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++P VV +N LI+G+C+ + DLA L REM K P+VV+++T+I G+
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + +M++ G ++T L+ GLC E R+ ACEL + + GV P +F Y L
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EGN AL + DE+ +KG LP V+ + LI GL + + EA L+ K+ E
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 397 LPDSVTFNCL---------------LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+PD++ ++ L L+ C G +AD++ + DG Y IL
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G+ R ++ + +ML GF P+ + S + GL
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 142/317 (44%), Gaps = 51/317 (16%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F K ++D LLA E MRK +PSV YN LING+ K D A
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEMRK-CGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M RVKPDVVT++ +ISG+C+ D A L ++M +KG P+ +++++LIRG E
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ + M++LG + T L+DG C EG V KA L + R+GVLP Y
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI--------EGLRRLRKGVEAS 385
L+ L A ++ +L+ + +P I L+ + + L KG
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 566
Query: 386 GLME------------------------------------------KMLKEGILPDSVTF 403
GLM+ +ML+ G P+S +
Sbjct: 567 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 626
Query: 404 NCLLEDLCDVGRTVDAD 420
L+ L + G V+AD
Sbjct: 627 ISLVRGLFEEGMVVEAD 643
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 18/256 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+ND FE M +L +P Y LI+G K +KAL +D M+R
Sbjct: 440 IRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL-------------- 266
V PDVVT+++LI+G ++ + A L ++ + P+ + ++ L
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 558
Query: 267 -IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++GF + E + M++ + IL+ G C G V KA R G
Sbjct: 559 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 618
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA- 384
P LV L EG A + +L L A LI+ L R V+A
Sbjct: 619 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID-LNRKEGNVDAL 677
Query: 385 SGLMEKMLKEGILPDS 400
++ M ++G+LP S
Sbjct: 678 IDVLCGMARDGLLPSS 693
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 183/371 (49%), Gaps = 44/371 (11%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKAL 210
ER ++ VN KA + A+E ++++ DG+ P + Y+ +INGF K E D+A
Sbjct: 41 ERTYNVVVNGLCKARLTSK---AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 97
Query: 211 GFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
MV RD + PDVVT+ ++ G CR+ K D A + REM+ KG P+ +F+ LI G
Sbjct: 98 EILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 157
Query: 270 FFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ RK DE + + E++ + VT L+DG C G + KA +++ R +P
Sbjct: 158 WCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVP 217
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L+ LC G+ AL++ + KG +P+V+ TTLI GL K A LM
Sbjct: 218 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 277
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-------------------------- 422
++M PD+V++N LL+ C +GR +A +L
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337
Query: 423 -RL---------LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
RL + + G+DPD +TY I+V+GY+R R E + EM+ P+ T
Sbjct: 338 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397
Query: 473 YNSYMDGLSNA 483
Y+S +DGL A
Sbjct: 398 YSSLIDGLCKA 408
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + + A ++++ L ++ + +P V Y LI+GF K +KA+ M
Sbjct: 151 FSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 210
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+VVT++ L+ G C+ D AL LFR M KGC PNVV++ TLI G K
Sbjct: 211 EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 270
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + EM C +V+ L+DG C GR+ +A +L + + + LP Y L
Sbjct: 271 DAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCL 330
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
V C A +++ + + P V+ + ++ G R ++ VEA+ +++M+
Sbjct: 331 VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 390
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P++VT++ L++ LC GR A + K ++P T++ ++ R E
Sbjct: 391 VAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 450
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLS 481
L+ M G P + TY + ++G S
Sbjct: 451 KLLVAMAAHGLEPGMVTYTTLLEGFS 476
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 169/341 (49%), Gaps = 41/341 (12%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
++ +P+V + ++I+GF K + +AL +++M R+ V P+ T+N++++G C+ +
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSK 59
Query: 244 ALGLFREMRE-KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL-GCEFSSVTCEIL 301
A + +EMR+ K P++V+++T+I GF + + D + EM+ G VT +
Sbjct: 60 AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL----- 356
VDGLC +G++ +ACE+V + +GV P F + L+ C AL++ E+
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179
Query: 357 W---------------KKGNL----------------PSVIACTTLIEGLRRLRKGVEAS 385
W K GNL P+V+ ++L+ GL + +A
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDPDGMTYHILVSG 444
L +M +G +P+ VT+ L+ LC VDA RL + T PD ++Y+ L+ G
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLC-AAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y R R +E + L EM + +PD TY + G NA +
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR 339
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 134/316 (42%), Gaps = 12/316 (3%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA 160
T S++ D T+ ++ S + +L + C P + +
Sbjct: 176 TSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV---------PNV-VTYSSL 225
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ KA ++ L F M P+V Y LI+G + D A D M
Sbjct: 226 LHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 284
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD V++N L+ G+CR + + A LF+EM K C P+ +++ L+RGF + +E
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEAR 344
Query: 281 NMAYEM-IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M G + VT I+V G R ++A E + + R V P Y L++
Sbjct: 345 FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDG 404
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A+EV+ + K PSV ++I L RL EA L+ M G+ P
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 464
Query: 400 SVTFNCLLEDLCDVGR 415
VT+ LLE GR
Sbjct: 465 MVTYTTLLEGFSRTGR 480
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V F A+R+ + E M+ P V Y++++ G+ + + F +A F M+
Sbjct: 331 VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 390
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+ VT++ LI G C+ + D A+ + + M K P+V +FN++I DE
Sbjct: 391 VAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 450
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL--------VIDFSRRGVLPKDFD 332
+ M G E VT L++G GR+ A EL S ++P+
Sbjct: 451 KLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA- 509
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L+ LC A+ VV+EL + P+ C +++GL R + EA L+ +
Sbjct: 510 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 569
Query: 393 KEGI 396
K G+
Sbjct: 570 KVGL 573
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 193/381 (50%), Gaps = 10/381 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ +VR+L + R E V+ + C ++ V AF +A +
Sbjct: 12 TYNILVRALCARGRLEEAVGVVGDMRGA----------GCAPNAVTYNTLVAAFCRAGEL 61
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ MR+ + +P++ +N ++NG K + A +D MVR+ + PDVV++N
Sbjct: 62 DGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 121
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+SG+C+ +L +F EM ++G P+VV+F +LI ++ V + +M E G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT L+DG C +G + A V + + G+ P Y L+ C G +A
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E++ E+ K P V+ +T+I G ++ A L +KMLK+G+LPD++T++ L+ L
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C+ R DA L G+ PD TY L+ G+ +E ++ +L +EM+ +G +PD+
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361
Query: 471 ATYNSYMDGLSNARKSVRQTR 491
TY+ ++GLS + ++ R
Sbjct: 362 VTYSVLINGLSKSARTKEAHR 382
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN KA RM F+ M + +G P V YN L++G+ K ++L +
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVR--EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + + PDVVTF LI C+ + A+ L +MRE+G N V+F LI GF +
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + EM + G + S V L++G C GR+ A EL+ + + V P Y
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C GN A ++ ++ KKG LP I ++LI GL ++ +A L E ML+ G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L++ C G A L KG+ PD +TY +L++G ++ R KE
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR-KSV 487
L+ ++ E +PD Y++ M S A KSV
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 414
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 16/339 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A KA + + MR+ R + + LI+GF K D AL + M
Sbjct: 154 FTSLIHATCKAGNLEQAVALVAQMRER-GLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++P VV +N LI+G+C+ + DLA L REM K P+VV+++T+I G+
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 272
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + +M++ G ++T L+ GLC E R+ ACEL + + GV P +F Y L
Sbjct: 273 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 332
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EGN AL + DE+ +KG LP V+ + LI GL + + EA L+ K+ E
Sbjct: 333 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392
Query: 397 LPDSVTFNCL---------------LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+PD++ ++ L L+ C G +AD++ + DG Y IL
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G+ R ++ + +ML GF P+ + S + GL
Sbjct: 453 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 5/301 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+L+ ++A+G M P+ VT+N L++ FCR + D A +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 248 FREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
MRE+G PN+V+FN+++ G + + + EM+ G V+ L+ G C
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + ++ + + ++RG++P + L+ C GN A+ +V ++ ++G + +
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 367 ACTTLIEGLRRLRKGVEASGLM--EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T LI+G +KG L+ E+M K GI P V +N L+ C +GR A L
Sbjct: 188 TFTALIDGF--CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
K + PD +TY ++SGY + L +ML +G +PD TY+S + GL +
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305
Query: 485 K 485
+
Sbjct: 306 R 306
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 142/317 (44%), Gaps = 51/317 (16%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F K ++D LLA E MRK +PSV YN LING+ K D A
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRK-CGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M RVKPDVVT++ +ISG+C+ D A L ++M +KG P+ +++++LIRG E
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ + M++LG + T L+DG C EG V KA L + R+GVLP Y
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI--------EGLRRLRKGVEAS 385
L+ L A ++ +L+ + +P I L+ + + L KG
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424
Query: 386 GLME------------------------------------------KMLKEGILPDSVTF 403
GLM+ +ML+ G P+S +
Sbjct: 425 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTST 484
Query: 404 NCLLEDLCDVGRTVDAD 420
L+ L + G V+AD
Sbjct: 485 ISLVRGLFEEGMVVEAD 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 18/256 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+ND FE M +L +P Y LI+G K +KAL +D M+R
Sbjct: 298 IRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL-------------- 266
V PDVVT+++LI+G ++ + A L ++ + P+ + ++ L
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 416
Query: 267 -IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++GF + E + M++ + IL+ G C G V KA R G
Sbjct: 417 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 476
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA- 384
P LV L EG A + +L L A LI+ L R V+A
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID-LNRKEGNVDAL 535
Query: 385 SGLMEKMLKEGILPDS 400
++ M ++G+LP S
Sbjct: 536 IDVLCGMARDGLLPSS 551
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 202/420 (48%), Gaps = 24/420 (5%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSE-LHSVLNFISANP------------CPC 142
F WA++ + + HD T ++++L R + L N + +P C
Sbjct: 831 FDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRA 890
Query: 143 SNDGI----------FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
+ G P+ + + + A +++ L F+ M + P V
Sbjct: 891 GDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFT 950
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+ +++ VK + D A + MV P+VVT++ L+ G C+ K D A L + M
Sbjct: 951 YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
GC+PN+V++NT+I G + DE ++ EM++ GC+ + VT +L+D C G+
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A LV +G +P F Y L++ C + A +++ + +KG +P+V++ T+I
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 1130
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL + K E L+E+ML +PD VTFN +++ +C R A L L G
Sbjct: 1131 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 1190
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEML-DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
P+ +TY+ LV G + R + E L+ EM +G PD+ TYN+ +DGL +++ R +
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 190/418 (45%), Gaps = 33/418 (7%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL--------------------NFI 135
F WA T D ++H+ ++ L ++++S+ H + FI
Sbjct: 113 FEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFI 172
Query: 136 SANPCPCSNDGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
A + + +F EM R + + A + +D +L F M K
Sbjct: 173 RAGKILPAYE-LFD--EMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-- 227
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +ING K D A+ + MV + P+V ++N ++ GFC+ + + AL L
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M +GC P+VVS+ T+I G + DE + +MI+ GC+ + +T LVDG C
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A ELV + RG P Y ++ C + A +V+ + + G P I
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+T+I G + K EA L+E+M++ G PD + L++ LC A L ++
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD + Y IL+ + R E E+ ++ M+ PD+ TYNS +DGL +R+
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRR 525
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 166/332 (50%), Gaps = 11/332 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ F KANR+ + L E M + G P V Y +ING K + D+A D+
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQM--VTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDK 325
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P+V+T+ L+ GFCR D A+ L R+M E+G PN +++N ++ F
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRND 385
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + MI+ GC ++ ++ G C G++ +A +L+ RRG P
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST 445
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC A E++ P V+A + LI L + ++ EA ++ M+K
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
PD VT+N +++ LC R DA DR+R G+ PD +TY I++ + ++N
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR----AAGVMPDVVTYSIVIHSFCKDNNL 561
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ M + +PD+ TY++ ++GL A
Sbjct: 562 DSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 170/365 (46%), Gaps = 41/365 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ K R+++ A+ + +++DG +P+V Y VL++ F KC + + A+G +
Sbjct: 1021 YNTIIDGHCKLGRIDE---AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV P++ T+N L+ FC+ + + A L M +KGC PNVVS+NT+I G
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 1137
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K EGV + +M+ C VT ++D +C RV A EL G P Y
Sbjct: 1138 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 1197
Query: 335 GLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV LC A ++ E+ +K G P +I T+I+GL + ++ A L +ML
Sbjct: 1198 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 1257
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY-------- 445
+G+ PD VT++ ++ LC +A+ + L G DP +TY L+ G+
Sbjct: 1258 DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDK 1317
Query: 446 ---------------------------TRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
++ R ++ L+ ML G +PD TYN+ +
Sbjct: 1318 ALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 1377
Query: 479 GLSNA 483
G +A
Sbjct: 1378 GFCDA 1382
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 154/316 (48%), Gaps = 37/316 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +I G K + + + ++M+ + PD+VTFN +I C+ + D+A L
Sbjct: 1121 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 1180
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLC 306
F ++E GC PN+V++N+L+ G R+FD+ + EM + GC +T ++DGLC
Sbjct: 1181 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 1240
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDY--------------------------------- 333
RV +A +L + G+ P D Y
Sbjct: 1241 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 1300
Query: 334 -FG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+G L++ C GN ALE++ L KG+ P V+ + I+ L + + +A L+E M
Sbjct: 1301 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L+ G++PD+VT+N LL+ CD T DA L + G +PD TY LV +
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 1420
Query: 452 KEGENLVNE-MLDEGF 466
K+ V++ M+D GF
Sbjct: 1421 KDLLAEVSKSMVDTGF 1436
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 144/303 (47%), Gaps = 40/303 (13%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++A KA ++ A E +R I D P V Y++LI+ K + +A + D MV+
Sbjct: 447 IDALCKAAAIDS---AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVK 503
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+R PDVVT+N ++ G C++++ + A LF MR G P+VV+++ +I F + D
Sbjct: 504 NRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDS 563
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
M M E C VT L++GLC + G + K FD F
Sbjct: 564 AFKMLERMKEAKCVPDVVTYSALINGLC----------------KAGTVDKAFDVF---- 603
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
E+ G P+++ TLI+GL ++ K +A+ ++E M K+ P
Sbjct: 604 ---------------QEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTP 648
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
DS+T+ CL+ LC+ R +A R+ KG PD MTY L+ + N + E L+
Sbjct: 649 DSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLL 708
Query: 459 NEM 461
EM
Sbjct: 709 KEM 711
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 2/315 (0%)
Query: 169 RMNDGLLAFEAMRKLID-GRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R ND A + ++ +I G P +I Y+ +I+GF K + +A ++M+R +PDV
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVA 441
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+ LI C+ D A L R C P+VV+++ LI ++ E + M
Sbjct: 442 CLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVM 501
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
++ C VT +VDGLC R+ A L GV+P Y ++ C + N
Sbjct: 502 VKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNL 561
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++++ + + +P V+ + LI GL + +A + ++ML G P+ VT+N L
Sbjct: 562 DSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTL 621
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ LC + + A + + + PD +TY L++G +R +E ++ EM D+G
Sbjct: 622 IDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGC 681
Query: 467 IPDLATYNSYMDGLS 481
+PD TY + + L
Sbjct: 682 LPDRMTYGTLLRALQ 696
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TF I+ ++ +YR + + N I + C P + ++ V+ K+
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT---------PNLV-TYNSLVHGLCKS 1206
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R + M + P + YN +I+G K + D+A + +M+ D + PD VT
Sbjct: 1207 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 1266
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++I+IS C+ + D A + M + G +P +++ TLI GF D+ + + ++
Sbjct: 1267 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 1326
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G VT I +D L GR+ +A EL+ R G++P Y L++ C
Sbjct: 1327 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTE 1386
Query: 348 IALEVVDELWKKGNLPSVIACTTLI 372
A+++ + + + G P TTL+
Sbjct: 1387 DAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLA 244
G+ + ++ ++ G R D ALGF+D ++ D T N L+ R K+ A
Sbjct: 807 GKLTTTVVGKVLQGV---RNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDA 863
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L ++R + C+PN+ +F IL+ G
Sbjct: 864 LQVYRN--KLCCSPNMFTFT-----------------------------------ILIHG 886
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP- 363
LC G + A EL+ + R GV + +++ LC ALE+ E+ + G+ P
Sbjct: 887 LCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPP 946
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V +T+++ L + K +A L+E M+ +G P+ VT++ LL LC G+ +A L
Sbjct: 947 DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ G P+ +TY+ ++ G+ + R E +L+ EM+D G P++ TY +D
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066
Query: 484 RKS 486
K+
Sbjct: 1067 GKA 1069
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 35/312 (11%)
Query: 209 ALGFYDRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
AL F++ RD + ++ N L++ + ++ A LFR E + V+++TLI
Sbjct: 109 ALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLI 168
Query: 268 RGFFGERK-------FDE----------GVN-----------------MAYEMIELGCEF 293
GF K FDE GV+ + + + C
Sbjct: 169 SGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPP 228
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
SVT +++GL R+ A L+ + G P F Y ++ C AL ++
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 288
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+++ +G P V++ TT+I GL +L + EA +M+KM++ G P+ +T+ L++ C V
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 348
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L + +G P+ +TY+ ++ + R N + ++ M+ G PD Y
Sbjct: 349 GDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINY 408
Query: 474 NSYMDGLSNARK 485
++ + G A K
Sbjct: 409 STIISGFCKAGK 420
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ F K D FE M D R +V +++ ++ +V ++ ++A G + M +
Sbjct: 1463 VDMFGKCGSPQDARKVFEGM----DQR-NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEG 1517
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEG 279
V+PD VTF L++ C D A+ F + R+ G P V F+ +I G
Sbjct: 1518 VEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVI-DLLGRLGL--- 1573
Query: 280 VNMAYE-MIELGCEFSSVTCEILVDG--LCNE-GRVLKACEL 317
VN A + M+ + C+ S+ T L+ +C + R L+ EL
Sbjct: 1574 VNEAEDLMLGMPCKPSAATWNCLLSAYKICGDFERALRVAEL 1615
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K +++N+ L F + K RP+V +N LING+ K D+ M
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM 286
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +RV PDV T+++LI+G C+ + D A LF EM ++G PN V+F TLI G +
Sbjct: 287 MENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRA 346
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D G+ + +M+ G + +T L++GLC G + +A +LVI+ ++RG+ P F Y L
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ ALE+ E+ K+G +A T LI G R + +EA + +ML+ GI
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ ++ C G +L G P +TY++L++G ++ + K
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L++ ML+ G +PD TYN ++G
Sbjct: 527 LLDAMLNLGVVPDDITYNILLEG 549
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N K +++D F M R L+ P+ + LING D + Y
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLV---PNDVTFTTLINGHCVTGRADLGMEIYQ 354
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+R VKPDV+T+N LI+G C+ A L EM ++G P+ ++ LI G E
Sbjct: 355 QMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEG 414
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + EM++ G E +V L+ G C EG+V++A + + G+ P D Y
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C +G+ +++ E+ G++P V+ L+ GL + + A+ L++ ML
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNL 534
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G++PD +T+N LLE C G D D+L+ S KGL D +Y L+ + + ++
Sbjct: 535 GVVPDDITYNILLEGHCKHGNREDFDKLQ---SEKGLVQDYGSYTSLIGDLRKTCKERQ 590
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 194/466 (41%), Gaps = 69/466 (14%)
Query: 41 SVTLTPTAH-HTHLLRFLKT----HLLTPTN---NQITPSSLLHFLKSKLHHHPQFTHYD 92
++ ++PT H+ L R L + HL+ N + ++P SLL F
Sbjct: 45 AIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSF--------------- 89
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F W ST FR ++ + L + SE S+L F+ + S +F+
Sbjct: 90 ---FKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVL 146
Query: 153 MER-------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
R +F +NA+ + +D + F +RK P S L + +K
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSC-GYLFDRLMKLNL 205
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A FY+ ++ PDV FN+L+ C+ K + A LF E+ ++G P VVSFNT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G+ D+G + M+E
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMME-----------------------------------NR 290
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P F Y L+ LC EG A ++ E+ +G +P+ + TTLI G +
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ ++ML++G+ PD +T+N L+ LC VG +A +L + + +GL PD TY +L+ G
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+E + + EM+ EG D + + + G + + R
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 176/330 (53%), Gaps = 1/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K +++N+ L F + K RP+V +N LING+ K D+ M
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM 286
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +RV PDV T+++LI+G C+ + D A LF EM ++G PN V+F TLI G +
Sbjct: 287 MENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRA 346
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D G+ + +M+ G + +T L++GLC G + +A +LVI+ ++RG+ P F Y L
Sbjct: 347 DLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTML 406
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ ALE+ E+ K+G +A T LI G R + +EA + +ML+ GI
Sbjct: 407 IDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGI 466
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ ++ C G +L G P +TY++L++G ++ + K
Sbjct: 467 KPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANM 526
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L++ ML+ G +PD TYN ++ A K
Sbjct: 527 LLDAMLNLGVVPDDITYNILLERTLQAWKQ 556
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 215/489 (43%), Gaps = 67/489 (13%)
Query: 41 SVTLTPTAH-HTHLLRFLKT----HLLTPTN---NQITPSSLLHFLKSKLHHHPQFTHYD 92
++ ++PT H+ L R L + HL+ N + ++P SLL F
Sbjct: 45 AIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSF--------------- 89
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F W ST FR ++ + L + SE S+L F+ + S +F+
Sbjct: 90 ---FKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVL 146
Query: 153 MER-------IFHFAVNAFVKANRMNDGLLAFEAMRK----------------------- 182
R +F +NA+ + +D + F +RK
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206
Query: 183 ---------LIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
++D P V +NVL++ K + ++A + + + ++P VV+FN L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I+G+C++ D L R M E P+V +++ LI G E + D+ + EM + G
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT L++G C GR E+ R+GV P Y L+ LC G+ A +
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+V E+ ++G P T LI+G + A + ++M+KEGI D+V F L+ C
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC 446
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G+ ++A+R G+ PD TY +++ G+ ++ K G L+ EM +G +P +
Sbjct: 447 REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVV 506
Query: 472 TYNSYMDGL 480
TYN ++GL
Sbjct: 507 TYNVLLNGL 515
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 170/328 (51%), Gaps = 18/328 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N KA +N + F+ M + G RP+ Y LINGF + D+A +D M+R
Sbjct: 350 INTMCKAGNLNRAMEFFDQMH--VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS 407
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P +VT+N L++G C + + + A+GL R M KG +P+VVS++T+I GF ++ D
Sbjct: 408 GFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRA 467
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M EM+E G ++T L+ GLC + R+ +AC+L + + +LP +F Y L+
Sbjct: 468 FQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLING 527
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ AL + DE+ KKG LP + LI GL + + EA L+ K+ + +P+
Sbjct: 528 YCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPN 587
Query: 400 SVTFNCLLEDLCDV---------------GRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+T++ L+E D+ G +AD++ + P+ Y++++ G
Sbjct: 588 GITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ R+ + L EM+D GFIP T
Sbjct: 648 HCRDGNVHKAHKLYKEMVDFGFIPHTVT 675
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 2/314 (0%)
Query: 174 LLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+ A + R++I S+++ YN+LI GF + L F++ M R+R P+VVT+N +
Sbjct: 185 IFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTV 244
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I +C+ K+ D A L R M +G PN++++N +I G + +E + EM G
Sbjct: 245 IGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGF 304
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
VT LV+G C G +A L + R G+ P Y L+ +C GN A+E
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
D++ +G P+ + T+LI G + EA + ++M++ G P VT+N LL C
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
GR +A L KGL PD ++Y +++G+ R + EM+++G PD
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484
Query: 472 TYNSYMDGLSNARK 485
TY+S + GL R+
Sbjct: 485 TYSSLIQGLCEQRR 498
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 5/328 (1%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + R+ + G+LA E RK P YN L+NG+ K F +AL +
Sbjct: 276 YNMVINGLCRVGRIEETSGVLA-EMDRKGF--APDGVTYNTLVNGYCKVGNFHQALVLHS 332
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+R+ + PDVVT+ LI+ C+ + A+ F +M +G PN V++ +LI GF +
Sbjct: 333 EMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKG 392
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + EMI G + VT L++G C GR+ +A L+ +G+ P Y
Sbjct: 393 FMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYS 452
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C A ++ E+ +KG P I ++LI+GL R+ EA L ++ML +
Sbjct: 453 TIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK 512
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+LPD T+ L+ C G +A L KG PD +TY++L++G ++ R +E
Sbjct: 513 SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ L+ ++ + IP+ TY++ ++ S+
Sbjct: 573 KRLLLKLFYDESIPNGITYDTLIESCSD 600
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 175/372 (47%), Gaps = 40/372 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F A + GL FE M + R P+V YN +I + K + D+A
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMER---NRCLPNVVTYNTVIGAYCKLKRIDEAFKLLR 262
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++P+++T+N++I+G CR + + G+ EM KG P+ V++NTL+ G+
Sbjct: 263 SMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVG 322
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F + + + EM+ G VT L++ +C G + +A E RG+ P Y
Sbjct: 323 NFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYT 382
Query: 335 GLVEKLCGEGNAGIALEVVDELWK-----------------------------------K 359
L+ +G A + DE+ + K
Sbjct: 383 SLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGK 442
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P V++ +T+I G R ++ A + +M+++G+ PD++T++ L++ LC+ R +A
Sbjct: 443 GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L K L PD TY L++GY +E E NL +EM+ +GF+PD TYN ++G
Sbjct: 503 CDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLING 562
Query: 480 LSNARKSVRQTR 491
L+ ++ R
Sbjct: 563 LNKQARTREAKR 574
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 50/238 (21%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ +I GF + +E D+A MV V PD +T++ LI G C ++ + A L
Sbjct: 446 PDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDL 505
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL-- 305
F+EM K P+ ++ +LI G+ E +E +N+ EMI+ G +VT +L++GL
Sbjct: 506 FQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNK 565
Query: 306 ------------------------------------------------CNEGRVLKACEL 317
C +G + +A ++
Sbjct: 566 QARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQV 625
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+R P + Y ++ C +GN A ++ E+ G +P + L++ L
Sbjct: 626 FESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 334 FGLVEKLCGEGN-AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV---------- 382
F LV K C N AL +VD G +P V++ +++ + R RK V
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194
Query: 383 EASGL--------------------------MEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
ASG+ E+M + LP+ VT+N ++ C + R
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A +L +GL+P+ +TY+++++G R R +E ++ EM +GF PD TYN+
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314
Query: 477 MDG 479
++G
Sbjct: 315 VNG 317
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 16/222 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + K +N+ L + M K P YNVLING K +A ++ D
Sbjct: 525 INGYCKEGDLNEALNLHDEMIKK-GFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDE 583
Query: 221 VKPDVVTFNILI---------------SGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
P+ +T++ LI GFC + A +F M ++ PN +N
Sbjct: 584 SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I G + + + EM++ G +VT LV L +EG + ++ D R
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
L LV+ EGN ++ E+ K G LPS A
Sbjct: 704 KLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSGAA 745
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 171/326 (52%), Gaps = 9/326 (2%)
Query: 163 AFVKANRMNDGLLA---FEAMRKLID------GRPSVSIYNVLINGFVKCREFDKALGFY 213
A N + DGL+ F+ M K+ P+V Y LI+G + +F KA +
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ ++ P VV + ILI G C + A +FR MR G PN+ ++NT++ G+
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + EM+ G + VT IL+DGLC ++ A + +ID + GV+P F Y
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C GN AL + E+ K LP V + LI+GL + + EA GL+++M K
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G LP++VT+N L++ C G A + + KG++P+ +T+ L+ GY + + +
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
L EM+ +G +PD+ Y + +DG
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 148/303 (48%), Gaps = 3/303 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ + +R+++ F MR G P++ YN +++G+ K KAL Y
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRN--SGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ D + P+VVTF ILI G C+ + A +M G PN+ +N LI G+
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E +++ E+ + T IL+ GLC R+ +A L+ + ++G LP Y
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C EGN A+EV ++ +KG P++I +TLI+G + K A GL +M+ +
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+LPD V + L++ G T +A RL GL P+ T L+ G ++ R +
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDA 527
Query: 455 ENL 457
L
Sbjct: 528 IKL 530
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 15/325 (4%)
Query: 112 FLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
+ ++R L R SE S+ + N G+ P + ++ ++ + K +
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMR-------NSGML--PNL-YTYNTMMDGYCKIAHVK 280
Query: 172 DGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
L ++ M L DG P+V + +LI+G K E A F M V P++ +N
Sbjct: 281 KALELYQEM--LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI G+C+ AL L E+ + P+V +++ LI+G G + +E + EM + G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
++VT L+DG C EG + KA E+ + +G+ P + L++ C G A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ E+ KG LP V+A T LI+G + EA L ++M + G+ P+ T +CL++ L
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Query: 411 CDVGRTVDADRLRLLASTKGLDPDG 435
C GR DA ++L + G D G
Sbjct: 519 CKDGRISDA--IKLFLAKTGTDTTG 541
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
++AC +V+D GLV+K G +V ++ +G P+V+ TL
Sbjct: 158 MQACNMVLD--------------GLVKK----GRFDTMWKVYGDMVARGASPNVVTYGTL 199
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+G R ++A L ++M+++ I P V + L+ LC R +A+ + G+
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
P+ TY+ ++ GY + K+ L EML +G +P++ T+ +DGL + V
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMV 315
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 171/330 (51%), Gaps = 5/330 (1%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F V+A ++ LAF R++ +D PS + LI F ++ G
Sbjct: 78 NFLVDALARSRNYG---LAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGL 134
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+++ +V NI++ G CRN A+GL REM K +P++VS+NTLI G +K
Sbjct: 135 VLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKK 194
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + EM GC +SVTC L+DGLC +GR+ +A EL+ ++G Y
Sbjct: 195 LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C GN E+ DE+ KG +V+ + L+ GL RL + EA+ ++ M + G
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD VT+ L++ LC GR A L L KG +P +TY++L+SG +E +
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ M+++G D+ TYN+ M GL + K
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGK 404
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 175/334 (52%), Gaps = 9/334 (2%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLID-GRPSVS----IYNVLINGFVKCREFDKALGFY 213
F +N +K N G+ FEAM + + GR SVS YN LING K ++ +A+G
Sbjct: 145 FIMNIVLKGLCRNGGV--FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M P+ VT L+ G C++ + D A+ L M++KG + +VV + TLI GF
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D G + EM+ G + VT LV GLC G+ +A ++ + G+ P Y
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
GL++ LC +G A A+++++ + +KG PS + L+ GL + ++A ++ M++
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRR 451
+G D VT+N L++ LCD G+ +A +L + + L+P+ T+++L+ G +E R
Sbjct: 383 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + +M+ +G +L TYN + G A K
Sbjct: 443 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V I N+++ G + +A+G M R V PD+V++N LI+G C+ KK A+GL
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM GC PN V+ TL+ G + + DE + + M + G + V L+ G CN
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + + EL + +G+ Y LV LC G A V++ + + G P V+
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T LI+GL + + A L+ M+++G P +VT+N LL LC G +DA ++ +
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG--FIPDLATYNSYMDGLSNARKS 486
KG D +TY+ L+ G + + E L N M D P++ T+N + GL +
Sbjct: 383 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442
Query: 487 VRQTR 491
+ +
Sbjct: 443 TKAVK 447
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 8/318 (2%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNIL 231
AF+ +R +I+ + V YN L+ G + D+AL ++ M + ++P+V TFN+L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G C+ + A+ + R+M +KG N+V++N L+ G K E + + ++++LG
Sbjct: 433 IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 492
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+S T IL+DG C + A L + G+ P FDY L+ LC EG+ A
Sbjct: 493 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKS 552
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ E+ P +I+ T+I+G + L KM++ G+ PD++TF+ L+ L
Sbjct: 553 LFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLS 612
Query: 412 DVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+G +A R++AS G PD + Y L+ G + + E NL+++M +G + D
Sbjct: 613 KLGELDEAKSALERMVAS--GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 670
Query: 470 LATYNSYMDGLSNARKSV 487
++ + L ++ + V
Sbjct: 671 RKIVSTILTCLCHSIQEV 688
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 38/356 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K RM++ + EAM+K V +Y LI+GF D+ +D M+
Sbjct: 221 MDGLCKDGRMDEAMELLEAMKK-KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ +VVT++ L+ G CR ++ A + M E G +P+VV++ LI G + + +
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG--------------- 325
++ M+E G E S+VT +L+ GLC EG V+ A +++ +G
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Query: 326 ----------------------VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
+ P F + L+ LC EG A+++ ++ KKG+
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+++ L+ G + K EA L +++L G +P+S T++ L++ C + A L
Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 519
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
T GL+P Y+ L++ +E ++ ++L EM + PD+ ++N+ +DG
Sbjct: 520 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 2/298 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
PS YNVL++G K A M+ K DVVT+N L+ G C K D AL
Sbjct: 351 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 410
Query: 247 LFREM--REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
LF M E PNV +FN LI G E + + V + +M++ G + VT +L+ G
Sbjct: 411 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 470
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G++ +A EL G +P F Y L++ C IA + E+ G P+
Sbjct: 471 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 530
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ TL+ L + +A L ++M PD ++FN +++ G L++
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
GL PD +T+ L++ ++ E ++ + M+ GF PD Y+S + GLS+
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 648
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+F +A+ + + + P T N L+ R++ + LA ++R M P+ S +
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F +K G + +++ G + I++ GLC G V +A L+ + R+
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
V P Y L+ LC A+ ++ E+ G P+ + CTTL++GL + + EA
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+E M K+G D V + L+ C+ G L KG+ + +TY LV G
Sbjct: 234 MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 293
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R + KE ++N M + G PD+ TY +DGL
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 13/319 (4%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D T+ +++ L + E + N + N C +F+ F+ +
Sbjct: 386 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE-NCLEPNVFT-------FNMLIGGLC 437
Query: 166 KANRMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
K R+ A + RK++ ++ YN+L+ G +K + +A+ + +++ P
Sbjct: 438 KEGRLTK---AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 494
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+ T++ILI GFC+ + ++A GLF EMR G NP + +NTL+ E ++ ++
Sbjct: 495 NSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLF 554
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
EM CE ++ ++DG G EL + G+ P + L+ +L
Sbjct: 555 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKL 614
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A ++ + G P + +L++GL E L+ +M +G + D
Sbjct: 615 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 674
Query: 404 NCLLEDLCDVGRTVDADRL 422
+ +L LC + VD L
Sbjct: 675 STILTCLCHSIQEVDVMEL 693
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P + +N +I+G +K +F +MV ++PD +TF+ LI+ + + D A
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
M G P+ + +++L++G + E +N+ ++M G ++ LC
Sbjct: 623 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682
Query: 307 NEGRVLKACELVIDF 321
+ + + EL+ F
Sbjct: 683 HSIQEVDVMELLPTF 697
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 175/336 (52%), Gaps = 1/336 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ +++ L F+ M + P V Y+ +++ VK + D A + M
Sbjct: 187 YNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAM 246
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V P+VVT++ L+ G C+ K D A L + M GC+PN+V++NT+I G +
Sbjct: 247 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRI 306
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE ++ EM++ GC+ + VT +L+D C G+ A LV +G +P F Y L
Sbjct: 307 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSL 366
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C + A +++ + +KG +P+V++ T+I GL + K E L+E+ML
Sbjct: 367 LDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 426
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD VTFN +++ +C R A L L G P+ +TY+ LV G + R + E
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486
Query: 457 LVNEML-DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ EM +G PD+ TYN+ +DGL +++ R +
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 165/325 (50%), Gaps = 3/325 (0%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A + +D +L F M K P YN +ING K D A+ + MV +
Sbjct: 19 GLCDAGQCSDAVLHFREMSKTCP--PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 76
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+V ++N ++ GFC+ + + AL L +M +GC P+VVS+ T+I G + DE +
Sbjct: 77 PNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRV 136
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+MI+ GC+ + +T LVDG C G + A ELV + RG P Y ++ LC
Sbjct: 137 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCS 196
Query: 343 EGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
AL++ E+ + G+ P V +T+++ L + K +A L+E M+ +G P+ V
Sbjct: 197 GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVV 256
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T++ LL LC G+ +A L + G P+ +TY+ ++ G+ + R E +L+ EM
Sbjct: 257 TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 316
Query: 462 LDEGFIPDLATYNSYMDGLSNARKS 486
+D G P++ TY +D K+
Sbjct: 317 VDGGCQPNVVTYTVLLDAFCKCGKA 341
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 155/316 (49%), Gaps = 37/316 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +I G K + + + ++M+ + PD+VTFN +I C+ + D+A L
Sbjct: 393 PNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYEL 452
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLC 306
F ++E GC PN+V++N+L+ G R+FD+ + EM + GC +T ++DGLC
Sbjct: 453 FNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLC 512
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDY--------------------------------- 333
RV +A +L + G+ P D Y
Sbjct: 513 KSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAI 572
Query: 334 -FG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+G L++ C GN ALE++ L KG+ P V+ + I+ L + + +A L+E M
Sbjct: 573 TYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L+ G++PD+VT+N LL+ CD RT DA L + G +PD TY LV +
Sbjct: 633 LRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSY 692
Query: 452 KEGENLVNE-MLDEGF 466
K+ V++ M+D GF
Sbjct: 693 KDLLAEVSKSMVDTGF 708
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 41/368 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ K R+++ A+ + +++DG +P+V Y VL++ F KC + + A+G +
Sbjct: 293 YNTIIDGHCKLGRIDE---AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV P++ T+N L+ FC+ + + A L M +KGC PNVVS+NT+I G
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K EGV + +M+ C VT ++D +C RV A EL G P Y
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469
Query: 335 GLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV LC A ++ E+ +K G P +I T+I+GL + ++ A L +ML
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY-------- 445
+G+ PD VT++ ++ LC +A+ + L G DP +TY L+ G+
Sbjct: 530 DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDK 589
Query: 446 ---------------------------TRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
++ R ++ L+ ML G +PD TYN+ +
Sbjct: 590 ALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 649
Query: 479 GLSNARKS 486
G +A ++
Sbjct: 650 GFCDASRT 657
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 172/367 (46%), Gaps = 37/367 (10%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SCP + V++ VK+ +++D EAM P+V Y+ L++G K + D+
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK-GCSPNVVTYSSLLHGLCKAGKLDE 273
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A RM R P++VT+N +I G C+ + D A L EM + GC PNVV++ L+
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 333
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
F K ++ + + M+E G + T L+D C + V +AC+L+ ++G +P
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393
Query: 329 KDFDYFGLVEKLCG-----EG------------------------------NAGIALEVV 353
Y ++ LC EG IA E+
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 453
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLLEDLCD 412
+ + + G P+++ +L+ GL + R+ +A L+ +M K+G PD +T+N +++ LC
Sbjct: 454 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK 513
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R A +L L + GL PD +TY I++S + E N++ ML GF P T
Sbjct: 514 SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAIT 573
Query: 473 YNSYMDG 479
Y + +DG
Sbjct: 574 YGTLIDG 580
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TF I+ ++ +YR + + N I + C P + ++ V+ K+
Sbjct: 429 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT---------PNL-VTYNSLVHGLCKS 478
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R + M + P + YN +I+G K + D+A + +M+ D + PD VT
Sbjct: 479 RRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 538
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++I+IS C+ + D A + M + G +P +++ TLI GF D+ + + ++
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G VT I +D L GR+ +A EL+ R G++P Y L++ C
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTE 658
Query: 348 IALEVVDELWKKGNLPSVIACTTLI 372
A+++ + + + G P TTL+
Sbjct: 659 DAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M ++G+ + +L LCD G+ DA L +K PD +TY+ +++G ++ +R
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDA-VLHFREMSKTCPPDSVTYNTMINGLSKSDR 59
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L+ EM+D GF P++ +YN+ + G A +
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANR 94
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 170/332 (51%), Gaps = 1/332 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
+ P + ++ +N F K + D L F +RK RP+ +N LING K R D
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR-GLRPTTVSFNTLINGLCKSRNLD 275
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ M +R+ PDV T+++LI G C+ + D+A LF EM+++G PN ++F LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + R+ D +N ++M+ +G + V L++GLC G V KA +LV + G+
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L++ C EG+ A+E+ + ++G + +A T LI G R + +A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M++ G+ PD T+ +++ C G +L G P +TY++L++G +
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + K L+ ML+ G PD TYN ++G
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 184/443 (41%), Gaps = 79/443 (17%)
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS-------- 149
W S+I +FRH ++ + L++ F E S++ F+ + S +F+
Sbjct: 90 WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149
Query: 150 -CPEMERIFHFAVNAFVKANRMNDGLLAFEAMR----------------KLIDGRPSVSI 192
C +F + A+ + ++D + F +R K+I+ V+I
Sbjct: 150 RCSNF--VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI 207
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ FY ++ P V +NILI+ FC+ A +F E+R
Sbjct: 208 WT-----------------FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR 250
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P VSFNTLI G R DEG + M E T +L+ GLC EGR+
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVE---------------------------------- 338
A +L + +RG+ P + L++
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 339 -KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC G+ A ++VDE+ G P I TTLI+G + A + + M +EG++
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
D+V F L+ C GR DA+R G+ PD TY +++ GY ++ K G L
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
+ EM G P + TYN M+GL
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGL 513
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 151/300 (50%), Gaps = 6/300 (2%)
Query: 156 IFHFAV--NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+F ++V + K R++ F+ M++ RP+ + LI+G + R D A+ Y
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQR-GLRPNGITFTALIDGQYRSRRMDSAMNTY 351
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M+ VKPD+V +N L++G C+ + A L EM+ G P+ +++ TLI G+ E
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 411
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + M E G +V L+ G C +GRV A + + G+ P D Y
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ C +GN + +++ E+ G+ P VI L+ GL + + A+ L+E ML
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD +T+N LLE C G+ D +LR + KGL D Y LVS Y + + ++
Sbjct: 532 LGVTPDDITYNILLEGHCKNGKAEDLLKLR---NEKGLIVDYAYYTSLVSEYNKSLKDRQ 588
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
C L+D + N + + G PK Y L+ K C EG+ A + +E+
Sbjct: 191 CGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR 250
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
K+G P+ ++ TLI GL + R E L + M + I PD T++ L+ LC GR
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A++L +GL P+G+T+ L+ G R R N ++ML G PDL YN+ +
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 478 DGL------SNARKSVRQTR 491
+GL + ARK V + +
Sbjct: 371 NGLCKVGDVNKARKLVDEMK 390
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 171/326 (52%), Gaps = 9/326 (2%)
Query: 163 AFVKANRMNDGLLA---FEAMRKLID------GRPSVSIYNVLINGFVKCREFDKALGFY 213
A N + DGL+ F+ M K+ P+V Y LI+G + +F KA +
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ ++ P VV + ILI G C + A +FR MR G PN+ ++NT++ G+
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + EM+ G + VT IL+DGLC ++ A + +ID + GV+P F Y
Sbjct: 277 AHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C GN AL + E+ K LP V + LI+GL + + EA GL+++M K
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G LP++VT+N L++ C G A + + KG++P+ +T+ L+ GY + + +
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
L EM+ +G +PD+ Y + +DG
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 13/305 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LI+G+ K +AL + + + + PDV T++ILI G C + + A GL
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM++KG PN V++NTLI G+ E ++ + + +M E G E + +T L+DG C
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A L + +G+LP Y L++ +GN A + E+ + G P+V
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 368 CTTLIEGLRR------------LRKGVEASGLMEKMLKEGIL-PDSVTFNCLLEDLCDVG 414
+ LI+GL + + G + +G L + P+ V + L++ LC G
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R A + GL PD T +++ G+ R ++ L ++L G IP+ + Y
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYR 630
Query: 475 SYMDG 479
G
Sbjct: 631 VLAKG 635
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 173/375 (46%), Gaps = 26/375 (6%)
Query: 112 FLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
+ ++R L R SE S+ + N G+ P + ++ ++ + K +
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMR-------NSGML--PNL-YTYNTMMDGYCKIAHVK 280
Query: 172 DGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
L + M L DG P+V + +LI+G K E A F M V P++ +N
Sbjct: 281 KALELYXEM--LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI G+C+ AL L E+ + P+V +++ LI+G G + +E + EM + G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
++VT L+DG C EG + KA E+ + +G+ P + L++ C G A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ E+ KG LP V+A T LI+G + EA L ++M + G+ P+ T +CL++ L
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Query: 411 CDVGRTVDADRLRLL--------ASTKGLD-----PDGMTYHILVSGYTRENRRKEGENL 457
C GR DA +L L + T LD P+ + Y L+ G + R +
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578
Query: 458 VNEMLDEGFIPDLAT 472
++M G PD+ T
Sbjct: 579 FSDMRCSGLRPDVFT 593
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
++AC +V+D GLV+K G +V ++ +G P+V+ T
Sbjct: 157 AMQACNMVLD--------------GLVKK----GRFDTMWKVYGDMVARGASPNVVTYGT 198
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G R ++A L ++M+++ I P V + L+ LC R +A+ + G
Sbjct: 199 LIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSG 258
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ P+ TY+ ++ GY + K+ L EML +G +P++ T+ +DGL + V
Sbjct: 259 MLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMV 315
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFY-------------DRMVRDRVKPDVVTFNILISG 234
P+V + LI+G K A+ + + + R P+ V + LI G
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C + + A F +MR G P+V + +I+G F + + + +++++G +
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
S +L G G + A + F GV P D
Sbjct: 626 SSVYRVLAKGYEESGYLKSA----LSFCGEGVQPLD 657
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 188/408 (46%), Gaps = 81/408 (19%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKAL 210
ER ++ VN KA + A+E ++++ DG+ P + Y+ +INGF K E D+A
Sbjct: 9 ERTYNVVVNGLCKARLTSK---AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65
Query: 211 GFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
MV RD + PDVVT+ ++ G CR+ K D A + REM+ KG P+ +F+ LI G
Sbjct: 66 EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL------------ 317
+ RK DE + + E++ C +V+ L+ GLC E R+ +A EL
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185
Query: 318 ---------VID-FSRRGVLPKDFDYFGLVE----------------KLCGEGNAGIALE 351
+ID F + G L K G++E LC G+ AL+
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245
Query: 352 VVDELWKKGNLPSVIACTTLIEGL-----------------------------------R 376
+ + KG +P+V+ TTLI GL
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD-RLRLLASTKGLDPDG 435
RL + EA L ++M + LPD +T+ CL+ C+ R +A L + + G+DPD
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY I+V+GY+R R E + EM+ P+ TY+S +DGL A
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 413
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 161/324 (49%), Gaps = 9/324 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + R+ + F+ M DG +P V Y LI+GF K +KA+ M
Sbjct: 158 ITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 217
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+VVT++ L+ G C+ D AL LFR M KGC PNVV++ TLI G K D
Sbjct: 218 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 277
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM C +V+ L+DG C GR+ +A +L + + + LP Y LV
Sbjct: 278 ARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVR 337
Query: 339 KLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C A +++ + + P V+ + ++ G R ++ VEA+ +++M+ +
Sbjct: 338 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 397
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD-PDGMTYHILVSGYTRENRRKEGEN 456
P++VT++ L++ LC GR A + K +D PD +TY I++ G +R +E
Sbjct: 398 PNAVTYSSLIDGLCKAGRVNHA-----MEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALT 452
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM+++ P + T+NS + L
Sbjct: 453 LLEEMVNKRVEPSVGTFNSVIGAL 476
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 14/307 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y LI+G + D A D M D V++N L+ G+CR + + A L
Sbjct: 257 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQL 316
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-IELGCEFSSVTCEILVDGLC 306
F+EM K C P+ +++ L+RGF + +E + M G + VT I+V G
Sbjct: 317 FKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 376
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R ++A E + + R V P Y L++ LC G A+EV+ + K P V+
Sbjct: 377 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVV 432
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T +IEGL + EA L+E+M+ + + P TFN ++ LC +G +A +L +
Sbjct: 433 TYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 492
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG--------FIPDLATYNSYMD 478
+ GL+P +TY L+ G++R R + L M + +P+ A +++ +
Sbjct: 493 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA-FSALIR 551
Query: 479 GLSNARK 485
GL AR+
Sbjct: 552 GLCKARE 558
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 140/274 (51%), Gaps = 5/274 (1%)
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERK 275
+R+ V P+ T+N++++G C+ + A + +EMR+ K P++V+++T+I GF + +
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 276 FDEGVNMAYEMIEL-GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D + EM+ G VT +VDGLC +G++ +ACE+V + +GV P F +
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LK 393
L+ C AL++ E+ ++ + LI GL R R+ EA L ++M ++
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 394 E--GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
E PD VT+ L++ C G A ++ + + P+ +TY L+ G +
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +L M +G +P++ TY + + GL A K
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 274
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 40/275 (14%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V F A+R+ + E M+ P V Y++++ G+ + + F +A F M+
Sbjct: 336 VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 395
Query: 221 V-------------------------------KPDVVTFNILISGFCRNKKFDLALGLFR 249
V KPDVVT+ I+I G C + + AL L
Sbjct: 396 VAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLE 455
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM K P+V +FN++I DE + M G E VT L++G G
Sbjct: 456 EMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 515
Query: 310 RVLKACELVIDFSRRG--------VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
R+ A EL R+ ++P+ + L+ LC A+ VV+EL +
Sbjct: 516 RMEIAYELFEVMRRKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSREC 574
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
P+ C +++GL R + EA L+ + K G+
Sbjct: 575 EPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ + +R + L E M K ++ PSV +N +I + + D+A
Sbjct: 434 YTIVIEGLCGTDRTEEALTLLEEMVNKRVE--PSVGTFNSVIGALCRLGDMDEAWKLLVA 491
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG----CNPNVV---SFNTLIR 268
M ++P +VT+ L+ GF R + ++A LF MR K N+V +F+ LIR
Sbjct: 492 MAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIR 551
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
G R+ D+ + + E+ CE + C +VDGL GR +A +L+ S+ G+
Sbjct: 552 GLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 167/324 (51%), Gaps = 6/324 (1%)
Query: 159 FAVNAFVKAN-RMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDR 215
A NA + + R ND A E ++++ + + P V YN+LI+G K + DKA
Sbjct: 227 IAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE 286
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV V PD VTFN ++ G C+ KF+ A L M E+ C P+ ++NTLI G ++
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D ++ E + G VT IL DGLC GR+ +A ELV + S +G P Y
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC A E+++ L G +P V+ T +++GL + + +A ++E MLK G
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P +T+ L+E LC GR +A + +K D + Y LV+GY + +R KE +
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+V+ + P + YN+ MDG
Sbjct: 527 KVVDGIRG---TPYIDVYNALMDG 547
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 165/336 (49%), Gaps = 6/336 (1%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
PE+ ++ AF K R+ D L F + P YN +I+G + + D AL
Sbjct: 193 PEVS-VYTILTRAFCKTGRLKDALEIFRNIPS-----PDAIAYNAIIHGHCRKNDCDGAL 246
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
F M +V PDV T+NILI G C+ K D A + EM ++G P+ V+FN+++ G
Sbjct: 247 EFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 306
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
KF+ ++ M E C S T L+ GLC + V +A +LV +F G +P
Sbjct: 307 CKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDV 366
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L + LC G A E+V E+ KG P+++ TLI+GL + K +A L+E
Sbjct: 367 VTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLES 426
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
++ G +PD VT+ +++ LC GR A ++ +G P +TY L+ G R R
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGR 486
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E ++ EM+ + D Y S ++G + ++
Sbjct: 487 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 522
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 160/324 (49%), Gaps = 5/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+H + + + N+++ + K+ +P VS+Y +L F K AL +
Sbjct: 163 YHLVIKSLCQMNQIDKAFTMLDKA-KVRGFKPEVSVYTILTRAFCKTGRLKDALEIF--- 218
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ PD + +N +I G CR D AL +EM E+ P+V ++N LI G K
Sbjct: 219 -RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKT 277
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ M +EM++ G +VT ++DGLC G+ +A L+ + R P Y L
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC + N A ++VDE G +P V+ + L +GL + + EA L+++M +G
Sbjct: 338 ISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGC 397
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT+N L++ LC +T A L + G PD +TY I+V G +E R +
Sbjct: 398 TPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 457
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+V ML G P + TY + M+GL
Sbjct: 458 MVEGMLKRGCTPSVITYTALMEGL 481
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 169/402 (42%), Gaps = 78/402 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TF I+ L + +F HS+L ++ C
Sbjct: 295 DTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC--------------------------- 327
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
RPS YN LI+G K + D+A D V PDVVT
Sbjct: 328 -------------------RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVT 368
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++IL G C+ + D A L +EM KGC PN+V++NTLI G K ++ + ++
Sbjct: 369 YSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV 428
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G VT I+VDGLC EGR+ KA ++V +RG P Y L+E LC G
Sbjct: 429 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 488
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA----------------SGLMEKM 391
A + E+ K +A +L+ G + + EA + LM+
Sbjct: 489 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGY 548
Query: 392 LKEGIL----------------PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
KEG L P+ T+N +++ LC G+ +A + G PD
Sbjct: 549 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 608
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
++Y+I++ G + ++ KE ++++M+ G PD TYN+ M
Sbjct: 609 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 650
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 52/400 (13%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ L + R E H + + + C S VN + K++R
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS----------LVNGYCKSSRT 522
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ + +R G P + +YN L++G+ K D+ ++ M P++ T+NI
Sbjct: 523 KEAQKVVDGIR----GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 578
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
++ G C++ K D A M GC P+VVS+N +I G F K E + +MI+ G
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VT L+ C E R A ++ + + GV P + Y L+ L G A
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRL-RKGV--EASGLMEKMLKEGILPDSVTFNCLL 407
E++ E+ + G + S ACTT + RL ++G +A LM+ M G+ ++VT+N +
Sbjct: 699 ELMHEMLRNGCVVS--ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756
Query: 408 EDLCDVGRTVDADRL---------------------------------RLLASTKGLDPD 434
+ LC GR +A L R + + KGL
Sbjct: 757 DRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 816
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
T+++L+ +T+ R E L+ M+ G P + TYN
Sbjct: 817 SHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 165/328 (50%), Gaps = 6/328 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ ++ K ++++ E+M P V YN++I+G K + +A D
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHS-AGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M++ + PD VT+N L++ FC+ ++FD A+G+ + M + G +P+ V++NTLI G
Sbjct: 633 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692
Query: 275 KFDEGVNMAYEMIELGCEFSSVTC-EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + +EM+ GC S+ T ++D LC EG + +A L+ + GV Y
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++LC EG A ++ E+ L ++ TT+I GL + + AS L +M+
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809
Query: 394 -EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ S TFN L++ R +A L L +G P +TY+++++ + ++
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L +EM G + +Y + GL
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGL 897
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D+ ++RM+ PD T++++I C+ + D A + + + +G P V + L
Sbjct: 142 DRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTIL 201
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
R F + + A E+ ++ ++ G C + A E + + + R V
Sbjct: 202 TRAFCKTGRLKD----ALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKV 257
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F Y L++ LC A E++ E+ +G P + ++++GL + K A
Sbjct: 258 APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 317
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS---TKGLDPDGMTYHILVS 443
L+ M + P T+N L+ LC + + DR + L + G PD +TY IL
Sbjct: 318 LLAVMAERNCRPSCCTYNTLISGLC---KQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G + R E LV EM +G P+L TYN+ +DGL A K+
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ T+ ++ L+ + R + + +++ + N C S +C I ++ K
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS-----ACTTYNTI----IDRLCKE 727
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ LL + M +V+ YN+ I+ K D+A M R D V+
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVT-YNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVS 783
Query: 228 FNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+ +I G C+ ++ D A L REM KG +FN LI F ++ DE + + M
Sbjct: 784 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLM 843
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
++ GC S +T +++ LC +V KA EL + + RG++ Y L+ LCG+G
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 903
Query: 347 GIALEVVDEL 356
AL+V++E+
Sbjct: 904 KEALQVLEEM 913
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+LI+ F K + D+AL MV+ P V+T+N++I+ C+ K D A LF EM
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+G + VS+ LI G G+ + E + + EM CE + E
Sbjct: 880 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWE 926
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKG 381
G P + Y +++ LC A ++D+ +G P V T L RL+
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD-RLRLLA--STKGLDPDGMTY 438
+E + + PD++ +N ++ C R D D L L + + + PD TY
Sbjct: 215 LE-------IFRNIPSPDAIAYNAIIHGHC---RKNDCDGALEFLKEMNERKVAPDVFTY 264
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+IL+ G + ++ + +++EM+D G PD T+NS MDGL A K R
Sbjct: 265 NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++AF K R+++ L M + PSV YN++I K + DKA +D M
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQR-GCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
+ V++ +LI G C + AL + EM C
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 1/293 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P ++NVL+ FV+ E A +D M R V+P VVTFN LISG CR + D GL
Sbjct: 184 PETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGL 242
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++EM + G P+V ++ LI+GF + + V M EM + G ++V L+D C
Sbjct: 243 YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG V +L D RGV+P Y LV LC N A +V+E+ G P +
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + K A + +KM ++ + D VT+ L+ L GR VDA+R+
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMM 422
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+PD TY +++ + R+ K G L+ EM ++G P + TYN M+GL
Sbjct: 423 EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 168/326 (51%), Gaps = 4/326 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R+F+ + FV+ + F+ MR+ + +P+V +N LI+G + R+ D G Y
Sbjct: 187 RLFNVLMRDFVRLGELVSARKVFDEMRRSV--QPTVVTFNTLISGMCRARDLDAVDGLYK 244
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M VKPDV T+ LI GFCR + + A+ +F EMR+ G NPN V F TLI E
Sbjct: 245 EMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEG 304
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI-DFSRRGVLPKDFDY 333
+ G+++ +M G V LV+GLC R LKA E ++ + G+ P Y
Sbjct: 305 NVNAGMDLYQDMRVRGVMPDLVAYNALVNGLC-RARNLKAAESIVEEMKNAGLKPDKVTY 363
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C +G +A+++ ++ +K + T LI GL + + V+A ++ +M++
Sbjct: 364 TTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMME 423
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ PD+ T+ +++ C G +L KG P +TY+++++G + + K
Sbjct: 424 AALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKN 483
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+ L++ ML+ G PD TYN +DG
Sbjct: 484 ADMLLHAMLNIGVSPDDITYNILLDG 509
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 4/292 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F + RM + + F MR P+ ++ LI+ K + + Y M
Sbjct: 262 IKGFCRTGRMENAVKMFNEMRD-TGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD+V +N L++G CR + A + EM+ G P+ V++ TLI G + K D +
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M E VT L+ GL GR + A ++ + + P + Y +++
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +G+ +++ E+ KG P V+ ++ GL +L + A L+ ML G+ PD
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+T+N LL+ C G+ +++ L S+KG+ PD Y L+S ++ K
Sbjct: 501 ITYNILLDGQCKHGKVANSEELE---SSKGMVPDFAVYTSLISELAKKKPAK 549
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 36/284 (12%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A FY +++ + P+ FN+L+ F R + A +F EMR + P VV+FNTLI
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLI 227
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G R D + EM ++G + T L+ G C GR+ A ++ + GV
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + L++ C EGN ++ L
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMD-----------------------------------L 312
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M G++PD V +N L+ LC A+ + GL PD +TY L+ G +
Sbjct: 313 YQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCK 372
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ + ++ +M ++ D TY + + GLS A + V R
Sbjct: 373 DGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAER 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGV-------------LPKDFDYFGLVEKLCGEGNAG 347
L +EG + AC LV+ RRG+ LP + + +L G A
Sbjct: 125 LAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAP 184
Query: 348 -------------------IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
A +V DE+ ++ P+V+ TLI G+ R R GL
Sbjct: 185 ETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLY 243
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++M G+ PD T+ L++ C GR +A ++ G++P+ + + L+ + +E
Sbjct: 244 KEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKE 303
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G +L +M G +PDL YN+ ++GL AR
Sbjct: 304 GNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRAR 339
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 212/469 (45%), Gaps = 33/469 (7%)
Query: 32 PETPPVTL--PSVTLTPTAHH----THLLRFLKTH-----LLTPTNNQITPSSLLHF--- 77
P TPP TL P TL+ +AH+ + L+ F TH ++P+ + ++PS
Sbjct: 11 PWTPPHTLTQPPPTLS-SAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQLPQN 69
Query: 78 -----LKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL 132
L+ L + WAS +F + ++R L F + VL
Sbjct: 70 FTPKQLRDALRRQSDEDSI-LDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVL 128
Query: 133 NFISANPCPCSNDGIFSCPEMER-IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS 191
+ C E+ R F + ++ K ++ + + M + +
Sbjct: 129 QEMKHTGC-----------EIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAF 177
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
YN L+N V + RMV +KPDV TFNILI CR + A+ + EM
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G +P+ +F TL++GF E + + + +M+ GC S+VT +LV G C EGR+
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ + + S G P F + LV LC G+ ALE++D + ++G P + +L
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL +L + EA ++ +M+ P++VT+N L+ LC + +A L + ++KG+
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 417
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD T++ L+ G N + L EM +G PD TYN +D L
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 3/336 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN + + L + M L +G P + YN LI G K E ++A+ ++
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVM--LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQ 376
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+ VT+N LIS C+ + + A L R + KG P+V +FN+LI+G
Sbjct: 377 MILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNN 436
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM GC T +L+D LC+ GR+ +A L+ + G Y
Sbjct: 437 HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNT 496
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C A E+ DE+ +G +V+ TLI+GL + R+ EA+ LM++ML EG
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+N LL C G A + ++ G +PD +TY L+ G ++ R +
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELAS 616
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ + +G + TYN + L +++ R
Sbjct: 617 RLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVR 652
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 162/335 (48%), Gaps = 3/335 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
CP + V+ + K R+ + L + M +G RP +N L+NG +
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSN--EGFRPDRFTFNSLVNGLCRIGHVKH 334
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL D M+++ PD+ T+N LI G C+ + + A+ + +M + +PN V++NTLI
Sbjct: 335 ALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIS 394
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
E + +E +A + G T L+ GLC A EL + +G P
Sbjct: 395 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHP 454
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+F Y L++ LC G AL ++ E+ G +V+ TLI+G + ++ EA +
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF 514
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++M +GI + VT+N L++ LC R +A +L +GL PD TY+ L++ + R
Sbjct: 515 DEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRA 574
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K+ ++V M G PD TY + + GLS A
Sbjct: 575 GDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKA 609
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 2/307 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++I D P+ YN LI+ K + ++A + + PDV TFN LI
Sbjct: 370 AVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 429
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C LA+ LF EM+ KGC+P+ ++N LI + +E +++ EM GC
Sbjct: 430 GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR 489
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+DG C R+ +A E+ + +G+ Y L++ LC A +++
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLM 549
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D++ +G P +L+ R +A+ +++ M G PDSVT+ L+ L
Sbjct: 550 DQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKA 609
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR A RL KG+ TY+ ++ RE R E L EM+++G PD TY
Sbjct: 610 GRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTY 669
Query: 474 NSYMDGL 480
GL
Sbjct: 670 KVVFRGL 676
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +N LI G A+ ++ M PD T+N+LI C + + AL L
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM GC+ NVV++NTLI GF ++ +E + EM G + VT L+DGLC
Sbjct: 479 LKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCK 538
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A +L+ G+ P F Y L+ C G+ A ++V + G P +
Sbjct: 539 NRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVT 598
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI GL + + AS L+ + +G++ T+N +++ L RT +A RL
Sbjct: 599 YGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMM 658
Query: 428 TKGLDPDGMTYHILVSGY-TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG PD +TY ++ G + E + + EM D+GF+PD +++ +GL
Sbjct: 659 EKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGL 712
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 2/314 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + N + FE M K P YN+LI+ ++AL M
Sbjct: 424 FNSLIQGLCLTNNHRLAMELFEEM-KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+VVT+N LI GFC+NK+ + A +F EM +G + NVV++NTLI G R+
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + +M+ G + T L+ C G + KA ++V + G P Y L
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L G +A ++ + KG + + +I+ L R ++ EA L +M+++G
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662
Query: 397 LPDSVTFNCLLEDLCDVGRTV-DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD+VT+ + LC G + +A + + KG PD ++ +L G +
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLI 722
Query: 456 NLVNEMLDEGFIPD 469
LVN ++ + D
Sbjct: 723 KLVNRVMKQANFSD 736
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SL S R E S+L + ++ C S + + ++ ++ F K
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC--SRNVV--------TYNTLIDGFCKN 504
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R+ + F+ M +L +V YN LI+G K R ++A D+M+ + +KPD T
Sbjct: 505 KRIEEAEEIFDEM-ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFT 563
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N L++ FCR A + + M GC P+ V++ TLI G + + + +
Sbjct: 564 YNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQ 623
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNA 346
G + T ++ L E R +A L + +G P Y + LC G G
Sbjct: 624 LKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPI 683
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G A++ + E+ KG LP + L EGL L L+ +++K+ DS
Sbjct: 684 GEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDS 737
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 173/329 (52%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + KA +N+ L + M P V YN ++ + +A+ DRM
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI CR+ A+ L EMR++GC P+VV++N L+ G E +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + +M GC+ + +T I++ +C+ GR + A +L+ D R+G P + L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G G A+++++++ K G P+ ++ L+ G + +K A +E+M+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N +L LC G+ DA + S+KG P +TY+ ++ G + + +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM + PD TY+S + GLS K
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPC-------------PCSNDGIFS- 149
S D T+ I+RSL S + + VL+ + C C + G+
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258
Query: 150 -----------CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLIN 198
C ++ VN K R+++ + M +P+V +N+++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILR 317
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ A M+R P VVTFNILI+ CR A+ + +M + GC P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N +S+N L+ GF E+K D + M+ GC VT ++ LC +G+V A E++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
S +G P Y +++ L G G A++++DE+ K P I ++L+ GL R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K EA + + G+ P++VTFN ++ LC +T A + +G P +Y
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSY 557
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFI 467
IL+ G E KE L+NE+ ++G +
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 4/316 (1%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILI 232
A E + +++ D P V Y +LI + +A+ D M RDR PDVVT+N+L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM-RDRGCTPDVVTYNVLV 281
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ + D A+ +M GC PNV++ N ++R ++ + + +M+ G
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S VT IL++ LC +G + +A +++ + G P Y L+ C E A+E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + +G P ++ T++ L + K +A ++ ++ +G P +T+N +++ L
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+T A +L K L PD +TY LV G +RE + E +E G P+ T
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVT 521
Query: 473 YNSYMDGLSNARKSVR 488
+NS M GL R++ R
Sbjct: 522 FNSIMLGLCKTRQTDR 537
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 143/293 (48%), Gaps = 3/293 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LI GF + + KA + + PDV+T+N++ISG+C+ + + AL +
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +P+VV++NT++R K + + + M++ C +T IL++ C
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ V +A +L+ + RG P Y LV +C EG A++ ++++ G P+VI
Sbjct: 252 DSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ + + ++A L+ ML++G P VTFN L+ LC G A +
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G P+ ++Y+ L+ G+ +E + + M+ G PD+ TYN+ + L
Sbjct: 372 KHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
V+ E ++ F + MV PD++ LI GFCR K A + + G P+
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V+++N +I G+ + + +++ M VT ++ LC+ G++ +A E++
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+R P Y L+E C + G A++++DE+ +G P V+ L+ G+ +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA + M G P+ +T N +L +C GR +DA++L KG P +T++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
IL++ R+ +++ +M G P+ +YN + G +K R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDR 397
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N + + + E M K +P+ YN L++GF K ++ D+A+ + +RM
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKH-GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD+VT+N +++ C++ K + A+ + ++ KGC+P ++++NT+I G K
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + EM + ++T LV GL EG+V +A + +F R GV P + +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSI 525
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + + +G P+ + T LIEGL EA L+ ++ +G+
Sbjct: 526 MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 397 LPDS 400
+ S
Sbjct: 586 MKRS 589
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 32/246 (13%)
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL--- 317
V N +R + +EG M+ G + C L+ G C G+ KA ++
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162
Query: 318 ---------VIDFS--------------------RRGVLPKDFDYFGLVEKLCGEGNAGI 348
VI ++ R V P Y ++ LC G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A+EV+D + ++ P VI T LIE R +A L+++M G PD VT+N L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
+C GR +A + + G P+ +T++I++ R + E L+ +ML +GF P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 469 DLATYN 474
+ T+N
Sbjct: 343 SVVTFN 348
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 186/382 (48%), Gaps = 14/382 (3%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
D F+H +T+ I+ L +F + VL + N +E ++ A+
Sbjct: 34 DGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQN---------VGNHMLEGVYVGAMK 84
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-V 221
+ + ++ + + FE M D P+V YN +++ V FD+A Y RM RDR +
Sbjct: 85 NYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM-RDRGI 142
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PDV +F I + FCR + AL L M +GC NVV++ T++ GF+ E DEG
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKL 340
+ +M+ G T L+ LC +G V K CE ++D +RGVLP F Y ++ L
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDV-KECEKLLDKVIKRGVLPNLFTYNFFIQGL 261
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +G A+ +V L +G P V+ LI GL + K EA + K++ EG+ PDS
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDS 321
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N L+ C G A+R+ + A G PD TY L+ G E L NE
Sbjct: 322 FTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381
Query: 461 MLDEGFIPDLATYNSYMDGLSN 482
L +G P++ YN+ + GLSN
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSN 403
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 192/381 (50%), Gaps = 17/381 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI-FHFAVNAFVK 166
D +F ++S + R +LN +S+ C EM + + V F +
Sbjct: 145 DVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGC-----------EMNVVAYCTVVGGFYE 193
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
N ++G +E K++ S+ S +N L++ K + + D++++ V P+
Sbjct: 194 ENFKDEG---YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ T+N I G C+ + D A+ + + ++G P+VV++N LI G KF E
Sbjct: 251 LFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLG 310
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+++ G E S T L+ G C G V A ++++ G +P +F Y L++ LC EG
Sbjct: 311 KLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEG 370
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + +E KG P+VI TLI+GL +EA+ L +M ++G++P+ TFN
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFN 430
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ LC +G DAD L + +KG PD T++IL+ GY+ + + + +++ M+D
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDN 490
Query: 465 GFIPDLATYNSYMDGLSNARK 485
G PD+ TYNS ++GL K
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSK 511
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 147/307 (47%), Gaps = 2/307 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +LID +P V YN LI G K +F +A + ++V + ++PD T+N LI+
Sbjct: 270 AVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIA 329
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+C+ LA + G P+ ++ +LI G E + + + + E + G +
Sbjct: 330 GYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ + L+ GL N+G +L+A +L + S +G++P+ + LV LC G A +V
Sbjct: 390 NVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ KG P + LI G K A +++ M+ G+ PD T+N LL LC
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKT 509
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ D KG P+ T++IL+ R ++ + L+ EM ++ PD T+
Sbjct: 510 SKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTF 569
Query: 474 NSYMDGL 480
+ +DG
Sbjct: 570 GTLIDGF 576
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 125/250 (50%), Gaps = 10/250 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ + +M + A E + ++D P V YN L+NG K +++ + Y
Sbjct: 464 FNILIHGYSTQLKMEN---ALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYK 520
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV P++ TFNIL+ CR K D ALGL EM+ K NP+ V+F TLI GF
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 275 KFDEGVNMAYEMIEL---GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
D + +M E+ C S+ T I++ + V A +L + R + P +
Sbjct: 581 DLDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +V+ C GN + + + E+ + G +PS+ +I L + EA+G++ +M
Sbjct: 639 TYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 392 LKEGILPDSV 401
+++G++P++V
Sbjct: 699 VQKGLVPEAV 708
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 9/287 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +N+L+NG K A G M+ PD+ TFNILI G+ K + AL +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + G +P+V ++N+L+ G K+++ + M+E GC + T IL++ LC
Sbjct: 484 LDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ KA L+ + + V P + L++ C G+ L+ L++K +++
Sbjct: 544 YHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD----LDGAYTLFRKMEEVYMVS 599
Query: 368 CTT-----LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
C+T +I A L ++M+ + PD T+ +++ C G +
Sbjct: 600 CSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKF 659
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
L G P T +++ E+R E +++ M+ +G +P+
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 2/280 (0%)
Query: 208 KALGFYDRMVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KAL ++ M + D K + T+ +I KF+ + +MR+ N +
Sbjct: 22 KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81
Query: 267 IRGFFGER-KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+G + K E VN+ M CE + + ++ L + G +A ++ + RG
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P + + ++ C AL +++ + +G +V+A T++ G E
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L KML G+ TFN LL LC G + ++L +G+ P+ TY+ + G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ +V ++D+G PD+ TYN + GL K
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSK 301
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 194/414 (46%), Gaps = 31/414 (7%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLN---------------FISA 137
F WAS F H+ T+ + +L + R E +L +
Sbjct: 8 LRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQ 67
Query: 138 NPCPCSNDGIFSCPEMER-----------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
C S D +C +E I++F ++A KA L F +M +
Sbjct: 68 GLCK-SGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM----EC 122
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+V + ++I+G K +A ++ +M + P+ T+N+LI+GFC+ K A
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +EM+E G PNVV+++T+I GF + K D + +M+E GC + VT L+ GLC
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A EL+ + RG+ P F Y L+ LC G +AL+V ++ P V+
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A +TLI GL + + EA L EKM + PD VTF L++ LC R +A ++
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ P+ +TY L+ G + + ++ + + M+ G P++ TYNS + G
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 180/369 (48%), Gaps = 8/369 (2%)
Query: 130 SVLNFISANPCPCSNDG----IFSCPEMER---IFHFAVNAFVKANRMNDGLLAFEAMRK 182
++ NF+ C N F E E+ + ++ KANR+ + F M+K
Sbjct: 95 AIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKK 154
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
P+ YNVLINGF K + +A M + P+VVT++ +I GFCR K D
Sbjct: 155 K-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVD 213
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A LFR+M E GC PN+V++NTL+ G DE + EM E G + + + L+
Sbjct: 214 TAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLM 273
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
GLC G++ A ++ D S P Y L+ LC G A ++ +++ +
Sbjct: 274 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCE 333
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P V+ T L++GL + + EA ++E M P+ +T++ L++ LC G+ DA +
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+G++P+ +TY+ L+ G+ N L+ EM G +PD+ TYN+ +DGL
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCK 453
Query: 483 ARKSVRQTR 491
++ R
Sbjct: 454 TGRAPEANR 462
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E ++ +N F K ++++ L + M++ G P+V Y+ +I+GF + + D A
Sbjct: 161 EWTYNVLINGFCKVHKVHRAYLLLKEMKE--SGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG----------------- 255
+ +MV + P++VT+N L+SG CRN D A L EMRE+G
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278
Query: 256 ------------------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
C P+VV+++TLI G + DE + +M E CE VT
Sbjct: 279 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVT 338
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+DGLC R+ +A +++ R P Y L++ LC G A EV +
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+G P+V+ +LI G + GV+++ LME+M G LPD +T+N L++ LC GR
Sbjct: 399 VRGIEPNVVTYNSLIHGF-CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 457
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A+RL K +PD +TY L+ G+ + R L ++ML + +PD+ T+++
Sbjct: 458 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 517
Query: 477 MDGLSNA 483
++G NA
Sbjct: 518 VEGYCNA 524
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 144/301 (47%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y+ LI G K D+A +++M + +PDVVTF L+ G C+ + A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M ++ C PNV+++++LI G + + + MI G E + VT L+ G
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C V A L+ + + G LP Y L++ LC G A A + ++ K P
Sbjct: 416 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 475
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
VI + LI G +L + A L + MLK+ +LPD VTF+ L+E C+ G DA+RL
Sbjct: 476 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 535
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
PD TY LV G+ + R E ++ M G P++ TY + +D A
Sbjct: 536 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595
Query: 485 K 485
K
Sbjct: 596 K 596
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 148/310 (47%), Gaps = 10/310 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y+ L+ G K + D AL ++ PDVV ++ LI+G C+ + D A
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +MRE C P+VV+F L+ G + E + M + C + +T L+DGLC
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+V A E+ RG+ P Y L+ C AL +++E+ G LP +I
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-----DVGRTVDADR 421
TLI+GL + + EA+ L M + PD +T++CL+ C D+ RT+ D
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L+ + + PD +T+ LV GY + E L+ EM+ PD+ TY S +DG
Sbjct: 503 LK-----QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557
Query: 482 NARKSVRQTR 491
+ V R
Sbjct: 558 KVGRMVEARR 567
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 169/374 (45%), Gaps = 12/374 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D + ++ L + R E + + N C P++ F ++ K
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCE---------PDV-VTFTALMDGLCKG 349
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+R+ + E M + P+V Y+ LI+G K + A + RM+ ++P+VVT
Sbjct: 350 DRLQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 408
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N LI GFC D AL L EM GC P+++++NTLI G + E + +M
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 468
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
C +T L+ G C R+ A L D ++ VLP + LVE C G
Sbjct: 469 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 528
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A +++E+ P V T+L++G ++ + VEA ++++M K G P+ VT+ L+
Sbjct: 529 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM-LDEGF 466
+ C G+ A RL G+ P+ +TY L+ G+ +E ++ + DE
Sbjct: 589 DAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENC 648
Query: 467 IPDLATYNSYMDGL 480
D+ Y MDGL
Sbjct: 649 KADMFAYRVMMDGL 662
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 149/327 (45%), Gaps = 3/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F N ++ LL E M P + YN LI+G K +A + M
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTA-TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PDV+T++ LI GFC+ ++ D+A LF +M ++ P+VV+F+TL+ G+
Sbjct: 468 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM+ C T LVDG C GR+++A ++ ++RG P Y L
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 587
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EG 395
++ C G +A +++E+ G P+VI +LI G EA ++E++ + E
Sbjct: 588 IDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDEN 647
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
D + +++ LC GR A L G P Y L+ G + +
Sbjct: 648 CKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAM 707
Query: 456 NLVNEM-LDEGFIPDLATYNSYMDGLS 481
++ EM L P+ Y + + L+
Sbjct: 708 EVLEEMTLSRKSRPNAEAYEAVIQELA 734
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 3/295 (1%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN L ++ R D+ + P+V T+ ++I G C++ D A L
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EMRE G P+ +N +I R + ++ M CE + +T I++DGLC
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIMIDGLCKA 139
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
R+ +A ++G +P ++ Y L+ C A ++ E+ + G P+V+
Sbjct: 140 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+T+I G R K A L +M++ G +P+ VT+N LL LC G +A L
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+GL PD +Y L++G + + + + + PD+ Y++ + GL A
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V + A ++D E M D P V Y L++GF K +A RM
Sbjct: 514 FSTLVEGYCNAGLVDDAERLLEEMVA-SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +P+VVT+ LI FCR K +A L EM G PNV+++ +LI GF G
Sbjct: 573 AKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 632
Query: 277 DEGVNMAYEMIEL--GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + E +E C+ +++DGLC GR+ A EL+ + G P+ Y
Sbjct: 633 EEARKI-LERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 691
Query: 335 GLVEKLCGEGNAGIALEVVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L+ LC G A+EV++E+ + + P+ A +I+ L R + EA+ L +++L
Sbjct: 692 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 111/272 (40%), Gaps = 68/272 (25%)
Query: 242 DLALGLFR-EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D AL F +++G + NV ++N L R+ DE TC I
Sbjct: 5 DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDE------------------TCHI 46
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L +G G+ P F Y +++ LC G+ A E+++E+ + G
Sbjct: 47 LKNGW-----------------PPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESG 89
Query: 361 NLP--------------------------------SVIACTTLIEGLRRLRKGVEASGLM 388
+P +VI T +I+GL + + EA+
Sbjct: 90 PVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYF 149
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
KM K+G +P+ T+N L+ C V + A L GL P+ +TY ++ G+ R+
Sbjct: 150 AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 209
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L +M++ G +P+L TYN+ + GL
Sbjct: 210 TKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G + T+N L E L R + + G+ P+ TY +++ G +
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ L+ EM + G +PD A YN + L AR + +
Sbjct: 77 KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAK 112
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 171/326 (52%), Gaps = 9/326 (2%)
Query: 163 AFVKANRMNDGLLA---FEAMRKLID------GRPSVSIYNVLINGFVKCREFDKALGFY 213
A N + DGL+ F+ M K+ P+V Y LI+G + +F KA +
Sbjct: 157 AMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ ++ P VV + ILI G C + A +FR MR G PN+ ++NT++ G+
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + EM+ G + VT IL+DGLC ++ A + +ID + GV+P F Y
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C GN AL + E+ K LP V + LI+GL + + EA GL+++M K
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G LP++VT+N L++ C G A + + KG++P+ +T+ L+ GY + + +
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
L EM+ +G +PD+ Y + +DG
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 13/305 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LI+G+ K +AL + + + + PDV T++ILI G C + + A GL
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM++KG PN V++NTLI G+ E ++ + + +M E G E + +T L+DG C
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A L + +G+LP Y L++ +GN A + E+ + G P+V
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510
Query: 368 CTTLIEGLRR------------LRKGVEASGLMEKMLKEGIL-PDSVTFNCLLEDLCDVG 414
+ LI+GL + + G + +G L + P+ V + L++ LC G
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDG 570
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R A + GL PD T +++ G+ R ++ L ++L G IP+ + Y
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYR 630
Query: 475 SYMDG 479
G
Sbjct: 631 VLAKG 635
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 26/375 (6%)
Query: 112 FLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
+ ++R L R SE S+ + N G+ P + ++ ++ + K +
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMR-------NSGML--PNL-YTYNTMMDGYCKIAHVK 280
Query: 172 DGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
L ++ M L DG P+V + +LI+G K E A F M V P++ +N
Sbjct: 281 KALELYQEM--LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI G+C+ AL L E+ + P+V +++ LI+G G + +E + EM + G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
++VT L+DG C EG + KA E+ + +G+ P + L++ C G A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ E+ KG LP V+A T LI+G + EA L ++M + G+ P+ T +CL++ L
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Query: 411 CDVGRTVDADRLRLL--------ASTKGLD-----PDGMTYHILVSGYTRENRRKEGENL 457
C GR DA +L L + T LD P+ + Y L+ G + R +
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578
Query: 458 VNEMLDEGFIPDLAT 472
++M G PD+ T
Sbjct: 579 FSDMRCSGLRPDVFT 593
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
++AC +V+D GLV+K G +V ++ +G P+V+ TL
Sbjct: 158 MQACNMVLD--------------GLVKK----GRFDTMWKVYGDMVARGASPNVVTYGTL 199
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+G R ++A L ++M+++ I P V + L+ LC R +A+ + G+
Sbjct: 200 IDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGM 259
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
P+ TY+ ++ GY + K+ L EML +G +P++ T+ +DGL + V
Sbjct: 260 LPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMV 315
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 21/229 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ + KA +M + + M +I G P V Y LI+G K +A +
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEM--VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKE 498
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLF-------------REMREKGCNPNVVS 262
M + P+V T + LI G C++ + A+ LF E+ C+PN V
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ LI+G + + + +M G TC +++ G + L D
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ G++P Y L + G AL ++L G I C+ L
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIG-----IGCSNL 662
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 169/332 (50%), Gaps = 1/332 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
+ P + ++ +N F K + D L F +RK RP+ +N LING K R D
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR-GLRPTTVSFNTLINGLCKSRNLD 275
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ M +R+ PDV T+++LI G C+ + D+A LF EM+++G PN ++F LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G R+ D +N ++M+ +G + V L++GLC G V KA +LV + G+
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L++ C EG+ A+E+ + ++G + +A T LI G R + +A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M++ G+ PD T+ +++ C G +L G P +TY++L++G +
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + K L+ ML+ G PD TYN ++G
Sbjct: 516 QGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 181/389 (46%), Gaps = 8/389 (2%)
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC---PEME 154
W S+I +FRH ++ + L++ F E S++ F+ + S +F+
Sbjct: 90 WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149
Query: 155 RIFHFAVNAFVKANRMNDGLL--AFEAMRKLIDGRPSVSIYNV--LINGFVKCREFDKAL 210
R +F +A + A + G + A + R + + + + L++ +
Sbjct: 150 RCSNFVFDALMIA-YWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
FY ++ P V +NILI+ FC+ A +F E+R++G P VSFNTLI G
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
R DEG + M E T +L+ GLC EGR+ A +L + +RG+ P
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L++ C A+ ++ G P ++ TL+ GL ++ +A L+++
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M G+ PD +T+ L++ C G A +R + +G+ D + + L+SG+ R+ R
Sbjct: 389 MRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ E + EM++ G PD ATY +DG
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDG 477
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 151/300 (50%), Gaps = 6/300 (2%)
Query: 156 IFHFAV--NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+F ++V + K R++ F+ M++ RP+ + LI+G + R D A+ Y
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQR-GLRPNGITFTALIDGQCRSRRIDSAMNTY 351
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M+ VKPD+V +N L++G C+ + A L EMR G P+ +++ TLI G+ E
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKE 411
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + M E G +V L+ G C +GRV A + + G+ P D Y
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ C +GN + +++ E+ G+ P VI L+ GL + + A+ L+E ML
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD +T+N LLE C G+ D +LR + KGL D Y LVS Y + + ++
Sbjct: 532 LGVTPDDITYNILLEGHCKNGKAEDLLKLR---NEKGLIVDYAYYTSLVSEYNKSLKDRQ 588
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
C L+D + N + + G PK Y L+ K C EG+ A + +E+
Sbjct: 191 CGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR 250
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
K+G P+ ++ TLI GL + R E L + M + I PD T++ L+ LC GR
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A++L +GL P+G+T+ L+ G R R N ++ML G PDL YN+ +
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 478 DGL------SNARKSVRQTR 491
+GL + ARK V + R
Sbjct: 371 NGLCKVGDVNKARKLVDEMR 390
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 153/299 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+LI GF D AL F+DRM + P+VVT+N LI G+C+ +K D L
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M KG PN++S+N +I G E + E + EM + G VT L+ G C
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG +A + + R G+ P Y L+ +C GN A E +D++ +G P+
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++G + EA ++++M+ G P VT+N L+ C G+ VDA +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL PD ++Y ++SG+ R E + +M+ +G PD TY+S + G R++
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 164/323 (50%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F A ++ L F+ M K P+V YN LI+G+ K R+ D M
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKK-GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++P+++++N++I+G CR + + EM ++G + + V++NTLI+G+ E F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M EM+ G S +T L+ +C G + +A E + RG+ P + Y L
Sbjct: 327 HQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTL 386
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ +G A V+ E+ G PSV+ LI G K V+A ++E M ++G+
Sbjct: 387 VDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL 446
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD V+++ +L C +A R++ KG+ PD +TY L+ G+ + R KE +
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L +EML G PD TY + ++
Sbjct: 507 LFDEMLRVGLPPDEFTYTALINA 529
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 164/323 (50%), Gaps = 18/323 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+++ KA MN + MR + G P+ Y L++GF + ++A M+ +
Sbjct: 352 IHSMCKAGNMNRATEFLDQMR--VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDN 409
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P VVT+N LI+G C K A+ + +M+EKG P+VVS++T++ GF DE
Sbjct: 410 GFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEA 469
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + +M+ G + ++T L+ G C + R +AC+L + R G+ P +F Y L+
Sbjct: 470 LRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINA 529
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ A+++ +E+ +KG LP V+ + LI GL + + EA L+ K+ E +P
Sbjct: 530 YCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPS 589
Query: 400 SVTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
VT++ L+E+ C G +AD++ K PDG Y++++ G
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHG 649
Query: 445 YTRENRRKEGENLVNEMLDEGFI 467
+ R ++ +L EM+ GF+
Sbjct: 650 HCRGGDIRKAYSLYKEMVKSGFL 672
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 159/326 (48%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + RM + M K V+ YN LI G+ K F +AL + M
Sbjct: 278 YNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT-YNTLIKGYCKEGNFHQALVMHAEM 336
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R + P V+T+ LI C+ + A +MR +G PN ++ TL+ GF +
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EMI+ G S VT L++G C G+++ A ++ D +G+ P Y +
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + AL V ++ KG P I ++LI+G R+ EA L ++ML+ G+
Sbjct: 457 LSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGL 516
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L+ C G A +L KG+ PD +TY +L++G ++ R +E +
Sbjct: 517 PPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKR 576
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ ++ E +P TY++ ++ SN
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 2/318 (0%)
Query: 172 DGLLAFEAMRKLID-GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D L F ++++ D + S++++++ + + DKAL P V+++N
Sbjct: 115 DASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNA 174
Query: 231 LISGFCRNKK-FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
++ R+K+ A +F+EM + +PNV ++N LIRGF D + M +
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKK 234
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC + VT L+DG C ++ EL+ + +G+ P Y ++ LC EG
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEI 294
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
V+ E+ K+G + TLI+G + +A + +ML+ G+ P +T+ L+
Sbjct: 295 SFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHS 354
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+C G A +GL P+ TY LV G++++ E ++ EM+D GF P
Sbjct: 355 MCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414
Query: 470 LATYNSYMDGLSNARKSV 487
+ TYN+ ++G A K V
Sbjct: 415 VVTYNALINGHCIAGKMV 432
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 3/247 (1%)
Query: 247 LFREMREKG--CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+FR ++E CN F+ +++ + D+ +++ + G ++ ++D
Sbjct: 119 VFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDA 178
Query: 305 LCNEGRVLKACELVI-DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
R + E V + + V P F Y L+ C GN +AL D + KKG LP
Sbjct: 179 TIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLP 238
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+V+ TLI+G +LRK + L+ M +G+ P+ +++N ++ LC GR + +
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +G D +TY+ L+ GY +E + + EML G P + TY S + + A
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358
Query: 484 RKSVRQT 490
R T
Sbjct: 359 GNMNRAT 365
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 104/276 (37%), Gaps = 52/276 (18%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A RK++ +P Y+ LI GF + R +A +D M+R + PD T+ LI+
Sbjct: 469 ALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALIN 528
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK------------FDEGV- 280
+C A+ L EM EKG P+VV+++ LI G + + ++E V
Sbjct: 529 AYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVP 588
Query: 281 -NMAYEMIELGC---EFSSVTC---------------------------------EILVD 303
++ Y + C EF SV +++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIH 648
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C G + KA L + + G L LV+ L EG V+ + + L
Sbjct: 649 GHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELS 708
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L+E R ++ +M K+G LP+
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 208/441 (47%), Gaps = 50/441 (11%)
Query: 90 HYDFH--IFAWASTIDSFRHDH---------------------TTFLFIVRSLASSYRFS 126
H+ F + +++ ID DH T+ +V +L R
Sbjct: 94 HFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSK 153
Query: 127 ELHSVLNFISANPCP-------CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
E S+L ++AN CP G+ E+E F F+ + ++ ++ F +
Sbjct: 154 EAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNS 213
Query: 180 M-------RKLIDG------------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ ++++D RP+V Y+ LI+G K + D+AL +MV
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + VT++ ++ G + + + A+ + R+MR+ GC P+ V++NTLI GFF ++ E V
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+E G S VT L GLC GR +A E++ + RG P Y +V+ L
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 393
Query: 341 CGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C G AL +++ + + P VIA + LI+GL + K EA +E+M++ G +PD
Sbjct: 394 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD 453
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VTF+ L+ LCD GR L + +G PD +TY LV R +R E +L
Sbjct: 454 VVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQ 513
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
+M +G PD +T + + GL
Sbjct: 514 QMRSDGLSPDRSTRRTMIHGL 534
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM-VRD 219
++ K R+ + FE R P+V YN +I+G KC + AL YD M +
Sbjct: 37 IDGLGKQRRVKEAYDLFEEARAK-GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHF 95
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+P VVT++ LI G CR+ + D L EM +GC PN V++NTL+ G+ + E
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID--FSRRGVLPKDFDYFGLV 337
++ +M GC +T +++ GLC EG + A +V + G+ P + ++
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ LC E A V ++G P+V+ +TLI+GL ++ K EA L+ KM++ G
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 275
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
++VT++ +++ L VGR DA + G PD +TY+ L+ G+ + R +E L
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 335
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNA 483
+ EML+ GF P + TY + GL +
Sbjct: 336 LREMLEAGFHPSVVTYTTLCHGLCRS 361
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 158/288 (54%), Gaps = 3/288 (1%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+I+G K R+ DKA+ + +MV + PDVVT+ LI G + ++ A LF E R KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-IELGCEFSSVTCEILVDGLCNEGRVLKA 314
C+P VV++NT+I G + + + + +M I G + VT L+DGLC + V K
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
C+L+ + + RG P Y LV L G+G + A +++++ G P +I +I+G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 375 LRRLRKGVEASGLMEK--MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + + A ++++ M++ G+ PD +TFN +L+ LC R +DA + A +G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ +TY L+ G ++ + E L+ +M++ G + TY++ +DGL
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 288
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 166/331 (50%), Gaps = 6/331 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ VNA + R + E M +G P + + ++I G K E + A D
Sbjct: 139 YNTLVNALLGQGRSKEAFSLLEQMAA--NGCPPELITFGLIIKGLCKEGEIEAAFRVVDE 196
Query: 216 M--VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M + + PDV+TFN ++ G C+ ++ A +F+ E+GC PNVV+++TLI G
Sbjct: 197 MFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 256
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K DE + + +M+ELGC ++VT +VDGL GR+ A ++ G LP Y
Sbjct: 257 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 316
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ A+ ++ E+ + G PSV+ TTL GL R + EA +++ M
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G P+++T++ +++ LC GR +A +A + + P + Y L+ G + +
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E + M+ G IPD+ T++ ++GL +A
Sbjct: 437 EAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 133/258 (51%), Gaps = 3/258 (1%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+I G C+++K D A+ LF++M +K P+VV++ LI G +R+ E ++ E G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIA 349
C + VT ++DGLC GR+ A L D + G P Y L++ LC +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++++E+ +G P+ + TL+ L + EA L+E+M G P+ +TF +++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 410 LCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G A R+ + GL PD +T++ ++ G +E R + N+ L+ G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 468 PDLATYNSYMDGLSNARK 485
P++ TY++ +DGLS K
Sbjct: 241 PNVVTYSTLIDGLSKMAK 258
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+ +K RM D ++ MR P YN LI+GF K + +A+G M
Sbjct: 281 YSTVVDGLLKVGRMEDAVVVLRQMRD-AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VVT+ L G CR+ +FD A+ + M +GC PN +++++++ G +
Sbjct: 340 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 399
Query: 277 DEGVNMAYEMIELGCEFSSVTC-EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + +M V L+DGLC G++ +A E + R G +P +
Sbjct: 400 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSI 459
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G LE+ + ++G +P ++ TL++ L R + EA L ++M +G
Sbjct: 460 LINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG 519
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ PD T ++ L +V R DA R++
Sbjct: 520 LSPDRSTRRTMIHGLLEVNRDEDAKRIQ 547
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC A+ + ++ K P V+ LI+GL + R+ EA L E+ +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
P VT+N +++ LC GR +A L +A G P +TY L+ G R++ +G
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+ EM G P+ TYN+ ++ L +S
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS 152
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 173/329 (52%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + KA +N+ L + M P V YN ++ + +A+ DRM
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI CR+ A+ L EMR++GC P+VV++N L+ G E +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + +M GC+ + +T I++ +C+ GR + A +L+ D R+G P + L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G G A+++++++ + G P+ ++ L+ G + +K A +E+M+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N +L LC G+ DA + S+KG P +TY+ ++ G + + +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM + PD TY+S + GLS K
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPC-------------PCSNDGIF-- 148
S D T+ I+RSL S + + VL+ + C C + G+
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 149 ----------SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLIN 198
C ++ VN K R+++ + M +P+V +N+++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILR 317
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ A M+R P VVTFNILI+ CR A+ + +M + GC P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N +S+N L+ GF E+K D + M+ GC VT ++ LC +G+V A E++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
S +G P Y +++ L G G A++++DE+ K P I ++L+ GL R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K EA + + GI P++VTFN ++ LC +T A + +G P+ +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFI 467
IL+ G E KE L+NE+ ++G +
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 4/316 (1%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILI 232
A E + +++ D P V Y +LI + A+ D M RDR PDVVT+N+L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLV 281
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ + D A+ +M GC PNV++ N ++R ++ + + +M+ G
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S VT IL++ LC +G + +A +++ + G P Y L+ C E A+E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + +G P ++ T++ L + K +A ++ ++ +G P +T+N +++ L
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+T A +L K L PD +TY LV G +RE + E +E G P+ T
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 473 YNSYMDGLSNARKSVR 488
+NS M GL +R++ R
Sbjct: 522 FNSIMLGLCKSRQTDR 537
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 8/360 (2%)
Query: 122 SYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR 181
+ +F L S + + N S + F+ ++E H V+ + +G E M
Sbjct: 72 AQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL--RQMVRTGELEEGFKFLENM- 128
Query: 182 KLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+ G P + LI GF + + KA + + PDV+T+N++ISG+C+ +
Sbjct: 129 -VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+ AL + M +P+VV++NT++R K + + + M++ C +T I
Sbjct: 188 INNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++ C + V A +L+ + RG P Y LV +C EG A++ ++++ G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+VI ++ + + ++A L+ ML++G P VTFN L+ LC G A
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G P+ ++Y+ L+ G+ +E + + M+ G PD+ TYN+ + L
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
V+ E ++ F + MV PD++ LI GFCR K A + + G P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V+++N +I G+ + + +++ M VT ++ LC+ G++ +A E++
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+R P Y L+E C + G A++++DE+ +G P V+ L+ G+ +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA + M G P+ +T N +L +C GR +DA++L KG P +T++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
IL++ R+ +++ +M G P+ +YN + G +K R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 115/214 (53%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YN L++GF K ++ D+A+ + +RMV PD+VT+N +++ C++ K + A+
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ ++ KGC+P ++++NT+I G K + + + EM + ++T LV GL
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+V +A + +F R G+ P + ++ LC A++ + + +G P+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ T LIEGL EA L+ ++ +G++ S
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
>gi|297790223|ref|XP_002863014.1| hypothetical protein ARALYDRAFT_497209 [Arabidopsis lyrata subsp.
lyrata]
gi|297308813|gb|EFH39273.1| hypothetical protein ARALYDRAFT_497209 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 188/431 (43%), Gaps = 153/431 (35%)
Query: 56 FLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFI 115
FL+ +L P + +TP +LL FL+SKL H P + HY +F WA+T+ +
Sbjct: 8 FLENNL--PHHQTLTPQTLLGFLRSKLRHQPLYAHYVLAVFNWAATL------------M 53
Query: 116 VRSLASSYRFSELHS-----VLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
+ L+S R HS + FI +PCPCS+ GIFSCP++E IF A++A+
Sbjct: 54 ITILSSGCR---DHSPPGTGLTIFIFFSPCPCSS-GIFSCPQLEPIFRSAIDAYY----- 104
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
DKAL FY RM ++R K
Sbjct: 105 -----------------------------------MDKALRFYQRMGKERAK-------- 121
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
P+V +FNTLI G+ KFD +++ EM E G
Sbjct: 122 ---------------------------PDVCTFNTLINGYCRSFKFDLALDLFREMKEQG 154
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
CE + EG+V A LVI V ++ + A +
Sbjct: 155 CEPN-----------LGEGQVDDARGLVI-----------------VYRVSLKNKADREM 186
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E+V+ELWKKG P IACTTL++GLR+ + +ASG MEKM+ GIL D
Sbjct: 187 EMVEELWKKGQTPCFIACTTLVQGLRKSERVEKASGFMEKMMNAGILRD----------- 235
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
+TK L P LVSG+T+E RRKE E +VNEM D+ +PD+
Sbjct: 236 ----------------TTKDLKPMRQHTMFLVSGFTKEGRRKEREVIVNEMWDKDVLPDI 279
Query: 471 ATYNSYMDGLS 481
TYN MD LS
Sbjct: 280 FTYNRLMDSLS 290
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 216/455 (47%), Gaps = 39/455 (8%)
Query: 36 PVTLPSVTLTPTA----HHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHY 91
P +LP++ LT +A H T L + + L+ I+ +SL H L S L P F
Sbjct: 87 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSL---PISTASL-HPLLSALPSAPAFA-- 140
Query: 92 DFHIFAWASTIDSFRHD----HTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI 147
+FA D FR TTF ++R L S+ + + L + P P +
Sbjct: 141 ---LFA-----DMFRLRLPLCTTTFNIMLRHLCSAGKPAR---ALELLRQMPRPNA---- 185
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
++ + F R+ L MR+ P+ Y +I+G+ K D
Sbjct: 186 -------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 238
Query: 208 KALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFRE-MREKGCNPNVVSFNT 265
+A+ +D M+ + VKP+ V +N LI G+C K D AL L+R+ M E+G V ++N
Sbjct: 239 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNL 297
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ F + + E + EM G T IL++G C EG V KA E+ + SRRG
Sbjct: 298 LVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V Y L+ L +G ++ DE ++G P ++ LI A
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+M +M K+ I PD VT+N L+ LC +GR +A +L + +G+ PD +TY+ L+SGY
Sbjct: 418 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 477
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + K+ + NEM+++GF P L TYN+ + GL
Sbjct: 478 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 512
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M R R+ TFNI++ C K AL L R+M PN V++NT+I
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193
Query: 269 GFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-V 326
GF + +++ EM E G + T ++ G C GRV +A ++ + +G V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P+ Y L+ C +G AL D + ++G +V L+ L +G EA
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E+M +G+ D T+N L+ C G A + S +G+ +TY L+ +
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ + +E + L +E + G PDL YN+ ++ S +
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 410
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
EA+R+ I RP + +YN LIN D+A M + R+ PD VT+N L+ G C
Sbjct: 387 EAVRRGI--RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 444
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L EM ++G P++V++NTLI G+ + + + + EM+ G + +T
Sbjct: 445 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 504
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
L+ GLC G+ A +V + G+ P D Y L+E L E I
Sbjct: 505 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 555
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 226/474 (47%), Gaps = 35/474 (7%)
Query: 35 PPVTLPS----VTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTH 90
PP +L S ++ PT HT H L SLLHF+ S+ +
Sbjct: 89 PPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSV 148
Query: 91 YDFHIFAWASTIDSFRHD-----HTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSND 145
+ + + SF D +T F ++ ++ +R ++ H++ I N C C +
Sbjct: 149 FASILETKGTLSSSFVFDALMSVYTEFGYVSDAI-QCFRLTKKHNLK--IPFNGCKCLLE 205
Query: 146 GI--FSCPEMERIFHFAV----------------NAFVKANRMNDGLLAFEAMRKLIDGR 187
+ S P + F+ + N K ++ D L F+ +RK +
Sbjct: 206 RMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRK-TGLQ 264
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRD--RVKPDVVTFNILISGFCRNKKFDLAL 245
P+ +N LING+ K ++ GF +MV + RV PDV T++ LI G C+ + + A
Sbjct: 265 PTAVSFNTLINGYCKSGNLEE--GFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDAN 322
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF+EM ++G PN V+F TLI G + D + + +M G + V L+DGL
Sbjct: 323 HLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G +A + V + ++RG++P F Y L++ C EG+ +ALE+ E+ K+G
Sbjct: 383 CKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDN 442
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+A T +I GL R K V+A + +ML+ G+ PD T+ +++ C G +L
Sbjct: 443 VAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKE 502
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ G P +TY++L++G ++ + K + L+N ML+ G +PD TYN + G
Sbjct: 503 MQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 208/471 (44%), Gaps = 45/471 (9%)
Query: 54 LRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFT--HYDFHIFAWASTIDSFRHDHTT 111
++ ++T L + I PS H S ++ +P F F + S+ +F H +
Sbjct: 53 IKNIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQS 112
Query: 112 FLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER-------IFHFAVNAF 164
+ +V L + + S+L+F+ + S +F+ + +F ++ +
Sbjct: 113 YCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVY 172
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ ++D + F +K + + + L+ +K AL FY ++ P+
Sbjct: 173 TEFGYVSDAIQCFRLTKKH-NLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPN 231
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
V TFN+L++ C+ K A +F E+R+ G P VSFNTLI G+ +EG +
Sbjct: 232 VYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKM 291
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M E T L+DGLC E ++ A L + RG++P D + L+ C G
Sbjct: 292 VMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNG 351
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGL------RRLRKGVE--------------- 383
+ALE+ +++ KG ++ TLI+GL R RK V
Sbjct: 352 RVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYT 411
Query: 384 --------------ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
A + ++M+KEGI D+V F ++ LC G+ VDA+R
Sbjct: 412 TLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRA 471
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL PD TY +++ G+ ++ K G L+ EM +G IP + TYN M+GL
Sbjct: 472 GLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 8/295 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ K ++ D F+ M R L+ P+ + LING K D AL Y +M
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLV---PNDVTFTTLINGQCKNGRVDLALEIYQQMFT 365
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K D+V +N LI G C+ F A EM ++G P+ ++ TL+ G E +
Sbjct: 366 KGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLEL 425
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M EM++ G + +V ++ GLC +G+++ A + + R G+ P D Y +++
Sbjct: 426 ALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMD 485
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G+ + +++ E+ G++P VI L+ GL + + A L+ ML G++P
Sbjct: 486 GFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVP 545
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
D +T+N LL+ C G+ D ++ + GL D +Y L+ ++ ++ ++
Sbjct: 546 DDITYNILLQGHCKHGKLGDFQNVK---TEMGLVSDYASYRSLLHELSKASKDRQ 597
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 216/456 (47%), Gaps = 41/456 (8%)
Query: 36 PVTLPSVTLTPTA----HHTHLLRFLKTHLLT-PTNNQITPSSLLHFLKSKLHHHPQFTH 90
P +LP++ LT +A H T L + + L+ P + ++ LH L S L P F
Sbjct: 421 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIS-----TASLHPLLSALPSAPAFA- 474
Query: 91 YDFHIFAWASTIDSFRHD----HTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDG 146
+FA D FR TTF ++R L S+ + + L + P P +
Sbjct: 475 ----LFA-----DMFRLRLPLCTTTFNIMLRHLCSAGKPAR---ALELLRQMPRPNA--- 519
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
++ + F R+ L MR+ P+ Y +I+G+ K
Sbjct: 520 --------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 571
Query: 207 DKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFRE-MREKGCNPNVVSFN 264
D+A+ +D M+ + VKP+ V +N LI G+C K D AL L+R+ M E+G V ++N
Sbjct: 572 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 630
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L+ F + + E + EM G T IL++G C EG V KA E+ + SRR
Sbjct: 631 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 690
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
GV Y L+ L +G ++ DE ++G P ++ LI A
Sbjct: 691 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 750
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+M +M K+ I PD VT+N L+ LC +GR +A +L + +G+ PD +TY+ L+SG
Sbjct: 751 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 810
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+ + K+ + NEM+++GF P L TYN+ + GL
Sbjct: 811 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 846
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M R R+ TFNI++ C K AL L R+M PN V++NT+I
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527
Query: 269 GFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-V 326
GF + +++ EM E G + T ++ G C GRV +A ++ + +G V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P+ Y L+ C +G AL D + ++G +V L+ L +G EA
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E+M +G+ PD T+N L+ C G A + S +G+ +TY L+ +
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ + +E + L +E + G PDL YN+ ++ S +
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 744
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
EA+R+ I RP + +YN LIN D+A M + R+ PD VT+N L+ G C
Sbjct: 721 EAVRRGI--RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 778
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L EM E+G P++V++NTLI G+ + + + + EM+ G + +T
Sbjct: 779 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 838
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
L+ GLC G+ A +V + G+ P D Y L+E L E I
Sbjct: 839 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 889
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 216/456 (47%), Gaps = 41/456 (8%)
Query: 36 PVTLPSVTLTPTA----HHTHLLRFLKTHLLT-PTNNQITPSSLLHFLKSKLHHHPQFTH 90
P +LP++ LT +A H T L + + L+ P + ++ LH L S L P F
Sbjct: 416 PSSLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIS-----TASLHPLLSALPSAPAFA- 469
Query: 91 YDFHIFAWASTIDSFRHD----HTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDG 146
+FA D FR TTF ++R L S+ + + L + P P +
Sbjct: 470 ----LFA-----DMFRLRLPLCTTTFNIMLRHLCSAGKPAR---ALELLRQMPRPNA--- 514
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
++ + F R+ L MR+ P+ Y +I+G+ K
Sbjct: 515 --------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 566
Query: 207 DKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFRE-MREKGCNPNVVSFN 264
D+A+ +D M+ + VKP+ V +N LI G+C K D AL L+R+ M E+G V ++N
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYN 625
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L+ F + + E + EM G T IL++G C EG V KA E+ + SRR
Sbjct: 626 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 685
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
GV Y L+ L +G ++ DE ++G P ++ LI A
Sbjct: 686 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 745
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+M +M K+ I PD VT+N L+ LC +GR +A +L + +G+ PD +TY+ L+SG
Sbjct: 746 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 805
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+ + K+ + NEM+++GF P L TYN+ + GL
Sbjct: 806 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 841
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M R R+ TFNI++ C K AL L R+M PN V++NT+I
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522
Query: 269 GFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-V 326
GF + +++ EM E G + T ++ G C GRV +A ++ + +G V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P+ Y L+ C +G AL D + ++G +V L+ L +G EA
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E+M +G+ PD T+N L+ C G A + S +G+ +TY L+ +
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ + +E + L +E + G PDL YN+ ++ S +
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 739
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
EA+R+ I RP + +YN LIN D+A M + R+ PD VT+N L+ G C
Sbjct: 716 EAVRRGI--RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 773
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L EM E+G P++V++NTLI G+ + + + + EM+ G + +T
Sbjct: 774 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 833
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
L+ GLC G+ A +V + G+ P D Y L+E L E I
Sbjct: 834 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 884
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 220/466 (47%), Gaps = 41/466 (8%)
Query: 27 PLPSRP--ETPPVTLPSVTLTPTA----HHTHLLRFLKTHLLTPTNNQITPSSLLHFLKS 80
PL P + P +LP++ LT +A H T L + + L+ I+ +SL H L S
Sbjct: 36 PLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLSL---PISTASL-HPLLS 91
Query: 81 KLHHHPQFTHYDFHIFAWASTIDSFRHD----HTTFLFIVRSLASSYRFSELHSVLNFIS 136
L P F +FA D FR TTF ++R L S+ + + L +
Sbjct: 92 ALPSAPAFA-----LFA-----DMFRLRLPLCTTTFNIMLRHLCSAGKPAR---ALELLR 138
Query: 137 ANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVL 196
P P + ++ + F R+ L MR+ P+ Y +
Sbjct: 139 QMPRPNA-----------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 187
Query: 197 INGFVKCREFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFRE-MREK 254
I+G+ K D+A+ +D M+ + VKP+ V +N LI G+C K D AL L+R+ M E+
Sbjct: 188 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVER 246
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G V ++N L+ F + + E + EM G T IL++G C EG V KA
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
E+ + SRRGV Y L+ L +G ++ DE ++G P ++ LI
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
A +M +M K+ I PD VT+N L+ LC +GR +A +L + +G+ PD
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+TY+ L+SGY+ + K+ + NEM+++GF P L TYN+ + GL
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M R R+ TFNI++ C K AL L R+M PN V++NT+I
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153
Query: 269 GFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-V 326
GF + +++ EM E G + T ++ G C GRV +A ++ + +G V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P+ Y L+ C +G AL D + ++G +V L+ L +G EA
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E+M +G+ PD T+N L+ C G A + S +G+ +TY L+ +
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ + +E + L +E + G PDL YN+ ++ S +
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 370
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
EA+R+ I RP + +YN LIN D+A M + R+ PD VT+N L+ G C
Sbjct: 347 EAVRRGI--RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L EM E+G P++V++NTLI G+ + + + + EM+ G + +T
Sbjct: 405 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 464
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
L+ GLC G+ A +V + G+ P D Y L+E L E I
Sbjct: 465 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 515
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 169/335 (50%), Gaps = 1/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ KANR+ + F M+K P+ YNVLINGF K + +A M
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+VVT++ +I GFCR K D A LFR+M E GC PN+V++NTL+ G
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + EM E G + + + L+ GLC G++ A ++ D S P Y L
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ +++ + P V+ T L++GL + + EA ++E M
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ +T++ L++ LC G+ DA + +G++P+ +TY+ L+ G+ N
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ EM G +PD+ TYN+ +DGL ++ R
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E ++ +N F K ++++ L + M++ G P+V Y+ +I+GF + + D A
Sbjct: 42 EWTYNVLINGFCKVHKVHRAYLLLKEMKE--SGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG----------------- 255
+ +MV + P++VT+N L+SG CRN D A L EMRE+G
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 256 ------------------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
C P+VV+++TLI G + DE + +M E CE VT
Sbjct: 160 TGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVT 219
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+DGLC R+ +A +++ R P Y L++ LC G A EV +
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+G P+V+ +LI G + GV+++ LME+M G LPD +T+N L++ LC GR
Sbjct: 280 VRGIEPNVVTYNSLIHGF-CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 338
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A+RL K +PD +TY L+ G+ + R L ++ML + +PD+ T+++
Sbjct: 339 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 398
Query: 477 MDGLSNA 483
++G NA
Sbjct: 399 VEGYCNA 405
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 157/296 (53%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
++ +V + ++I+G K +A ++ +M + P+ T+N+LI+GFC+ K
Sbjct: 1 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A L +EM+E G PNVV+++T+I GF + K D + +M+E GC + VT L+
Sbjct: 61 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC G + +A EL+ + RG+ P F Y L+ LC G +AL+V ++ P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+A +TLI GL + + EA L EKM + PD VTF L++ LC R +A ++
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ P+ +TY L+ G + + ++ + + M+ G P++ TYNS + G
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 144/301 (47%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y+ LI G K D+A +++M + +PDVVTF L+ G C+ + A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M ++ C PNV+++++LI G + + + MI G E + VT L+ G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C V A L+ + + G LP Y L++ LC G A A + ++ K P
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
VI + LI G +L + A L + MLK+ +LPD VTF+ L+E C+ G DA+RL
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
PD TY LV G+ + R E ++ M G P++ TY + +D A
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476
Query: 485 K 485
K
Sbjct: 477 K 477
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 148/310 (47%), Gaps = 10/310 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y+ L+ G K + D AL ++ PDVV ++ LI+G C+ + D A
Sbjct: 144 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACK 203
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +MRE C P+VV+F L+ G + E + M + C + +T L+DGLC
Sbjct: 204 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 263
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+V A E+ RG+ P Y L+ C AL +++E+ G LP +I
Sbjct: 264 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 323
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-----DVGRTVDADR 421
TLI+GL + + EA+ L M + PD +T++CL+ C D+ RT+ D
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L+ + + PD +T+ LV GY + E L+ EM+ PD+ TY S +DG
Sbjct: 384 LK-----QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 438
Query: 482 NARKSVRQTR 491
+ V R
Sbjct: 439 KVGRMVEARR 448
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 169/374 (45%), Gaps = 12/374 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D + ++ L + R E + + N C P++ F ++ K
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCE---------PDV-VTFTALMDGLCKG 230
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+R+ + E M + P+V Y+ LI+G K + A + RM+ ++P+VVT
Sbjct: 231 DRLQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVT 289
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N LI GFC D AL L EM GC P+++++NTLI G + E + +M
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
C +T L+ G C R+ A L D ++ VLP + LVE C G
Sbjct: 350 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A +++E+ P V T+L++G ++ + VEA ++++M K G P+ VT+ L+
Sbjct: 410 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM-LDEGF 466
+ C G+ A +L G+ P+ +TY L+ G+ +E ++ + DE
Sbjct: 470 DAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENC 529
Query: 467 IPDLATYNSYMDGL 480
D+ Y MDGL
Sbjct: 530 KADMFAYRVMMDGL 543
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F N ++ LL E M P + YN LI+G K +A + M
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMTA-TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 348
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PDV+T++ LI GFC+ ++ D+A LF +M ++ P+VV+F+TL+ G+
Sbjct: 349 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 408
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM+ C T LVDG C GR+++A ++ ++RG P Y L
Sbjct: 409 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EG 395
++ C G +A ++++E+ G P+VI +LI G EA ++E++ + E
Sbjct: 469 IDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDEN 528
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
D + +++ LC GR A L G P Y L+ G + +
Sbjct: 529 CKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAM 588
Query: 456 NLVNEM-LDEGFIPDLATYNSYMDGLS 481
++ EM L P+ Y + + L+
Sbjct: 589 EVLEEMTLSRKSRPNAEAYEAVIQELA 615
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V + A ++D E M D P V Y L++GF K +A RM
Sbjct: 395 FSTLVEGYCNAGLVDDAERLLEEMVA-SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +P+VVT+ LI FCR K +A L EM G PNV+++ +LI GF G
Sbjct: 454 AKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 513
Query: 277 DEGVNMAYEMIEL--GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E M E +E C+ +++DGLC GR+ A EL+ + G P+ Y
Sbjct: 514 EEARKM-LERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 572
Query: 335 GLVEKLCGEGNAGIALEVVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L+ LC G A+EV++E+ + + P+ A +I+ L R + EA+ L +++L
Sbjct: 573 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 35/264 (13%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ +V+T+ I+I G C+ + A F +M++KG PN ++N
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYN----------------- 46
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+L++G C +V +A L+ + G+ P Y ++ C
Sbjct: 47 ------------------VLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFC 88
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
+ A ++ ++ + G +P+++ TL+ GL R EA L+++M + G+ PD
Sbjct: 89 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 148
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+++ L+ LC G+ A ++ S PD + Y L++G + R E L +M
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
+ PD+ T+ + MDGL +
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDR 232
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%)
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
CE + +T I++DGLC R+ +A ++G +P ++ Y L+ C A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ E+ + G P+V+ +T+I G R K A L +M++ G +P+ VT+N LL L
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G +A L +GL PD +Y L++G + + + + + PD+
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 471 ATYNSYMDGL 480
Y++ + GL
Sbjct: 183 VAYSTLIAGL 192
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 175/339 (51%), Gaps = 5/339 (1%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFD 207
C +F+ V+ KAN++++ E M R ++ P V YN LI+G K +
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIV---PDVVTYNSLIDGLCKSYRME 225
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A + MV+ +V+P++VT+N LI G+C+ LA L M + G +P+VV+FN+LI
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF + K D+ + + M + C + VT +L+ GLC+ GR +ACEL+ + RG+L
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ C A ++ + + ++G +P I+ TL L + + EA L
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ M G +P+ TFN L+E LC R +A L + G DP TY +LV+G +
Sbjct: 406 LDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCK 465
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
R + + ++ M+ EG P +++ + + L+ K
Sbjct: 466 AGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQ 504
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 148/328 (45%), Gaps = 37/328 (11%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI GF K + ++A M PDVVT + ++ C A+ FRE
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E C P+ V FN L+ G + E M EM E G VT L+DGLC R+
Sbjct: 168 E--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L+ +R V P Y L+ C G G+A ++++ + + G P V+ +LI
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285
Query: 373 EG-------------LRRLRKGV----------------------EASGLMEKMLKEGIL 397
G L ++KG+ EA L+ +M GIL
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD +T+N L+ C + A +++ L +G+ PDG++Y L + R E L
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ M D G IP+L T+NS M+GL +R+
Sbjct: 406 LDNMFDAGAIPNLFTFNSLMEGLCCSRR 433
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 10/289 (3%)
Query: 204 REFDKALGFYDRMVRDRVKPDV---VTFNILISGFCRNKKFDLALGLFR-EMREKGCNPN 259
++ D +L F+ + R + T N L+ + ++ A +FR E+ + C+ N
Sbjct: 45 KDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTN 104
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
+++NTLI GF + + EM E G VT +V LCN G + +A +
Sbjct: 105 HITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRA----M 160
Query: 320 DFSRRGV--LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ R V P + LV LC A ++++E+ ++G +P V+ +LI+GL +
Sbjct: 161 QYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCK 220
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA L+E M+K + P+ VT+N L+ C G T A +L G PD +T
Sbjct: 221 SYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ L+SG+ ++++ + +++ M P+L TYN + GL +A ++
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRA 329
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 133/313 (42%), Gaps = 31/313 (9%)
Query: 86 PQFTHYDFHIFAWAST-------------IDSFRH-DHTTFLFIVRSLASSYRFSELHSV 131
P Y+ I+ + T I S H D TF ++ + + V
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300
Query: 132 LNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---P 188
L+ + C P + ++ ++ A R N+ M DGR P
Sbjct: 301 LHLMKKGLCA---------PNLV-TYNVLISGLCDAGRANEACELLSEM----DGRGILP 346
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ YN LI F + + ++A + MV V PD +++ L ++++FD A L
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M + G PN+ +FN+L+ G R+ DE ++ M +GC+ ++ T E+LV GLC
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GRV A E+++ G+ P +V L EG +AL D++ + +
Sbjct: 467 GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSY 526
Query: 369 TTLIEGLRRLRKG 381
L+E ++ LR+G
Sbjct: 527 QKLLEFVKVLREG 539
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 167/336 (49%), Gaps = 18/336 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N+ KA +N + F+ MR I G RP+ Y LI+GF + ++A + M
Sbjct: 361 INSMCKARNLNRAMEFFDQMR--IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 418
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P VVT+N I G C ++ + ALG+ +EM EKG P+VVS++T+I GF + + D
Sbjct: 419 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRA 478
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M EM+E G +VT L+ GLC R+ +AC+L + G+ P +F Y L+
Sbjct: 479 FQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 538
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ AL + DE+ KG LP + + LI GL + + EA L+ K++ E +P
Sbjct: 539 YCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598
Query: 400 SVTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
VT++ L+E+ C G +ADR+ + P Y++++ G
Sbjct: 599 DVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 658
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + NL EM+ GF+P T + + L
Sbjct: 659 HCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 694
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 207/470 (44%), Gaps = 28/470 (5%)
Query: 29 PSRPETPPVTLPSVTLTPTAHH------THLLRFLKTHLLTPTNNQITPSSLLHFLKSKL 82
P+ PE +L+ T+H LL+F H L +++ TP S +FL
Sbjct: 10 PNLPELVSSKARFSSLSSTSHALLVDKAITLLKF-HPHHLDSLSSRFTPQSASYFLLKS- 67
Query: 83 HHHPQFTH-YDFHIFAWASTIDSF-RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPC 140
QF WA F H L I+ L L +++P
Sbjct: 68 ----QFDQTLTLKFLTWARNHPFFDSHCKCLSLHILTRFKLYKTAQTLAQELALSASDP- 122
Query: 141 PCSNDGIFSCPE--------MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
S IF C + +F V ++ N ++ + + K P V
Sbjct: 123 --SGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTIN-LAKSSGFMPGVLS 179
Query: 193 YNVLINGFVKCREFDK--ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
YN +++ V+ R K A Y M+R RV P+V T+NILI GFC + LG F E
Sbjct: 180 YNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGE 239
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M GC PNVV++NTLI + + DE + M G + + ++ ++++GLC EG
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A E++ + +G P + Y L+ C EGN AL + E+ + G PSV+ T
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI + + R A ++M G+ P+ T+ L++ G +A R+ + G
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P +TY+ + G+ R +E +V EM+++G PD+ +Y++ + G
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F + GL F M + +G P+V YN LI+ + K D+A G
Sbjct: 217 YNILIRGFCSVGELQKGLGCFGEMER--NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 274
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++P+++++N++I+G CR A + EM KG P+ V++NTL+ G+ E
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F + + + EM+ G S VT L++ +C + +A E RG+ P + Y
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ +G A +++E+ + G PSV+ I G L + EA G++++M+++G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V+++ ++ C G A +++ KG+ PD +TY L+ G R E
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L EMLD G PD TY + ++
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINA 538
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + M + E M P YN L+NG+ K F +AL + M
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEM-GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR+ V P VVT+ LI+ C+ + + A+ F +MR +G PN ++ TLI GF +
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM E G S VT + G C R+ +A +V + +G+ P Y +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +G A ++ E+ +KG P + ++LI+GL +R+ EA L ++ML G+
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L+ C G A L KG PD +TY +L++G ++ R +E +
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ +++ E +P TY++ ++ SN
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIENCSN 611
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 13/350 (3%)
Query: 152 EMER--------IFHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFV 201
EMER ++ ++A+ K R+++ GLL + + + +P++ YNV+ING
Sbjct: 239 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGM---QPNLISYNVIINGLC 295
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ +A + M PD VT+N L++G+C+ F AL + EM G +P+VV
Sbjct: 296 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++ LI R + + +M G + T L+DG +G + +A ++ +
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+ G P Y + C AL VV E+ +KG P V++ +T+I G R +
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A + ++M+++G+ PD+VT++ L++ LC++ R +A L GL PD TY L
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++ Y E + +L +EM+ +GF+PD TY+ ++GL+ ++ R
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC-NEGRV-LKA 314
N + F+ +++ + D+ VN G ++ ++D + + G V L A
Sbjct: 139 NSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA 198
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
E+ + R V P + Y L+ C G L E+ + G LP+V+ TLI+
Sbjct: 199 EEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
++ + EA GL++ M +G+ P+ +++N ++ LC G +A + KG PD
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+TY+ L++GY +E + + EM+ G P + TY + ++ + AR
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 368
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 57/302 (18%)
Query: 162 NAFVKAN----RMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRM 216
NAF+ + RM + L + M + G P V Y+ +I+GF + E D+A M
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVE--KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEM 485
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V PD VT++ LI G C ++ A L +EM + G P+ ++ TLI + E
Sbjct: 486 VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDL 545
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGL------------------------------- 305
++ +++ EMI G +VT +L++GL
Sbjct: 546 NKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605
Query: 306 -------------------CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
C +G + +A + R P + Y ++ C GN
Sbjct: 606 IENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNL 665
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A + E+ G +P + TLI+ L + E S ++ L+ L ++ L
Sbjct: 666 PKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVL 725
Query: 407 LE 408
+E
Sbjct: 726 VE 727
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 17/229 (7%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LIN + + +KAL +D M+ PD VT+++LI+G + + A L
Sbjct: 527 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586
Query: 248 FREMREKGCNPNVVSFNTLI---------------RGFFGERKFDEGVNMAYEMIELGCE 292
++ + P+ V+++TLI +GF + E + M+E +
Sbjct: 587 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 646
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+++ G C G + KA L + G +P L++ L EG EV
Sbjct: 647 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 706
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILPDS 400
+ + + L L+E + +EA ++ M K+G+LP+S
Sbjct: 707 IGDTLRSCRLNEAELAKVLVE-INHKEGNMEAVLNVLTDMAKDGLLPNS 754
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 104/274 (37%), Gaps = 30/274 (10%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI-FSCPEMERIFHFAVNAFVK 166
D T+ +++ L R +E C S + + P E + +NA+
Sbjct: 493 DAVTYSSLIQGLCEMRRLTE-----------ACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 167 ANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+N L L E + K P Y+VLING K +A +++ + P
Sbjct: 542 EGDLNKALHLHDEMIHKGF--LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599
Query: 226 VTFNILI---------------SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
VT++ LI GFC A +F M E+ P +N +I G
Sbjct: 600 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 659
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ N+ EMI G +VT L+ L EG + E++ D R L +
Sbjct: 660 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEA 719
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LVE EGN L V+ ++ K G LP+
Sbjct: 720 ELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 18/417 (4%)
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
+PS LL L+ + + +F WAS ++ + F ++R LA + F +
Sbjct: 58 SPSQLLDLLRRQPDSSSALS-----LFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRP 188
++L + ++ P E F + + ++ ++ + F M + +P
Sbjct: 113 TLLRQMHSSKIPVD----------ESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKP 162
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
YNV ++ VK + + +MV D V PDV TFNILI C+ + A+ +
Sbjct: 163 DTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILML 222
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+M G P+ +F TL++GF E + + + M+E GCE +SV+ +LV+GLC E
Sbjct: 223 EDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKE 282
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ +A + + G P + LV LC G+ LE++D + +KG V
Sbjct: 283 GRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTY 340
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+LI GL +L + EA ++ M+ P++VT+N L+ LC A L + ++
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTS 400
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ PD T++ L+ G + R+ L EM ++G PD TY+ ++ L + R+
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 139/306 (45%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P+ YN LI K + A + V PDV TFN LI G C ++A
Sbjct: 367 DCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIA 426
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ LF EM+EKGC+P+ +++ LI ER+ E + + EM GC + V L+DG
Sbjct: 427 MELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG 486
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC RV A ++ GV Y L+ LC A +++D++ +G P
Sbjct: 487 LCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TT+++ + A+ +++ M G PD VT+ L+ LC GR A +L
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ Y+ ++ + R KE L EM+++G PD+ TY GL N
Sbjct: 607 SVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGG 666
Query: 485 KSVRQT 490
+++
Sbjct: 667 GPIQEA 672
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 160/343 (46%), Gaps = 4/343 (1%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
CP+ + F+ VN + + GL + M L G V YN LI+G K E D+
Sbjct: 299 CPD-QVTFNALVNGLCRTGHIKQGLEMMDFM--LEKGFELDVYTYNSLISGLCKLGEIDE 355
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ MV +P+ VT+N LI C+ + A L R + KG P+V +FN+LI+
Sbjct: 356 AVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQ 415
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + + + EM E GC+ T IL++ LC+E R+ +A L+ + G
Sbjct: 416 GLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCAR 475
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L++ LC G A ++ D++ G S + TLI GL + ++ EA+ LM
Sbjct: 476 NVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLM 535
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++M+ EG+ PD T+ +L+ C G A + + G +PD +TY L+ G +
Sbjct: 536 DQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKA 595
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R L+ + +G + YN + L +++ R
Sbjct: 596 GRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMR 638
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +N LI G + A+ ++ M PD T++ILI C ++ AL L
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALML 464
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM GC NVV +NTLI G + + ++ +M LG SSVT L++GLC
Sbjct: 465 LKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK 524
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A +L+ G+ P F Y +++ C +G+ A ++V + G P ++
Sbjct: 525 SKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVT 584
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI GL + + AS L+ + +G++ +N +++ LC RT +A RL
Sbjct: 585 YGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMM 644
Query: 428 TKGLDPDGMTYHILVSGYTRENRR-KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG PD +TY I+ G +E + EML++G +P+ ++ +GL
Sbjct: 645 EKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGL 698
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 155/329 (47%), Gaps = 3/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A KA+++ +L E M RP + L+ GF++ + + AL + M
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPN-YGLRPDEKTFTTLMQGFIEEADVEGALRIKELM 260
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V + V+ N+L++G C+ + + AL E E+G P+ V+FN L+ G
Sbjct: 261 VESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHI 318
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+G+ M M+E G E T L+ GLC G + +A E++ R P Y L
Sbjct: 319 KQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL 378
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC E + A E+ L KG LP V +LI+GL A L E+M ++G
Sbjct: 379 IGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC 438
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+E LC R +A L G + + Y+ L+ G + NR + E+
Sbjct: 439 DPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAED 498
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M G TYN+ ++GL +++
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSKR 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C E + + + R+ + L+ + M +L +V +YN LI+G K A
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEM-ELSGCARNVVVYNTLIDGLCKNNRVGDA 496
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+D+M V VT+N LI+G C++K+ + A L +M +G P+ ++ T+++
Sbjct: 497 EDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKY 556
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + ++ M GCE VT L+ GLC GRV A +L+ +G++
Sbjct: 557 FCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLT 616
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV-EASGLM 388
Y +++ LC A+ + E+ +KG+ P VI + GL + EA
Sbjct: 617 PQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFT 676
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVG 414
+ML++GILP+ +F L E LC +
Sbjct: 677 VEMLEKGILPEFPSFGFLAEGLCSLS 702
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 12/296 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SL S R E +L + + C +++ ++ K
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELS----------GCARNVVVYNTLIDGLCKN 490
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
NR+ D F+ M L R SV+ YN LING K + ++A D+M+ + +KPD T
Sbjct: 491 NRVGDAEDIFDQMEMLGVSRSSVT-YNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFT 549
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ ++ FC+ A + + M GC P++V++ TLI G + D + +
Sbjct: 550 YTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQ 609
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNA 346
G + ++ LC R +A L + +G P Y + LC G G
Sbjct: 610 MKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPI 669
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A++ E+ +KG LP + L EGL L L+ ++++G S T
Sbjct: 670 QEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET 725
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 174/329 (52%), Gaps = 3/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K N + FE M+ ++ PS+ YN L++G + + ++A+ + M
Sbjct: 13 YNSLIDGLCKNNEPDRAQELFEHMKS-VECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 71
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ DR DV++FNIL++G CR K + AL FR+M ++ C+PNV++++ LI G +
Sbjct: 72 L-DRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRV 129
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ V + M GC +T ILVDGLC E +V A E++ + G +P Y L
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 189
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC AL ++ ++ +G P+V+ TLI+GL ++ + +A ++ M+ +G
Sbjct: 190 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 249
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD + +N L+ LC + ++ L A + G+ PD +TY ++ G R NR E
Sbjct: 250 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 309
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ + G PD+ Y++ +DGL A K
Sbjct: 310 LLLYVKSRGCPPDVILYSTLIDGLCKAGK 338
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 167/329 (50%), Gaps = 9/329 (2%)
Query: 163 AFVKANRMNDGLL-------AFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYD 214
+ V N + DGL A ++++D R V +N+L+ G + + + AL F+
Sbjct: 44 SMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFR 103
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M DR P+V+T+++LI G C+ + A+ L M+ +GC+P+V+++ L+ G E
Sbjct: 104 KM-DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 162
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + EM++ GC + VT L+ GLC RV A L+ D + RG P Y
Sbjct: 163 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 222
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A ++ ++ KG P ++ LI GL + + E+ L+ + +
Sbjct: 223 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 282
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD VT++ ++ LC R +A RL L ++G PD + Y L+ G + + E
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+L M +G D+ TY++ +DGL A
Sbjct: 343 FDLYEVMTGDGCDADVVTYSTLIDGLCKA 371
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 156/298 (52%), Gaps = 2/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN LI+G K E D+A ++ M P +VT+N L+ G R K + A+ L
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+EM ++ + +V+SFN L+ G K + + +M + C + +T +L+DGLC
Sbjct: 68 FQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCK 125
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A EL+ RG P Y LV+ LC E A EV+ E+ G +P+++
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L+ GL R R+ +A LM M G P+ VT+ L++ LC VGR DA +
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG PD M Y++L++G + ++ E L+ + G PD+ TY+S + GL + +
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 303
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 160/327 (48%), Gaps = 4/327 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID-GRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ V +A ++ A E RK+ D P+V Y+VLI+G K +A+ +
Sbjct: 82 FNILVTGLCRAGKIET---ALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLES 138
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M PDV+T+ IL+ G C+ K A + REM + GC PN+V++N+L+ G R+
Sbjct: 139 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 198
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + + +M GC + VT L+DGLC GRV AC ++ D +G P Y
Sbjct: 199 VSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNM 258
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC ++ ++ G P V+ +++I GL R + EA L+ + G
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD + ++ L++ LC G+ +A L + + G D D +TY L+ G + R E
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAH 378
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ M+ G P TYNS + GL +
Sbjct: 379 LLLARMVRMGTPPSTMTYNSLIKGLCD 405
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 179/377 (47%), Gaps = 16/377 (4%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ L + R S+ +L + A C S D I + V+ K +++
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESMKARGC--SPDVI--------TYTILVDGLCKESKV 164
Query: 171 NDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
A+E +R+++D P++ YN L++G + R AL M P+VVT+
Sbjct: 165 A---AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 221
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
LI G C+ + A + +M +KG P+++ +N LI G + DE + + +
Sbjct: 222 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 281
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT ++ GLC R+ +AC L++ RG P Y L++ LC G
Sbjct: 282 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 341
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A ++ + + G V+ +TLI+GL + + EA L+ +M++ G P ++T+N L++
Sbjct: 342 AFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 401
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE-NLVNEMLDEGFI 467
LCD+ +A L P +TY+IL+ G R R + EM+D G I
Sbjct: 402 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVI 461
Query: 468 PDLATYNSYMDGLSNAR 484
PD TY+ ++GL ++
Sbjct: 462 PDHITYSILLEGLKKSK 478
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 212/445 (47%), Gaps = 27/445 (6%)
Query: 46 PTAHHTHLLRFLKTH---LLTPTNN------QITPSSLLHFLKSKLHHHPQFTHYDFHIF 96
PT++ T L F T+ L T TN+ TP+ LLH L+ + + + H+F
Sbjct: 24 PTSNST--LSFATTNHEPLTTTTNSATRLSPNFTPTQLLHSLRRE-----EDSSAVIHLF 76
Query: 97 AWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI 156
WAS +F+ + F ++ L + F + +L + + ND + +
Sbjct: 77 YWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLL-------V 129
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + ++ N+ L +AM + YN L+N V + + M
Sbjct: 130 F---IESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNM 186
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V ++PDV TFNILI CR + A+ L EM + G P+ +F T+++GF E
Sbjct: 187 VSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNL 246
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS-RRGVLPKDFDYFG 335
D + + +M+E GC ++VT +LV+G C EGR+ +A + + S R G P + +
Sbjct: 247 DGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNM 306
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV L G+ ALEV+D + ++G P + +LI GL +L + EA ++ +M++
Sbjct: 307 LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P++VT+N ++ LC + +A +L L+ + KG+ PD TY+ L+ G
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L EM +G PD TYN +D L
Sbjct: 427 ELYKEMKTKGCHPDEFTYNMLIDSL 451
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 163/329 (49%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F K R+ + L E M P +N+L+NG K AL D M+R+
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PD+ T+N LISG C+ + D A+ + +M E+ C+PN V++NT+I E + +E +
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
A + G T L+ GLC A EL + +G P +F Y L++ LC
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G AL ++ E+ G +VI TLI+G + ++ EA + ++M +G+ +SVT
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N L++ LC R +A +L +GL PD TY+ L++ + + K+ ++V M
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+G PD+ TY + + GL A + T+
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATK 602
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 157/336 (46%), Gaps = 3/336 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN K + L + M R+ D P + YN LI+G K E D+A+ ++
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFD--PDIYTYNSLISGLCKLGEVDEAVKVLNQ 361
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+ VT+N +IS C+ + + A L + KG P+V ++N+LI+G R
Sbjct: 362 MIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN 421
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM GC T +L+D LC G++ +A L+ + G Y
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNT 481
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C A E+ D++ +G + + TLI+GL + + EAS LM++M+ EG
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG 541
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+N LL C G A + ++ G +PD +TY L++G + R +
Sbjct: 542 LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAAT 601
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ + +G YN + L ++S R
Sbjct: 602 KLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVR 637
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN LI G R A+ Y M PD T+N+LI C K AL L
Sbjct: 404 PDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNL 463
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM GC NV+++NTLI GF ++ E + +M G +SVT L+DGLC
Sbjct: 464 LKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK 523
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A +L+ G+ P F Y L+ C G+ A ++V + G P ++
Sbjct: 524 SERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVT 583
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI GL + + A+ L+ + +GI +N +++ L R+ +A RL
Sbjct: 584 YGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643
Query: 428 TKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K PD +TY I+ G + E + V EML+ G++P+ +++ +GL
Sbjct: 644 EKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGL 697
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ K+ R+ + + M +++G RP YN L+ F K + KA
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQM--IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQT 571
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D +PD+VT+ LI+G C+ + + A L R ++ KG N ++N +I+ F ++
Sbjct: 572 MASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKR 631
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR-VLKACELVIDFSRRGVLPKDFDYF 334
E V + EMIE +VT +I+ GLC G + +A + V++ RG +P+ ++
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFY 691
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
L E L G ++++D + +K T+I G ++ K +A
Sbjct: 692 MLAEGLFSLAMVGTLIKLIDMVMEKAKFSD--NEVTMIRGFLKISKYQDA 739
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 149/299 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+LI GF D AL +D+M P+VVT+N LI G+C+ +K D L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M KG PN++S+N +I G E + E + EM G VT L+ G C
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG +A + + R G+ P Y L+ +C GN A+E +D++ +G P+
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++G + EA ++ +M G P VT+N L+ C G+ DA +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL PD ++Y ++SG+ R E + EM+++G PD TY+S + G R++
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 18/323 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+++ KA MN + + MR + G P+ Y L++GF + ++A M +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMR--VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P VVT+N LI+G C K + A+ + +M+EKG +P+VVS++T++ GF DE
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM+E G + ++T L+ G C + R +AC+L + R G+ P +F Y L+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ AL++ +E+ +KG LP V+ + LI GL + + EA L+ K+ E +P
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 400 SVTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
VT++ L+E+ C G +AD++ K PDG Y+I++ G
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 445 YTRENRRKEGENLVNEMLDEGFI 467
+ R ++ L EM+ GF+
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFL 672
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F A ++ L F+ M + P+V YN LI+G+ K R+ D M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++P+++++N++I+G CR + + EM +G + + V++NTLI+G+ E F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M EM+ G S +T L+ +C G + +A E + RG+ P + Y L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ +G A V+ E+ G PSV+ LI G K +A ++E M ++G+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD V+++ +L C +A R++ KG+ PD +TY L+ G+ + R KE +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L EML G PD TY + ++
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINA 529
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 160/326 (49%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + RM + M + V+ YN LI G+ K F +AL + M
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT-YNTLIKGYCKEGNFHQALVMHAEM 336
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R + P V+T+ LI C+ + A+ +MR +G PN ++ TL+ GF +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM + G S VT L++G C G++ A ++ D +G+ P Y +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + AL V E+ +KG P I ++LI+G R+ EA L E+ML+ G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L+ C G A +L KG+ PD +TY +L++G +++R +E +
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ ++ E +P TY++ ++ SN
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEM 286
F++++ + R D AL + + G P V+S+N ++ +R N+ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E V P F Y L+ C GN
Sbjct: 197 LE-----------------------------------SQVSPNVFTYNILIRGFCFAGNI 221
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+AL + D++ KG LP+V+ TLI+G +LRK + L+ M +G+ P+ +++N +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC GR + + + +G D +TY+ L+ GY +E + + EML G
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 467 IPDLATYNSYMDGLSNA 483
P + TY S + + A
Sbjct: 342 TPSVITYTSLIHSMCKA 358
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 108/279 (38%), Gaps = 52/279 (18%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A R++++ +P Y+ LI GF + R +A Y+ M+R + PD T+ LI+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK------------FDEGV- 280
+C + AL L EM EKG P+VV+++ LI G + + ++E V
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 281 -NMAYEMIELGC---EFSSVTC---------------------------------EILVD 303
++ Y + C EF SV I++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C G + KA L + + G L LV+ L EG V+ + + L
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
L+E R ++ +M K+G LP+ ++
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 395 GILPDSVTFNCLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G +P +++N +L+ R + A+ + + P+ TY+IL+ G+
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L ++M +G +P++ TYN+ +DG RK
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 204/414 (49%), Gaps = 20/414 (4%)
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTF------LFIVRSLASSYRFSELHSVLNFISA 137
+ QF H F +A+ + S F F++ SL + + + V +FI
Sbjct: 193 YSTQFKHLGF---GFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICL 249
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLI 197
GI P++ +F +NAF K +R +D + F M KL P+V YN +I
Sbjct: 250 G-------GII--PDV-HLFSTMINAFCKGHREDDAIGLFSKMEKL-GVAPNVVTYNNII 298
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+G K D+A F ++MV+++V P ++T+++ I+G + +K D A + +EM E G
Sbjct: 299 HGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFV 358
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN V +NTLI G+ E + + +M+ G +SVT L+ G C ++ +A +
Sbjct: 359 PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENV 418
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + RG+ + ++ LC + AL + E+ + P+ TTL+ GL +
Sbjct: 419 LEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCK 478
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
K EA L ++L +G +P+ VT N L+ LC G + +L +GL D +T
Sbjct: 479 AGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRIT 538
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
Y+ L+SG +E + KEG L EM+ +G PD+ T+N + GL NA K +R
Sbjct: 539 YNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 164/331 (49%), Gaps = 5/331 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ KA M + L M R L+ R + YN LI+G K + + + MV+
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRIT---YNTLISGCCKEGKVKEGFELKEEMVK 564
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++PD+ TFN+L+ G C K D A L+ E ++ G PNV ++ +I G+ K +E
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
G N+ E++ E +SV L+ C G + A L D RGVL Y L+
Sbjct: 625 GENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMH 684
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G A ++DE+ K+G LP+V+ TT+I G +L + + + ++++M I P
Sbjct: 685 GLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHP 744
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ T+ +++ C +G+T +A +L + KG+ PD +TY+ +G +E + +E +
Sbjct: 745 NKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVC 804
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
+EM D TY + +DG + Q
Sbjct: 805 DEMSSGAVCLDEITYTTLIDGCHQPSTATNQ 835
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 180/382 (47%), Gaps = 19/382 (4%)
Query: 108 DHTTFLFIVRSLASSYRF-SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVK 166
+ +F ++ L +RF + LH + + N P NDG+ + V+ K
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRP--NDGLLTT---------LVSGLCK 478
Query: 167 ANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
A + + A E +L+ G+ P++ N LI+G K + L M+ +
Sbjct: 479 AGKQGE---AVELWCRLL-GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVF 534
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D +T+N LISG C+ K L EM +KG P++ +FN L+ G K DE +
Sbjct: 535 DRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLW 594
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+E + G + T +++DG C +V + L+ + + + Y L+ C
Sbjct: 595 HECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCIN 654
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
GN A + D++ +G L S ++L+ GL + +A L+++M KEG+LP+ V +
Sbjct: 655 GNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCY 714
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
++ +G+ + + S+ + P+ TY I++ G+ + + KE L+NEM +
Sbjct: 715 TTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTE 774
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
+G +PD TYN++ +GL K
Sbjct: 775 KGILPDAVTYNAFTNGLCKEGK 796
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 170/335 (50%), Gaps = 1/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V AF +A ++ MR+ RPS+ +N ++NG K + A +D M
Sbjct: 193 YNTLVAAFCRAGEVDAAERLVGVMRE-GGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ + PD V++N L+SG+C+ AL +F EM +KG P+VV+F +LI
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNL 311
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ V + +M E G + T L+DG C G + A + + + P Y L
Sbjct: 312 ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVL 371
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A E++ E+ KG P V+ +T++ G ++ A L KMLK+G+
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD++T++ L+ LC+ R DA L GL PD TY L+ G+ +E ++ +
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L +EM+ +G +PD+ TY+ +DGLS + ++ R
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN KA RM D F+ M + +G P YN L++G+ K +AL +
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAR--EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAE 285
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + V PDVVTF LI CR + A+ L +MRE+G N +F LI GF
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGF 345
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + EM E + S V +L++G C GR+ +A EL+ + +G+ P Y
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C G+ A E+ ++ KKG +P I ++LI GL R+ +A L EKML+ G
Sbjct: 406 ILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L++ C G A L KG+ PD +TY +L+ G ++ R KE +
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525
Query: 456 NLVNEMLDEGFIPDLATYNSYM 477
L+ ++ E +PD Y + M
Sbjct: 526 RLLFKLYYEDPVPDNIKYEALM 547
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN ++ A M+RD V P+V T+NIL+ C + + ALG+
Sbjct: 118 PSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176
Query: 248 F-REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+MR GC PNVV++NTL+ F + D + M E G S VT +V+GLC
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR+ A ++ + +R G+ P Y LV C G AL V E+ +KG +P V+
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI + R A L+ +M + G+ + TF L++ C G DA LLA
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDA----LLA 352
Query: 427 STK----GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + P + Y++L++GY + R E L++EM +G PD+ TY++ + G
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSG 409
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ LI+GF + D AL M R++P VV +N+LI+G+C+ + D A L EM
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P+VV+++T++ G+ D + +M++ G ++T L+ GLC E R+
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
ACEL + G+ P +F Y L++ C EGN AL + DE+ KKG LP V+ + LI
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLI 512
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL---------------LEDLCDVGRTV 417
+GL + + EA L+ K+ E +PD++ + L L+ G
Sbjct: 513 DGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMN 572
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
AD++ + DG Y +L+ G+ R + + ++L GF P+ + S +
Sbjct: 573 QADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLV 632
Query: 478 DGL 480
GL
Sbjct: 633 RGL 635
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 159/340 (46%), Gaps = 16/340 (4%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F + ++D LLA + MR+ +PSV YNVLING+ K D+A
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMRE-CRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M +KPDVVT++ ++SG+C+ D A L R+M +KG P+ +++++LIRG E
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+ + + +M++LG + T L+DG C EG V KA L + ++GVLP Y
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR--------RLRKGVEAS 385
L++ L A ++ +L+ + +P I L+ R L KG
Sbjct: 509 SVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMK 568
Query: 386 GLM-------EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
GLM + ML D ++ L+ C G + A G P+ +
Sbjct: 569 GLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTST 628
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
LV G E E +N++ E+L+ + D T + +D
Sbjct: 629 ISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV-DELWKKGNLPSVIACTTLIEGL 375
L+ R GV P + Y LV LC G AL VV D++ G P+V+ TL+
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAF 200
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R + A L+ M + G+ P VTFN ++ LC GR DA ++ + +GL PDG
Sbjct: 201 CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDG 260
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++Y+ LVSGY + E + EM +G +PD+ T+ S + + A
Sbjct: 261 VSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRA 308
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 35/379 (9%)
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMND---------------GLLAFEAMR----- 181
C + + C +F V + + N +N G+L++ A+
Sbjct: 120 CLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIR 179
Query: 182 -----KLIDG----------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
K+ +G P+V YN+LI GF + L F+ M R+ P+VV
Sbjct: 180 TKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVV 239
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N +I +C+ +K A L R M KG NPN++S+N +I G E + E + EM
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ VT L++G CN G +A L + + G+ P Y L+ +C GN
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNL 359
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A+E +D++ +G P+ TTLI+G + +A +M++M++ G P +T+N L
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C +GR DA L +G PD ++Y ++SG+ R ++ L EM+ +G
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 467 IPDLATYNSYMDGLSNARK 485
PD+ATY+S + GL R+
Sbjct: 480 SPDVATYSSLIQGLCKQRR 498
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 170/328 (51%), Gaps = 5/328 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + +M + E M R+ + R + +N LING+ F +AL +
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT---FNTLINGYCNVGNFHQALVLHA 332
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV++ + P+VVT+ LI+ C+ + A+ +MR++G +PN ++ TLI GF +
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM+E G + +T L++G C GR+ A L+ + RG +P Y
Sbjct: 393 FLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYS 452
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C A ++ E+ KG P V ++LI+GL + R+ E L ++ML
Sbjct: 453 TIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD VT+ L+ C G A RL KG PD +TY++L++G+ +++R KE
Sbjct: 513 GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ L+ ++L E +P+ TYN+ +D +N
Sbjct: 573 KRLLLKLLYEESVPNEITYNTLIDNCNN 600
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 164/324 (50%), Gaps = 3/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F A + GL F M + +G P+V YN +I+ + K R+ +A
Sbjct: 206 YNILIRGFCTAGNLEMGLXFFGEMER--NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+++++N++I+G CR + + EM ++ P+ V+FNTLI G+
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F + + + EM++ G + VT L++ +C G + +A E + RG+ P Y
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ +G A +++ E+ + G P++I LI G L + +ASGL+++M++ G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+PD V+++ ++ C A +L++ KG+ PD TY L+ G ++ R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L EML G PD TY S ++
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINA 527
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 164/343 (47%), Gaps = 16/343 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N+ KA +N + + MR P+ Y LI+GF + +A MV +
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P ++T+N LI+G C + + A GL +EM E+G P+VVS++T+I GF ++ ++
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ G T L+ GLC + R+ + C+L + G+ P + Y L+
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG+ AL + DE+ +KG P ++ LI G + + EA L+ K+L E +P+
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 401 VTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+T+N L+++ C G +ADR+ KG + Y++++ G+
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGH 648
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
++ ++ NL EML GF P T + L + K V
Sbjct: 649 SKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 173/350 (49%), Gaps = 13/350 (3%)
Query: 152 EMER--------IFHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFV 201
EMER ++ ++A+ K ++ + LL A++ L P++ YNV+ING
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL---NPNLISYNVVINGLC 284
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ + + + M + R PD VTFN LI+G+C F AL L EM + G +PNVV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++ TLI + + +M + G + T L+DG +G + +A +++ +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
G P Y L+ C G A ++ E+ ++G +P V++ +T+I G R ++
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A L +M+ +GI PD T++ L++ LC R + L + GL PD +TY L
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++ Y E + L +EM+ +GF PD+ TYN ++G + ++ R
Sbjct: 525 INAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 5/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV +N L+ V+ D + Y +M R ++ DV +FNILI FC K AL
Sbjct: 75 PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G P+VV+F+TL+ G E + E +++ ++M C + VT L++GLC
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCR 190
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL-PSVI 366
EGRV++A L+ G+ P Y +V+ +C G+ AL ++ ++ + ++ P+V+
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+GL + + +A L +M ++GI PD T+NC+++ C GR +A RL
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++P+ +TY L++ Y +E + E E L +EML G IP+ TYNS +DG +
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 168/337 (49%), Gaps = 16/337 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ F + R ++ + M RK+ P+V Y+ LIN +VK R+F +A YD
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKI---NPNVVTYSALINAYVKERKFFEAEELYD 343
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T+N +I GFC+ + D A +F M KGC+P+V +FNTLI G+ G +
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAK 403
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G + +EM E G + T L+ G C G + A +L GV P
Sbjct: 404 RIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 463
Query: 335 GLVEKLCGEGNAGIALEVVDELWKK-----------GNLPSVIACTTLIEGLRRLRKGVE 383
L++ LC G ALE+ + K G P V LI GL K +E
Sbjct: 464 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLE 523
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L ++M GI+P+++T++ ++ LC R +A ++ +K PD +T++ LVS
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GY + R +G L EM G + D TY + + G
Sbjct: 584 GYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGF 620
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 155/324 (47%), Gaps = 40/324 (12%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+LI F C + AL + ++ + +PDVVTF+ L+ G C + AL LF +M
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM- 173
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C G +
Sbjct: 174 ---CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230
Query: 313 KACEL-------------------VID-----------------FSRRGVLPKDFDYFGL 336
A L +ID +G+ P F Y +
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G A ++ E+ ++ P+V+ + LI + RK EA L ++ML GI
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P+++T+N +++ C R A+ + + +TKG PD T++ L+ GY R +G
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L++EM + G + D TYN+ + G
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGF 434
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 157/309 (50%), Gaps = 11/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN +I+GF + +A M+ ++ P+VVT++ LI+ + + +KF A L
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL 341
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM +G PN +++N++I GF + + D +M Y M GC T L+DG C
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG 401
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ EL+ + + G++ Y L+ C G+ AL++ ++ G P ++
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461
Query: 368 CTTLIEGL---RRLRKGVEASGLMEKMLKE--------GILPDSVTFNCLLEDLCDVGRT 416
C TL++GL +L+ +E M+K + G+ PD T+N L+ L + G+
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
++A+ L +G+ P+ +TY +++G +++R E + + M + F PD+ T+N+
Sbjct: 522 LEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL 581
Query: 477 MDGLSNARK 485
+ G A +
Sbjct: 582 VSGYCKAGR 590
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 170/377 (45%), Gaps = 50/377 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N + R+ + + + M + DG +P+ Y +++G K + AL +
Sbjct: 181 FTTLMNGLCREGRVVEAVALLDRMVE--DGLQPNQITYGTIVDGMCKIGDTVSALNLLRK 238
Query: 216 MVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG------------------- 255
M +KP+VV ++ +I G ++ + A L+ EM+EKG
Sbjct: 239 MEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSG 298
Query: 256 ----------------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
NPNVV+++ LI + ERKF E + EM+ G +++T
Sbjct: 299 RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYN 358
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++DG C + R+ A + + +G P F + L++ CG E++ E+ +
Sbjct: 359 SMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTET 418
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G + TLI G + A L ++M+ G+ PD VT N LL+ LCD G+ DA
Sbjct: 419 GLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 478
Query: 420 ---------DRLRLLAST--KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
++ L AS G++PD TY+IL+SG E + E E L EM G +P
Sbjct: 479 LEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538
Query: 469 DLATYNSYMDGLSNARK 485
+ TY+S ++GL +
Sbjct: 539 NTITYSSMINGLCKQSR 555
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ + A R++DG M + L+ + YN LI+GF + + AL
Sbjct: 392 FNTLIDGYCGAKRIDDGTELLHEMTETGLV---ADTTTYNTLIHGFCLVGDLNAALDLSQ 448
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-----------GCNPNVVSF 263
+M+ V PD+VT N L+ G C N K AL +F+ M++ G P+V ++
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI G E KF E + EM G +++T +++GLC + R+ +A ++
Sbjct: 509 NILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS 568
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P + LV C G LE+ E+ ++G + I TLI G R++
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNING 628
Query: 384 ASGLMEKMLKEGILPDSVTFNCLL 407
A + ++M+ G+ PD++T +L
Sbjct: 629 ALDIFQEMISSGVYPDTITIRSML 652
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P + N L++G + AL + M + + V+PDV T+NILISG
Sbjct: 457 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLI 516
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L++EM +G PN ++++++I G + + DE M M V
Sbjct: 517 NEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVV 576
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T LV G C GRV EL + RRG++ Y L+ GN AL++ E+
Sbjct: 577 TFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
G P I +++ L + A ++E +
Sbjct: 637 ISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL---IDG--- 186
IS+ CP I +C + ++ ++ D L F+AM+K +D
Sbjct: 449 QMISSGVCP----DIVTCNTL-------LDGLCDNGKLKDALEMFKAMQKSKMDLDASRP 497
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
P V YN+LI+G + +F +A Y M + P+ +T++ +I+G C+ + D
Sbjct: 498 FNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLD 557
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A +F M K +P+VV+FNTL+ G+ + D+G+ + EM G ++T L+
Sbjct: 558 EATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLP 328
G G + A ++ + GV P
Sbjct: 618 HGFRKVGNINGALDIFQEMISSGVYP 643
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS----IYNVLINGFVKCREFDKALGF 212
F+ V+ + KA R++DGL F M GR + Y LI+GF K + AL
Sbjct: 578 FNTLVSGYCKAGRVDDGLELFCEM-----GRRGIVADAITYITLIHGFRKVGNINGALDI 632
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ M+ V PD +T +++ ++ A+ + +++
Sbjct: 633 FQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 11/330 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + R ++ + M + P V YN LIN FVK +F +A YD M+
Sbjct: 262 INGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 321
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P +T++ +I GFC+ + D A +F M KGC+P++++FNTLI G+ ++ D+G+
Sbjct: 322 IIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGI 381
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +EM E G +++T L+ G C G + A +L+ + GV P L++ L
Sbjct: 382 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGL 441
Query: 341 CGEGNAGIALEVVDELWKK-----------GNLPSVIACTTLIEGLRRLRKGVEASGLME 389
C G ALE+ + K G P V LI GL K +EA L E
Sbjct: 442 CDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 501
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M GI+PD++T+N ++ LC R +A ++ +K P+ +T+ L++GY +
Sbjct: 502 EMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 561
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R +G L EM G + + TY + + G
Sbjct: 562 RVDDGLELFCEMGRRGIVANAITYITLIHG 591
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 20/337 (5%)
Query: 169 RMNDGLLAFEAMRKLIDG---RPSVSIY-----NVLINGFVKCREFDKALGFYDRMV-RD 219
+M D + A +RK+ + +P+V I+ +INGF + +A M+ R
Sbjct: 226 KMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK 285
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ PDVVT+N LI+ F + KF A L+ EM +G P+ ++++++I GF + + D
Sbjct: 286 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA 345
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+M Y M GC +T L+ G C RV +L+ + + G++ Y L+
Sbjct: 346 EHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKMLKE-- 394
C G+ A +++ E+ G P+V+ C TL++GL +L+ +E M+K +
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465
Query: 395 ------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY+ ++ G ++
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ 525
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+R E + + M + F P++ T+ + ++G A +
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 46/334 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + + +M RV + +F IL+ FC K AL
Sbjct: 76 PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P VV+F+TL+ G E + E +++ ++M C+ + VT L++GLC
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 191
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL----------- 356
EGRV++A L+ G+ P Y +V+ +C G+ AL ++ ++
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 357 -------------------WKKGNL------------PSVIACTTLIEGLRRLRKGVEAS 385
W + P V+ LI + K EA
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ML GI+P ++T++ +++ C R A+ + L +TKG PD +T++ L++GY
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R R +G L++EM + G + + TY + + G
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 22/349 (6%)
Query: 152 EMERI------FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
EM R+ F + F +++ L F + KL P+V ++ L++G
Sbjct: 105 EMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKL-GFHPTVVTFSTLLHGLCVEDR 163
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL + +M KP+VVTF L++G CR + A+ L M E G PN +++ T
Sbjct: 164 ISEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 219
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSV--------TCEILVDGLCNEGRVLKACEL 317
++ G +N+ +M E+ +V TC +++G C+ GR +A +L
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTC--MINGFCSSGRWSEAQQL 277
Query: 318 VID-FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+ + R+ + P Y L+ EG A E+ DE+ +G +PS I +++I+G
Sbjct: 278 LQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC 337
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + A + M +G PD +TFN L+ C R D +L + GL + +
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY L+ G+ + ++L+ EM+ G P++ T N+ +DGL + K
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 23/347 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ +R+++ L F M K P+V + L+NG + +A+ DRM
Sbjct: 151 FSTLLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRM 205
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSF-----NTLIRGF 270
+ D ++P+ +T+ ++ G C+ AL L R+M E PNVV + +I GF
Sbjct: 206 LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGF 265
Query: 271 FGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
++ E + EM+E VT L++ EG+ +A EL + RG++P
Sbjct: 266 CSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y +++ C + A + + KG P +I TLI G R ++ + L+
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M + G++ +++T+ L+ C VG A L + G+ P+ +T + L+ G
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG 445
Query: 450 RRKEGENLVNEMLDE-----------GFIPDLATYNSYMDGLSNARK 485
+ K+ + M G PD+ TYN + GL N K
Sbjct: 446 KLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGK 492
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 11/297 (3%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + MVR R P V+ F L+ R + D+ + L R+M +
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
N SF L++ F K ++ ++ +LG + VT L+ GLC E R+ +A
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+L + P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTF-----NCLLEDLCDVGRTVDADR-LRLLAST 428
++ V A L+ KM + I P+ V + C++ C GR +A + L+ +
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K + PD +TY+ L++ + +E + E E L +EML G IP TY+S +DG +
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 137/337 (40%), Gaps = 86/337 (25%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +NAFVK + + ++ M R +I PS Y+ +I+GF K D A +
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGII---PSTITYSSMIDGFCKQNRLDAAEHMFY 350
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M PD++TFN LI+G+CR K+ D + L EM E G N +++ TLI GF
Sbjct: 351 LMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG 410
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLC---------------------------- 306
+ ++ EM+ G + VTC L+DGLC
Sbjct: 411 DLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPF 470
Query: 307 ------------------NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
NEG+ L+A EL + RG++P Y ++ LC +
Sbjct: 471 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDE 530
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRL--------------RKGVEASGL------- 387
A ++ D + K P+V+ TTLI G + R+G+ A+ +
Sbjct: 531 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIH 590
Query: 388 --------------MEKMLKEGILPDSVTFNCLLEDL 410
++M+ G+ PD++T +L L
Sbjct: 591 GFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P+V N L++G + AL + M + + V+PDV T+NILISG
Sbjct: 429 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLI 488
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L+ EM +G P+ +++N++I G + + DE M M + V
Sbjct: 489 NEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVV 548
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L++G C GRV EL + RRG++ Y L+ GN AL++ E+
Sbjct: 549 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
G P I ++ GL + A ++E +
Sbjct: 609 MASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS----IYNVLINGFVKCREFDKALGF 212
F +N + KA R++DGL F M GR + Y LI+GF K + AL
Sbjct: 550 FTTLINGYCKAGRVDDGLELFCEM-----GRRGIVANAITYITLIHGFRKVGNINGALDI 604
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ M+ V PD +T +++G ++ A+ + +++
Sbjct: 605 FQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 35/379 (9%)
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMND---------------GLLAFEAMR----- 181
C + + C +F V + + N +N G+L++ A+
Sbjct: 120 CLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIR 179
Query: 182 -----KLIDG----------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
K+ +G P+V YN+LI GF + L F+ M R+ P+VV
Sbjct: 180 TKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVV 239
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N +I +C+ +K A L R M KG NPN++S+N +I G E + E + EM
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ VT L++G CN G +A L + + G+ P Y L+ +C GN
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNL 359
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A+E +D++ +G P+ TTLI+G + +A +M++M++ G P +T+N L
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C +GR DA L +G PD ++Y ++SG+ R ++ L EM+ +G
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 467 IPDLATYNSYMDGLSNARK 485
PD+ATY+S + GL R+
Sbjct: 480 SPDVATYSSLIQGLCKQRR 498
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 170/328 (51%), Gaps = 5/328 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + +M + E M R+ + R + +N LING+ F +AL +
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT---FNTLINGYCNVGNFHQALVLHA 332
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV++ + P+VVT+ LI+ C+ + A+ +MR++G +PN ++ TLI GF +
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQG 392
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM+E G + +T L++G C GR+ A L+ + RG +P Y
Sbjct: 393 FLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYS 452
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C A ++ E+ KG P V ++LI+GL + R+ E L ++ML
Sbjct: 453 TIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD VT+ L+ C G A RL KG PD +TY++L++G+ +++R KE
Sbjct: 513 GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ L+ ++L E +P+ TYN+ +D +N
Sbjct: 573 KRLLLKLLYEESVPNEITYNTLIDNCNN 600
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 164/324 (50%), Gaps = 3/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F A + GL F M + +G P+V YN +I+ + K R+ +A
Sbjct: 206 YNILIRGFCTAGNLEMGLFFFGEMER--NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+++++N++I+G CR + + EM ++ P+ V+FNTLI G+
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F + + + EM++ G + VT L++ +C G + +A E + RG+ P Y
Sbjct: 324 FHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTT 383
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ +G A +++ E+ + G P++I LI G L + +ASGL+++M++ G
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+PD V+++ ++ C A +L++ KG+ PD TY L+ G ++ R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L EML G PD TY S ++
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINA 527
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 176/356 (49%), Gaps = 13/356 (3%)
Query: 146 GIFSCPEMER--------IFHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNV 195
G+F EMER ++ ++A+ K ++ + LL A++ L P++ YNV
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL---NPNLISYNV 278
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+ING + + + + M + R PD VTFN LI+G+C F AL L EM + G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+PNVV++ TLI + + +M + G + T L+DG +G + +A
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+++ + G P Y L+ C G A ++ E+ ++G +P V++ +T+I G
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R ++ +A L +M+ +GI PD T++ L++ LC R + L + GL PD
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+TY L++ Y E + L +EM+ +GF PD+ TYN ++G + ++ R
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKR 574
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 164/343 (47%), Gaps = 16/343 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N+ KA +N + + MR P+ Y LI+GF + +A MV +
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P ++T+N LI+G C + + A GL +EM E+G P+VVS++T+I GF ++ ++
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ G T L+ GLC + R+ + C+L + G+ P + Y L+
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG+ AL + DE+ +KG P ++ LI G + + EA L+ K+L E +P+
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588
Query: 401 VTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+T+N L+++ C G +ADR+ KG + Y++++ G+
Sbjct: 589 ITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGH 648
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
++ ++ NL EML GF P T + L + K V
Sbjct: 649 SKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 193/428 (45%), Gaps = 23/428 (5%)
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSY 123
PT +TP+S L+F + + P + + +D L L +
Sbjct: 31 PTTKPLTPNSRLNFAHAGVAASPNAVPHR-----------AVSNDRLRGLVRRGDLEEAL 79
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCP-----EMERIFHFAVNAFVKANRMNDGLLA-- 176
R E S L SA P PC+ C E R+ + N M G
Sbjct: 80 RLVESMSGLE-PSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTG 138
Query: 177 -FEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A R+L+ P YN LI G AL D M+R PDVVT+ IL+
Sbjct: 139 QLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
C+ + A+ L EMR KGC P+++++N ++ G E + D+ + + GCE
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCE 258
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++V+ I++ GLC R A +L+ + S++G P + L+ LC G A+EV
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEV 318
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+D++ K G P+ ++ ++ + +K A +E M+ G PD V++N LL LC
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A L KG P ++Y+ ++ G T+ + KE L+NEM+ +G PD+ T
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438
Query: 473 YNSYMDGL 480
Y++ GL
Sbjct: 439 YSTISSGL 446
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 148/299 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +L+ K + +A+ D M PD++T+N++++G C+ + D A+
Sbjct: 189 PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF 248
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + GC PN VS+N +++G ++++ + EM + G + VT +L+ LC
Sbjct: 249 LKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCR 308
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A E++ + G P Y ++ C + A+ V+ + +G P +++
Sbjct: 309 RGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVS 368
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L R + A L+ ++ +G P +++N +++ L G+T +A L
Sbjct: 369 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMV 428
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
TKGL PD +TY + SG RE+R +E ++ D G P+ YN+ + GL R++
Sbjct: 429 TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRET 487
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 149/313 (47%), Gaps = 5/313 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN + R++D A E ++ L P+ YN+++ G ++ A
Sbjct: 229 YNVVVNGICQEGRVDD---AIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 285
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VVTFN+LIS CR + A+ + ++ + GC PN +S+N ++ F ++
Sbjct: 286 EMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQK 345
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 346 KMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 405
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ L G ALE+++E+ KG P +I +T+ GL R + EA K+
Sbjct: 406 TVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDM 465
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI P++V +N +L LC T +A L + + G P+ TY IL+ G T E KE
Sbjct: 466 GIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEA 525
Query: 455 ENLVNEMLDEGFI 467
L+ E+ G +
Sbjct: 526 RELLGELCSRGVV 538
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 155/310 (50%), Gaps = 7/310 (2%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+AM+ L + R P + YNV++NG + D A+ F + +P+ V++NI++
Sbjct: 209 QAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGC 291
G C ++++ A L EM +KG PNVV+FN LI F R E + I + GC
Sbjct: 269 KGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLI-SFLCRRGLVEPAMEVLDQIPKYGC 327
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+S++ ++ C + ++ +A V RG P Y L+ LC G A+E
Sbjct: 328 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVE 387
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++ +L KG P +I+ T+I+GL + K EA L+ +M+ +G+ PD +T++ + LC
Sbjct: 388 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
R +A R G+ P+ + Y+ ++ G + +L M+ G +P+ +
Sbjct: 448 REDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNES 507
Query: 472 TYNSYMDGLS 481
TY ++GL+
Sbjct: 508 TYTILIEGLT 517
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 12/303 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P ++ N + G V+ + ++AL + M LI C A G
Sbjct: 57 PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLC-------ASGR 109
Query: 248 FREMRE--KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
E R C P+V+++N ++ G+ + D + +M E S T L+ GL
Sbjct: 110 TAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGL 166
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR A ++ D RRG +P Y L+E C A++++DE+ KG P +
Sbjct: 167 CGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDI 226
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I ++ G+ + + +A ++ + G P++V++N +L+ LC R DA++L
Sbjct: 227 ITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 286
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
S KG P+ +T+++L+S R + +++++ G P+ +YN + +K
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 486 SVR 488
R
Sbjct: 347 MDR 349
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N K + E M K PSV YN +I+G+ K + KA M
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V R+ P+ +TFNILI GFCR++ A +F EM+ +G PNVV++N+LI G K
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + + +M +G + + VT L++G C + + +A E++ D +RG+ P + L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G A + + G P+V LI G R EA L ++M G+
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRL---RLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
D VT+N L++ LC G T A RL L KG + +TY++L+ G+ + + +E
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 530
Query: 454 GENLVNEMLDEGFIPDLATYNSYMD 478
L+NEML++G IP+ TY+ D
Sbjct: 531 ANRLLNEMLEKGLIPNRTTYDILRD 555
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 222/496 (44%), Gaps = 36/496 (7%)
Query: 8 LPPILIHNKSPPPPPAPSIPLPSRP--ETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPT 65
L P L + K+P P + P+ +TP ++ L H + L +K
Sbjct: 21 LDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTIS----QLIAKQHWSKLKTIVK------- 69
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ PSSLL L + Y F W H+ F ++ LA++ +
Sbjct: 70 --ETNPSSLLQHLFNSEAQPDLILCY----FKWTQKEFGAIHNVEQFCRLLHLLANAKNY 123
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEM--------ERIFHFAVNAFVKANRMNDGLLAF 177
+++ ++L+ + N SN IF + I V A+VK M+ LA
Sbjct: 124 NKIRALLDSFAKNA-HYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMD---LAL 179
Query: 178 EAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
E + D R S N ++ VK Y M+R R+ +VVTF+++I+G
Sbjct: 180 EGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGL 239
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ KF A + +M+ G +P+V+++NT+I G+ K + + EM+ +
Sbjct: 240 CKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNE 299
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
+T IL+DG C + V A ++ + R+G+ P Y L+ LC G AL + D+
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ G P+V+ LI G + + EA +++ + K G+ P+ +TFN L++ GR
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
DA LR + G+ P+ TY+ L+ G+ RE KE L EM G DL TYN
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 476 YMDGL---SNARKSVR 488
+D L RK+VR
Sbjct: 480 LVDALCKKGETRKAVR 495
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E F+ ++ F + + FE M++ G +P+V YN LING + D+ALG
Sbjct: 299 EITFNILIDGFCRDENVTAAKKVFEEMQR--QGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D+M +KP+VVT+N LI+GFC+ K A + ++ ++G PNV++FNTLI +
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D+ + M++ G + T L+ G C EG V +A +L + G+
Sbjct: 417 AGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVT 476
Query: 333 YFGLVEKLCGEGNAGIALEVVDELW---KKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y LV+ LC +G A+ ++DE+ KKG +++ LI+G K EA+ L+
Sbjct: 477 YNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLN 536
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+ML++G++P+ T++ L +++ + G D D
Sbjct: 537 EMLEKGLIPNRTTYDILRDEMMEKGFIPDID 567
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 160/305 (52%), Gaps = 7/305 (2%)
Query: 183 LIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
L+D P Y N ING K + +AL Y+RM+ + PD VTFNILI+G C+
Sbjct: 523 LLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGN 582
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
F+ A LF EM K P+V++F LI G + + ++ M LG + VT
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
LV GLC GR+ +AC+ + + G +P Y LV LC AL++V EL G
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P + L++GL + + +A ++E+M+ +G PD VT+N L++ LC G +A
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 421 RLRLLAS---TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG--FIPDLATYNS 475
RL S ++ P+ +TY +L++G + R E L+ EM+ + +P++ TYNS
Sbjct: 763 RLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822
Query: 476 YMDGL 480
++DGL
Sbjct: 823 FLDGL 827
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 197/405 (48%), Gaps = 31/405 (7%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC--P 151
+ WA+ + F+H T F F + LN + + P +F P
Sbjct: 96 QFYDWAAALPGFKH--TIFSF--------------NKYLNLLVKSGSPAKAIDLFRSRLP 139
Query: 152 EMERIFHFAVNAFVKANRMNDG----LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
R HF + ++A G L F R++ SV+ YN+++ + E
Sbjct: 140 PRCRPNHFTYSTLLRATYKAGGDVERTLGF--FRRIRSSSRSVADYNIVLQSLCRAGETA 197
Query: 208 KALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+AL F M RD V P +VT+N +I+G C++ + + LF E+ E+G +P+VV++NTL
Sbjct: 198 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTL 257
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG- 325
I +E + +M C + VT +L++GLC GR+ +A EL+ + +R+
Sbjct: 258 IDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 317
Query: 326 -VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL---PSVIACTTLIEGLRRLRKG 381
VLP Y ++ LC + A E++ L + G+L P + +TLI+GL + +
Sbjct: 318 DVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQI 376
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA + + M+ G +P+ +T+N L+ LC + A + KG+ PD +TY +L
Sbjct: 377 DEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 436
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
V + + +R E L++ M G P++ T+NS +DGL + +S
Sbjct: 437 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 191/428 (44%), Gaps = 48/428 (11%)
Query: 84 HHPQFTHYDFHI--FAWASTIDSFRHDH------------TTFLFIVRSLASSYRFSELH 129
HHP Y+ I A ++ R H T+ ++ L R E
Sbjct: 247 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEAR 306
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL-------AFEAMRK 182
++ ++ SC + I + N+F+ DGL A E MR
Sbjct: 307 ELIQEMTRK----------SCDVLPNIITY--NSFL------DGLCKQSMTAEACELMRS 348
Query: 183 LIDGR----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
L DG P ++ LI+G KC + D+A +D M+ P+V+T+N L++G C+
Sbjct: 349 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 408
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
K + A + M +KG P+V++++ L+ F + DE + + + M GC + VT
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 468
Query: 299 EILVDGLCNEGRVLKACELVIDFS-RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
++DGLC R +A ++ D + + G++P Y L++ L G AG A ++D +
Sbjct: 469 NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP 528
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P A I GL +L A + +ML+ ++PD VTFN L+ C G
Sbjct: 529 D----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L K L PD MT+ L+ G + + + ++++ M + G P++ TYN+ +
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644
Query: 478 DGLSNARK 485
GL + +
Sbjct: 645 HGLCKSGR 652
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 168/361 (46%), Gaps = 37/361 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN KA++M E+M +D P V Y+VL++ F K D+AL
Sbjct: 398 YNALVNGLCKADKMERAHAMIESM---VDKGVTPDVITYSVLVDAFCKASRVDEALELLH 454
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFF-- 271
M P+VVTFN +I G C++ + A +F +M K G P+ +++ TLI G F
Sbjct: 455 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514
Query: 272 --------------------------GERKFDE---GVNMAYEMIELGCEFSSVTCEILV 302
G K + + + M+EL VT IL+
Sbjct: 515 GRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C G +A L + + + P + L++ LC G A +++D + G
Sbjct: 575 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 634
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V+ L+ GL + + EA +E+M+ G +PDS+T+ L+ LC RT DA +L
Sbjct: 635 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G DPD +TY+ILV G + + ++ ++ EM+ +G PD+ TYN+ +D L
Sbjct: 695 VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCK 754
Query: 483 A 483
A
Sbjct: 755 A 755
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 13/334 (3%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K R+++ L E MRK D P++ YN ++G K +A R
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM-R 841
Query: 216 MVRD---RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+RD RV PD VTF+ LI G C+ + D A +F +M G PNVV++N L+ G
Sbjct: 842 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K + M M++ G +T +LVD C V +A EL+ + RG P
Sbjct: 902 TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 333 YFGLVEKLCGEGNAGIALEVVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ LC +G A ++ D++ K G P I TLI+GL R +A L++ M
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
PD+ FNC + L +G D R L PD +T++IL++G +
Sbjct: 1022 PD----PDTYAFNCCINGLSKLG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNF 1074
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ L EM+ + PD+ T+ + +DGL A +
Sbjct: 1075 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 163/329 (49%), Gaps = 11/329 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V A +A+R +D L ++ P YN+L++G K + ++A+ + MV
Sbjct: 679 VYALCRASRTDDALQLVSELKSF-GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREK---GCNPNVVSFNTLIRGFFGERKFD 277
PDVVT+N LI C+ + A L +M + C PNVV+++ LI G + D
Sbjct: 738 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRID 797
Query: 278 EGVNMAYEMIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL---PKDFD 332
E + EM+ C+ + +T +DGLC + + +ACEL+ R G L P
Sbjct: 798 EARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL-RDGSLRVSPDTVT 856
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ LC G A V D++ G +P+V+ L+ GL + K A ++E M+
Sbjct: 857 FSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV 916
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T++ L++ C +A L +++G P+ +T++ ++ G + ++
Sbjct: 917 DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSG 976
Query: 453 EGENLVNEM-LDEGFIPDLATYNSYMDGL 480
E + ++M L G PD TY + +DGL
Sbjct: 977 EAFQMFDDMTLKHGLAPDKITYCTLIDGL 1005
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 169/374 (45%), Gaps = 43/374 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ L + M +L + P +N+LI G K F++A ++ M
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLEL-ELVPDKVTFNILIAGACKAGNFEQASALFEEM 593
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V ++PDV+TF LI G C+ + + A + M G PNVV++N L+ G +
Sbjct: 594 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E EM+ GC S+T LV LC R A +LV + G P Y L
Sbjct: 654 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---------RRLRKGV----- 382
V+ L G A+ V++E+ KG+ P V+ TLI+ L RRL +
Sbjct: 714 VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773
Query: 383 ------------------------EASGLMEKMLKEG--ILPDSVTFNCLLEDLCDVGRT 416
EA L+++M+++ +LP+ +T+N L+ LC
Sbjct: 774 RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833
Query: 417 VDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+A L L + + PD +T+ L+ G + + E N+ ++M+ G++P++ TYN
Sbjct: 834 AEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYN 893
Query: 475 SYMDGLSNARKSVR 488
M+GL K R
Sbjct: 894 VLMNGLCKTDKMER 907
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 57/379 (15%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GR----PSVSIYNVLINGFVKCREFDKAL 210
F ++ KA ++ EA R ++D G P+V YN L++G K ++A
Sbjct: 605 FGALIDGLCKAGQV-------EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 657
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
F + MV PD +T+ L+ CR + D AL L E++ G +P+ V++N L+ G
Sbjct: 658 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 717
Query: 271 FGERKFDEGVNMAYEMIELG--------------------------------------CE 292
+ + ++ + + EM+ G C
Sbjct: 718 WKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCV 777
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRG--VLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT +L++GLC GR+ +A EL+ + R+ VLP Y ++ LC + A
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837
Query: 351 EVVDELWKKGNL---PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
E++ L + G+L P + +TLI+GL + + EA + + M+ G +P+ VT+N L+
Sbjct: 838 ELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC + A + KG+ PD +TY +LV + + + E L++ M G
Sbjct: 897 NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956
Query: 468 PDLATYNSYMDGLSNARKS 486
P++ T+NS +DGL + +S
Sbjct: 957 PNVVTFNSIIDGLCKSDQS 975
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 43/308 (13%)
Query: 187 RPSVSIYNVLINGFVKCR-EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
RP+ Y+ L+ K + ++ LGF+ R+ V +NI++ CR + AL
Sbjct: 143 RPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRS--VADYNIVLQSLCRAGETARAL 200
Query: 246 GLFR-EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+FR EM G P +V++NT+I +G
Sbjct: 201 EIFRGEMARDGVAPTIVTYNTII-----------------------------------NG 225
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC + EL + RG P Y L++ LC G+ A + ++ + +P+
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEG--ILPDSVTFNCLLEDLCDVGRTVDADRL 422
V+ + LI GL ++ + EA L+++M ++ +LP+ +T+N L+ LC T +A L
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345
Query: 423 --RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + + PD +T+ L+ G + + E ++ ++M+ G++P++ TYN+ ++GL
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405
Query: 481 SNARKSVR 488
A K R
Sbjct: 406 CKADKMER 413
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 97/263 (36%), Gaps = 69/263 (26%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ K + ++ F+ M I G P+V YNVL+NG K + ++A +
Sbjct: 857 FSTLIDGLCKCGQTDEACNVFDDM---IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIE 913
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN---------- 264
MV V PDV+T+++L+ FC+ D AL L M +GC PNVV+FN
Sbjct: 914 SMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSD 973
Query: 265 --------------------------TLIRGFF--------------------------- 271
TLI G F
Sbjct: 974 QSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCI 1033
Query: 272 -GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
G K + + M+EL VT IL+ G C G +A L + + + P
Sbjct: 1034 NGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 1093
Query: 331 FDYFGLVEKLCGEGNAGIALEVV 353
+ L++ LC G +++
Sbjct: 1094 MTFGALIDGLCKAGQVEATWDIM 1116
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 148/298 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+LI GF E K LG + M R+ P+VVT+N LI +C+ + D A GL
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M KG PN++S+N +I G E E + EM G VT L++G C
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG +A + + R GV P Y L+ +C N A+E D++ +G P+
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G R EA ++ +M + G P VT+N + C + R +A +
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KGL PD ++Y ++SG+ R+ + EM+++G PD TY+S + GL R+
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 164/328 (50%), Gaps = 18/328 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N+ KA +N + F+ MR I G RP+ Y LI+GF + ++A + M
Sbjct: 157 INSMCKARNLNRAMEFFDQMR--IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 214
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P VVT+N I G C ++ + ALG+ +EM EKG P+VVS++T+I GF + + D
Sbjct: 215 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRA 274
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M EM+E G +VT L+ GLC R+ +AC+L + G+ P +F Y L+
Sbjct: 275 FQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 334
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ AL + DE+ KG LP + + LI GL + + EA L+ K++ E +P
Sbjct: 335 YCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 394
Query: 400 SVTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
VT++ L+E+ C G +ADR+ + P Y++++ G
Sbjct: 395 DVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 454
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ R + NL EM+ GF+P T
Sbjct: 455 HCRGGNLPKAFNLYKEMIHSGFVPHTVT 482
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 162/323 (50%), Gaps = 3/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F + GL F M + +G P+V YN LI+ + K D+A G
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMER--NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++P+++++N++I+G CR A + EM KG P+ V++NTL+ G+ E
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F + + + EM+ G S VT L++ +C + +A E RG+ P + Y
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ +G A +++E+ + G PSV+ I G L + EA G++++M+++G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V+++ ++ C G A +++ KG+ PD +TY L+ G R E
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310
Query: 456 NLVNEMLDEGFIPDLATYNSYMD 478
+L EMLD G PD TY + ++
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLIN 333
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + M + E M P YN L+NG+ K F +AL + M
Sbjct: 83 YNVIINGLCREGSMKEAWEILEEM-GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR+ V P VVT+ LI+ C+ + + A+ F +MR +G PN ++ TLI GF +
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 201
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM E G S VT + G C R+ +A +V + +G+ P Y +
Sbjct: 202 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 261
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +G A ++ E+ +KG P + ++LI+GL +R+ EA L ++ML G+
Sbjct: 262 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L+ C G A L KG PD +TY +L++G ++ R +E +
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ +++ E +P TY++ ++ SN
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSN 407
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 138/265 (52%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R RV P+V T+NILI GFC + LG F EM GC PNVV++NTLI + +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + M G + + ++ ++++GLC EG + +A E++ + +G P + Y
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C EGN AL + E+ + G PSV+ T LI + + R A ++M G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ T+ L++ G +A R+ + G P +TY+ + G+ R +E
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+V EM+++G PD+ +Y++ + G
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGF 265
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 175/350 (50%), Gaps = 13/350 (3%)
Query: 152 EMER--------IFHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFV 201
EMER ++ ++A+ K R+++ GLL + + + +P++ YNV+ING
Sbjct: 35 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGM---QPNLISYNVIINGLC 91
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ +A + M PD VT+N L++G+C+ F AL + EM G +P+VV
Sbjct: 92 REGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 151
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++ LI R + + +M G + T L+DG +G + +A ++ +
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+ G P Y + C AL VV E+ +KG P V++ +T+I G R +
Sbjct: 212 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 271
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A + ++M+++G+ PD+VT++ L++ LC++ R +A L GL PD TY L
Sbjct: 272 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++ Y E + +L +EM+ +GF+PD TY+ ++GL+ ++ R
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
R V P + Y L+ C G L E+ + G LP+V+ TLI+ ++ +
Sbjct: 3 RSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA GL++ M +G+ P+ +++N ++ LC G +A + KG PD +TY+ L+
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+GY +E + + EM+ G P + TY + ++ + AR
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 164
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 59/303 (19%)
Query: 162 NAFVKAN----RMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
NAF+ + RM + L + M + L P V Y+ +I+GF + E D+A
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLA---PDVVSYSTIISGFCRKGELDRAFQMKQE 280
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV V PD VT++ LI G C ++ A L +EM + G P+ ++ TLI + E
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGL------------------------------ 305
++ +++ EMI G +VT +L++GL
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 400
Query: 306 --------------------CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
C +G + +A + R P + Y ++ C GN
Sbjct: 401 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 460
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A + E+ G +P + TLI+ L + E S ++ L+ L ++
Sbjct: 461 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKV 520
Query: 406 LLE 408
L+E
Sbjct: 521 LVE 523
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 103/277 (37%), Gaps = 31/277 (11%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI-FSCPEMERIFHFAVNAFVK 166
D T+ +++ L R +E C S + + P E + +NA+
Sbjct: 289 DAVTYSSLIQGLCEMRRLTE-----------ACDLSQEMLDMGLPPDEFTYTTLINAYCV 337
Query: 167 ANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+N L L E + K P Y+VLING K +A +++ + P
Sbjct: 338 EGDLNKALHLHDEMIHKGF--LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 395
Query: 226 VTFNILI---------------SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
VT++ LI GFC A +F M E+ P +N +I G
Sbjct: 396 VTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGH 455
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ N+ EMI G +VT L+ L EG + E++ D R L +
Sbjct: 456 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEA 515
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LVE EGN L V L+ K +L V +
Sbjct: 516 ELAKVLVEINHKEGNMEAVLN-VSRLYNKLSLKCVAS 551
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 170/335 (50%), Gaps = 12/335 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++ K R D F M++ P++ YN +INGF + +A
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEK-GISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++ PDVVTF++LI+ + KF A L+ EM +G PN +++N++I GF + +
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D M Y M GC +T IL+DG C RV +L+ + SRRG++ Y
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKML 392
L+ C GN AL+++ E+ G P+V+ C TL++GL +L+ +E +M+K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 393 KE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ + PD T+N L+ L + G+ +A+ L +GL PD +TY+ ++ G
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+++R E + + M +GF PD+ T+ + ++G
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING 583
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 170/331 (51%), Gaps = 14/331 (4%)
Query: 169 RMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+M D + A +RK+ + +P+V IY+ +I+G K A + M + P++
Sbjct: 224 KMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNL 283
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N +I+GFC + ++ A L REM E+ +P+VV+F+ LI E KF E + E
Sbjct: 284 FTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNE 343
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G +++T ++DG + R+ A + + +G P + L++ CG
Sbjct: 344 MLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKR 403
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
++++ E+ ++G + + I TTLI G +L A L+++M+ G+ P+ VT N
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT 463
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LC+ G+ DA + +++ +K ++PD TY+IL+ G E + E
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L EM G +PD TYNS +DGL +
Sbjct: 524 EELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 164/348 (47%), Gaps = 16/348 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F +NA VK + + + M R +I P+ YN +I+GF K D A +
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGII---PNTITYNSMIDGFSKQNRLDAAERMFY 377
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M PDV+TF+ILI G+C K+ D + L EM +G N +++ TLI GF
Sbjct: 378 LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLG 437
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL--VIDFSR--------- 323
+ +++ EMI G + VTC L+DGLCN G++ A E+ V+ S+
Sbjct: 438 NLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPF 497
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
V P Y L+ L EG A E+ +E+ +G +P I ++I+GL + + E
Sbjct: 498 NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDE 557
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A+ + + M +G PD VTF L+ C VGR D + +G+ + +TY L+
Sbjct: 558 ATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIH 617
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
G+ + ++ EM+ G PD T + + GL + + R +
Sbjct: 618 GFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 159/299 (53%), Gaps = 5/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V + L+ V+ D + + +M R+ ++ +F ILI FC K AL
Sbjct: 74 PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P++V+F+TL+ G E + E ++ +++ C+ + + L++GLC
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCR 189
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL-PSVI 366
EGRV++A L+ G+ P Y +V+ +C G+ AL ++ ++ + + P+V+
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+GL + + +A L +M ++GI P+ T+NC++ C GR +A RL
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + PD +T+ +L++ +E + E E L NEML G IP+ TYNS +DG S +
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V + L+NG + +A+ DRMV D ++P+ +T+ ++ G C+ AL
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233
Query: 247 LFREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L R+M E PNVV ++ +I G + + + + N+ EM E G + T +++G
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C+ GR +A L+ + R + P + L+ L EG A E+ +E+ +G +P+
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I ++I+G + + A + M +G PD +TF+ L++ C R D +L
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
S +GL + +TY L+ G+ + +L+ EM+ G P++ T N+ +DGL N K
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 203/421 (48%), Gaps = 28/421 (6%)
Query: 74 LLHFLKSKLHHHPQFTHYDFHIFAWASTID-SFRHDH----------TTFLFIVRSLASS 122
LL +KS FTH I A A+ D DH T+ ++ + A +
Sbjct: 134 LLEEMKSAGFAPDAFTHTPI-ITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARA 192
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
+ E +L + CP P + ++ V+A K + + A + ++K
Sbjct: 193 KKLEEAMKLLEEMRERGCP---------PNL-VTYNVLVDALCKLSMVG---AAQDVVKK 239
Query: 183 LIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+I+G P+V +N L++GF K D A MV ++P+VVT++ LI G C+++K
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
F A + EM+ +G P+ +++ LI G K +E M M GC V
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++ C G++L+A + + + ++ P Y +++ LC G A +++++ + G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 361 N-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ LP V+ +T+I GL + VEA L+++M K G PD VT+ +++ LC GR +A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L G P+ +TY L+SG + + E E ++ EM + G P+L TYN+ ++G
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 480 L 480
L
Sbjct: 540 L 540
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 162/326 (49%), Gaps = 2/326 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ AF +A ++ + + E MR+ P++ YNVL++ K A +M+
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+V+TFN L+ GFC+ D A L M KG PNVV+++ LI G +KF E
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G + T L+ GLC ++ +A +++ + G P Y ++
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG-ILPD 399
C G A + + E+ K+ P V+ T+I+GL +L K EA ++E+M + G +LPD
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT++ ++ LC V+A +L G +PD +TY ++ G + R +E E L+
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 484
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
M G P++ TY + + GL ARK
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARK 510
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 161/349 (46%), Gaps = 36/349 (10%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVS----IYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
N + D LA R P S +N L+ V+C++ +A + + +P
Sbjct: 51 NSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEP 110
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREM-------------------------------- 251
DV ++NI+ISGFC AL L EM
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
R GC+PNVV++ LI F +K +E + + EM E GC + VT +LVD LC V
Sbjct: 171 RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMV 230
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A ++V G P + LV+ C GN A +++ + KG P+V+ + L
Sbjct: 231 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+GL + +K +EA ++E+M G+ PD+ T++ L+ LC + +A+++ + G
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD + Y ++ + + + E + + EM + PD+ TYN+ +DGL
Sbjct: 351 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 399
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 161/332 (48%), Gaps = 14/332 (4%)
Query: 157 FHFAVNAFVKANRMND-----GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
F+ V+ F K ++D G++ + MR P+V Y+ LI+G K ++F +A
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMR------PNVVTYSALIDGLCKSQKFLEAKE 305
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M V PD T++ LI G C+ K + A + R M GC P+VV ++++I F
Sbjct: 306 VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKD 330
K E EM + VT ++DGLC G++ +A ++ G VLP
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y ++ LC A +++D + K G P V+ TT+I+GL + + EA L++
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G P+ VT+ L+ LC + +A+R+ G P+ +TY+ +V+G R
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 451 RKEGENLVNEMLD--EGFIPDLATYNSYMDGL 480
KE + LV M D PD ATY + ++ L
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 577
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y+ LI+G K + ++A RM PDVV ++ +I FC++ K A
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLC 306
+EMR++ +P+VV++NT+I G K E + +M E G V T +++GLC
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+++A +L+ + G P Y +++ LC G A ++ + + G P+V+
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RL 424
TTLI GL + RK EA +ME+M G P+ VT+N ++ LC GR +A +L R+
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
PD TY +V+ + +E E L+ +M
Sbjct: 557 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + Y +M R +++ D+ +F ILI FC K AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+FNTL+ G E + E +N+ ++M E C + VT L++GLC
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGR+++A L+ G+ P Y +V+ +C +G+ AL ++ ++ + + +P+V+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+ L + + +A L +M ++GI PD T+N ++ C GR DA++L
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + PD +TY+ L++ + +E + E E L +EML G IP+ TY+S +DG +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + + +LI F C + AL + ++ + + PDVVTFN L+ G C + AL
Sbjct: 111 RCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALN 170
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M E C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230
Query: 307 NEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+G + A L+ ++P Y +++ LC +G A + E+ +KG P +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++I G + +A L+++ML+ I PD VT+N L+ G+ +A+ L
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ P+ +TY ++ G+ ++NR E++ M +G P+L T+N+ +DG A++
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 51/372 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + R +D + M RK+ P V YN LIN FVK +F +A YD
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKI---SPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T++ +I GFC+ + D A +F M KGC+PN+++FNTLI G+ G +
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409
Query: 275 KFDEGVNMAYEMIELGCEFSS-----------------------------------VTCE 299
+ D+G+ + +EM E G + VTC+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 300 ILVDGLCNEGRVLKACEL--VIDFSRR---------GVLPKDFDYFGLVEKLCGEGNAGI 348
L+DGLC+ G++ A E+ V+ S++ GV P Y L+ L EG
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E+ +E+ +G +P I +++I+GL + + EA+ + + M + P+ VTF L+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C GR D L +G+ + +TY L+ G+ + ++ EM+ G P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 469 DLATYNSYMDGL 480
D T + + GL
Sbjct: 650 DTITIRNMLTGL 661
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 14/337 (4%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ D + A +RK+ + P+V IY+ +I+ K A + M + PD+
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N +I GFC + ++ A L +EM E+ +P+VV++N LI F E KF E + E
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G +++T ++DG C + R+ A + + +G P + L++ CG
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+E++ E+ + G + TLI G + A L+++M+ G+ PD VT +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LCD G+ DA + +++ +K G++PD TY+IL+SG E + E
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L EM G +PD TY+S +DGL + T+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K R +D F M++ G P + YN +I GF + A
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDVVT+N LI+ F + KF A L+ EM +G PN ++++++I GF +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D +M Y M GC + +T L+DG C R+ EL+ + + G++ Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
L+ G+ AL+++ E+ G P ++ C TL++GL +L+ +E +M+K
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 392 LKE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
K+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +++R E + + M + F P++ T+ + ++G A +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + M+R R P VV F L+ R ++ DL + L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
++ SF LI+ F K ++ ++ +LG VT L+ GLC E RV +A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ V A L+ KM + I+P+ V ++ +++ LC GR DA L KG+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ ++ G+ R + E L+ EML+ PD+ TYN+ ++ K
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VK 222
A + ++++I P + + L++G + AL + M + + V+
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+NILISG KF A L+ EM +G P+ ++++++I G + + DE M
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M + VT L++G C GRV EL + RRG++ Y L+
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
GN AL++ E+ G P I ++ GL + A ++EK+
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 182/378 (48%), Gaps = 25/378 (6%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R D T +++ L++S R +E VL C D A NA V
Sbjct: 93 RPDAGTCAALIKKLSASGRTAEARRVLA-------ACGPD------------VMAYNAMV 133
Query: 166 KANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A G L +A R+L+ P YN LI G AL D M+R R
Sbjct: 134 -AGYCGAGQL--DAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV 190
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDVVT+ IL+ C+ + A+ L EMR+KGC P++V++N ++ G E + D+ +
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ GCE ++V+ I++ GLC R A EL+ + ++G P + L+ LC
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+G ALEV++++ K G P+ ++ L+ + +K +A ++ M+ G PD V+
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N LL LC G A L KG P ++Y+ ++ G T+ + KE L+NEM+
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430
Query: 463 DEGFIPDLATYNSYMDGL 480
+G PD+ TY++ GL
Sbjct: 431 SKGLQPDIITYSTIAAGL 448
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 188/407 (46%), Gaps = 22/407 (5%)
Query: 86 PQFTHYDFHIFAW--ASTIDSFRH---------DHTTFLFIVRSLASSYRFSELHSVLNF 134
P Y+ + + A +D+ R D T+ ++R L R + +VL+
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 183
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
+ C P++ + + A K + + + MR P + YN
Sbjct: 184 MLRRRC---------VPDVV-TYTILLEATCKRSGYKQAMKLLDEMRDK-GCTPDIVTYN 232
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
V++NG + D A+ F + +P+ V++NI++ G C ++++ A L EM +K
Sbjct: 233 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 292
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
GC PNVV+FN LI + + + + ++ + GC +S++ L+ C + ++ KA
Sbjct: 293 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 352
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+ RG P Y L+ LC G +A+E++ +L KG P +I+ T+I+G
Sbjct: 353 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + K EA L+ +M+ +G+ PD +T++ + LC R DA R G+ P+
Sbjct: 413 LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 472
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ Y+ ++ G + +L M+ G +P+ +TY ++GL+
Sbjct: 473 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 519
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 7/311 (2%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
EA R L P V YN ++ G+ + D A M V+PD T+N LI G C
Sbjct: 114 EARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCG 170
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ AL + EM + C P+VV++ L+ + + + + EM + GC VT
Sbjct: 171 RGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVT 230
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
++V+G+C EGRV A E + + G P Y +++ LC A E++ E+
Sbjct: 231 YNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMG 290
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+KG P+V+ LI L RKG+ L +E++ K G P+S+++N LL C +
Sbjct: 291 QKGCPPNVVTFNMLISFL--CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L ++G PD ++Y+ L++ R L++++ D+G P L +YN+
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408
Query: 476 YMDGLSNARKS 486
+DGL+ A K+
Sbjct: 409 VIDGLTKAGKT 419
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN + R++D A E ++ L P+ YN+++ G ++ A
Sbjct: 231 YNVVVNGICQEGRVDD---AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 287
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VVTFN+LIS CR + AL + ++ + GC PN +S+N L+ F ++
Sbjct: 288 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 347
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 348 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 407
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
+++ L G ALE+++E+ KG P +I +T+ GL R+ + A G ++ M
Sbjct: 408 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 467
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
GI P++V +N ++ LC T A L G P+ TY IL+ G E
Sbjct: 468 ---GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 524
Query: 452 KEGENLVNEMLDEGFI 467
KE +L++E+ G +
Sbjct: 525 KEARDLLDELCSRGVV 540
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E + +L D P + YN +I+G K + +AL + MV ++PD++T++ +
Sbjct: 386 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 445
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G CR + + A+ F ++++ G PN V +N +I G R+ +++ MI GC
Sbjct: 446 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ T IL++GL EG + +A +L+ + RGV+ K G + L
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 553
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + Y +M R +++ D+ +F ILI FC K AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+FNTL+ G E + E +N+ ++M E C + VT L++GLC
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGR+++A L+ G+ P Y +V+ +C +G+ AL ++ ++ + + +P+V+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+ L + + +A L +M ++GI PD T+N ++ C GR DA++L
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + PD +TY+ L++ + +E + E E L +EML G IP+ TY+S +DG +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + + +LI F C + AL + ++ + + PDVVTFN L+ G C + AL
Sbjct: 111 RCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALN 170
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M E C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230
Query: 307 NEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+G + A L+ ++P Y +++ LC +G A + E+ +KG P +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++I G + +A L+++ML+ I PD VT+N L+ G+ +A+ L
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ P+ +TY ++ G+ ++NR E++ M +G P+L T+N+ +DG A++
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 51/372 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + R +D + M RK+ P V YN LIN FVK +F +A YD
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKI---SPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T++ +I GFC+ + D A +F M KGC+PN+++FNTLI G+ G +
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409
Query: 275 KFDEGVNMAYEMIELGCEFSS-----------------------------------VTCE 299
+ D+G+ + +EM E G + VTC+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 300 ILVDGLCNEGRVLKACEL--VIDFSRR---------GVLPKDFDYFGLVEKLCGEGNAGI 348
L+DGLC+ G++ A E+ V+ S++ GV P Y L+ L EG
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E+ +E+ +G +P I +++I+GL + + EA+ + + M + P+ VTF L+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C GR D L +G+ + +TY L+ G+ + ++ EM+ G P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 469 DLATYNSYMDGL 480
D T + + GL
Sbjct: 650 DTITIRNMLTGL 661
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 14/337 (4%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ D + A +RK+ + P+V IY+ +I+ K A + M + PD+
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N +I GFC + ++ A L +EM E+ +P+VV++N LI F E KF E + E
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G +++T ++DG C + R+ A + + +G P + L++ CG
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+E++ E+ + G + TLI G + A L+++M+ G+ PD VT +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LCD G+ DA + +++ +K G++PD TY+IL+SG E + E
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L EM G +PD TY+S +DGL + T+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K R +D F M++ G P + YN +I GF + A
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDVVT+N LI+ F + KF A L+ EM +G PN ++++++I GF +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D +M Y M GC + +T L+DG C R+ EL+ + + G++ Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
L+ G+ AL+++ E+ G P ++ C TL++GL +L+ +E +M+K
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 392 LKE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
K+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +++R E + + M + F P++ T+ + ++G A +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + M+R R P VV F L+ R ++ DL + L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
++ SF LI+ F K ++ ++ +LG VT L+ GLC E RV +A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ V A L+ KM + I+P+ V ++ +++ LC GR DA L KG+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ ++ G+ R + E L+ EML+ PD+ TYN+ ++ K
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VK 222
A + ++++I P + + L++G + AL + M + + V+
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+NILISG KF A L+ EM +G P+ ++++++I G + + DE M
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M + VT L++G C GRV EL + RRG++ Y L+
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
GN AL++ E+ G P I ++ GL + A ++EK+
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + Y +M R +++ D+ +FNILI FC K AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+F TL+ G E + E +N+ ++M E C + VT L++GLC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGR+++A L+ G+ P Y +V+ +C +G+ AL ++ ++ + + +P+V+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+ L + + +A L +M ++GI PD T+N ++ C GR DA++L
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + PD +TY+ L++ + +E + E E L +EML G IP+ TY+S +DG +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +N+LI F C + AL + ++ + + PDVVTF L+ G C + AL
Sbjct: 111 RCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALN 170
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M E C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230
Query: 307 NEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+G + A L+ ++P Y +++ LC +G A + E+ +KG P +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++I G + +A L+++ML+ I PD VT+N L+ G+ +A+ L
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ P+ +TY ++ G+ ++NR E++ M +G P+L T+N+ +DG A++
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 51/372 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + R +D + M RK+ P V YN LIN FVK +F +A YD
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKI---SPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T++ +I GFC+ + D A +F M KGC+PN+++FNTLI G+ G +
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409
Query: 275 KFDEGVNMAYEMIELGCEFSS-----------------------------------VTCE 299
+ D+G+ + +EM E G + VTC+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 300 ILVDGLCNEGRVLKACEL--VIDFSRR---------GVLPKDFDYFGLVEKLCGEGNAGI 348
L+DGLC+ G++ A E+ V+ S++ GV P Y L+ L EG
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E+ +E+ +G +P I +++I+GL + + EA+ + + M + P+ VTF L+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C GR D L +G+ + +TY L+ G+ + ++ EM+ G P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 469 DLATYNSYMDGL 480
D T + + GL
Sbjct: 650 DTITIRNMLTGL 661
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 14/337 (4%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ D + A +RK+ + P+V IY+ +I+ K A + M + PD+
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N +I GFC + ++ A L +EM E+ +P+VV++N LI F E KF E + E
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G +++T ++DG C + R+ A + + +G P + L++ CG
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+E++ E+ + G + TLI G + A L+++M+ G+ PD VT +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LCD G+ DA + +++ +K G++PD TY+IL+SG E + E
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L EM G +PD TY+S +DGL + T+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K R +D F M++ G P + YN +I GF + A
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDVVT+N LI+ F + KF A L+ EM +G PN ++++++I GF +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D +M Y M GC + +T L+DG C R+ EL+ + + G++ Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
L+ G+ AL+++ E+ G P ++ C TL++GL +L+ +E +M+K
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 392 LKE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
K+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +++R E + + M + F P++ T+ + ++G A +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 1/291 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + M+R R P VV F L+ R ++ DL + L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
++ SFN LI+ F K ++ ++ +LG VT L+ GLC E RV +A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ V A L+ KM + I+P+ V ++ +++ LC GR DA L KG+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ ++ G+ R + E L+ EML+ PD+ TYN+ ++ K
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VK 222
A + ++++I P + + L++G + AL + M + + V+
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+NILISG KF A L+ EM +G P+ ++++++I G + + DE M
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M + VT L++G C GRV EL + RRG++ Y L+
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
GN AL++ E+ G P I ++ GL + A ++EK+
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 183/381 (48%), Gaps = 14/381 (3%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
F+H +T+ ++ L +F + VL + N +E ++ A+
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN---------VGNHMLEGVYVGAMKN 85
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VK 222
+ + ++ + + FE M D P+V YN +++ V FD+A Y RM RDR +
Sbjct: 86 YGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM-RDRGIT 143
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV +F I + FC+ + AL L M +GC NVV++ T++ GF+ E EG +
Sbjct: 144 PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKLC 341
+M+ G T L+ LC +G V K CE ++D +RGVLP F Y ++ LC
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDV-KECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A+ +V L ++G P VI LI GL + K EA + KM+ EG+ PDS
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N L+ C G A+R+ A G PD TY L+ G E L NE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 462 LDEGFIPDLATYNSYMDGLSN 482
L +G P++ YN+ + GLSN
Sbjct: 383 LGKGIKPNVILYNTLIKGLSN 403
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 189/381 (49%), Gaps = 17/381 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI-FHFAVNAFVK 166
D +F ++S + R +LN +S+ C EM + + V F +
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC-----------EMNVVAYCTVVGGFYE 193
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
N +G +E K++ S+ S +N L+ K + + D++++ V P+
Sbjct: 194 ENFKAEG---YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ T+N+ I G C+ + D A+ + + E+G P+V+++N LI G KF E
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+ G E S T L+ G C G V A +V D G +P F Y L++ LC EG
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + +E KG P+VI TLI+GL +EA+ L +M ++G++P+ TFN
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ LC +G DAD L + +KG PD T++IL+ GY+ + + + +++ MLD
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 465 GFIPDLATYNSYMDGLSNARK 485
G PD+ TYNS ++GL K
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSK 511
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN LI G K +F +A + +MV + ++PD T+N LI+G+C+ LA
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + G P+ ++ +LI G E + + + + E + G + + + L+ GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
N+G +L+A +L + S +G++P+ + LV LC G A +V + KG P +
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G K A +++ ML G+ PD T+N LL LC + D
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG P+ T++IL+ R + E L+ EM ++ PD T+ + +DG
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 143/300 (47%), Gaps = 11/300 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++ + +M + L + M L +G P V YN L+NG K +F+ + Y
Sbjct: 464 FNILIHGYSTQLKMENALEILDVM--LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV P++ TFNIL+ CR +K D ALGL EM+ K NP+ V+F TLI GF
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 276 FDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D + +M E S+ T I++ + V A +L + R + P + Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V+ C GN + + + E+ + G +PS+ +I L + EA+G++ +M+++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 395 GILPDSVTFNCLLEDLCDVGRT-VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G++P++V +CDV + V A +L L K Y +L G + RK+
Sbjct: 702 GLVPEAVN------TICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRKK 755
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 3/292 (1%)
Query: 197 INGFVKCREFD-KALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+ +KC++ KAL ++ M ++ K + T+ +I KF+ + +MRE
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 255 GCNPNVVSFNTLIRGFFGER-KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
N + +G + K E VN+ M CE + + ++ L + G +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A ++ + RG+ P + + ++ C AL +++ + +G +V+A T++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G E L KML G+ TFN LL LC G + ++L +G+ P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ TY++ + G + +V ++++G PD+ TYN+ + GL K
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 170/329 (51%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+A K+ R++D L E M + P+V YN LINGF K D+A+ +++M
Sbjct: 239 YTILVDALCKSARISDASLILEDMIE-AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PDV T+NILI G+C+ ++ L +EM + GC PN +++NTL+ K+
Sbjct: 298 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 357
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ N+A M+ C+ S T +++D C G++ A EL + RG LP + Y +
Sbjct: 358 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 417
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C A ++++ + + G P V+ +++ GL + + EA + E + G
Sbjct: 418 ISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 477
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VT + L++ LC R DA++L G PD + Y IL+ G+ + ++ +
Sbjct: 478 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 537
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+EMLD+G +P + TY+ +D L + +
Sbjct: 538 FFSEMLDKGCVPTVITYSIVIDKLCKSAR 566
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 166/326 (50%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ VK+ + D LA +R+ D +PS +N++I+ F K + D A +
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRR--DCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M PD+ T+NI+ISG CR + D A L M E GC P+VV++N+++ G +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 276 FDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + YE++ G F VTC L+DGLC R+ A +L+ + R G P Y
Sbjct: 462 VDEAYEV-YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C +L E+ KG +P+VI + +I+ L + + + L++ ML+
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD++ + +++ LC +A L L G P +TY++LV + +R E
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+L+ M +G +PD TYNS DG
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGF 666
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 162/325 (49%), Gaps = 2/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AFV+ + + F+ R + S++ Y+ LINGF K R+F +A D M +
Sbjct: 139 LSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT-YSTLINGFCKARDFQQAYRLLDEMEKRG 197
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P +N +I G C N + D AL +R+M ++ C P+V+++ L+ + +
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDAS 256
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +MIE GC + VT L++G C G + +A L P F Y L++
Sbjct: 257 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 316
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + +++ E+ K G P+ I TL++ L + K ++A L + ML+ P
Sbjct: 317 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 376
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
TFN +++ C VG+ A L L + +G PD TY+I++SG R NR + L+
Sbjct: 377 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 436
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + G PD+ TYNS + GL A +
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKASQ 461
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 1/309 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ +ANR++D E M + P V YN +++G K + D+A Y+ +
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
DVVT + LI G C++++ D A L REM G P+VV++ LI GF +
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM++ GC + +T I++D LC RV C L+ RGV P Y +
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSV 592
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC + A E+ + + G P+V+ L++ L ++ + EA L+E M +G
Sbjct: 593 IDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGC 652
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD+VT+N + + A RL ++G P Y +L++ E + +
Sbjct: 653 LPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAME 712
Query: 457 LVNEMLDEG 465
+ E L+ G
Sbjct: 713 IWEEALEAG 721
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 1/292 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L++ FV+ ++ +A + PD +T++ LI+GFC+ + F A L EM +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P+ +NT+I+G + D + + Y ++ C S +T ILVD LC R+
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILVDALCKSARISD 254
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A ++ D G P Y L+ C GN A+ + +++ + P V LI+
Sbjct: 255 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 314
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + + + + L+++M+K G P+ +T+N L++ L G+ +DA L + + P
Sbjct: 315 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 374
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
T+++++ + + + L M D G +PD+ TYN + G A +
Sbjct: 375 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANR 426
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 127/275 (46%), Gaps = 2/275 (0%)
Query: 205 EFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ DKA+ F+D + K T N L+S F R KK A LF+ R C+P+ +++
Sbjct: 111 DLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITY 170
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
+TLI GF R F + + EM + G + ++ GLC+ GRV A D +
Sbjct: 171 STLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-Q 229
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
R P Y LV+ LC A +++++ + G P+V+ TLI G +L E
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L +ML+ PD T+N L++ C R D +L G +P+ +TY+ L+
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ + + NL ML P T+N +D
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMID 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ K++ ++ ++ M++ P+V YNVL++ K D+A+ +
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQ-TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D PD VT+N + GF ++ + D A LF+ M+ +GC+P ++ L+ E K
Sbjct: 647 MESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEK 706
Query: 276 FDEGVNMAYEMIELGCE 292
D+ + + E +E G +
Sbjct: 707 MDQAMEIWEEALEAGAD 723
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 149/292 (51%), Gaps = 3/292 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+LI+G K + DKA MV V PD VTFN ++ G C+ KF+ A L
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M E+ C P+ ++NTLI G ++ D + E + G VT IL DGLC
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A ELV + S G P Y L++ LC A E+++ L G +P V+
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +++GL + + +A ++E MLK G P +T+ L+E LC GR +A +
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+K D + Y LV+GY + +R KE + +V+ + +I YN+ MDG
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID---VYNALMDG 296
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 165/355 (46%), Gaps = 37/355 (10%)
Query: 157 FHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ KA + LLA A R + RPS YN LI+G K + D+A D
Sbjct: 48 FNSIMDGLCKAGKFERAHSLLAVMAER---NCRPSCCTYNTLISGLCKQQNVDRAKTLVD 104
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
V PDVVT++IL G C+ + D A L +EM GC PN+V++NTLI G
Sbjct: 105 EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKAS 164
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K ++ + ++ G VT I+VDGLC EGR+ KA ++V +RG P Y
Sbjct: 165 KTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT 224
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA---------- 384
L+E LC G A + E+ K +A +L+ G + + EA
Sbjct: 225 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 284
Query: 385 ------SGLMEKMLKEGIL----------------PDSVTFNCLLEDLCDVGRTVDADRL 422
+ LM+ KEG L P+ T+N +++ LC G+ +A
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPF 344
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ G PD ++Y+I++ G + ++ KE ++++M+ G PD TYN+ M
Sbjct: 345 LESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 135/267 (50%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+V PDV T+NILI G C+ K D A + EM ++G P+ V+FN+++ G KF+
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ M E C S T L+ GLC + V +A LV +F G +P Y L +
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A E+V E+ G P+++ TLI+GL + K +A L+E ++ G +PD
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+ +++ LC GR A ++ +G P +TY L+ G R R E ++
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKS 486
EM+ + D Y S ++G + ++
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRT 271
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 52/400 (13%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ L + R E H + + + C S VN + K++R
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS----------LVNGYCKSSRT 271
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ + +R G P + +YN L++G+ K D+ ++ M P++ T+NI
Sbjct: 272 KEAQKVVDGIR----GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 327
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
++ G C++ K D A M GC P+VVS+N +I G F K E + +MI+ G
Sbjct: 328 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 387
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VT L+ C E R A ++ + + GV P + Y L+ L G A
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRL-RKGV--EASGLMEKMLKEGILPDSVTFNCLL 407
E++ E+ + G + S ACTT + RL ++G +A LM+ M G+ ++VT+N +
Sbjct: 448 ELMHEMLRNGCVVS--ACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505
Query: 408 EDLCDVGRTVDADRL---------------------------------RLLASTKGLDPD 434
+ LC GR +A L R + + KGL
Sbjct: 506 DRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 565
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
T+++L+ +T+ R E L+ M+ G P + TYN
Sbjct: 566 SHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYN 605
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 165/328 (50%), Gaps = 6/328 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ ++ K ++++ E+M P V YN++I+G K + +A D
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHS-AGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M++ + PD VT+N L++ FC+ ++FD A+G+ + M + G +P+ V++NTLI G
Sbjct: 382 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441
Query: 275 KFDEGVNMAYEMIELGCEFSSVTC-EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + +EM+ GC S+ T ++D LC EG + +A L+ + GV Y
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++LC EG A ++ E+ L ++ TT+I GL + + AS L +M+
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 558
Query: 394 -EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ S TFN L++ R +A L L +G P +TY+++++ + ++
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVD 618
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L +EM G + +Y + GL
Sbjct: 619 KAWELFDEMAVRGIVASSVSYTVLIYGL 646
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 116/230 (50%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E+ P+V ++N LI G K D+ M +EM++ G +VT ++DGLC G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+A L+ + R P Y L+ LC + N A +VDE G +P V+ +
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L +GL + + EA L+++M G P+ VT+N L++ LC +T A L + G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY I+V G +E R + +V ML G P + TY + M+GL
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 22/289 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVL-NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVK 166
D T+ ++ RF + +L N I A P D + ++ ++ +
Sbjct: 391 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP---DNV--------TYNTLISGLSQ 439
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ D A+E M +++ VS YN +I+ K +AL D M V+
Sbjct: 440 TNRLGD---AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+ VT+NI I C+ + D A L EM + VS+ T+I G + D +A
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLA 553
Query: 284 YEMIEL-GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM+ + G +S T +L+D R+ +A L+ +RG P Y ++ LC
Sbjct: 554 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
A E+ DE+ +G + S ++ T LI GL +G EA ++E+M
Sbjct: 614 LDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+LI+ F K + D+AL + MV+ P V+T+N++I+ C+ K D A LF EM
Sbjct: 569 FNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 628
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G + VS+ LI G G+ + E + + EM CE + C L L +GR
Sbjct: 629 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGE 688
Query: 313 KACELV 318
+A EL+
Sbjct: 689 EAAELL 694
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R+++ M L R VS Y +I G K + D+A M
Sbjct: 501 YNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVS-YTTVIIGLCKAEQLDRASKLAREM 556
Query: 217 VRDRVKPDVVT---FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
V VK +T FN+LI F + K+ D AL L M ++GC+P+V+++N +I
Sbjct: 557 VA--VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKL 614
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K D+ + EM G SSV+ +L+ GLC +GR +A +++ + + D
Sbjct: 615 DKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKC 674
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKK 359
L L G+G A E++ + K
Sbjct: 675 RKLYLALRGQGRGEEAAELLRRMTTK 700
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 185/388 (47%), Gaps = 18/388 (4%)
Query: 109 HTTFLFIVRSLASSYRFSELHSVLNFISANPC---PCSND-GIFSCPEMER--------- 155
H +F F V SL + F LN + C C +FS +M+R
Sbjct: 92 HPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFS--QMKRNYDCVVPDC 149
Query: 156 -IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN F KA R+ + + FEAM+K D RP++ Y+VLI+ + K E + LG +
Sbjct: 150 VTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLE 209
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ +K DV ++ LIS FC + LF EM + +PNVV+++ L++G
Sbjct: 210 EMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTG 269
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ E M +M G V +L DGLC GR A +++ ++G P Y
Sbjct: 270 RWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYN 329
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V LC E A VV+ + KKG P + TL++GL K EA L + +L E
Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE 389
Query: 395 G--ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ PD T N L++ LC GR DA R+ GL + +TY+ L+ GY +
Sbjct: 390 KFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLI 449
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E L ++ GF P+ TY+ ++GL
Sbjct: 450 EALKLWKYAVESGFSPNSMTYSVMINGL 477
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 178/339 (52%), Gaps = 4/339 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ + F ++ + + + F M++ D P YN L+NGF K + +A ++
Sbjct: 115 LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEA 174
Query: 216 MVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +P++VT+++LI +C++ + LGL EM +G +V +++LI F GE
Sbjct: 175 MKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ G + EM+ + VT L+ GL GR +A E++ D + RGV P Y
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L + LC G AG A++V+D + +KG P + ++ GL + + +A G++E M+K+
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTK-GLDPDGMTYHILVSGYTRENRRK 452
G PD+VT+N LL+ LC G+ +A D +LL S K + PD T + L+ G +E R
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ + + M++ G ++ TYN ++G ARK + +
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 164/337 (48%), Gaps = 40/337 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP------------------------ 223
PS + LI+ K R++D + Y +MV V P
Sbjct: 40 PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99
Query: 224 -----------DVVTFNILISGFCRNKKFDLALGLFREM-REKGCN-PNVVSFNTLIRGF 270
+V N+++ GFCR+ + D A+ LF +M R C P+ V++NTL+ GF
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159
Query: 271 FGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
++ E + +E ++ G C + VT +L+D C G V + L+ + R G+
Sbjct: 160 CKAKRLAEA-RVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
F Y L+ CGEG+ E+ DE+ ++ P+V+ + L++GL R + EAS ++
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+ M G+ PD V + L + LC GR DA ++ L KG +P +TY+++V+G +E
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+R + +V M+ +G PD TYN+ + GL A K
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGK 375
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 168/360 (46%), Gaps = 19/360 (5%)
Query: 140 CPCSN----DGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEAM--RKLID 185
C C + +G+ EMER ++ ++AF + G F+ M RK+
Sbjct: 194 CYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKV-- 251
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P+V Y+ L+ G + + +A M V+PDVV + +L G C+N + A+
Sbjct: 252 -SPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAI 310
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ M +KG P +++N ++ G E + D+ + M++ G + +VT L+ GL
Sbjct: 311 KVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGL 370
Query: 306 CNEGRVLKACEL--VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
C G++ +A +L ++ + V P F L++ LC EG A + + + G
Sbjct: 371 CGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQG 430
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+++ LIEG RK +EA L + ++ G P+S+T++ ++ LC + A L
Sbjct: 431 NIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLF 490
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G+ P + Y+ L++ RE+ ++ +L EM + D+ ++N +DG A
Sbjct: 491 CKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKA 550
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 3/315 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ VN K +RM+D E M K +P YN L+ G + +A+ + +
Sbjct: 328 YNVVVNGLCKEDRMDDAFGVVEMMVKK-GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Query: 217 VRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ ++ VKPDV T N LI G C+ + A + M E G N+V++N LI G+ R
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E + + +E G +S+T ++++GLC + A L G+ P DY
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC E + A + E+ + V++ +I+G + A L+ +M
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
++PD+VTF+ L+ +G +A L + G P + + L+ GY + ++
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKI 626
Query: 455 ENLVNEMLDEGFIPD 469
+L+++M D+ + D
Sbjct: 627 ISLLHQMADKDVVLD 641
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 138/297 (46%), Gaps = 2/297 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP V Y VL +G K A+ D MV+ +P +T+N++++G C+ + D A G
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFG 346
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI--ELGCEFSSVTCEILVDG 304
+ M +KG P+ V++NTL++G G K E +++ ++ + + TC L+ G
Sbjct: 347 VVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQG 406
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC EGRV A + G+ Y L+E AL++ + G P+
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ + +I GL +++ A GL KM GI P + +N L+ LC A L
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQ 526
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ D ++++I++ G + K + L++EM +PD T++ ++ S
Sbjct: 527 EMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFS 583
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++ L + + E + + + D +F+C + + K
Sbjct: 359 DAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPD-VFTCNNL-------IQGLCKE 410
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R++D +M ++ + ++ YN LI G++ R+ +AL + V P+ +T
Sbjct: 411 GRVHDAARIHSSMVEM-GLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMT 469
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++++I+G C+ + +A GLF +M++ G P V+ +N L+ E ++ ++ EM
Sbjct: 470 YSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMR 529
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ V+ I++DG G V A EL+ + ++P + L+ + G
Sbjct: 530 NVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLD 589
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ + +++ G++P V+ +L++G + + L+ +M + ++ DS + +L
Sbjct: 590 EAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649
Query: 408 EDLCDVGRTVDADRL 422
LC + R +D +++
Sbjct: 650 ACLCHMSRNLDVEKI 664
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F+ MR ++ V +N++I+G +K + A M + PD VTF+ILI+ F
Sbjct: 525 FQEMRN-VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFS 583
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ D A+GL+ +M G P VV F++L++G+ + + ++ +++ ++M + S
Sbjct: 584 KLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSK 643
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRR 324
++ LC+ R L +++ FS++
Sbjct: 644 LTSTILACLCHMSRNLDVEKILPKFSQQ 671
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 169/327 (51%), Gaps = 3/327 (0%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ F K N + F+ M K G P + +N LI+ K ++ + ++++
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLK--QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V P++ TFNI I G CR D A L + +G P+V+S+NTLI GF K E
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++M+ G E + T +++G C G + A +++ D +G +P +F Y L+
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC +G+ A+ V E +KG S+I TL++GL + ++A LM+ M++ G P
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N ++ LC +G DA+ + A KG PD T++ L+ GY ++ + ++
Sbjct: 425 DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL 484
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ML G PD+ TYN+ ++GL ARK
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARK 511
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 178/387 (45%), Gaps = 10/387 (2%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+F T D F+H T+ ++ L +F + VL + N +E
Sbjct: 26 MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN---------VDSKMLE 76
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + ++ + + FE M D PSV YN ++N V+ F +A Y
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM + PDV T I + FC + AL L M +GC N VS+ +I GF+ E
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E ++ EM++ G +T L+ LC +G V ++ +L +RGV P F +
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC +G A +++ + +G P VI+ TLI G + K VEA + KM+
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ T+N ++ C G +AD++ A KG PD TY L++G +
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ E +++GF + YN+ + GLS
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLS 402
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV----KPDVVTFNILISGFCRNKKFD 242
P+ YN +INGF K A D+++RD + PD T++ LI+G C + +
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNA----DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ +F E EKG +++ +NTL++G + + + + +M+E GC T ++V
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC G + A ++ D +G +P F + L++ C + N A+E++D + G
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P VI TL+ GL + RK + ML++G P+ +T+N L+E C + +A L
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553
Query: 423 RLLASTKGLDPDGMTYHILVSG 444
T+GL PD +T L+ G
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICG 575
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 144/324 (44%), Gaps = 7/324 (2%)
Query: 153 MERIFHFAV---NAFVKA-NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREF 206
ME+ F ++ N VK ++ L A + M+ +++ P + YN+++NG K
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
A G + + PD+ TFN LI G+C+ + D A+ + M G P+V+++NTL
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ G RK D V+ M+E GC + +T IL++ C + +V +A EL + RG+
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC-TTLIEGLRRLRKGVEAS 385
P L+ LC G A E+ + K+ A +I A
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L KM PD+ T+ +++ C G A L +KGL P T +++
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Query: 446 TRENRRKEGENLVNEMLDEGFIPD 469
+R E ++N M+ G +P+
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPE 706
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++D G+L + I P + +N LI+G+ K R DKA+ D
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCI---PDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDV+T+N L++G C+ +K D + F+ M EKGC PN++++N LI F +R
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-------------- 320
K E + + EM G VT L+ GLC+ G + KA EL +
Sbjct: 546 KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIF 605
Query: 321 -------------------FSRRG---VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
F + G P ++ Y +++ C GN +A + E
Sbjct: 606 NIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENIS 665
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
KG +PS C ++ L + EA ++ M++ GI+P+ V
Sbjct: 666 KGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 6/328 (1%)
Query: 154 ERIFHFAVNAFVKANRMN--DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
E ++ +N F KA M D +L + I P Y+ LING + ++A+
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFI---PDEFTYSSLINGLCNDGDMNRAMA 377
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ + K ++ +N L+ G + AL L ++M E GC+P++ ++N ++ G
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + I GC T L+DG C + + KA E++ G+ P
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ LC ++ + +KG P++I LIE + RK EA L ++M
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL-LASTKGLDPDGMTYHILVSGYTRENR 450
G+ PD VT L+ LC G A L + + ++I+++ + +
Sbjct: 558 KTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLN 617
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMD 478
E L ++M PD TY +D
Sbjct: 618 VSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 35/287 (12%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR-----GFFGE------RKFDEG 279
++ + R K A+ +F M C P+V S+N ++ G+F + R D G
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 280 V------------------------NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+ + M GCEF++V+ ++ G E ++A
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L + ++G+ P + L+ LC +GN + ++ ++ K+G P++ I+GL
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R EA+ L+E ++ EG+ PD +++N L+ C + V+A+ G++P+
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
TY+ +++G+ + + + ++ + + +GFIPD TY+S ++GL N
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 134/283 (47%), Gaps = 4/283 (1%)
Query: 209 ALGFYDRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS--FNT 265
AL ++++ D K + T+ +I + KF+ + EMR K + ++ +
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIG 81
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++R + + K E VN+ M CE S + +++ L G +A ++ + G
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P + + ++ C G AL +++ + +G + ++ +I G + +EA
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++MLK+GI PD +TFN L+ LC G ++++L +G+ P+ T++I + G
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
R+ E L+ ++ EG PD+ +YN+ + G K V
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 202/421 (47%), Gaps = 28/421 (6%)
Query: 74 LLHFLKSKLHHHPQFTHYDFHIFAWASTID-SFRHDH----------TTFLFIVRSLASS 122
LL +KS FTH I A A+ D DH T+ ++ + A +
Sbjct: 12 LLEEMKSAGFAPDAFTHTPI-ITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARA 70
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
+ E +L + CP P + ++ V+A K + + A + ++K
Sbjct: 71 KKLEEAMKLLEEMRERGCP---------PNL-VTYNVLVDALCKLSMVG---AAQDVVKK 117
Query: 183 LIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+I+G P+V +N L++GF K D A MV ++P+VVT++ LI G C+++K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
F A + EM+ G P+ +++ LI G K +E M M GC V
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++ C G++L+A + + + ++ P Y +++ LC G A ++D++ + G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 361 N-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ LP V+ +T+I GL + VEA L+++M K G PD VT+ +++ LC GR +A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L G P+ +TY L+SG + + E E ++ EM + G P+L TYN+ ++G
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 480 L 480
L
Sbjct: 418 L 418
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 162/326 (49%), Gaps = 2/326 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ AF +A ++ + + E MR+ P++ YNVL++ K A +M+
Sbjct: 64 IAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+V+TFN L+ GFC+ D A L M KG PNVV+++ LI G +KF E
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G + T L+ GLC ++ +A +++ + G P Y ++
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG-ILPD 399
C G A + + E+ K+ P V+ T+I+GL +L K EA ++++M + G +LPD
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT++ ++ LC V+A +L G +PD +TY ++ G + R +E E L+
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
M G P++ TY + + GL ARK
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARK 388
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 161/332 (48%), Gaps = 14/332 (4%)
Query: 157 FHFAVNAFVKANRMND-----GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
F+ V+ F K ++D G++ + MR P+V Y+ LI+G K ++F +A
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMR------PNVVTYSALIDGLCKSQKFLEAKE 183
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M V PD T++ LI G C+ K + A + R M GC P+VV ++++I F
Sbjct: 184 VLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 243
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKD 330
K E EM + VT ++DGLC G++ +A ++ G VLP
Sbjct: 244 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV 303
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y ++ LC A +++D + K G P V+ TT+I+GL + + EA L++
Sbjct: 304 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G P+ VT+ L+ LC + +A+R+ G P+ +TY+ +V+G R
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 423
Query: 451 RKEGENLVNEMLD--EGFIPDLATYNSYMDGL 480
KE + LV M D PD ATY + ++ L
Sbjct: 424 IKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 3/276 (1%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ AL + M PD T +I+ D A+ R M GC+PNVV++
Sbjct: 5 DLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYT 61
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F +K +E + + EM E GC + VT +LVD LC V A ++V
Sbjct: 62 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 121
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + LV+ C GN A +++ + KG P+V+ + LI+GL + +K +EA
Sbjct: 122 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++E+M G+ PD+ T++ L+ LC + +A+++ + G PD + Y ++
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHA 241
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + + E + + EM + PD+ TYN+ +DGL
Sbjct: 242 FCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 165/324 (50%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + K+ ++ L E M P V YN ++ + +A+ DR
Sbjct: 180 YNVLIGGYCKSGEIDKALQVLERMSVA----PDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI C + A+ L EMR+KGC P+VV++N LI G E +
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + M GC+ + +T I++ +C+ GR + A L+ D R+G P + L
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC + G A++V++++ K G +P+ ++ L+ G + +K A +E M+ G
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N LL LC G+ A + S+KG P +TY+ ++ G T+ + +
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM +G PD+ TY++ + GL
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGL 499
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 191/377 (50%), Gaps = 15/377 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+RSL S + E VL+ C P++ + + A
Sbjct: 208 DVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECY---------PDV-ITYTILIEATCND 257
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + + MRK +P V YNVLING K D+A+ F + M +P+V+T
Sbjct: 258 SGVGQAMKLLDEMRKK-GCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NI++ C ++ A L +M KGC+P+VV+FN LI +R +++ +M
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ GC +S++ L+ G C E ++ +A E + RG P Y L+ LC +G A
Sbjct: 377 KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++++L KG P +I T+I+GL ++ K A+ L+E+M ++G+ PD +T++ LL
Sbjct: 437 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496
Query: 408 EDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L G+ +A +++ +GL P +TY+ ++ G + + + + M+++G
Sbjct: 497 RGLGCEGKVDEA--IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 554
Query: 466 FIPDLATYNSYMDGLSN 482
P ATY ++G+++
Sbjct: 555 CKPTKATYTILIEGIAD 571
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 155/299 (51%), Gaps = 3/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YNVLI G+ K E DKAL +RM V PDVVT+N ++ C + K A+ +
Sbjct: 175 PDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ C P+V+++ LI + + + + EM + GC+ VT +L++G+C
Sbjct: 232 LDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGR+ +A + + + G P + ++ +C G A ++ ++ +KG PSV+
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI L R R A ++EKM K G +P+S+++N LL C + A +
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++G PD +TY+ L++ ++ + ++N++ +G P L TYN+ +DGL+ K+
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 470
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI +A+ D M + KPDVVT+N+LI+G C+ + D A+
Sbjct: 242 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 301
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC PNV++ N ++R ++ + + +M+ GC S VT IL++ LC
Sbjct: 302 LNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCR 361
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + +A +++ + G +P Y L+ C E A+E ++ + +G P ++
Sbjct: 362 KRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L + K A ++ ++ +G P +T+N +++ L VG+T A L
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KGL PD +TY L+ G E + E + ++M P TYN+ M GL A+++
Sbjct: 482 RKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 541
Query: 488 R 488
R
Sbjct: 542 R 542
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 3/295 (1%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N+ + V+ E ++ L F +RM+ PDV+ LI GFCR+ K A + +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P+V+++N LI G+ + D+ + + M VT ++ LC+ G++ +
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A E++ +R P Y L+E C + G A++++DE+ KKG P V+ LI
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G+ + + EA + M G P+ +T N +L +C GR +DA+RL KG P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+T++IL++ R+ +++ +M G +P+ +YN + G +K R
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR 402
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 228/491 (46%), Gaps = 35/491 (7%)
Query: 15 NKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSL 74
N++ + ++P+ + TL SV+ TH L F THLL + +
Sbjct: 18 NRTNSHSNSRTLPILNETTNINRTLSSVS----KPQTHTLDFKDTHLLKSLSRSCKAGNF 73
Query: 75 ---LHFLKSKLH--HHPQFTHYD--FHIFAWASTIDSF--------RHDH---TTFLFIV 116
L+FL+ ++ H P H + TID H H + I+
Sbjct: 74 NESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAII 133
Query: 117 RSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLA 176
+ R + VL+ + N G FS P++ ++ + + + M D L
Sbjct: 134 TGFCRANRIDSAYQVLDRMK-------NKG-FS-PDI-VTYNILIGSLC-SRGMLDSALE 182
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F+ + +P+V Y +LI + D+A+ D M+ ++PD+ T+N +I G C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
R D A + + KG P+V+++N L+RG + K++ G + +M+ GCE + V
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T +L+ +C +G+V + L+ D ++G+ P + Y L+ LC EG +A+EV+D +
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
G +P ++ T++ L + ++ EA + EK+ + G P++ ++N + L G
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG-ENLVN-EMLDEGFIPDLATYN 474
V A + L KG+DPDG+TY+ L+S R+ E E LV+ EM P + +YN
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 482
Query: 475 SYMDGLSNARK 485
+ GL +
Sbjct: 483 IVLLGLCKVSR 493
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 146/303 (48%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
G P + YN +I GF + D A DRM PD+VT+NILI C D AL
Sbjct: 122 GHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSAL 181
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
++ ++ C P VV++ LI + DE + + EM+E+ + T ++ G+
Sbjct: 182 EFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGM 241
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C EG V +A +++ S +G P Y L+ L +G E++ ++ +G +V
Sbjct: 242 CREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANV 301
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ + LI + R K E GL++ M K+G+ PD ++ L+ LC GR A + +
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDV 361
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G PD + Y+ +++ ++ R E ++ ++ + G P+ ++YNS L +
Sbjct: 362 MISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGH 421
Query: 486 SVR 488
VR
Sbjct: 422 KVR 424
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + K R ++ L FE + + + P+ S YN + + +ALG M
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGE-VGCSPNASSYNSMFSALWSTGHKVRALGMILEM 432
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLF--REMREKGCNPNVVSFNTLIRGFFGER 274
+ V PD +T+N LIS CR+ D A+ L EM C P+VVS+N ++ G
Sbjct: 433 LDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVS 492
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ + + + M++ GC + T L++G+
Sbjct: 493 RVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 190/375 (50%), Gaps = 12/375 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA + +RHD + +L ++ L+ + +L ++ I CPE
Sbjct: 233 FYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRR-------IQLCPEA-- 283
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F F + ++ +A R+ D + M+K P++SI N I+ V E KAL F +R
Sbjct: 284 -FGFVMVSYSRAGRLRDAMKVLTLMQK-AGVEPNLSICNTAIHILVMGNELKKALRFAER 341
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + P+VVT+N LI G+C + D A+ L +M KGC+P+ VS+ T++ +++
Sbjct: 342 MVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKR 401
Query: 276 FDEGVNMAYEM-IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + +M + VT L+ L G +A E++ + + +Y
Sbjct: 402 LNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYS 461
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V C EG A E+V E++ KG P V+ T++++G R+ K +A +M++M K
Sbjct: 462 AIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH 521
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
P++VT+ L LC G++++A ++ ++ + P+ +TY ++V G RE + E
Sbjct: 522 HCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEA 581
Query: 455 ENLVNEMLDEGFIPD 469
++V EM+ +GF P+
Sbjct: 582 CDVVREMIGKGFFPN 596
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN LI K D+AL + R K D V ++ ++ +C+ K A L
Sbjct: 420 PDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKEL 479
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM KGC+P+VV++ +++ GF K D+ M +M + C+ ++VT ++GLC
Sbjct: 480 VSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCR 539
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ L+A +++ P Y +V L EG A +VV E+ KG P+ +
Sbjct: 540 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 599
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ L R K EA+ L+++ + +G + V F ++ C A L
Sbjct: 600 INLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
PD +TY L+ + +R +E L +ML +G +P TY S
Sbjct: 660 LCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRS 707
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 3/259 (1%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V+A+ K ++ L E K D P V Y +++GF + + D+A +M +
Sbjct: 464 VHAYCKEGKIQKAKELVSEMFSKGCD--PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH 521
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
KP+ VT+ ++G CRN K A + E+ PN ++++ ++ G E K +E
Sbjct: 522 HCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEA 581
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ EMI G + V +LV LC +G+ +A +L+ + +G ++ ++
Sbjct: 582 CDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHG 641
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C + + AL ++D+++ P + T LI+ L + + EA+ L KML++G++P
Sbjct: 642 FCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPS 701
Query: 400 SVTFNCLLEDLCDVGRTVD 418
VT+ ++ C GR D
Sbjct: 702 PVTYRSVIHQYCRKGRVED 720
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 139/317 (43%), Gaps = 1/317 (0%)
Query: 172 DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+ L F +L R S+Y V++ K + A M R R++ F +
Sbjct: 228 NALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFV 287
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
+ + R + A+ + M++ G PN+ NT I + + + A M+ +G
Sbjct: 288 MVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGI 347
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT L+ G CN +V +A EL+ +G P Y+ ++ LC + E
Sbjct: 348 APNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRE 407
Query: 352 VVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ ++ L P + +LI+ L + G EA ++++ K D V ++ ++
Sbjct: 408 LIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAY 467
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G+ A L +KG DPD +TY ++ G+ R + + + ++ +M P+
Sbjct: 468 CKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNA 527
Query: 471 ATYNSYMDGLSNARKSV 487
TY ++++GL KS+
Sbjct: 528 VTYTTFLNGLCRNGKSL 544
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+V+++G + + ++A M+ P+ V N+L+ CR+ K A L
Sbjct: 560 PNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQL 619
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+E KGC NVV+F T+I GF + + +++ +M +VT L+D L
Sbjct: 620 LKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAK 679
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ +A EL + R+G++P Y ++ + C +G L+++ ++ K + A
Sbjct: 680 TDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQT--A 737
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IE L + EA+ L+ ++L+ D+ T + L+E +VG + A ++
Sbjct: 738 YNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMF 797
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ L PD + E + +E + LV ++ G +
Sbjct: 798 NRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHV 837
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 3/311 (0%)
Query: 173 GLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
G +A R+L+ P YN LI G AL D M+R R PDVVT+
Sbjct: 12 GAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 71
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
IL+ C+ + A+ L EMR+KGC P++V++N ++ G E + D+ + +
Sbjct: 72 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 131
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GCE ++V+ I++ GLC R A EL+ + ++G P + L+ LC +G A
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
LEV++++ K G P+ ++ L+ + +K +A ++ M+ G PD V++N LL
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G A L KG P ++Y+ ++ G T+ + KE L+NEM+ +G PD
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311
Query: 470 LATYNSYMDGL 480
+ TY++ GL
Sbjct: 312 IITYSTIAAGL 322
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 150/299 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +L+ K + +A+ D M PD+VT+N++++G C+ + D A+
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + GC PN VS+N +++G ++++ + EM + GC + VT +L+ LC
Sbjct: 125 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 184
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V A E++ + G P Y L+ C + A+ +D + +G P +++
Sbjct: 185 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 244
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L R + A L+ ++ +G P +++N +++ L G+T +A L
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+KGL PD +TY + +G RE+R ++ ++ D G P+ YN+ + GL R++
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 363
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+AM+ L + R P + YNV++NG + D A+ F + +P+ V++NI++
Sbjct: 85 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 144
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C ++++ A L EM +KGC PNVV+FN LI + + + + ++ + GC
Sbjct: 145 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 204
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+S++ L+ C + ++ KA + RG P Y L+ LC G +A+E+
Sbjct: 205 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 264
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ +L KG P +I+ T+I+GL + K EA L+ +M+ +G+ PD +T++ + LC
Sbjct: 265 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 324
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R DA R G+ P+ + Y+ ++ G + +L M+ G +P+ +T
Sbjct: 325 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 384
Query: 473 YNSYMDGLS 481
Y ++GL+
Sbjct: 385 YTILIEGLA 393
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 11/310 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN + R++D A E ++ L P+ YN+++ G ++ A
Sbjct: 105 YNVVVNGICQEGRVDD---AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 161
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VVTFN+LIS CR + AL + ++ + GC PN +S+N L+ F ++
Sbjct: 162 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 221
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 222 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 281
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
+++ L G ALE+++E+ KG P +I +T+ GL R+ + A G ++ M
Sbjct: 282 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
GI P++V +N ++ LC T A L G P+ TY IL+ G E
Sbjct: 342 ---GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398
Query: 452 KEGENLVNEM 461
KE +L++E+
Sbjct: 399 KEARDLLDEL 408
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 9/297 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREM 251
YN ++ G+ + D A R+V + V+PD T+N LI G C + AL + EM
Sbjct: 3 YNAMVAGYCGAGQLDAA----RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ C P+VV++ L+ + + + + EM + GC VT ++V+G+C EGRV
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A E + + G P Y +++ LC A E++ E+ +KG P+V+ L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 372 IEGLRRLRKGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
I L RKG+ L +E++ K G P+S+++N LL C + A L ++
Sbjct: 179 ISFL--CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD ++Y+ L++ R L++++ D+G P L +YN+ +DGL+ A K+
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E + +L D P + YN +I+G K + +AL + MV ++PD++T++ +
Sbjct: 260 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 319
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G CR + + A+ F ++++ G PN V +N +I G R+ +++ MI GC
Sbjct: 320 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 379
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+ T IL++GL EG + +A +L+ + R
Sbjct: 380 PNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 222/496 (44%), Gaps = 36/496 (7%)
Query: 8 LPPILIHNKSPPPPPAPSIPLPSRP--ETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPT 65
L P L + K+P P + P+ +TP ++ L H + L +K
Sbjct: 21 LDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTIS----QLIAKQHWSKLKTIVK------- 69
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ PSSLL L + Y F W H+ F ++ LA++ +
Sbjct: 70 --ETNPSSLLQHLFNSEAQPDLILCY----FKWTQKEFGAIHNVEQFCRLLHLLANAKNY 123
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEM--------ERIFHFAVNAFVKANRMNDGLLAF 177
+++ ++L+ + N SN IF + I V A+VK M+ LA
Sbjct: 124 NKIRALLDSFAKNA-HYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMD---LAL 179
Query: 178 EAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
E + D R S N ++ VK Y M+R R+ +VVTF+++I+G
Sbjct: 180 EGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGL 239
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ KF A + +M+ G +P+V+++NT+I G+ K + + EM+ +
Sbjct: 240 CKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNE 299
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
+T IL+DG C + V A ++ + R+G+ P Y L+ LC G AL + D+
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ G P+V+ LI G + + EA +++ + K G+ P+ +TFN L++ GR
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
DA LR + G+ P+ TY+ L+ G+ RE KE L EM G DL TYN
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 476 YMDGL---SNARKSVR 488
+D L RK+VR
Sbjct: 480 LVDALCKKGETRKAVR 495
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 158/329 (48%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N K + E M K PSV YN +I+G+ K + KA M
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V R+ P+ +TFNILI GFCR++ A +F EM+ +G PNVV++N+LI G K
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + + +M +G + + VT L++G C + + +A E++ D +RG+ P + L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G A + + G P+V LI G R EA L ++M G+
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VT+N L++ LC G T A RL GL+P +TY+ L+ GY RE N
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALN 530
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M +G ++ TYN + G N K
Sbjct: 531 VRTLMEKKGRRANIVTYNVLIKGFCNKGK 559
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E F+ ++ F + + FE M++ G +P+V YN LING + D+ALG
Sbjct: 299 EITFNILIDGFCRDENVTAAKKVFEEMQR--QGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D+M +KP+VVT+N LI+GFC+ K A + ++ ++G PNV++FNTLI +
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D+ + M++ G + T L+ G C EG V +A +L + G+
Sbjct: 417 AGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVT 476
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y LV+ LC +G A+ ++DE+++ G PS + LI+G R A + M
Sbjct: 477 YNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLME 536
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+G + VT+N L++ C+ G+ +A+RL KGL P+ TY I
Sbjct: 537 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI------------ 584
Query: 453 EGENLVNEMLDEGFIPDL 470
L +EM+++GFIPD+
Sbjct: 585 ----LRDEMMEKGFIPDI 598
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 122/234 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN LINGF K + +A D + + + P+V+TFN LI + + + D A
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L M + G PNV ++N LI GF E E +A EM G + VT ILVD LC
Sbjct: 426 LRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G KA L+ + G+ P Y L++ EGN+ AL V + KKG +++
Sbjct: 486 KKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIV 545
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
LI+G K EA+ L+ +ML++G++P+ T++ L +++ + G D D
Sbjct: 546 TYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDID 599
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + Y +M R +++ D+ +F ILI FC K AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+FNTL+ G E + E +N+ ++M E C + VT L++GLC
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGR+++A L+ G+ P Y +V+ +C G+ AL+++ ++ + + +P+V+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+ L + + +A L +M ++GI PD T+N ++ C GR DA++L
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + PD +TY+ L++ + +E + E E L +EML G IP+ TY+S +DG +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 169/337 (50%), Gaps = 14/337 (4%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D + A + +RK+ + P+V IY+ +I+ K A + M + PD+
Sbjct: 231 KIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N +I GFC + ++ A L +EM E+ +P+VV++N LI F E KF E + E
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G +++T ++DG C + R+ A + + +G P + L++ CG
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+E++ E+ + G + TLI G + A L+++M+ G+ PD VT +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LCD G+ DA + +++ +K G++PD TY+IL+SG E + E
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L EM G +PD TY+S +DGL + T+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 155/300 (51%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + + +LI F C + AL + ++ + + PDVVTFN L+ G C + AL
Sbjct: 111 RCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALN 170
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M E C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 171 LFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230
Query: 307 NEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G + A +L+ ++P Y +++ LC +G A + E+ +KG P +
Sbjct: 231 KIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++I G + +A L+++ML+ I PD VT+N L+ G+ +A+ L
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ P+ +TY ++ G+ ++NR E++ M +G P+L T+N+ +DG A++
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 51/372 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + R +D + M RK+ P V YN LIN FVK +F +A YD
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKI---SPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T++ +I GFC+ + D A +F M KGC+PN+++FNTLI G+ G +
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409
Query: 275 KFDEGVNMAYEMIELGCEFSS-----------------------------------VTCE 299
+ D+G+ + +EM E G + VTC+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 300 ILVDGLCNEGRVLKACEL--VIDFSRR---------GVLPKDFDYFGLVEKLCGEGNAGI 348
L+DGLC+ G++ A E+ V+ S++ GV P Y L+ L EG
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E+ +E+ +G +P I +++I+GL + + EA+ + + M + P+ VTF L+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C GR D L +G+ + +TY L+ G+ + ++ EM+ G P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 469 DLATYNSYMDGL 480
D T + + GL
Sbjct: 650 DTITIRNMLTGL 661
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K R +D F M++ G P + YN +I GF + A
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDVVT+N LI+ F + KF A L+ EM +G PN ++++++I GF +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D +M Y M GC + +T L+DG C R+ EL+ + + G++ Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
L+ G+ AL+++ E+ G P ++ C TL++GL +L+ +E +M+K
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 392 LKE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
K+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +++R E + + M + F P++ T+ + ++G A +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 1/291 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + M+R R P VV F L+ R ++ DL + L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
++ SF LI+ F K ++ ++ +LG VT L+ GLC E RV +A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
++ V A L+ KM + I+P+ V ++ +++ LC GR DA L KG+ PD
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ ++ G+ R + E L+ EML+ PD+ TYN+ ++ K
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VK 222
A + ++++I P + + L++G + AL + M + + V+
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+NILISG KF A L+ EM +G P+ ++++++I G + + DE M
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M + VT L++G C GRV EL + RRG++ Y L+
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
GN AL++ E+ G P I ++ GL + A ++EK+
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 194/421 (46%), Gaps = 22/421 (5%)
Query: 69 ITPSSLLH-FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
+ P +LLH + L + H + + D+ D T+ +V L+ + R +
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRH---ALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRD 57
Query: 128 LHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
VL +SA P + V + +R++D E M L G
Sbjct: 58 AVQVLQEMVSARHVPDNT-----------TLTVVVQSLCLGDRVDDARELVEEM--LHRG 104
Query: 187 RPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
+ +I Y+ L++G KC D+A+ + M P VVT+N +I+GFCR ++ D A
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAH 164
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
G +M +GC+P+++++ LI GF R G+ + E+ G VT ++DGL
Sbjct: 165 GFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGL 224
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR+ A ++ F P Y L+ C G+ A+ ++ ++ P V
Sbjct: 225 CKAGRLRDAVDI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDV 281
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ TTL+ ++ + +A L ++M+ + PD VTF L++ LC GR DA L
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 341
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +G P TY+ +V GY + N+ ++ E LV + GF+P+ TYN + G A +
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 401
Query: 486 S 486
+
Sbjct: 402 T 402
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 6/307 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ KA R+ D + FE M P+ YN LI G+ + + D+A+ +M
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEM----SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V D+ PDVVT+ L+S FC+ + D A LF++M +P+VV+F +L+ G GE +
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + + E+ GC + T +VDG C +V KA ELV DF RG +P Y L
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392
Query: 337 VEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTLI-EGLRRLRKGVEASGLMEKMLKE 394
V C G AL+ +D+L +G P+ +A +I + L R + +A E+M++
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 452
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G +P + TF ++ LC + A L G P T +VS Y R ++
Sbjct: 453 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512
Query: 455 ENLVNEM 461
+ L +E+
Sbjct: 513 DELASEL 519
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 184/423 (43%), Gaps = 57/423 (13%)
Query: 104 SFRH--DHTTFLFIVRSLASSYRFSELHSVLN-----FISANPCPCSNDGIFSCPEMERI 156
S RH D+TT +V+SL R + ++ ++AN
Sbjct: 67 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI---------------T 111
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+ K R+++ + E M + P+V YN +I GF + R D+A GF ++M
Sbjct: 112 YSALVDGLCKCERLDEAVALVETMAER-GCAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--------------------- 255
V + PD++T+ LI GFC+++ L L E+ +G
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230
Query: 256 -----------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
C P +++N+LI G+ DE + + +M++ C VT L+
Sbjct: 231 RDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA 290
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GR+ A EL + P + LV+ LCGEG ALE+++E+ ++G P+
Sbjct: 291 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLR 423
+ +++G + + +A L+ G +P++VT+N L+ C GRT A L
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 410
Query: 424 LLASTKGLDPDGMT-YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
L S G P + Y I++ R+ R + EM+ G++P AT+ + + L
Sbjct: 411 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470
Query: 483 ARK 485
A +
Sbjct: 471 AHQ 473
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 151/293 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN LI G D AL D M+R PDVVT+ IL+ C+ + A+ L
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKL 209
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMR+KGC P++V++N ++ G E + D+ + + GCE ++V+ I++ GLC
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R A +L+ + SR+G P + L+ LC G A+E++D++ K G P+ ++
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ + +K A +E M+ G PD V++N LL LC G A L
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG P ++Y+ ++ G T+ + +E L+NEM+ +G PD+ TY++ GL
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +L+ K + +A+ D M PD+VT+N++++G C+ + D A+
Sbjct: 185 PDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEF 244
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + GC PN VS+N +++G ++++ + EM G + VT +L+ LC
Sbjct: 245 LKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCR 304
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A E++ + G P Y ++ C + A+ V+ + G P +++
Sbjct: 305 RGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVS 364
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L R + A L+ ++ +G P +++N +++ L G+T +A L
Sbjct: 365 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMV 424
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
TKGL PD +TY + SG RE R +E ++ D G P+ YN+ + GL R +
Sbjct: 425 TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRAT 483
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 5/313 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN + R++D A E ++ L P+ YN+++ G ++ A
Sbjct: 225 YNVVVNGICQEGRVDD---AMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMA 281
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R P+VVTFN+LIS CR + A+ + ++ + GC PN +S+N ++ F ++
Sbjct: 282 EMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQK 341
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 342 KMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 401
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ L G ALE+++E+ KG P +I +T+ GL R + EA K+
Sbjct: 402 TVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDM 461
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI P++V +N +L LC T A L + G P+ TY IL+ G E KE
Sbjct: 462 GIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEA 521
Query: 455 ENLVNEMLDEGFI 467
++ E+ G +
Sbjct: 522 REMMAELCSRGVV 534
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 149/295 (50%), Gaps = 2/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YNV++NG + D A+ F + +P+ V++NI++ G C ++++ A L
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL 279
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDE-GVNMAYEMIELGCEFSSVTCEILVDGLC 306
EM KG PNVV+FN LI F R E + + ++ + GC +S++ ++ C
Sbjct: 280 MAEMSRKGRPPNVVTFNMLI-SFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFC 338
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ ++ +A V G P Y L+ LC G A+E++ +L KG P +I
Sbjct: 339 KQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLI 398
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ T+I+GL + K EA L+ +M+ +G+ PD +T++ + LC GR +A +
Sbjct: 399 SYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G+ P+ + Y+ ++ G + +L M+ G +P+ +TY ++GL+
Sbjct: 459 QDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLA 513
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 3/233 (1%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C P+V+S+N ++ G+ + D + M E + T L+ GLC GR A
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNAL 172
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
++ D RRG +P Y L+E C A++++DE+ KG P ++ ++ G+
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ + +A ++ + G P++V++N +L+ LC R DA++L S KG P+
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+T+++L+S R + +++++ G P+ +YN + +K R
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + +L D P + YN +I+G K + ++AL + MV ++PD++T++ + S
Sbjct: 381 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISS 440
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G CR + + A+ F ++++ G PN V +N ++ G R +++ M+ GC
Sbjct: 441 GLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMP 500
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ T IL++GL EG V +A E++ + RGV+ K G + L G
Sbjct: 501 NESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLLDG 549
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 383 EASGLMEKMLKEGILPDSVT-FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L+E M G+ P + L++ LC GRT +A R+LAS +PD M+Y+ +
Sbjct: 74 EAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEAR--RVLASC---EPDVMSYNAM 126
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
V+GY + LV M E PD TYN+ + GL
Sbjct: 127 VAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGL 162
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 192/390 (49%), Gaps = 13/390 (3%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
IF S++ TF ++ + A+S F +H VL+ + +
Sbjct: 74 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLT---------- 123
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E IF A KA+ + + F M + + +V +N ++N ++ +F A FY
Sbjct: 124 ETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY 183
Query: 214 DRMVRDRVK---PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ K P+++T+N++I C+ + D A+ FREM K CNP+V +++TL+ G
Sbjct: 184 LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGL 243
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
ER+ DE V + EM GC + VT +L+D L G + +A +LV + +G +P +
Sbjct: 244 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 303
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC +G AL +++++ +P+ + T+I GL + R+ + ++
Sbjct: 304 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 363
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G + ++ L+ L G++ +A RL + KG P+ + Y + G R+ +
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
E E+++ EML +GF+P+ TY+S M G
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 200/428 (46%), Gaps = 50/428 (11%)
Query: 91 YDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
+ F++ + + F+ + T+ I+++L + ++ ++ P N +F+
Sbjct: 180 FKFYLHVFGANSKGFQPNLLTYNLIIKALC---KLGQIDRAVDTFREMPLKNCNPDVFT- 235
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMR----------------------------K 182
+ +N K R+++ + + M+ K
Sbjct: 236 ------YSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289
Query: 183 LIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
L+D P+ YN LI+G + DKAL ++MV + P+ VT+ +I+G
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ ++ + + + M E+G N +++LI G F E K + V + EM E GC+ + V
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+DGLC + + +A +++ + +G LP F Y L++ +G++ A+ V E+
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ +V+ C+ L+ GL + EA + ML EG+ PD V ++ +++ LCDVG +
Sbjct: 470 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVG-S 528
Query: 417 VDADRLRLLASTKGLD----PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
VD L+L + + PD +TY+IL + R++ +L+N MLDEG PD T
Sbjct: 529 VDKG-LKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 587
Query: 473 YNSYMDGL 480
N +++ L
Sbjct: 588 CNIFLETL 595
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 38/253 (15%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N VK R DG+ +M + + + IY+ LI+G K + + A+ + M
Sbjct: 345 INGLVKQRRAEDGVHILMSMEER-GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 403
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KP+VV + I G CR++K D A + +EM KG PN ++++L++GFF + + +
Sbjct: 404 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + V C +L++GLC GR+ +A + G+ P Y +++ L
Sbjct: 464 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 523
Query: 341 CGEG-------------------------------------NAGIALEVVDELWKKGNLP 363
C G N A+++++ + +G P
Sbjct: 524 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 583
Query: 364 SVIACTTLIEGLR 376
+ C +E LR
Sbjct: 584 DSLTCNIFLETLR 596
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 19/325 (5%)
Query: 182 KLIDGRPSVSIYNV-------LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
++ RP Y + LI + REF DRM R+ V+T I I
Sbjct: 74 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKRE---GRVLTETIFILI 130
Query: 235 FCRNKKFDL---ALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI--- 287
F K L A+ F M + C V SFN+++ E F +
Sbjct: 131 FKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 190
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + +T +++ LC G++ +A + + + P F Y L+ LC E
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ ++DE+ +G LP+ + LI+ L + A+ L++ M +G +P+ VT+N L+
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310
Query: 408 EDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
LC G+ A L + S+K + P+ +TY +++G ++ R ++G +++ M + G
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
+ Y+S + GL KS R
Sbjct: 370 KANEYIYSSLISGLFKEGKSENAVR 394
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 164/313 (52%), Gaps = 2/313 (0%)
Query: 175 LAFEAMRKLI-DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LAFE M +L+ DG +PSV Y +LI + ++AL +D +V ++PD+ T+N +I
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ D AL R + +GCNP+VVS+N L+R F + ++++G + +M+ GCE
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE 303
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT IL+ C EGRV +A ++ +G+ P + Y L+ C EG +A+E
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++++ G LP ++ T++ L + A + EK+ + G P +N + L
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G + A + KG+DPD +TY+ L+S R+ E L+ +M F P + +
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVIS 483
Query: 473 YNSYMDGLSNARK 485
+N + G+ A +
Sbjct: 484 FNIVLLGMCKAHR 496
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 4/321 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N +A + N+ L E++ + G +P V + LI GF R KA+ + ++
Sbjct: 69 LNRSCRAGKHNESLYFLESV--VSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME-ILET 125
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PDV ++N +ISGF + + D A +F MR +G +P+VV++N +I K +
Sbjct: 126 YGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELA 185
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ E+++ GC+ S +T IL++ EGR+ +A EL + RG+ P + Y ++
Sbjct: 186 FEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRG 245
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+C EG AL+ V L +G P V++ L+ + + LM+ M+ G P+
Sbjct: 246 ICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPN 305
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT + L+ C GR +A + + KGL PD +Y L+S + +E R +
Sbjct: 306 VVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
+M+ +G +PD+ YN+ + L
Sbjct: 366 KMVSDGCLPDIVNYNTILATL 386
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 196/417 (47%), Gaps = 29/417 (6%)
Query: 83 HHHPQFTHYDFHI--FAWASTIDS------------FRHDHTTFLFIVRSLASSYRFSEL 128
+ P Y+ I F+ A+ IDS F D T+ ++ SL S +
Sbjct: 126 YGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELA 185
Query: 129 HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDG 186
V++ + + C S + + A + R+N+ L F+ + R L
Sbjct: 186 FEVMDELLKDGCKPS----------VITYTILIEATILEGRINEALELFDELVSRGL--- 232
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP + YN +I G K D+AL F + PDVV++NIL+ F +++
Sbjct: 233 RPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGER 292
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L ++M GC PNVV+ + LI F E + E VN+ M E G S + + L+ C
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EGR+ A E + G LP +Y ++ LC G A +AL+V ++L + G P+V
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A T+ L ++A ++ +M+++GI PD +T+N L+ LC G +A L +
Sbjct: 413 AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P ++++I++ G + +R EG L+ M+++G +P+ +Y ++G++ A
Sbjct: 473 EATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYA 529
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++ CR K + +L + KG P+VV LI+GFF R + + + E++E
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETY 126
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ + ++ G ++ A ++ RG P Y ++ LC G +A
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
EV+DEL K G PSVI T LIE + EA L ++++ G+ PD T+N ++ +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 411 CDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G A D +R L S +G +PD ++Y+IL+ + ++R ++GE L+ +M+ G P+
Sbjct: 247 CKEGMEDRALDFVRHL-SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPN 305
Query: 470 LATYN 474
+ T++
Sbjct: 306 VVTHS 310
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 175 LAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + KL + P+V YN + + C KAL M+R + PD +T+N LI
Sbjct: 394 LALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
S CR+ D A+GL +M P V+SFN ++ G + EG+ + M+E GC
Sbjct: 454 SCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCL 513
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + +L++G+ G +A EL R GV+ D
Sbjct: 514 PNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGD 551
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 34/186 (18%)
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGV--- 382
+D L+ + C G +L ++ + KG P V+ CT LI+G R L+K +
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 383 ----------------------------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
A+ + ++M G PD VT+N ++ LC G
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ A + G P +TY IL+ E R E L +E++ G PDL TYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240
Query: 475 SYMDGL 480
+ + G+
Sbjct: 241 AIIRGI 246
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 169/326 (51%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYD 214
H +N F + R++ L F + K+I ++I +N LING K +F +A+ +D
Sbjct: 160 LHMLINCFFQLQRVD---LGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFD 216
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV +PDV T+ +I+G C+ + A GLFR+M E GC P+VV+++T+I +R
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E +++ M G + T L+ GLCN R +A ++ + ++P +
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C EGN A V+ + + G P+V+ ++L+ G + VEA L + M+ +
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD ++N L+ C R +A +L +GL PD ++Y+ L+ G + R +E
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+L ML G +PDL TY+ +DG
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGF 482
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 168/324 (51%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A VK +D +++ +L P ++LIN F + + D ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ ++ +VTFN LI+G C+ KF A+ LF +M +G P+V ++ T+I G +
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +M E GC+ VT ++D LC + RV +A ++ +G+ P F Y L
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC A +++E+ +P+++ + LI + EA G+++ M + G+
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT++ L+ V+A +L + TKG PD +Y+IL++GY + R E +
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L NEM+ +G PD+ +YN+ +DGL
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGL 447
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 3/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N K + + F+ M + G +P V Y +ING K E A G + +
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDM--VARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +PDVVT++ +I C++++ + AL +F M+ KG +PN+ ++N+LI+G +
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ E M EM+ L + VT +L++ C EG V +A ++ + GV P Y
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + A ++ D + KG P V + LI G + ++ EA L +M+ +G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V++N L++ LC +GR +A L T G PD TY IL+ G+ ++ +
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L M P++ YN +D + +R
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSR 521
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y+ +I+ K R ++AL + M + P++ T+N LI G C ++ A
Sbjct: 259 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 318
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ EM PN+V+F+ LI F E E + M E+G E + VT L++G
Sbjct: 319 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 378
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ V++A +L +G P F Y L+ C G A ++ +E+ +G P ++
Sbjct: 379 LQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 438
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI+GL +L + EA L + ML G LPD T++ LL+ C G A RL
Sbjct: 439 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 498
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L P+ + Y+IL+ + KE L +E+ +G P++ Y + ++GL
Sbjct: 499 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGL 552
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 147/279 (52%), Gaps = 1/279 (0%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF-DLALGLFREMREKGCNPNVVS 262
R D AL +++ M+ + +P ++ FN L+S + + + D + L ++M G +P+ +
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ LI FF ++ D G ++ ++I+LG + + VT L++GLC G+ +A EL D
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
RG P Y ++ LC G A + ++ + G P V+ +T+I+ L + R+
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA + M +GI P+ T+N L++ LC+ R +A + + + P+ +T+ +L+
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ + +E E ++ M + G P++ TY+S M+G S
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 378
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 1/331 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K R+N+ L F M K P++ YN LI G + +A + M+
Sbjct: 269 IDSLCKDRRVNEALDIFSYM-KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P++VTF++LI+ FC+ A G+ + M E G PNVV++++L+ G+ + + E
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEAR 387
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI GC+ + IL++G C R+ +A +L + +G+ P Y L++ L
Sbjct: 388 KLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 447
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A ++ + GNLP + + L++G + +A L M + P+
Sbjct: 448 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 507
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V +N L++ +C +A +L +GL P+ Y +++G +E E
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
M ++G P+ +YN + G + R +
Sbjct: 568 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 598
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 11/365 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+ SL R +E + +++ A + IF+ ++ +
Sbjct: 261 DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGI---SPNIFT-------YNSLIQGLCNF 310
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+R + M L + P++ +++LIN F K +A G M V+P+VVT
Sbjct: 311 SRWREASAMLNEMMSL-NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 369
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++ L++G+ + A LF M KGC P+V S+N LI G+ ++ E + EMI
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 429
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G V+ L+DGLC GR+ +A +L + G LP Y L++ C +G
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 489
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + + P+++ LI+ + + R EA L ++ +G+ P+ + ++
Sbjct: 490 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G +A G P+ +Y++++ G+ + L+ EM ++GF+
Sbjct: 550 NGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609
Query: 468 PDLAT 472
D+AT
Sbjct: 610 ADVAT 614
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILPDSVTF---- 403
AL + + + P +I L+ + ++R +A L ++M G+ PD+ T
Sbjct: 105 ALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLI 164
Query: 404 NCLLE-DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
NC + D+G +V A ++L GL +T++ L++G + + + L ++M+
Sbjct: 165 NCFFQLQRVDLGFSVLAKIIKL-----GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 463 DEGFIPDLATYNSYMDGLSNARKSV 487
G+ PD+ TY + ++GL ++V
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETV 244
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 162/298 (54%), Gaps = 6/298 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +YN LI+G+ + + A+ ++RM + P+V T+ LISGFC+++K D A+ L
Sbjct: 210 PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMML 269
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M + G PNVV++ LI+G + + D + M G + TC +L+D LC
Sbjct: 270 FSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCK 329
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A L+ ++G+ + Y L++ LC G A ++ L +G +P
Sbjct: 330 HERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++LI+GL R ++ EA +++ M+++G+ P VT+ ++++L R V AD + +
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV---REVGADGSKKILD 446
Query: 428 ---TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G+ PD TY I V Y E R ++ E+++ M+D G P+L TYN+ + G +N
Sbjct: 447 KMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 3/320 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ ++ + + + FE M ++G P+V Y LI+GF K R+ D+A+ +
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMD--VNGCSPNVRTYTELISGFCKSRKLDRAMMLFS 271
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RMV + P+VVT+ LI G C + + D A L + M G PN + + LI
Sbjct: 272 RMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHE 331
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + +I+ G + + + L+DGLC GR A L+ +G +P Y
Sbjct: 332 RVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYS 391
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + A+ V+D++ +KG PS + T +I+ L R + +++KM+
Sbjct: 392 SLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAA 451
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD T+ + C GR DA+ + L G+ P+ +TY+ L+ GY +
Sbjct: 452 GIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQA 511
Query: 455 ENLVNEMLDEGFIPDLATYN 474
+ M+ G P+ +Y
Sbjct: 512 FSTFKHMVANGCKPNEESYT 531
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++G +A+ + M D PD + ++ G C + A L +
Sbjct: 145 YTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAM 204
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G PNVV +N LI G+ + V++ M GC + T L+ G C ++
Sbjct: 205 AEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLD 264
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L G++P Y L++ C +G A ++ + G +P+ C+ LI
Sbjct: 265 RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + + EA L+ ++++GI + + + L++ LC GR ADRL ++G
Sbjct: 325 DALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD TY L+ G R+ E ++++M+++G P TY +D L
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+NAF+ A + L E+ + R ++ Y LIN + + + ++R
Sbjct: 44 LNAFLMALARHRMLADMESFASRMPAR-NLRTYTTLINAYCLAGDLPASKRHLSSLLRAG 102
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD + + G+CR A LF M +GC ++ L+ G G E +
Sbjct: 103 FAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAM 162
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M GC +V GLC GR +A L+ D G P Y L++
Sbjct: 163 SVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGY 222
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ +A++V + + G P+V T LI G + RK A L +M+ G++P+
Sbjct: 223 CNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNV 282
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L++ C G+ A RL GL P+ T +L+ + R E + L+
Sbjct: 283 VTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGS 342
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
++ +G + Y S +DGL A +
Sbjct: 343 LIQKGIKVNEIVYTSLIDGLCKAGR 367
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 25/340 (7%)
Query: 161 VNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++A K R+ + LL ++K I + + +Y LI+G K F A +V
Sbjct: 324 IDALCKHERVGEAQLLLGSLIQKGI--KVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PD T++ LI G CR K+ A+ + +M EKG P+ V++ +I E D
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +MI G + T I V C+EGR+ A +++ GV P Y L+
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI-- 499
Query: 340 LCGEGNAGI---ALEVVDELWKKGNLPSVIACTTLIEGLRR-------------LRKGVE 383
CG N G+ A + G P+ + T L+ L + + K E
Sbjct: 500 -CGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE 558
Query: 384 AS---GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
GL+E+M+K + + +NC L LC V R +A L + + L P Y
Sbjct: 559 MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTS 618
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ R E V+ M+ G+IP L +Y + L
Sbjct: 619 IIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSL 658
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 149/339 (43%), Gaps = 17/339 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + +++ +L + M + +PS Y ++I+ V+ D + D+M+
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEK-GVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAG 452
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KPDV T+ I + +C + + A + M + G PN+V++N LI G+ +
Sbjct: 453 IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAF 512
Query: 281 NMAYEMIELGCEFSSVTCEILVDGL----------CNEGRVLKACEL-----VIDFSRRG 325
+ M+ GC+ + + +L+ L N + K E+ +++ +
Sbjct: 513 STFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKL 572
Query: 326 VLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
LP + D + + LC A ++ E+ PS T++I RL+ EA
Sbjct: 573 QLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEA 632
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++ M+K G +P ++ ++ LC+ G A ++ +K + + + + IL+ G
Sbjct: 633 LTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDG 692
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ E +L++ M ++ + P A Y +++A
Sbjct: 693 LLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDA 731
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 106/295 (35%), Gaps = 65/295 (22%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y + + + + A MV V P++VT+N LI G+ A
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFS 513
Query: 247 LFREMREKGCNPNVVSFNTLIRGFF------------------GERKFDEGVNMAYEMIE 288
F+ M GC PN S+ L+R E K+ G+ ++
Sbjct: 514 TFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQ 573
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS-------------------------- 322
L E C + LC R+ +A L+I+
Sbjct: 574 LPSEIDIYNC--FLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTE 631
Query: 323 ---------RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
+ G +P+ Y ++ LC EG+ A +V ++ K IA LI+
Sbjct: 632 ALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILID 691
Query: 374 GLRRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
GL L+KG E S L+ M ++ P + L G+ DA+ ++ +A
Sbjct: 692 GL--LQKGYVAECSSLLSVMEEKNYRPSDALYARL------TGKITDANDIQEIA 738
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 169/327 (51%), Gaps = 3/327 (0%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ F K N + F+ M K G P + +N LI+ K ++ + ++++
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLK--QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V P++ TFNI I G CR D A L + +G P+V+S+NTLI GF K E
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++M+ G E + T +++G C G + A +++ D +G +P +F Y L+
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC +G+ A+ V E +KG S+I TL++GL + ++A LM+ M++ G P
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N ++ LC +G DA+ + A KG PD T++ L+ GY ++ + ++
Sbjct: 425 DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL 484
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ML G PD+ TYN+ ++GL ARK
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARK 511
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 178/387 (45%), Gaps = 10/387 (2%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+F T D F+H T+ ++ L +F + VL + N +E
Sbjct: 26 MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN---------VDSKMLE 76
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + ++ + + FE M D PSV YN ++N V+ F +A Y
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM + PDV T I + FC + AL L M +GC N VS+ +I GF+ E
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E ++ EM++ G +T L+ LC +G V ++ +L +RGV P F +
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC +G A +++ + +G P VI+ TLI G + K VEA + KM+
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ T+N ++ C G +AD++ A KG PD TY L++G +
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ E +++GF + YN+ + GLS
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLS 402
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV----KPDVVTFNILISGFCRNKKFD 242
P+ YN +INGF K A D+++RD + PD T++ LI+G C + +
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNA----DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ +F E EKG +++ +NTL++G + + + + +M+E GC T ++V
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC G + A ++ D +G +P F + L++ C + N A+E++D + G
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P VI TL+ GL + RK + ML++G P+ +T+N L+E C + +A L
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553
Query: 423 RLLASTKGLDPDGMTYHILVSG 444
T+GL PD +T L+ G
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICG 575
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 7/324 (2%)
Query: 153 MERIFHFAV---NAFVKA-NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREF 206
ME+ F ++ N VK ++ L A + M+ +++ P + YN+++NG K
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
A G + + PD+ TFN LI G+C+ + D A+ + M G P+V+++NTL
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ G RK D V+ M+E GC + +T IL++ C + +V +A EL + RG+
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE-AS 385
P L+ LC G A E+ + K+ A ++ + V A
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L KM PD+ T+ +++ C G A L +KGL P T +++
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Query: 446 TRENRRKEGENLVNEMLDEGFIPD 469
+R E ++N M+ G +P+
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPE 706
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++D G+L + I P + +N LI+G+ K R DKA+ D
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCI---PDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDV+T+N L++G C+ +K D + F+ M EKGC PN++++N LI F +R
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-------------- 320
K E + + EM G VT L+ GLC+ G + KA EL +
Sbjct: 546 KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIF 605
Query: 321 -------------------FSRRG---VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
F + G P ++ Y +++ C GN +A + E
Sbjct: 606 NIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENIS 665
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
KG +PS C ++ L + EA ++ M++ GI+P+ V
Sbjct: 666 KGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 135/287 (47%), Gaps = 35/287 (12%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR-----GFFGE------RKFDEG 279
++ + R K A+ +F M C P+V S+N ++ G+F + R D G
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 280 V------------------------NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+ + M GCEF++V+ ++ G E ++A
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L + ++G+ P + L+ LC +GN + ++ ++ K+G P++ I+GL
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R EA+ L+E ++ EG+ PD +++N L+ C + V+A+ G++P+
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
TY+ +++G+ + + + ++ + + +GFIPD TY+S ++GL N
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 134/283 (47%), Gaps = 4/283 (1%)
Query: 209 ALGFYDRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS--FNT 265
AL ++++ D K + T+ +I + KF+ + EMR K + ++ +
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLEGVYIG 81
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++R + + K E VN+ M CE S + +++ L G +A ++ + G
Sbjct: 82 IMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P + + ++ C G AL +++ + +G + ++ +I G + +EA
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++MLK+GI PD +TFN L+ LC G ++++L +G+ P+ T++I + G
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGL 261
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
R+ E L+ ++ EG PD+ +YN+ + G K V
Sbjct: 262 CRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 192/390 (49%), Gaps = 13/390 (3%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
IF S++ TF ++ + A+S F +H VL+ + +
Sbjct: 50 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLT---------- 99
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E IF A KA+ + + F M + + +V +N ++N ++ +F A FY
Sbjct: 100 ETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFY 159
Query: 214 DRMVRDRVK---PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ K P+++T+N++I C+ + D A+ FREM K CNP+V +++TL+ G
Sbjct: 160 LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGL 219
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
ER+ DE V + EM GC + VT +L+D L G + +A +LV + +G +P +
Sbjct: 220 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 279
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC +G AL +++++ +P+ + T+I GL + R+ + ++
Sbjct: 280 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 339
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G + ++ L+ L G++ +A RL + KG P+ + Y + G R+ +
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
E E+++ EML +GF+P+ TY+S M G
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 200/428 (46%), Gaps = 50/428 (11%)
Query: 91 YDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
+ F++ + + F+ + T+ I+++L + ++ ++ P N +F+
Sbjct: 156 FKFYLHVFGANSKGFQPNLLTYNLIIKALC---KLGQIDRAVDTFREMPLKNCNPDVFT- 211
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMR----------------------------K 182
+ +N K R+++ + + M+ K
Sbjct: 212 ------YSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265
Query: 183 LIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
L+D P+ YN LI+G + DKAL ++MV + P+ VT+ +I+G
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ ++ + + + M E+G N +++LI G F E K + V + EM E GC+ + V
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+DGLC + + +A +++ + +G LP F Y L++ +G++ A+ V E+
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ +V+ C+ L+ GL + EA + ML EG+ PD V ++ +++ LCDVG +
Sbjct: 446 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVG-S 504
Query: 417 VDADRLRLLASTKGLD----PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
VD L+L + + PD +TY+IL + R++ +L+N MLDEG PD T
Sbjct: 505 VDKG-LKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLT 563
Query: 473 YNSYMDGL 480
N +++ L
Sbjct: 564 CNIFLETL 571
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 38/253 (15%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N VK R DG+ +M + + + IY+ LI+G K + + A+ + M
Sbjct: 321 INGLVKQRRAEDGVHILMSMEER-GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 379
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KP+VV + I G CR++K D A + +EM KG PN ++++L++GFF + + +
Sbjct: 380 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + V C +L++GLC GR+ +A + G+ P Y +++ L
Sbjct: 440 LVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGL 499
Query: 341 CGEG-------------------------------------NAGIALEVVDELWKKGNLP 363
C G N A+++++ + +G P
Sbjct: 500 CDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 559
Query: 364 SVIACTTLIEGLR 376
+ C +E LR
Sbjct: 560 DSLTCNIFLETLR 572
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 19/325 (5%)
Query: 182 KLIDGRPSVSIYNV-------LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
++ RP Y + LI + REF DRM R+ V+T I I
Sbjct: 50 QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKRE---GRVLTETIFILI 106
Query: 235 FCRNKKFDL---ALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI--- 287
F K L A+ F M + C V SFN+++ E F +
Sbjct: 107 FKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 166
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + +T +++ LC G++ +A + + + P F Y L+ LC E
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ ++DE+ +G LP+ + LI+ L + A+ L++ M +G +P+ VT+N L+
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286
Query: 408 EDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
LC G+ A L + S+K + P+ +TY +++G ++ R ++G +++ M + G
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCV-PNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 345
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
+ Y+S + GL KS R
Sbjct: 346 KANEYIYSSLISGLFKEGKSENAVR 370
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 166/326 (50%), Gaps = 7/326 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V F + + L FE M+ + P IY +LING+ + + AL + M
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKG-VGLVPDTVIYTILINGYCRNDDVSGALKMRNEM 425
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V DVVT+N L++G CR K D A LF+EM E+G P+ + TLI G+ +
Sbjct: 426 VERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNM 485
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +++ M + VT L+DG C G + KA EL D R + P + L
Sbjct: 486 TKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSIL 545
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A + DE+ +KG P+++ C T+I+G R +A+ + M+ EG+
Sbjct: 546 INGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGV 605
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLAST---KGLDPDGMTYHILVSGYTRENRRKE 453
PD +T+N L+ + + DR L + +GL P+ +TY+ ++ G++R R +E
Sbjct: 606 PPDCITYNTLINSFV---KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQE 662
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
E ++++M+D+G PD +TY S ++G
Sbjct: 663 AEMVLHKMIDKGINPDKSTYTSLING 688
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 163/359 (45%), Gaps = 40/359 (11%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVK------------ 202
++ VNA+ + +++ GL+ A + L +P + YN LING K
Sbjct: 262 YNTLVNAYCRRGLVSEAFGLVDCMAGKGL---KPGLFTYNALINGLCKEGSYERAKRVLD 318
Query: 203 ---------------------CREFD--KALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
CR+ D +A ++ M++ V PD+++F+ ++ F RN
Sbjct: 319 EMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNG 378
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ AL F +M+ G P+ V + LI G+ + M EM+E GC VT
Sbjct: 379 ELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYN 438
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L++GLC + A EL + RGV P + L+ C +GN AL + + + +
Sbjct: 439 TLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLR 498
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
P V+ TL++G ++ + +A L M+ I P ++F+ L+ C +G +A
Sbjct: 499 SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEA 558
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
RL KG+ P +T + ++ GY R + + +N M+ EG PD TYN+ ++
Sbjct: 559 FRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLIN 617
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 141/308 (45%), Gaps = 4/308 (1%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA++ + V++Y N+++N K + D + M V D+VT+N L+
Sbjct: 207 LAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLV 266
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-C 291
+ +CR A GL M KG P + ++N LI G E ++ + EM+ +G C
Sbjct: 267 NAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLC 326
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
++ +LV+ C + V +A + + +RGV+P + +V G G AL
Sbjct: 327 PNAATFNPMLVES-CRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALA 385
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+++ G +P + T LI G R A + +M++ G + D VT+N LL LC
Sbjct: 386 YFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLC 445
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
DAD L +G+ PD T L+ GY ++ + +L M PD+
Sbjct: 446 RGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVV 505
Query: 472 TYNSYMDG 479
TYN+ MDG
Sbjct: 506 TYNTLMDG 513
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F + +V+A ++ +G AF+ +RK S++ N L+ VK D A Y+
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKR-GFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
V+ +V T NI+++ C++ K D EM EKG ++V++NTL+ +
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + M G + T L++GLC EG +A ++ + G+ P +
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ + C + + A V +E+ ++G +P +I+ ++++ R + A EKM G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++PD+V + L+ C A ++R +G D +TY+ L++G R + +
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
L EM++ G PD T + + G
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHG 478
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 147/339 (43%), Gaps = 46/339 (13%)
Query: 142 CSNDGIFSCPEM--ERIFHFAVNAFVKANRMNDGLL-------AFEAMRKLIDGR--PSV 190
C ND + +M E + V V N + +GL A E +++++ P
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
LI+G+ K KAL ++ M +KPDVVT+N L+ GFC+ + + A L+ +
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M + P+ +SF+ LI GF E + EM E G + + VTC ++ G G
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ KA + + GV P Y L+ E N A +++ + ++G LP+++
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
++ G R + EA ++ KM+ +GI PD
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDK------------------------------ 679
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++GY ++ KE + +EML GF+PD
Sbjct: 680 -----STYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 6/219 (2%)
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VV F+ LIR + RK EG + + G S C L+ + G V A ++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEG---NAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
DF + G + + +V LC +G N G+ L E+ +KG ++ TL+
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLS---EMEEKGVYADLVTYNTLVNAYC 270
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
R EA GL++ M +G+ P T+N L+ LC G A R+ GL P+
Sbjct: 271 RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
T++ ++ R+ E E + NEML G +PDL +++S
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N F +++ ++ M++ G +P++ N +I G+++ KA F +
Sbjct: 542 FSILINGFCSLGLVSEAFRLWDEMKE--KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNT 599
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + V PD +T+N LI+ F + + FD A L M E+G PN+V++N ++ GF +
Sbjct: 600 MISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGR 659
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E + ++MI+ G T L++G ++ + +A + + +RG +P D
Sbjct: 660 MQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 166/329 (50%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + K+ ++ L E M P V YN ++ + +A+ DR
Sbjct: 179 YNVLIGGYCKSGEIDKALEVLERMSVA----PDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI C + A+ L EMR+KGC P+VV++N LI G E +
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + M GC+ + +T I++ +C+ GR + A L+ D R+G P + L
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC + G A++V++++ K G +P+ ++ L+ G + +K A +E M+ G
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N LL LC G+ A + S+KG P +TY+ ++ G T+ + +
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM +G PD+ TY++ + GL K
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 189/377 (50%), Gaps = 15/377 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+RSL S + E VL+ C P++ + + A
Sbjct: 207 DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECY---------PDV-ITYTILIEATCND 256
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + + MRK +P V YNVLING K D+A+ F + M KP+V+T
Sbjct: 257 SGVGQAMKLLDEMRKK-GCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVIT 315
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NI++ C ++ A L +M KGC+P+VV+FN LI +R +++ +M
Sbjct: 316 HNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 375
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ GC +S++ L+ G C E ++ +A E + RG P Y L+ LC +G
Sbjct: 376 KHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 435
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++++L KG P +I T+I+GL ++ K A L+E+M ++G+ PD +T++ LL
Sbjct: 436 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495
Query: 408 EDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L G+ +A +++ +GL P +TY+ ++ G + + + + M+++G
Sbjct: 496 RGLGREGKVDEA--IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 553
Query: 466 FIPDLATYNSYMDGLSN 482
P ATY ++G+++
Sbjct: 554 CKPTEATYTILIEGIAD 570
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 155/299 (51%), Gaps = 3/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YNVLI G+ K E DKAL +RM V PDVVT+N ++ C + K A+ +
Sbjct: 174 PDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEV 230
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ C P+V+++ LI + + + + EM + GC+ VT +L++G+C
Sbjct: 231 LDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGR+ +A + + + G P + ++ +C G A ++ ++ +KG PSV+
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVT 350
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI L R R A ++EKM K G +P+S+++N LL C + A +
Sbjct: 351 FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 410
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++G PD +TY+ L++ ++ + ++N++ +G P L TYN+ +DGL+ K+
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKT 469
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 148/301 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI +A+ D M + KPDVVT+N+LI+G C+ + D A+
Sbjct: 241 PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF 300
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC PNV++ N ++R ++ + + +M+ GC S VT IL++ LC
Sbjct: 301 LNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCR 360
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + +A +++ + G +P Y L+ C E A+E ++ + +G P ++
Sbjct: 361 KRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 420
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L + K A ++ ++ +G P +T+N +++ L VG+T A L
Sbjct: 421 YNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMR 480
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KGL PD +TY L+ G RE + E + ++M P TYN+ M GL A+++
Sbjct: 481 RKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTS 540
Query: 488 R 488
R
Sbjct: 541 R 541
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N+ + V+ E ++ L F +RM+ PDV+ LI GFCR+ K A + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVL 312
G P+V+++N LI G+ + D+ A E++E + VT ++ LC+ G++
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDK----ALEVLERMSVAPDVVTYNTILRSLCDSGKLK 225
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A E++ +R P Y L+E C + G A++++DE+ KKG P V+ LI
Sbjct: 226 EAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 285
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G+ + + EA + M G P+ +T N +L +C GR +DA+RL KG
Sbjct: 286 NGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
P +T++IL++ R+ +++ +M G +P+ +YN + G +K R
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 154/301 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI K +A+ D M KPDVVT+N+LI+G C+ + D A+
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC PNV++ N ++R ++ + EMI GC S VT IL++ LC
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A +++ + G P Y L+ LC + A+E +D + +G P ++
Sbjct: 365 KGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L + K A ++ ++ +G P +T+N +++ L VG+T DA +L
Sbjct: 425 YNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMK 484
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KGL PD +TY LV G +RE + E +++ + G P+ TYNS M GL AR++V
Sbjct: 485 GKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTV 544
Query: 488 R 488
R
Sbjct: 545 R 545
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 166/385 (43%), Gaps = 26/385 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPC-------------PCSNDGIFS----- 149
D T+ I+R+L S + E VL+ C C G+
Sbjct: 211 DVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLL 270
Query: 150 -------CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
C ++ +N K R+++ + M +P+V +N+++
Sbjct: 271 DEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY-GCQPNVITHNIILRSMCS 329
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ A F M+R P VVTFNILI+ CR A+ + +M + GC PN +S
Sbjct: 330 TGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS 389
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+N L+ ++K + + M+ GC VT L+ LC +G+V A E++
Sbjct: 390 YNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLG 449
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G P Y +++ L G A++++DE+ KG P +I +TL+ GL R K
Sbjct: 450 SKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA + + G+ P+++T+N ++ LC +TV A +G P +Y IL+
Sbjct: 510 EAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569
Query: 443 SGYTRENRRKEGENLVNEMLDEGFI 467
G E KE L+NE+ G +
Sbjct: 570 EGLAYEGLAKEALELLNELCSRGVV 594
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 152/333 (45%), Gaps = 36/333 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LI G K + KA + + PDV+T+N+LISG+C+ + AL L
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202
Query: 248 FREMR--------------------------------EKGCNPNVVSFNTLIRGFFGERK 275
M ++ C P+V+++ LI E
Sbjct: 203 LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG 262
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + + EM + GC+ VT +L++G+C EGR+ +A + G P +
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLK 393
++ +C G A + + E+ +KG PSV+ LI L RKG+ A ++EKM +
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL--CRKGLIGRAIDVLEKMPQ 380
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P+S+++N LL LC + A + ++G PD +TY+ L++ ++ +
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 440
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++N++ +G P L TYN+ +DGLS K+
Sbjct: 441 AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 3/289 (1%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
V+ E ++ F + MV PD++ LI G C+ K A + + + G P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V+++N LI G+ + + + M VT ++ LC+ G++ +A E++
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+R P Y L+E C E G A++++DE+ KG P V+ LI G+ +
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA + M G P+ +T N +L +C GR +DA++ KG P +T++
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
IL++ R+ +++ +M G P+ +YN + L +K R
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 11/287 (3%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
I+RS+ S+ R+ + L + C S F+ +N + +
Sbjct: 322 IILRSMCSTGRWMDAEKFLAEMIRKGCSPS----------VVTFNILINFLCRKGLIGRA 371
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ E M + P+ YN L++ K ++ ++A+ + D MV PD+VT+N L++
Sbjct: 372 IDVLEKMPQH-GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C++ K D+A+ + ++ KGC+P ++++NT+I G K D+ + + EM G +
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+T LV GL EG+V +A D GV P Y ++ LC A++ +
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ +G P+ + LIEGL EA L+ ++ G++ S
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKS 597
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V N +R + +EG +M+ G + C L+ GLC G+ KA ++
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
G +P Y L+ C G G AL+++D + P V+ T++ L K
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGK 227
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA ++++ ++ PD +T+ L+E C A +L KG PD +TY++
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
L++G +E R E +N M G P++ T+N
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHN 321
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +L G + ++++ +G++P +IACT+LI GL + K +A+ +ME + G
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA----DR-------------LRLLASTKGLD------- 432
+PD +T+N L+ C G A DR LR L + L
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 433 --------PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY IL+ +E+ + L++EM D+G PD+ TYN ++G+
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G C + ++ ++ K + +D + + M+ +P + Y+ L+ G + +
Sbjct: 449 GSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGK-GLKPDIITYSTLVGGLSREGK 507
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D+A+ F+ + VKP+ +T+N ++ G C+ ++ A+ M +GC P S+
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
LI G E E + + E+ G S +++V
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 168/333 (50%), Gaps = 10/333 (3%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ + F +++ L FE + K + +P++ Y +LI ++ D+AL D M+
Sbjct: 83 NIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEML 142
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
++PD T+N++ G C+ K D A R + +GC P+V+++N L+R + K+D
Sbjct: 143 SRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
EG E+ GCE + VT IL+ LC +G++ ++ LV +G+ P + Y L+
Sbjct: 203 EGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C EG +A+E +D + G LP ++ T++ L + G A + K+ + G
Sbjct: 263 AAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLAS-----TKGLDPDGMTYHILVSGYTRENRRK 452
P+ ++N +L L G DR R L +KG+DPD +TY+ L+S R+
Sbjct: 323 PNVSSYNTMLSALWSSG-----DRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVD 377
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L+ +ML F P++ +Y + + GL A +
Sbjct: 378 EAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHR 410
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D +P V + LI GF R DKA ++ KPDV +N +ISGFC+ + + A
Sbjct: 5 DYQPDVILCTKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESA 63
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVD 303
+ M+ KG +P+VV+ N +I F G+ K D + + E++ + C+ + +T IL++
Sbjct: 64 KTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIE 123
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
EG + +A +L+ + RG+ P F Y + LC EG A E V L +G P
Sbjct: 124 AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP 183
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
VI L+ L K E M ++ G P+ VT++ L+ LC G+ ++ L
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV 243
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ KGL PD Y L++ + RE + ++ M+ +GF+PD+ YN+ M L
Sbjct: 244 KVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 150/304 (49%), Gaps = 1/304 (0%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
G+P V YN +I+GF K + A DRM R PDVVT NI+I FC K DLAL
Sbjct: 40 GKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLAL 99
Query: 246 GLFRE-MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+F E +++ C P ++++ LI + E DE + + EM+ G E + T ++ G
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRG 159
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC EG+V +A E V + RG P Y L+ L +G + + E++ +G P+
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ + LI L R K E+ L++ M ++G+ PD+ ++ L+ C G+ A
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD + Y+ +++ + + ++ + G P++++YN+ + L ++
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339
Query: 485 KSVR 488
R
Sbjct: 340 DRYR 343
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 154/326 (47%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + A++ +++ L + M R L P YNV+ G K + D+A F
Sbjct: 118 YTILIEAYILEGGIDEALKLLDEMLSRGL---EPDTFTYNVITRGLCKEGKVDRAFEFVR 174
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ KPDV+T+NIL+ K+D E+ +GC PNVV+++ LI +
Sbjct: 175 TLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDG 234
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K +E VN+ M E G + + L+ C EG++ A E + G LP +Y
Sbjct: 235 KIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYN 294
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC GN A+E+ +L + G P+V + T++ L A G++ +ML +
Sbjct: 295 TIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSK 354
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD +T+N L+ LC G +A L + P+ ++Y ++ G + +R +
Sbjct: 355 GIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDA 414
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
++ M++ G P+ TY ++G+
Sbjct: 415 IEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 2/288 (0%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE +R L +P V YN+L+ + ++D+ + + +P+VVT++ILIS
Sbjct: 169 AFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILIS 228
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR+ K + ++ L + M+EKG P+ ++ LI F E K D + MI G
Sbjct: 229 SLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLP 288
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V ++ LC G A E+ G P Y ++ L G+ AL ++
Sbjct: 289 DIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMI 348
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ KG P VI +LI L R EA GL+ ML P+ V++ +L LC
Sbjct: 349 SQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKA 408
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
R DA + G P+ TY +L+ G R + L N +
Sbjct: 409 HRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD----- 242
P Y+ LI F + + D A+ F D M+ D PD+V +N +++ C+N D
Sbjct: 253 PDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 243 ------------------------------LALGLFREMREKGCNPNVVSFNTLIRGFFG 272
ALG+ +M KG +P+V+++N+LI
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ DE + + +M+ + + V+ + ++ GLC R+ A E++ G P +
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETT 432
Query: 333 YFGLVEKLCGEGNAGIALEVVDELW 357
Y L+E + G+ A+E+ + L+
Sbjct: 433 YTLLIEGIGFSGSRTQAMELANSLY 457
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
N A V+ L K G P V A +I G + + A ++++M ++G PD VT N
Sbjct: 25 NIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHN 83
Query: 405 CLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
++ C G+ A ++ L P +TY IL+ Y E E L++EML
Sbjct: 84 IMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLS 143
Query: 464 EGFIPDLATYNSYMDGLSNARKSVR 488
G PD TYN GL K R
Sbjct: 144 RGLEPDTFTYNVITRGLCKEGKVDR 168
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 48/427 (11%)
Query: 84 HHPQFTHYDFHI--FAWASTIDSFRHDH------------TTFLFIVRSLASSYRFSELH 129
HHP Y+ I A ++ R H T+ ++ L R E
Sbjct: 68 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 127
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL-------AFEAMRK 182
++ ++ SC + I + N+F+ DGL A E MR
Sbjct: 128 ELIQEMTRK----------SCDVLPNIITY--NSFL------DGLCKQSMTAEACELMRS 169
Query: 183 LIDGR----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
L DG P ++ LI+G KC + D+A +D M+ P+V+T+N L++G C+
Sbjct: 170 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 229
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS---- 294
K + A + M +KG P+V++++ L+ F + DE + + + M GC +
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289
Query: 295 -SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT IL+ G C G +A L + + + P + L++ LC G A +++
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D + G P+V+ L+ GL + + EA +E+M+ G +PDS+T+ L+ LC
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
RT DA +L + G DPD +TY+ILV G + + ++ ++ EM+ +G PD T+
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469
Query: 474 NSYMDGL 480
+ GL
Sbjct: 470 AACFSGL 476
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 163/330 (49%), Gaps = 14/330 (4%)
Query: 169 RMNDGLLAFEAMRKLI--DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
R D A E R + DG P++ YN +ING K + + ++ +V PDV
Sbjct: 13 RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDV 72
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N LI C+ + A L +M +GC PNVV+++ LI G + DE + E
Sbjct: 73 VTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 132
Query: 286 MIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL---PKDFDYFGLVEKL 340
M C+ + +T +DGLC + +ACEL+ R G L P + L++ L
Sbjct: 133 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGL 191
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A V D++ G +P+VI L+ GL + K A ++E M+ +G+ PD
Sbjct: 192 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 251
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKG-----LDPDGMTYHILVSGYTRENRRKEGE 455
+T++ L++ C R +A L +++G L PD +T++IL++G + ++
Sbjct: 252 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQAS 311
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM+ + PD+ T+ + +DGL A +
Sbjct: 312 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 162/339 (47%), Gaps = 10/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K R+++ L E RK D P++ YN ++G K +A R
Sbjct: 110 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-R 168
Query: 216 MVRD---RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+RD RV PD VTF+ LI G C+ + D A +F +M G PNV+++N L+ G
Sbjct: 169 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-----VL 327
K + M M++ G +T +LVD C RV +A EL+ + RG ++
Sbjct: 229 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLV 288
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + L+ C GN A + +E+ K P V+ LI+GL + + A +
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ M G+ P+ VT+N L+ LC GR +A + + G PD +TY LV R
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+R + LV+E+ G+ PD TYN +DGL + K+
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKT 447
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 12/305 (3%)
Query: 190 VSIYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
V+ YN+++ + + +AL F M RD V P +VT+N +I+G C++ + LF
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
E+ E+G +P+VV++NTLI +E + +M GC + VT +L++GLC
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 309 GRVLKACELVIDFSRRG--VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL---P 363
GR+ +A EL+ + +R+ VLP Y ++ LC + A E++ L + G+L P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSP 179
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ +TLI+GL + + EA + + M+ G +P+ +T+N L+ LC + A +
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG-----FIPDLATYNSYMD 478
KG+ PD +TY +LV + + +R E L++ M G +PD T+N +
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299
Query: 479 GLSNA 483
G A
Sbjct: 300 GACKA 304
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 144/311 (46%), Gaps = 10/311 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN KA++M E+M +D P V Y+VL++ F K D+AL
Sbjct: 219 YNALVNGLCKADKMERAHAMIESM---VDKGVTPDVITYSVLVDAFCKASRVDEALELLH 275
Query: 215 RMVR-----DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M + + PD VTFNILI+G C+ F+ A LF EM K P+V++F LI G
Sbjct: 276 GMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 335
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + ++ M LG + VT LV GLC GR+ +AC+ + + G +P
Sbjct: 336 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 395
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y LV LC AL++V EL G P + L++GL + K +A ++E
Sbjct: 396 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M+ +G PDS TF L G L + KG+ PD T ++ R
Sbjct: 456 EMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG 515
Query: 450 RRKEGENLVNE 460
+ + + ++ E
Sbjct: 516 KLDDVKAMIKE 526
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 40/269 (14%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFR-EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
V +NI++ CR AL +FR EM G P +V++NT+I
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTII---------------- 44
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+GLC + EL + RG P Y L++ LC
Sbjct: 45 -------------------NGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 85
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG--ILPDSV 401
G+ A + ++ +G +P+V+ + LI GL ++ + EA L+++M ++ +LP+ +
Sbjct: 86 GDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 145
Query: 402 TFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L+ LC T +A L L + + PD +T+ L+ G + + E ++ +
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+M+ G++P++ TYN+ ++GL A K R
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMER 234
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 186/392 (47%), Gaps = 21/392 (5%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN---DGIFSCPEMERIFHFA 160
F D T+ +++ L + E ++LN I N G + E
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLL 364
Query: 161 VNAFVKA---------NRMNDGLL-------AFEAMRKLIDGR--PSVSIYNVLINGFVK 202
N V A N M DGL+ A E + +++ R P+V Y +LINGF K
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
++A + M + + V +N LI C++ + AL LF EM KGC P++ +
Sbjct: 425 QGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FN+LI G K +E +++ ++M G ++VT LV + +A +LV +
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
RG + Y GL++ LC G L + +E+ KG P++I+C LI GL R K
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A ++ M+ G+ PD VT+N L+ LC +G +A L ++G+ PD +TY+ L+
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
S + E + L+ + +D GFIP+ T++
Sbjct: 665 SRHCHEGMFNDACLLLYKGVDSGFIPNEVTWS 696
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGF-YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ +YN LI+G+V F++A Y+ MV +PD TFNI+I G + AL
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM K PNV+++ LI GF + + +E + M G ++V L+ LC
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G + +A +L + S +G P + + L+ LC AL + +++ +G + + +
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTV 518
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TL+ +A L+++ML G D++T+N L++ LC G L
Sbjct: 519 TYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM 578
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG+ P ++ +IL+SG R + + + +M+ G PD+ TYNS ++GL
Sbjct: 579 LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F K R+ + +M +V YN LI K ++AL + M
Sbjct: 415 YTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG-YNCLICALCKDGNIEEALQLFGEM 473
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPD+ TFN LI+G C+N K + AL L+ +M +G N V++NTL+ F
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ GC ++T L+ LC G V K L + +G+ P L
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNIL 593
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G AL+ + ++ +G P ++ +LI GL ++ EAS L K+ EGI
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
PD++T+N L+ C G DA L G P+ +T+ IL++
Sbjct: 654 RPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 172/404 (42%), Gaps = 44/404 (10%)
Query: 121 SSYRFSELHSVLNFISANPCPCS---NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAF 177
+ Y F + L +S CS + C I+ ++A + NR+++ L
Sbjct: 204 TVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLL 263
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E M L+ P V +N +I+G + +A DRM+ D +T+ L+ G CR
Sbjct: 264 EDMF-LMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR 322
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY------------- 284
+ D A R + K NPN V +NTLI G+ +F+E ++ Y
Sbjct: 323 MGQVDEA----RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAY 378
Query: 285 -----------------------EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
EM+ E + +T IL++G C +GR+ +A E+V
Sbjct: 379 TFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSM 438
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
S +G+ Y L+ LC +GN AL++ E+ KG P + +LI GL + K
Sbjct: 439 SAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKM 498
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L M EG++ ++VT+N L+ A +L +G D +TY+ L
Sbjct: 499 EEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGL 558
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + ++G L EML +G P + + N + GL K
Sbjct: 559 IKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGK 602
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 190/466 (40%), Gaps = 25/466 (5%)
Query: 24 PSIPL-PSRPETP-----PVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHF 77
PS PL S PET S + + + + T R LK L ++ + + F
Sbjct: 8 PSFPLCTSAPETNFNDHNEAESSSSSSSSSDNETEWERLLKPFDLKQLRRSLSLTPISPF 67
Query: 78 LKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISA 137
KL P +F A + H ++ L + F + +L +
Sbjct: 68 QLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMK- 126
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLI 197
++G+ E +F + + KA M + P+ YNV++
Sbjct: 127 ------DEGLLF---KESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVL 177
Query: 198 NGFVK--CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+ V C + FYD + R V P V TF +++ C + D A L R+M + G
Sbjct: 178 DILVDGDCPRVAPNV-FYDMLSRG-VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG 235
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PN V + TLI + E + + +M + CE T ++ GLC GR+ +A
Sbjct: 236 CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAA 295
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+L+ RG Y L+ LC G A +++++ P+ + TLI G
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGY 351
Query: 376 RRLRKGVEASGLM-EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ EA L+ M+ G PD+ TFN +++ L G V A L K +P+
Sbjct: 352 VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPN 411
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+TY IL++G+ ++ R +E +VN M +G + YN + L
Sbjct: 412 VITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL 457
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 1/190 (0%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
C +L+D L G +L+ G+L K+ + +++ G G A ++ ++
Sbjct: 101 ACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDM 160
Query: 357 WKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
W + P+ + +++ L A + ML G+ P TF +++ LC V
Sbjct: 161 WGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSE 220
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L + G P+ + Y L+ NR E L+ +M PD+ T+N
Sbjct: 221 VDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFND 280
Query: 476 YMDGLSNARK 485
+ GL A +
Sbjct: 281 VIHGLCRAGR 290
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 168/342 (49%), Gaps = 5/342 (1%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKC 203
G C + ++ + R+++ A++ + ++I D P ++YN LI G K
Sbjct: 84 GKMWCSPTAFTYCILIHGLCQCQRIDE---AYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A M+ PDV+T+ LI G C+ D A L +M+E G P+ V++
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N L+ G + + +E + EM+E G E + + +V LC G+ +A +++
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P Y L++ C A +++++ + P+VI TTLI G R + +
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A +ME M K GI PD VT+NCLL+ LC G+ +A L + K PD +TY ILV+
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G + + + L+ ML+ G P+L T+N+ +DG A K
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 156/325 (48%), Gaps = 42/325 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F +A+R+ D E M K P + YN L++G K + ++A + MV
Sbjct: 309 IGGFSRADRLADAYRVMEDMFK-AGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDVVT++IL++G C+ K D A L M E+GC PN+V+FNT+I GF K DEG
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M E+ C VT L+DG C R+ A F+ G+ P Y ++E L
Sbjct: 428 KVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA------FAILGISPDKASYSSMLEGL 481
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G K EA +M+ M K+G P S
Sbjct: 482 CSTG-----------------------------------KVEEAQEVMDLMTKQGCPPTS 506
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+ ++ LCDV R +A ++ + S +G +P+ TY IL++G + R ++ N+++
Sbjct: 507 SHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDV 566
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
ML++G +PD+ATY S +DG K
Sbjct: 567 MLEKGCVPDVATYTSLIDGFCKINK 591
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 176 AFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
A + RKL++ P YN L+NG K + ++ + MV +PD ++N
Sbjct: 177 ALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYN 236
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+++ C + K++ A + +M EK C P+VV++N+L+ GF K DE + +M+
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
C + +T L+ G R+ A ++ D + G+ P Y L++ LC G A
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
E+++ + +K P V+ + L+ GL +L K +A L+E ML+ G P+ VTFN +++
Sbjct: 357 HELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDG 416
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G+ + ++ L PD +TY L+ GY + NR ++ ++ G PD
Sbjct: 417 FCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPD 470
Query: 470 LATYNSYMDGLSNARK 485
A+Y+S ++GL + K
Sbjct: 471 KASYSSMLEGLCSTGK 486
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 173/377 (45%), Gaps = 15/377 (3%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ L R E + +L+ + C + +++C + K ++
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCH-PDAAVYNC---------LIAGLCKMGKI 143
Query: 171 NDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ + M R + P V Y LI G + D+A ++M + PD V +
Sbjct: 144 DAARNVLKMMLERSCV---PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G C+ + + L EM E G P+ S+NT++ K++E + +MIE
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
C VT L+DG C ++ +A L+ D R P Y L+
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A V+++++K G P ++ L++GL + K EA L+E M+++ PD VT++ L+
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC +G+ DA L + +G P+ +T++ ++ G+ + + EG ++ M + P
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
Query: 469 DLATYNSYMDGLSNARK 485
D+ TY++ +DG A +
Sbjct: 441 DVVTYSTLIDGYCKANR 457
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 2/299 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+PS S Y LI GF + L + M+ R PDV+T N ++ +C+ D AL
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
FR + C+P ++ LI G ++ DE + EMI+ C + L+ GLC
Sbjct: 81 HFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ A ++ R +P Y L+ C A ++++++ + G P +
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A L+ GL + + E S L+E+M++ G PD+ ++N ++ LC+ G+ +A ++
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K PD +TY+ L+ G+ + ++ E E L+ +M+ P + TY + + G S A +
Sbjct: 259 IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 21/365 (5%)
Query: 88 FTHYDFHIFAWASTIDSFRH----DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS 143
F+ D A+ D F+ D T+ ++ L + + E H +L + C
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA-- 369
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
P++ + VN K +++D L E M + +P++ +N +I+GF K
Sbjct: 370 -------PDV-VTYSILVNGLCKLGKVDDARLLLEMMLER-GCQPNLVTFNTMIDGFCKA 420
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D+ + M PDVVT++ LI G+C+ + A + G +P+ S+
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASY 474
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
++++ G K +E + M + GC +S +++ GLC+ R +A +++ S
Sbjct: 475 SSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSE 534
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
RG P + Y L+ LC A+ V+D + +KG +P V T+LI+G ++ K
Sbjct: 535 RGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDA 594
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A + M G PD + +N L+ C G A + L KG +PD TY L+
Sbjct: 595 AYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMR 654
Query: 444 GYTRE 448
T E
Sbjct: 655 SLTTE 659
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 2/274 (0%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F+ D KP T+ LI+GF R + L + EM + +P+V++ NT+++ +
Sbjct: 11 FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
D +++ ++ C ++ T IL+ GLC R+ +A +L+ + ++ P
Sbjct: 71 QIGDLDRA--LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ LC G A V+ + ++ +P VI T+LI G + EA LMEKM
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G+ PD+V +N LL LC + + +L G +PD +Y+ +V+ +
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+E ++ +M+++ PD+ TYNS MDG K
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSK 282
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 159/299 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V+ +N L++ K ++ +D++++ V P++ TFNI I G C+ D A+ L
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +G P+VV++NT+I G + + E ++M+ G E + T ++DG C
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V+ A ++ D +G P +F Y LV C +G+ A+ V + KG PS+I
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+GL + + A LM +M ++G PD T+N ++ LC +G DA+ L A
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
TKG PD TY+ LV GY R+ + LVN M +G PD+ TYN+ ++GL KS
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 188/380 (49%), Gaps = 10/380 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA 160
T F+H T+ +++ L +F+E+ ++L+ + +N +E ++ A
Sbjct: 111 TKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN---------LDNTLLEGVYVEA 161
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + + ++ + + FE M L + PSV YN ++N V+ F++A Y RM +
Sbjct: 162 MRFYGRKGKIQEAVDTFERM-DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKK 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+ DV T+ I I FCR + AL L R M GC N V++ T++ GF+ D
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+E T LV LC +G VL++ L +RGV P F + ++ L
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG+ A+ ++ + ++G P V+ T+I GL R + VEA + KM+ G P+
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N +++ C G VDA+R+ A KG PD TY LV+G+ ++ + + +
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
L +G P + YN+ + GL
Sbjct: 461 GLGKGLRPSIIVYNTLIKGL 480
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 167/347 (48%), Gaps = 46/347 (13%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV----KPDVVTFN 229
A E + K+++G P+ YN +I+G+ K A +R+++D V KPD T+
Sbjct: 384 AEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA----NRILKDAVFKGFKPDEFTYC 439
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L++GFC++ D A+ +F++ KG P+++ +NTLI+G + + + EM E
Sbjct: 440 SLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK 499
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC+ T ++++GLC G + A L+ D +G +P F Y LV+ C + A
Sbjct: 500 GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSA 559
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+E+V+ +W +G P VI TL+ GL + K E + + M ++G P+ +T+N ++E
Sbjct: 560 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 619
Query: 410 LCDVGRTVDADRLRLLASTKGLDPD-------------------------GM-------- 436
LC+ + +A L +KGL PD GM
Sbjct: 620 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679
Query: 437 ---TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+I++S ++ + K L +EM G PD TY +DG
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGF 726
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 164/379 (43%), Gaps = 50/379 (13%)
Query: 152 EMERIFHFAVNAFVKANRMN-----DGL----LAFEAMRKLIDG-----RPSVSIYNVLI 197
E E H VN + N DG + +A R L D +P Y L+
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
NGF + + D+A+ + + ++P ++ +N LI G C+ AL L EM EKGC
Sbjct: 443 NGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK 502
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P++ ++N +I G + ++ + I GC T LVDG C + ++ A EL
Sbjct: 503 PDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIEL 562
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
V +G+ P Y L+ LC + +E+ + +KG P++I T+IE L
Sbjct: 563 VNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCN 622
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG-------------RTVDADR--- 421
+K EA L+ +M +G+ PD V+F L+ C VG + D
Sbjct: 623 SKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTA 682
Query: 422 ------------------LRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
LRL + K G DPD TY +L+ G+ + +G + E
Sbjct: 683 TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742
Query: 462 LDEGFIPDLATYNSYMDGL 480
+++GFIP L T+ ++ L
Sbjct: 743 IEKGFIPSLTTFGRVLNCL 761
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN L++G+ + + D A+ +RM + PDV+T+N L++G C+ K + + +
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+ M EKGC PN++++NT+I +K +E V++ EM G V+ L+ G C
Sbjct: 598 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 657
Query: 308 EG------------------------------------RVLKACELVIDFSRRGVLPKDF 331
G + A L + + G P ++
Sbjct: 658 VGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNY 717
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C GN + + E +KG +PS+ ++ L K EA G++ M
Sbjct: 718 TYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLM 777
Query: 392 LKEGILPDSV 401
+++ I+PD+V
Sbjct: 778 VQKDIVPDTV 787
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 1/267 (0%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER-KFDEGV 280
K + T+ ++ + KF+ L EMR N + F+G + K E V
Sbjct: 116 KHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAV 175
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M C+ S + +++ L G +A ++ + + V + Y ++
Sbjct: 176 DTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSF 235
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G AL ++ + G + +A T++ G A L ++ML+ + PD
Sbjct: 236 CRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDV 295
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
TFN L+ LC G ++++RL +G+ P+ T++I + G +E L+
Sbjct: 296 TTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC 355
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSV 487
+ EG PD+ TYN+ + GL + V
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVV 382
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F K ++ F M K D + + YN++I+ F + AL + M
Sbjct: 648 FGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM 707
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PD T+ +LI GFC+ + E EKG P++ +F ++ E K
Sbjct: 708 KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKV 767
Query: 277 DEGVNMAYEMIE 288
E V + + M++
Sbjct: 768 QEAVGIIHLMVQ 779
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++AF + M L F M+K +G P Y VLI+GF K ++ F
Sbjct: 684 YNIIISAFSEQLNMKMALRLFSEMKK--NGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLE 741
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ P + TF +++ C K A+G+ M +K P+ V+
Sbjct: 742 NIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 165/314 (52%), Gaps = 2/314 (0%)
Query: 169 RMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+N + A + K+ + +P +N LING E +A+G ++ MVR +PDV+
Sbjct: 139 RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI 198
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+++ +I+G C++ +AL L R+M EKGC PN+V++ T+I + ++ +++ EM
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
++ G VT ++ G C+ G + +A L + R V+P + LV+ LC EG
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A V + + KKG P+ L++G + EA +++ M+ +G P ++N L
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C R +A L + S K L PD +TY L+ G + R +E NL EM G
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438
Query: 467 IPDLATYNSYMDGL 480
+PDL TY++ +DGL
Sbjct: 439 LPDLMTYSTLLDGL 452
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 162/333 (48%), Gaps = 5/333 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+++ K +ND A + + +++D P V Y+ +++GF ++A ++ MV
Sbjct: 239 IDSLCKDTLVND---AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V P+ VTF IL+ G C+ A +F M +KG PN ++N L+ G+ + DE
Sbjct: 296 RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDE 355
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M++ GC + IL++G C R+ +A L+++ S + + P Y L++
Sbjct: 356 AQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQ 415
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G AL + E+ G LP ++ +TL++GL + EA L++ M + I P
Sbjct: 416 GLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEP 475
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D V +N L+E + G+ A L G+ P TY I++ G +E E L
Sbjct: 476 DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELF 535
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+M D+GF+P+ +YN + G + S R
Sbjct: 536 RKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIR 568
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 150/287 (52%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N+LIN + A+ +M + ++PD +TFN LI+G C + A+GLF EM
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P+V+S++T+I G + + +M E GC+ + V ++D LC + V
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A +L+ + RG+ P Y ++ C G+ A + +E+ + +P+ + T L++
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + EA + E M K+G P++ T+N L++ C + +A ++ + KG P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y+IL++GY + R E ++L+ EM ++ PD TY++ M GL
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 162/316 (51%), Gaps = 1/316 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D L +F M ++ + RPSV + + K +++ + ++M V +V + N
Sbjct: 73 IDDALASFYRMLRM-NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ CR A+ + +M + G P+ ++FNTLI G E + E V + EM+
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + ++ +++GLC G A +L+ +G P Y +++ LC + A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++++ E+ +G P V+ +T++ G L EA+ L +M+ ++P++VTF L++
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G +A + + KG +P+ TY+ L+ GY N+ E + +++ M+D+G P
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV 371
Query: 470 LATYNSYMDGLSNARK 485
+ +YN ++G R+
Sbjct: 372 VHSYNILINGYCKRRR 387
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 7/321 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
++ F +N+ + F M GR P+ + +L++G K +A ++ M
Sbjct: 274 LHGFCSLGHLNEATILFNEMV----GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ +P+ T+N L+ G+C N + D A + M +KGC P V S+N LI G+ R+ D
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E ++ EM E +VT L+ GLC GR +A L + G+LP Y L+
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ LC G+ AL+++ + + P ++ LIEG+ K A L K+ +GI
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQ 509
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P T+ +++ L G + +A L G P+ +Y++++ G+ + L
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569
Query: 458 VNEMLDEGFIPDLATYNSYMD 478
++EM+ + F D +T+ +D
Sbjct: 570 IDEMVGKRFSADSSTFQMLLD 590
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 176/340 (51%), Gaps = 3/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
C + + +N + K R+ D L + +++ +G P YN +NG +
Sbjct: 249 MGCSPTKVTVNVLINGYCKLGRVEDALGYIQ--QEIANGFEPDQITYNTFVNGLCQNGHV 306
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
AL D MV++ PDV T+NI+++ C+N + + A G+ +M E+GC P++ +FNTL
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL 366
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + +E +++A ++ G T IL++ LC G A L + G
Sbjct: 367 IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC 426
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L++ LC G G AL+++ E+ G S + T+I+GL + + EA
Sbjct: 427 TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M +GI +++TFN L++ LC R DA++L ++GL P+ +TY+ +++ Y
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYC 546
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ K+ +++ M GF D+ TY + ++GL A ++
Sbjct: 547 KQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRT 586
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 1/331 (0%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H + ++ + D + L + L + +YN L+N V+ + Y
Sbjct: 115 VVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYS 174
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +KPDVVTFN L+ CR + A+ + EM G P+ +F TL++GF E
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + M+E+GC + VT +L++G C GRV A + G P Y
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYN 294
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
V LC G+ G AL+V+D + ++G+ P V ++ L + + EA G++ +M++
Sbjct: 295 TFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LPD TFN L+ LC R +A L + KGL PD T++IL++ + +
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM G PD TYN+ +D L + K
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK 445
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 5/336 (1%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++ + G+L R + P ++ +N LI ++AL
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCL---PDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ + PDV TFNILI+ C+ LAL LF EM+ GC P+ V++NTLI
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + +++ EM GC S+VT ++DGLC + R+ +A E+ +G+ +
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + A +++ ++ +G P+ I +++ + +A+ +++ M
Sbjct: 505 TLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTAN 564
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G D VT+ L+ LC GRT A +L KG+ Y+ ++ R N ++
Sbjct: 565 GFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDA 624
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
NL EM + G PD TY GL S+R+
Sbjct: 625 MNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREA 660
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 173/380 (45%), Gaps = 16/380 (4%)
Query: 107 HDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
HD F + +V L + + E +LN + C P++ F+ + A
Sbjct: 321 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGC---------LPDIT-TFNTLIVAL 370
Query: 165 VKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ + L LA + K + P V +N+LIN K + AL ++ M P
Sbjct: 371 CSGNRLEEALDLARQVTLKGLS--PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP 428
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D VT+N LI C K AL L +EM GC + V++NT+I G + + +E +
Sbjct: 429 DEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVF 488
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M G +++T L+DGLC + R+ A +L+ G+ P + Y ++ C +
Sbjct: 489 DQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQ 548
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A +++ + G V+ TLI GL + + A L+ M +G+ +
Sbjct: 549 GDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAY 608
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR-KEGENLVNEML 462
N +++ L T DA L + G PD TY I+ G R +E + + EM+
Sbjct: 609 NPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMV 668
Query: 463 DEGFIPDLATYNSYMDGLSN 482
D+GFIP+ +++ +GL N
Sbjct: 669 DKGFIPEFSSFRMLAEGLLN 688
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 164/376 (43%), Gaps = 7/376 (1%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-DGIFSCPEMERIFHFAVNAF 164
R H + +V S SY +L F+ A + D +F +++ +N
Sbjct: 106 REGHQVRVGVVHSFLESYARQQL-----FVDAVDLVLNQLDPLFGIQADTVVYNHLLNVL 160
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
V+ ++M + M + +P V +N L+ + + A+ + M V PD
Sbjct: 161 VEGSKMKLLETVYSEMGER-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD 219
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
TF L+ GF AL + M E GC+P V+ N LI G+ + ++ +
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQ 279
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+ I G E +T V+GLC G V A +++ + G P F Y +V LC G
Sbjct: 280 QEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 339
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A +++++ ++G LP + TLI L + EA L ++ +G+ PD TFN
Sbjct: 340 QLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFN 399
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ LC VG A RL + G PD +TY+ L+ + + +L+ EM
Sbjct: 400 ILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESA 459
Query: 465 GFIPDLATYNSYMDGL 480
G TYN+ +DGL
Sbjct: 460 GCPRSTVTYNTIIDGL 475
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 156/329 (47%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A +A+++ +L E M P + + L+ GFV+ AL RM
Sbjct: 188 FNTLMKALCRAHQVRTAVLMLEEMSS-SGVAPDETTFTTLMQGFVEEGSIKAALRVKARM 246
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VT N+LI+G+C+ + + ALG ++ G P+ +++NT + G
Sbjct: 247 LEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHV 306
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M++ G + T I+V+ LC G++ +A ++ RG LP + L
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL 366
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC AL++ ++ KG P V LI L ++ A L E+M G
Sbjct: 367 IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC 426
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+++LC +G+ A L + G +TY+ ++ G ++ R +E E
Sbjct: 427 TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M +G + T+N+ +DGL ++
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKR 515
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 197/415 (47%), Gaps = 31/415 (7%)
Query: 72 SSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHD----HTTFLFIVRSLASSYRFSE 127
++ LH L S L P F +FA D FR TTF ++R L S+ + +
Sbjct: 10 TASLHPLLSALPSAPAFA-----LFA-----DMFRLRLPLCTTTFNIMLRHLCSAGKPAR 59
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
L + P P + ++ + F R+ L MR+
Sbjct: 60 ---ALELLRQMPRPNA-----------VTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 105
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ Y +I+G+ K D+A+ +D M+ + VKP+ V +N LI G+C K D AL
Sbjct: 106 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL- 164
Query: 247 LFRE-MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L+R+ M E+G V ++N L+ F + + E + EM G T IL++G
Sbjct: 165 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 224
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C EG V KA E+ + SRRGV Y L+ L +G ++ DE ++G P +
Sbjct: 225 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 284
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ LI A +M +M K+ I PD VT+N L+ LC +GR +A +L
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 344
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +G+ PD +TY+ L+SGY+ + K+ + NEM+++GF P L TYN+ + GL
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 399
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 162/325 (49%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ + K R+++ + F+ M + +P +YN LI G+ + D AL + DRM
Sbjct: 111 YGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRM 170
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V V T+N+L+ + + A L EM KG P+V ++N LI G E
Sbjct: 171 VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNV 230
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + M G + VT L+ L +G+V + +L + RRG+ P Y L
Sbjct: 231 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ GN A E++ E+ KK P + TL+ GL L + EA L+++M K GI
Sbjct: 291 INSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGI 350
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+ G DA R+R KG +P +TY+ L+ G + + + EN
Sbjct: 351 QPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAEN 410
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
+V EM++ G PD +TY S ++GL+
Sbjct: 411 MVKEMVENGITPDDSTYISLIEGLT 435
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M R R+ TFNI++ C K AL L R+M PN V++NT+I
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80
Query: 269 GFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-V 326
GF + +++ EM E G + T ++ G C GRV +A ++ + +G V
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P+ Y L+ C +G AL D + ++G +V L+ L +G EA
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E+M +G+ PD T+N L+ C G A + S +G+ +TY L+ +
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ + +E + L +E + G PDL YN+ ++ S +
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
EA+R+ I RP + +YN LIN D+A M + R+ PD VT+N L+ G C
Sbjct: 274 EAVRRGI--RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 331
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L EM ++G P++V++NTLI G+ + + + + EM+ G + +T
Sbjct: 332 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 391
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
L+ GLC G+ A +V + G+ P D Y L+E L E I
Sbjct: 392 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 442
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 170/329 (51%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+A K+ R++D L E M + P+V YN LINGF K D+A+ +++M
Sbjct: 105 YTILVDALCKSARISDASLILEDMIE-AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 163
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PDV T+NILI G+C+ ++ L +EM + GC PN +++NTL+ K+
Sbjct: 164 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 223
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ N+A M+ C+ S T +++D C G++ A EL + RG LP + Y +
Sbjct: 224 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 283
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C A ++++ + + G P V+ +++ GL + + EA + E + G
Sbjct: 284 ISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 343
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VT + L++ LC R DA++L G PD + Y IL+ G+ + ++ +
Sbjct: 344 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 403
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+EMLD+G +P + TY+ +D L + +
Sbjct: 404 FFSEMLDKGCVPTVITYSIVIDKLCKSAR 432
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 2/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ + R++ L+ + M++ PSV Y +L++ K A +
Sbjct: 70 VYNTIIKGLCDNGRVDSALVHYRDMQR--HCAPSVITYTILVDALCKSARISDASLILED 127
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+VVT+N LI+GFC+ D A+ LF +M E C+P+V ++N LI G+ + +
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 187
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+G + EM++ GCE + +T L+D L G+ + A L RR P F +
Sbjct: 188 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 247
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C G +A E+ + +G LP + +I G R + +A L+E+M + G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N ++ LC + +A + + G D +T L+ G + R + E
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM G PD+ Y + G A +
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQ 397
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 162/327 (49%), Gaps = 6/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++AFV+ + + A++ + + G P Y+ LINGF K R+F +A D M +
Sbjct: 5 LSAFVRKKKAQE---AYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P +N +I G C N + D AL +R+M ++ C P+V+++ L+ + +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +MIE GC + VT L++G C G + +A L P F Y L++
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C + +++ E+ K G P+ I TL++ L + K ++A L + ML+ P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
TFN +++ C VG+ A L L + +G PD TY+I++SG R NR + L+
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
M + G PD+ TYNS + GL A +
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SC ++ ++ + K R DG + M K P+ YN L++ VK ++
Sbjct: 167 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY-GCEPNFITYNTLMDSLVKSGKYID 225
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A M+R KP TFN++I FC+ + DLA LF+ M ++GC P++ ++N +I
Sbjct: 226 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 285
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + D+ + M E GC VT +V GLC +V +A E+ G
Sbjct: 286 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 345
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
L++ LC A +++ E+ + G+ P V+A T LI G + + ++
Sbjct: 346 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 405
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ML +G +P +T++ +++ LC R D
Sbjct: 406 SEMLDKGCVPTVITYSIVIDKLCKSARVRDG 436
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 124/242 (51%), Gaps = 5/242 (2%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ VK+ + D LA +R+ D +PS +N++I+ F K + D A +
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRR--DCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M PD+ T+NI+ISG CR + D A L M E GC P+VV++N+++ G +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 276 FDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + YE++ G F VTC L+DGLC R+ A +L+ + R G P Y
Sbjct: 328 VDEAYEV-YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C +L E+ KG +P+VI + +I+ L + + + L++ ML+
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446
Query: 395 GI 396
G+
Sbjct: 447 GV 448
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N L+ F ++K E ++ + C S+T L++G C +A L+ + +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
RG++P + Y +++ LC G AL ++ ++ PSVI T L++ L + + +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
AS ++E M++ G P+ VT+N L+ C +G +A L PD TY+IL+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
GY ++ R ++G L+ EM+ G P+ TYN+ MD L + K +
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 224
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 36/147 (24%)
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF------------------------ 403
C L+ R +K EA L + L PDS+T+
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 404 -----------NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
N +++ LCD GR VD+ + + P +TY ILV + R
Sbjct: 61 KRGIVPHNAVYNTIIKGLCDNGR-VDSALVHYRDMQRHCAPSVITYTILVDALCKSARIS 119
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++ +M++ G P++ TYN+ ++G
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLING 146
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + +N ++ G K R FDKA + M + V PDV +FNILI GFCR + + A+
Sbjct: 224 KPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMK 283
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFD----------------------------- 277
++EM+++G P+VVSF+ LI F K D
Sbjct: 284 FYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 278 ------EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + + EM+ LGC VT L++GLC + R+L A EL+ + RGV P
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L+ C +GN AL++ D L + P V+A +LI+G+ R +A+ L + M
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
I P+ VT++ L++ C+ G+ +A +KG P+ MTY+ ++ GY R
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG 479
K+G+ + +M+ + +PDL T+N+ + G
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHG 551
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 152/299 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY ++I GF + +AL D MV PDVVT+N L++G C+ + A L
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEEL 389
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E+G P++ +F TLI G+ + F++ + + ++ V L+DG+C
Sbjct: 390 LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCR 449
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + KA EL D R + P Y L++ C +G A +DE+ KGNLP+++
Sbjct: 450 KGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMT 509
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++I+G R + ++KM+++ ILPD +TFN L+ A + +
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + PD +TY+++++G++ + +E + +M G PD TY S ++G A S
Sbjct: 570 KEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNS 628
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 36/313 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K +R+ D M++ P + + LI+G+ + F+KAL +D +
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKER-GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ R++PDVV +N LI G CR A L+ +M + PN V+++
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYS------------ 476
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
IL+D C +G+V +A + + +G LP Y +
Sbjct: 477 -----------------------ILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN + + ++ + LP +I TLI G + A + M KE +
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+VT+N ++ + G +A R+ G++PD TY L++G+ KE
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633
Query: 457 LVNEMLDEGFIPD 469
L +EM+ GF PD
Sbjct: 634 LHDEMMHRGFAPD 646
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 40/363 (11%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG--F 212
++F + + ++ + + AFEA R L+D R V R L
Sbjct: 88 QVFDLLIRTYTQSRKPRE---AFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKF------------------------------- 241
Y ++ + + T NI++ +C++ +F
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 242 ----DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
D A+ L M KG P +V+FN++++G R+FD+ + M + +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
IL+ G C G V +A + + +RGV P + L+ G A + E+
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G +P + T +I G R EA + ++M+ G LPD VT+N LL LC R +
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
DA+ L +G+ PD T+ L+ GY R+ ++ L + +L + PD+ YNS +
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444
Query: 478 DGL 480
DG+
Sbjct: 445 DGM 447
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I G+ + K F +M++D + PD++TFN LI G+ + + A +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M ++ P+ V++N +I GF + +E + +M G E T L++G
Sbjct: 565 FNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVT 624
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
G +A +L + RG P D
Sbjct: 625 AGNSKEAFQLHDEMMHRGFAPDD 647
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 8/334 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K N + FE M+ ++ PS+ YN L++G + + ++A+ + M
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKS-VECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 175
Query: 217 VR-------DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ DR P+V+T+++LI G C+ + A+ L M+ +GC+P+V+++ L+ G
Sbjct: 176 LDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 235
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E K + EM++ GC + VT L+ GLC RV A L+ D + RG P
Sbjct: 236 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 295
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ LC G A ++ ++ KG P ++ LI GL + + E+ L+
Sbjct: 296 VVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR 355
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ + GI PD VT++ ++ LC R +A RL L ++G PD + Y L+ G +
Sbjct: 356 RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAG 415
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ E +L M +G D+ TY++ +DGL A
Sbjct: 416 KVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 167/337 (49%), Gaps = 8/337 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++ K R++ L MR P+V YN LI+G K E D+A ++
Sbjct: 81 IYTALLSGLWKEKRLDQALAILHEMRDH-GCEPNVVTYNSLIDGLCKNNEPDRAQELFEH 139
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-------CNPNVVSFNTLIR 268
M P +VT+N L+ G R K + A+ LF+EM ++ C+PNV++++ LI
Sbjct: 140 MKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLID 199
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + + V + M GC +T ILVDGLC E +V A E++ + G +P
Sbjct: 200 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 259
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L+ LC AL ++ ++ +G P+V+ TLI+GL ++ + +A ++
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
M+ +G PD + +N L+ LC + ++ L A + G+ PD +TY ++ G R
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
NR E L+ + G PD+ Y++ +DGL A K
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 416
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 161/336 (47%), Gaps = 16/336 (4%)
Query: 163 AFVKANRMNDGLL-------AFEAMRKLIDGR---------PSVSIYNVLINGFVKCREF 206
+ V N + DGL A ++++D R P+V Y+VLI+G K
Sbjct: 148 SMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRV 207
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+A+ + M PDV+T+ IL+ G C+ K A + REM + GC PN+V++N+L
Sbjct: 208 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 267
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ G R+ + + + +M GC + VT L+DGLC GRV AC ++ D +G
Sbjct: 268 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 327
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L+ LC ++ ++ G P V+ +++I GL R + EA
Sbjct: 328 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 387
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+ + G PD + ++ L++ LC G+ +A L + + G D D +TY L+ G
Sbjct: 388 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLC 447
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ R E L+ M+ G P TYNS + GL +
Sbjct: 448 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ K R+ D A + +ID G P + IYN+LING K + D+++ R V
Sbjct: 303 IDGLCKVGRVKD---ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPDVVT++ +I G CR+ + D A L ++ +GC P+V+ ++TLI G K DE
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ M GC+ VT L+DGLC GRV +A L+ R G P Y L++
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK-----MLK 393
LC + A+E+V+E+ + PS + LI G+ R+ + A L+E+ +
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAA 539
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G D++ ++ L++ LC GR +A G+ PD +TY IL+ G + E
Sbjct: 540 GGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599
Query: 454 GENLV-NEMLDEGF 466
+LV ++M+ G+
Sbjct: 600 LRHLVLDQMVQLGY 613
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 42/341 (12%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y L+ GF + E D+A +D M + P+V +ILI G C+ K+ AL
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
FR M+ G + V + L+ G + E++ D+ + + +EM + GCE + VT L+DGLC
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 307 NEGRVLKACEL------------VIDFS-------RRGVLPK--------------DFD- 332
+A EL ++ ++ R G L + D D
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 333 --------YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
Y L++ LC A+E+++ + +G P VI T L++GL + K A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++ +ML G +P+ VT+N LL LC R DA L + +G P+ +TY L+ G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ R K+ ++ +M+D+G PDL YN ++GL A +
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 153/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ KANR++ + E+M K P V Y +L++G K + A M
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P++VT+N L+ G CR ++ AL L R+M +GC PNVV++ TLI G +
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M +MI+ G + +L++GLC +V ++ L+ G+ P Y +
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ + +G P VI +TLI+GL + K EA L E M +G
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VT++ L++ LC GR +A L G P MTY+ L+ G N E
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
LV EM P TYN + G+ +
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMER 521
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 20/380 (5%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ L + R S+ +L + A C S D I + V+ K +++
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGC--SPDVI--------TYTILVDGLCKESKV 242
Query: 171 NDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
A+E +R+++D P++ YN L++G + R AL M P+VVT+
Sbjct: 243 A---AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
LI G C+ + A + +M +KG P+++ +N LI G + DE + + +
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT ++ GLC R+ +AC L++ RG P Y L++ LC G
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A ++ + + G V+ +TLI+GL + + EA L+ +M++ G P ++T+N L++
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE-----MLD 463
LCD+ +A L P +TY+IL+ G R R L+ + +
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAA 539
Query: 464 EGFIPDLATYNSYMDGLSNA 483
G D Y+S +DGL A
Sbjct: 540 GGTALDTIAYSSLIDGLCKA 559
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 42/272 (15%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C P+V ++ L+RGF + D+ EM + C IL+DGLC R + A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
G++ Y L+ L E AL ++ E+ G P+V+ +LI+GL
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 376 RRLR------------KGVEAS-------GLMEKMLKEGIL------------------- 397
+ K VE S L++ + + G L
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 398 ----PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
P+ +T++ L++ LC R A L +G PD +TY ILV G +E++
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ EMLD G +P+L TYNS + GL AR+
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARR 276
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 164/299 (54%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + Y +M R +++ D+ +FNILI FC K AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+F TL+ G E + E ++ ++M E C + VT L++GLC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGR+++A L+ G+ P Y +V+ +C +G+ AL ++ ++ + + +P+V+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+ L + + +A L +M ++GI PD T+N ++ C GR DA++L
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + PD +TY+ L++ + +E + E E L +EML G IP+ TY+S +DG +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 175/372 (47%), Gaps = 51/372 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + R +D + M RK+ P V YN LIN FVK +F +A YD
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKI---SPDVVTYNALINAFVKEGKFFEAEELYD 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T++ +I GFC+ + D A +F M KGC+PN+++FNTLI G+ G +
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409
Query: 275 KFDEGVNMAYEMIELGCEFSS-----------------------------------VTCE 299
+ D+G+ + +EM E G + VTC+
Sbjct: 410 RIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCD 469
Query: 300 ILVDGLCNEGRVLKACEL--VIDFSRR---------GVLPKDFDYFGLVEKLCGEGNAGI 348
L+DGLC+ G++ A E+ V+ S++ GV P Y L+ L EG
Sbjct: 470 TLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLE 529
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E+ +E+ +G +P I +++I+GL + + EA+ + + M + P+ VTF L+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C GR D L +G+ + +TY L+ G+ + ++ EM+ G P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYP 649
Query: 469 DLATYNSYMDGL 480
D T + + GL
Sbjct: 650 DTITIRNMLTGL 661
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 154/300 (51%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +N+LI F C + AL + ++ + + PDVVTF L+ G C + AL
Sbjct: 111 RCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALD 170
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F +M E C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 171 FFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230
Query: 307 NEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+G + A L+ ++P Y +++ LC +G A + E+ +KG P +
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++I G + +A L+++ML+ I PD VT+N L+ G+ +A+ L
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ P+ +TY ++ G+ ++NR E++ M +G P+L T+N+ +DG A++
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 167/337 (49%), Gaps = 14/337 (4%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ D + A +RK+ + P+V IY+ +I+ K A + M + PD+
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+N +I GFC + ++ A L +EM E+ +P+VV++N LI F E KF E + E
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G +++T ++DG C + R+ A + + +G P + L++ CG
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+E++ E+ + G + TLI G + A L+++M+ G+ PD VT +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LCD G+ DA + +++ +K G++PD TY+IL+SG E + E
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L EM G +PD TY+S +DGL + T+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K R +D F M++ G P + YN +I GF + A
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDVVT+N LI+ F + KF A L+ EM +G PN ++++++I GF +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQN 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D +M Y M GC + +T L+DG C R+ EL+ + + G++ Y
Sbjct: 375 RLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
L+ G+ AL+++ E+ G P ++ C TL++GL +L+ +E +M+K
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 392 LKE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
K+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY ++
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +++R E + + M + F P++ T+ + ++G A +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 1/291 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + M+R R P VV F L+ R ++ DL + L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
++ SFN LI+ F K ++ ++ +LG VT L+ GLC E RV +A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ V A L+ KM + I+P+ V ++ +++ LC GR DA L KG+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ ++ G+ R + E L+ EML+ PD+ TYN+ ++ K
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 160/345 (46%), Gaps = 21/345 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N + R+ + + + M + DG +P+ Y +++G K + AL +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 216 MVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VV ++ +I C++ + A LF EM+EKG P++ ++N++I GF
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ + + EM+E VT L++ EG+ +A EL + RG++P Y
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYS 364
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
+++ C + A + + KG P++I TLI+G +R+ G+E L+ +M
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME---LLHEM 421
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G++ D+ T+N L+ VG A L + GL PD +T L+ G +
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 452 KEGENLVNEM------LD-----EGFIPDLATYNSYMDGLSNARK 485
K+ + M LD G PD+ TYN + GL N K
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P + + L++G + AL + M + + V+PDV T+NILISG
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L+ EM +G P+ ++++++I G + + DE M M + V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L++G C GRV EL + RRG++ Y L+ GN AL++ E+
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
G P I ++ GL + A ++EK+
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 158/325 (48%), Gaps = 2/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + R D + FE M G P V YN LI+ + + +AL +DRM
Sbjct: 370 LSLVLKGLLNDRRWKDAVCLFEEMAD--SGLPDVFTYNNLIHWHCQAHKLREALNLFDRM 427
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ VKP + T+N L+ G+C+ D A+ L+ EM +G PNVV++ TL+RG+ ++ F
Sbjct: 428 KKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDF 487
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + EM + G + T +L++G+C RV + ++ F G +P Y +
Sbjct: 488 DNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSI 547
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G G A V ++ +KG P++I T+ I+G R A ++ + + G+
Sbjct: 548 INGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD V +N L+ C G A +L ++ GL P+ + Y+ L++GY N KE
Sbjct: 608 QPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSK 667
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
M+ G + D +TY + +DG S
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFS 692
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 166/381 (43%), Gaps = 75/381 (19%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+A+++ + L F+ M+K +PS++ YN L+ G+ K D+A+ Y M + KP+V
Sbjct: 413 QAHKLREALNLFDRMKK-AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNV 471
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKG--CN-------------------------- 257
VT+ L+ G+ K FD A L EM++ G CN
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS 531
Query: 258 -------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
P ++++N++I GF + +M E G + +T +DG C G
Sbjct: 532 FMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGC 591
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A +++ D RRG+ P Y L+ C EGN AL+++ L K G P+ + +
Sbjct: 592 SDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNS 651
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGI---------------------------------- 396
LI G + L E S E M+K GI
Sbjct: 652 LITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711
Query: 397 -LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKE 453
+PD+ TF L LC G +D + +LL + LD P+ Y++L++GY R+ + +E
Sbjct: 712 YIPDAFTFTALTHGLCRSG-DIDGAK-KLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQE 769
Query: 454 GENLVNEMLDEGFIPDLATYN 474
L +EML+ G PD TY+
Sbjct: 770 AFRLHDEMLNMGIQPDDTTYD 790
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y L+ G++ ++FD A D M ++ V + T+N+LI+G C + G
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDG 527
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + +G P ++++N++I GF + +M E G + +T +DG C
Sbjct: 528 MLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYC 587
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G A +++ D RRG+ P Y L+ C EGN AL+++ L K G P+ +
Sbjct: 588 RTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTV 647
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI G + L E S E M+K GI+ D+ T+ L++ G A L
Sbjct: 648 VYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEM 707
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG PD T+ L G R + L+ EM P++ YN ++G
Sbjct: 708 MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLING 760
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 15/344 (4%)
Query: 102 IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAV 161
++ F+ + T++ ++R + F +++L+ + N C+ + ++ +
Sbjct: 464 MEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN----------DYTYNVLI 513
Query: 162 NAFVKANRMN--DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
N +R+ DG+L I P++ YN +INGFVK A Y +M
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSEGFI---PTMMTYNSIINGFVKAGMMGSAFTVYQQMREK 570
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+++T+ I G+CR D+AL + ++R +G P++V++N LI GF E
Sbjct: 571 GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + +++ G ++V L+ G N + + + + G++ Y L++
Sbjct: 631 LQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+GN ALE+ E+ KG +P T L GL R A L+E+M + + P+
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPN 750
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
+N L+ + +A RL G+ PD TY ILVS
Sbjct: 751 VFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 10/334 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLID-GRPSVSI-YNVLINGFVKCREFDKALG 211
+R++ A+ A K + DG A +R++ + G + Y +++ VK ++AL
Sbjct: 227 QRVYALAITALCK---LGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALR 283
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
D M K DV+ L+ G+C ++ AL LF+E + G P V + LIRG
Sbjct: 284 VNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCD 343
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + +M G S+ +++ GL N+ R A L + + G LP F
Sbjct: 344 QVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVF 402
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLME 389
Y L+ C AL + D + K G PS+ +L+ G +KG EA L
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY--CKKGCMDEAVKLYS 460
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M EG P+ VT+ L+ +A L G+ + TY++L++G +
Sbjct: 461 EMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVD 520
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R E + ++ + EGFIP + TYNS ++G A
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKA 554
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 117/273 (42%), Gaps = 1/273 (0%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y MV V PD+ + L+ R AL LF EMR +G + F+ L+
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E ++ V + EM + + + LC G +A ++ + G DF
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +V+ L G AL V DE+ G VI TTL+ G ++ A L ++ L
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+GI+P V + L+ VG T A L + +GL P +++ G + R K
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L EM D G +PD+ TYN+ + A K
Sbjct: 385 DAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHK 416
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F + M+ L + K DG P+ +YN LI G+ + FY+
Sbjct: 614 YNALINGFCQEGNMSHALQLLVILLK--DGLAPNTVVYNSLITGYKNLNMMKEVSKFYES 671
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ + D T+ LI GF ++ AL L+ EM KG P+ +F L G
Sbjct: 672 MIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGD 731
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + EM L + +L++G + ++ +A L + G+ P D Y
Sbjct: 732 IDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDI 791
Query: 336 LVEK 339
LV K
Sbjct: 792 LVSK 795
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + L +G + + D A + M R V+P+V +N+LI+G+ R+ K A L
Sbjct: 714 PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
EM G P+ +++ L+ +KF E N A
Sbjct: 774 HDEMLNMGIQPDDTTYDILV-----SKKFLEADNCA 804
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 223/499 (44%), Gaps = 54/499 (10%)
Query: 34 TPPVTLPSVTLTPTAHHTHLLRFLK--------THLLTPTNNQITPSSLLHFLKSKLHHH 85
T P T L +LRF K ++ L PT S +LHFL + +
Sbjct: 42 TKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPT------SKVLHFLANSKRYS 95
Query: 86 PQFTHYDFHIFAWASTIDSFRHD--------HTTFLFIVRSLASSYRFSELHSV------ 131
+ D + T+ S H T L I + + + ELH
Sbjct: 96 KVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTR 155
Query: 132 -------LNFISANPCPCS-------NDGIFSCPEM--ERI------FHFAVNAFVKANR 169
L+ S NP + D + EM RI F+ +N +A +
Sbjct: 156 AKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGK 215
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK---CREFDKALGFYDRMVRDRVKPDVV 226
+N A E M K P+V YN L++G+ K + KA F M+ +++ P+ V
Sbjct: 216 LNKAEDAIEDM-KAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEV 274
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFN LI GFC+++ A F EM+++G PN+V++N+LI G K +E +++ +M
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ LG + + VT L++G C + + +A ++ D S++ ++P + +++ C EG
Sbjct: 335 VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMM 394
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ + +G LP+V LI GL R + A L+ +M +G+ D VT+N L
Sbjct: 395 EEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ LC ++ +A++L GL P+ +TY+ L+ GY E + K N+ M E
Sbjct: 455 IDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514
Query: 467 IPDLATYNSYMDGLSNARK 485
P++ TYN + G K
Sbjct: 515 QPNVVTYNVLIKGYCKINK 533
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 165/322 (51%), Gaps = 20/322 (6%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
CP E F+ ++ F K + AFE M+K G +P++ YN LING + ++
Sbjct: 270 CPN-EVTFNTLIDGFCKDENVAAAKKAFEEMQK--QGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ +D+MV +KP++VT+N LI+GFC+ K A +F ++ ++ PNV++FNT+I
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ E +EG ++ M++ G + T L+ GLC + + A EL+ + +G+
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L++ LC + A ++++E++ G P+ + TL++G K A +
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+M KE P+ VT+N L++ C + + A+ L KGL+P+ TY I+
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRL----- 561
Query: 449 NRRKEGENLVNEMLDEGFIPDL 470
EML++GF PD+
Sbjct: 562 -----------EMLEKGFSPDI 572
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 187/406 (46%), Gaps = 15/406 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC-- 150
F W+ + ++ LA+S R+S++ S L+ N + S
Sbjct: 62 LRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLL 121
Query: 151 -----PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKC 203
I V A+VK ++ A+EA + D + S++ N L++ VK
Sbjct: 122 DGGRPGATALIIDMLVLAYVKNLELH---CAYEAFTRAKDYGFKLSLTSCNPLLSALVKE 178
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ Y M++ R+ ++ TFNI I+G CR K + A +M+ G +PNVV++
Sbjct: 179 NKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTY 238
Query: 264 NTLIRGFF---GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
NTL+ G+ K + EM+ + VT L+DG C + V A + +
Sbjct: 239 NTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEE 298
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
++G+ P Y L+ LC G A+++ D++ G P+++ LI G + +
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA+ + + + K+ ++P+ +TFN +++ C G + L +G+ P+ TY+
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L++G R+ + + L+NEM ++G D+ TYN +DGL KS
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKS 464
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 32/267 (11%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++L+ + +N + A F ++ G ++ S N L+ E K + +
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
EMI+ + T I ++GLC G++ KA + + D G+ P Y LV+ C G
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+AG K +A M++ML I P+ VTFN
Sbjct: 250 SAG--------------------------------KMYKAEAFMKEMLANKICPNEVTFN 277
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C A + +GL P+ +TY+ L++G + +E +L ++M+
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337
Query: 465 GFIPDLATYNSYMDGLSNARKSVRQTR 491
G P++ TYN+ ++G + T+
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATK 364
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 164/329 (49%), Gaps = 7/329 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++ +N RM++ E MR G+ P YN L+NGF K + L
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMR----GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MV + P+VVT+ LI+ C+ A+ +F +MR +G PN ++ TLI GF +
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+E + EMI G S VT LV G C GRV +A ++ RG+ P Y
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ C E G A ++ +E+ +KG LP + ++LI+GL +K VEA L +M++
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD VT+ L+ C G A RL +G PD +TY +L++G ++ R K
Sbjct: 516 RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKV 575
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ L+ ++ E +PD TYN+ ++ SN
Sbjct: 576 AKRLLLKLFYEESVPDDVTYNTLIENCSN 604
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 170/340 (50%), Gaps = 40/340 (11%)
Query: 188 PSVSIYNVLINGFVK-----CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
P+V YN +++ ++ R++D A + MVR+ V P+V T+N++I G +
Sbjct: 165 PTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLE 224
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
LG R+M ++G +PNVV++NTLI ++K E + + M G + ++ ++
Sbjct: 225 KGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI 284
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC +GR+ + ELV + +G++P + Y LV C EGN L ++ E+ KG
Sbjct: 285 NGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS 344
Query: 363 PSVIACTTLI---------------------EGLRR------------LRKGV--EASGL 387
P+V+ TTLI GLR +KG+ EA +
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKV 404
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M+ G P VT+N L+ C +GR +A + +GL PD ++Y +++G+ R
Sbjct: 405 LSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
E + + EM+++G +PD TY+S + GL +K V
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 53/373 (14%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
ER + ++ F + MN+ M ++ G PSV YN L++G+ +A+G
Sbjct: 382 ERTYTTLIDGFCQKGLMNEAYKVLSEM--IVSGFSPSVVTYNALVHGYCFLGRVQEAVGI 439
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
MV + PDVV+++ +I+GFCR ++ A + EM EKG P+ V++++LI+G
Sbjct: 440 LRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCL 499
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
++K E ++ EM+ G VT L++ C +G + KA L + +RG LP +
Sbjct: 500 QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVT 559
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE--------GLRRLRKGVEA 384
Y L+ L + +A ++ +L+ + ++P + TLIE + L KG
Sbjct: 560 YSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCM 619
Query: 385 SGLMEK-------MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL------------- 424
GLM + ML+ P++ +N ++ G A L +
Sbjct: 620 KGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVA 679
Query: 425 -LASTKGLDPDGMTYHI--LVSGYTRENRR--------------KEGE-----NLVNEML 462
+A K L +GM + L+ R R KEG N++ EM
Sbjct: 680 VIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739
Query: 463 DEGFIPDLATYNS 475
+G +PD ++S
Sbjct: 740 KDGLLPDGGIHSS 752
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 162/294 (55%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + Y +M R +++ D+ +FNILI FC K AL
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+F TL+ G E + E ++ ++M E C + VT L++GLC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGR+++A L+ G+ P Y +V+ +C +G+ AL ++ ++ + + +P+V+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+ L + + +A L +M ++GI PD T+N ++ C GR DA++L
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + PD +TY+ L++ + +E + E L +EML G IP+ TYNS +DG
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 370
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 169/342 (49%), Gaps = 14/342 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K R +D F M++ G P + YN +I GF + A
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQ 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDVVT+N LI+ F + KF A L+ EM +G PN +++N++I GF +
Sbjct: 315 EMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQD 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D +M Y M GC T L+DG C R+ EL+ + RRG++ Y
Sbjct: 375 RLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
L+ C G+ AL++ ++ G P ++ C TL++GL +L+ +E M+K
Sbjct: 435 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 494
Query: 392 LKE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
+ G+ PD +T+N L+ L + G+ ++A+ L +G+ PD +TY ++
Sbjct: 495 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +++R E + M + F P++ T+N+ ++G A +
Sbjct: 555 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 596
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 36/330 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +N+LI F C + AL + ++ + + PDVVTF L+ G C + AL
Sbjct: 111 RCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALD 170
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F +M E C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 171 FFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230
Query: 307 NEGRVLKACEL-------------------VID-----------------FSRRGVLPKD 330
+G + A L +ID +G+ P
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
F Y ++ C G A +++ E+ ++ P V+ LI + K EA+ L ++
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDE 350
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
ML GI+P+++T+N +++ C R A+ + L +TKG PD T+ L+ GY R
Sbjct: 351 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 410
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G L++EM G + + TYN+ + G
Sbjct: 411 IDDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 168/372 (45%), Gaps = 51/372 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + R +D + M RK+ P V YN LIN FVK +F +A YD
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKI---SPDVVTYNALINAFVKEGKFFEAAELYD 349
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T+N +I GFC+ + D A +F M KGC+P+V +F TLI G+ G +
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409
Query: 275 KFDEGVNMAYEM----------------------------IELGCEFSS-------VTCE 299
+ D+G+ + +EM ++L + S VTC
Sbjct: 410 RIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCN 469
Query: 300 ILVDGLCNEGRVLKACELVIDFSR-----------RGVLPKDFDYFGLVEKLCGEGNAGI 348
L+DGLC+ G++ A E+ + GV P Y L+ L EG
Sbjct: 470 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 529
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E+ +E+ +G +P I +++I+GL + + EA+ + M + P+ VTFN L+
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 589
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C GR D L +G+ D + Y L+ G+ + ++ EM+ G P
Sbjct: 590 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 649
Query: 469 DLATYNSYMDGL 480
D T + + G
Sbjct: 650 DTITIRNMLTGF 661
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 175/383 (45%), Gaps = 50/383 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N + R+ + + + M + DG +P+ Y +++G K + AL +
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMME--DGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 216 MVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VV ++ +I C++ + A LF EM+EKG P++ ++N++I GF
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ + + EM+E VT L++ EG+ +A EL + RG++P Y
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYN 364
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVE-------- 383
+++ C + A ++ + KG P V TTLI+G +R+ G+E
Sbjct: 365 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 424
Query: 384 ------------------------ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
A L ++M+ G+ PD VT N LL+ LCD G+ DA
Sbjct: 425 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 484
Query: 420 -DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
+ + + +K G++PD +TY+IL+ G E + E E L EM G +P
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 544
Query: 469 DLATYNSYMDGLSNARKSVRQTR 491
D TY+S +DGL + T+
Sbjct: 545 DTITYSSMIDGLCKQSRLDEATQ 567
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 1/291 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +GF + + + A+ + M+R R P VV F L+ R ++ DL + L+++M K
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
++ SFN LI+ F K ++ ++ +LG VT L+ GLC E RV +A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ P + L+ LC EG A+ ++D + + G P+ I T+++G+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 376 RRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ V A L+ KM + I+P+ V ++ +++ LC GR DA L KG+ PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ ++ G+ R + E L+ EML+ PD+ TYN+ ++ K
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P + N L++G + AL + M + + V+PDV+T+NILI G
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L+ EM +G P+ ++++++I G + + DE M M + V
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 582
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L++G C GRV EL + RRG++ Y L+ GN AL++ E+
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
G P I ++ G + A ++E +
Sbjct: 643 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS----IYNVLINGFVKCREFDKALGF 212
F+ +N + KA R++DGL F M GR + IY LI GF K + AL
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEM-----GRRGIVADAIIYITLIYGFRKVGNINGALDI 638
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ M+ V PD +T +++GF ++ + A+ + +++
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 169/329 (51%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + K+ +++ L + M + P V YN ++ + +A+ DR
Sbjct: 187 YNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI C+ A+ L EMR KG P+VV++N LI G E +
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + M GC+ + +T I++ +C+ GR + A +L+ D R+G P + L
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G G A+++++++ G P+ ++ L+ G + +K A ++ M+ G
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N LL LC G+ A + S+KG P +TY+ ++ G ++ + +
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM +G PD+ TY+S + GLS K
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGK 511
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 151/301 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI K +A+ D M KPDVVT+N+LI+G C+ + D A+
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC PNV++ N ++R ++ + + +M+ GC S VT IL++ LC
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A +++ G P Y L+ C E A+E +D + +G P ++
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L + K A ++ ++ +G P +T+N +++ L VG+T A +L
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KGL PD +TY LVSG +RE + E +++ G P+ TYNS M GL +R++
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 548
Query: 488 R 488
R
Sbjct: 549 R 549
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 183/374 (48%), Gaps = 11/374 (2%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+R+L S + + VL+ C P++ + + A K
Sbjct: 215 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY---------PDV-ITYTILIEATCKE 264
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + + MR +P V YNVLING K D+A+ F + M +P+V+T
Sbjct: 265 SGVGQAMKLLDEMRNK-GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 323
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NI++ C ++ A L +M KGC+P+VV+FN LI + +++ +M
Sbjct: 324 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 383
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC +S++ L+ G C E ++ +A E + RG P Y L+ LC +G
Sbjct: 384 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 443
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+A+E++++L KG P +I T+I+GL ++ K A L+++M ++G+ PD +T++ L+
Sbjct: 444 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L G+ +A + G+ P+ +TY+ ++ G + + + + M+ +
Sbjct: 504 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 563
Query: 468 PDLATYNSYMDGLS 481
P ATY ++G++
Sbjct: 564 PTEATYTILIEGIA 577
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
V+ + DG E+M D P + LI GF + + KA + + + P
Sbjct: 124 LVRNGELEDGFKFLESMVYRGD-IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVP 182
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
DV+T+N+LISG+C++ + D AL + M P+VV++NT++R K + + +
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVL 239
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ C +T IL++ C E V +A +L+ + +G P Y L+ +C E
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A++ ++ + G P+VI ++ + + ++A L+ ML++G P VTF
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ LC G A + G P+ ++Y+ L+ G+ +E + ++ M+
Sbjct: 360 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 419
Query: 464 EGFIPDLATYNSYMDGL 480
G PD+ TYN+ + L
Sbjct: 420 RGCYPDIVTYNTLLTAL 436
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
V+ E + F + MV PD++ LI GFCR K A + + + G P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V+++N LI G+ + D + + M VT ++ LC+ G++ +A E++
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
++ P Y L+E C E G A++++DE+ KG+ P V+ LI G+ +
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA + M G P+ +T N +L +C GR +DA++L KG P +T++
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
IL++ R+ +++ +M G P+ +YN + G +K R
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR 409
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T I+RS+ S+ R+ + +L+ + C P + F+ +N + +
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCS---------PSVV-TFNILINFLCRQGLL 372
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ E M + P+ YN L++GF K ++ D+A+ + D MV PD+VT+N
Sbjct: 373 GRAIDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++ C++ K D+A+ + ++ KGC+P ++++NT+I G K + + + EM G
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 491
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ +T LV GL EG+V +A + D G+ P Y ++ LC A+
Sbjct: 492 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 551
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ + + K P+ T LIEG+ EA L+ ++ G++ S
Sbjct: 552 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKS 601
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+R + ++G M+ G + C L+ G C G+ KA ++ + G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+P Y L+ C G AL+V+D + P V+ T++ L K +A
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
++++ L++ PD +T+ L+E C A +L KG PD +TY++L++G
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYN 474
+E R E +N M G P++ T+N
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHN 325
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +L G + ++ + +G++P +I CT+LI G R+ K +A+ +ME + + G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA----DRL--------------------RLLASTKGLD 432
+PD +T+N L+ C G +A DR+ +L + + LD
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 433 --------PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY IL+ +E+ + L++EM ++G PD+ TYN ++G+
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 296
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 169/329 (51%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + K+ +++ L + M + P V YN ++ + +A+ DR
Sbjct: 130 YNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI C+ A+ L EMR KG P+VV++N LI G E +
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + M GC+ + +T I++ +C+ GR + A +L+ D R+G P + L
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G G A+++++++ G P+ ++ L+ G + +K A ++ M+ G
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N LL LC G+ A + S+KG P +TY+ ++ G ++ + +
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM +G PD+ TY+S + GLS K
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGK 454
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 151/301 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI K +A+ D M KPDVVT+N+LI+G C+ + D A+
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC PNV++ N ++R ++ + + +M+ GC S VT IL++ LC
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A +++ G P Y L+ C E A+E +D + +G P ++
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L + K A ++ ++ +G P +T+N +++ L VG+T A +L
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KGL PD +TY LVSG +RE + E +++ G P+ TYNS M GL +R++
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 491
Query: 488 R 488
R
Sbjct: 492 R 492
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 183/374 (48%), Gaps = 11/374 (2%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+R+L S + + VL+ C P++ + + A K
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY---------PDV-ITYTILIEATCKE 207
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + + MR +P V YNVLING K D+A+ F + M +P+V+T
Sbjct: 208 SGVGQAMKLLDEMRNK-GSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NI++ C ++ A L +M KGC+P+VV+FN LI + +++ +M
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 326
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC +S++ L+ G C E ++ +A E + RG P Y L+ LC +G
Sbjct: 327 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 386
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+A+E++++L KG P +I T+I+GL ++ K A L+++M ++G+ PD +T++ L+
Sbjct: 387 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L G+ +A + G+ P+ +TY+ ++ G + + + + M+ +
Sbjct: 447 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 506
Query: 468 PDLATYNSYMDGLS 481
P ATY ++G++
Sbjct: 507 PTEATYTILIEGIA 520
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 4/317 (1%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
V+ + DG E+M D P + LI GF + + KA + + + P
Sbjct: 67 LVRNGELEDGFKFLESMVYRGD-IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVP 125
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
DV+T+N+LISG+C++ + D AL + M P+VV++NT++R K + + +
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVL 182
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ C +T IL++ C E V +A +L+ + +G P Y L+ +C E
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A++ ++ + G P+VI ++ + + ++A L+ ML++G P VTF
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ LC G A + G P+ ++Y+ L+ G+ +E + ++ M+
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 362
Query: 464 EGFIPDLATYNSYMDGL 480
G PD+ TYN+ + L
Sbjct: 363 RGCYPDIVTYNTLLTAL 379
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
V+ E + F + MV PD++ LI GFCR K A + + + G P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V+++N LI G+ + D + + M VT ++ LC+ G++ +A E++
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
++ P Y L+E C E G A++++DE+ KG+ P V+ LI G+ +
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA + M G P+ +T N +L +C GR +DA++L KG P +T++
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
IL++ R+ +++ +M G P+ +YN + G +K R
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR 352
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
I+RS+ S+ R+ + +L+ + C S F+ +N + +
Sbjct: 269 IILRSMCSTGRWMDAEKLLSDMLRKGCSPS----------VVTFNILINFLCRQGLLGRA 318
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ E M + P+ YN L++GF K ++ D+A+ + D MV PD+VT+N L++
Sbjct: 319 IDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 377
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C++ K D+A+ + ++ KGC+P ++++NT+I G K + + + EM G +
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+T LV GL EG+V +A + D G+ P Y ++ LC A++ +
Sbjct: 438 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ K P+ T LIEG+ EA L+ ++ G++ S
Sbjct: 498 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKS 544
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+R + ++G M+ G + C L+ G C G+ KA ++ + G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+P Y L+ C G AL+V+D + P V+ T++ L K +A
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
++++ L++ PD +T+ L+E C A +L KG PD +TY++L++G
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYN 474
+E R E +N M G P++ T+N
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHN 268
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +L G + ++ + +G++P +I CT+LI G R+ K +A+ +ME + + G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA----DRL--------------------RLLASTKGLD 432
+PD +T+N L+ C G +A DR+ +L + + LD
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 433 --------PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY IL+ +E+ + L++EM ++G PD+ TYN ++G+
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 175/365 (47%), Gaps = 36/365 (9%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ D + F M KL P+V YN LI+G K D+A F ++
Sbjct: 315 LFSTAINAFCKGGKVEDAIQLFFDMEKL-GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 373
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV+D V ++T+++LI+G + +KF+ A + +E EKG PN V +NTLI G+
Sbjct: 374 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 433
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA-CELVIDFSR----------- 323
+ + + +M+ G +SVT ++ G C G++ +A C L SR
Sbjct: 434 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493
Query: 324 -----------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
R + P D LV LC EG A+E+ L +KG
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+++ LI GL + EA L++KML+ G + D +T+N L+ C G+ +
Sbjct: 554 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 613
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+LR +G++PD TY++L+ G R + E NL NE +P++ TY +DG
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 673
Query: 481 SNARK 485
A K
Sbjct: 674 CKADK 678
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 40/378 (10%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+N G+F P + + F +++ VKAN + FE MR+ + P V +++ IN F K
Sbjct: 271 ANKGVF--PTV-KTCTFLLSSLVKANELEKSYWVFETMRQGVS--PDVYLFSTAINAFCK 325
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ + A+ + M + V P+VVT+N LI G C++ D A +M + G N +++
Sbjct: 326 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 385
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
++ LI G KF+E ++ E +E G + V L+DG C G + A + D
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG---------------------- 360
+G+ P +++ C G A +++E+ +G
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
Query: 361 ------------NL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
N+ P+ TTL+ GL + K +A L ++L++G + VT N L+
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G +A RL +G D +TY+ L+SG +E + +EG L EM+ +G
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
Query: 468 PDLATYNSYMDGLSNARK 485
PD TYN + G+ K
Sbjct: 626 PDTFTYNLLIHGMCRIGK 643
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 139/268 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+G K + ++ MV+ ++PD T+N+LI G CR K D A+ L+ E +
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 655
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ PNV ++ +I G+ K +EG + E++ E +SV L+ C G +
Sbjct: 656 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 715
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L D +G+ P Y L+ +C G A ++DE+ K+G LP+V+ T LI
Sbjct: 716 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 775
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + + ++++M I P+ +T+ +++ G A +L KG+
Sbjct: 776 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 835
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNE 460
PD +TY++L +G+ +E + +EG+ L +
Sbjct: 836 PDTVTYNVLTNGFCKEGKIEEGKLLAED 863
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 17/349 (4%)
Query: 154 ERIFHFAVNAFVKANRMNDGLL---------------AFEAMRKLIDGRPSVSIY--NVL 196
E F ++ R NDGLL A E +L++ ++ N L
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 564
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
I+G K +A+ +M+ D +T+N LISG C+ K + L EM ++G
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
P+ ++N LI G K DE VN+ E + T +++DG C ++ + +
Sbjct: 625 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 684
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
L + + + Y L+ C GN A ++ D++ KG P+ ++LI G+
Sbjct: 685 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 744
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + +A L+++M KEG+LP+ V + L+ C +G+ + S+ + P+ +
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 804
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY +++ GY++ K L++EM+ +G +PD TYN +G K
Sbjct: 805 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 853
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 223/515 (43%), Gaps = 57/515 (11%)
Query: 20 PPPAPSIPLPSRPET--------PPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNN---- 67
P P P +RP T PP LPS P++ H LL+ + + L P+ +
Sbjct: 76 PKPTPIFCPIARPLTCVTSAAPHPPSPLPSQNQPPSSDHA-LLKSVTSILSNPSLDSTQC 134
Query: 68 -QITPSSLLH-----FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLAS 121
Q+ P H F + + +P+ T +F F +AS FR ++ ++RSL
Sbjct: 135 KQLIPHLSPHQFDSVFFSVRRNVNPK-TALNF--FYFASDSCGFRFTLRSYCVLMRSLIV 191
Query: 122 SYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR 181
S S +L + P +F P+ I +A N + + +A A+
Sbjct: 192 SGFVSPARLLLIRLIDRKLPV----LFGDPKNRHIE--IASAMADLNEVGESGVAVAAVD 245
Query: 182 KLIDGR-------------------------PSVSIYNVLINGFVKCREFDKALGFYDRM 216
LI P+V L++ VK E +K+ ++ M
Sbjct: 246 LLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM 305
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R V PDV F+ I+ FC+ K + A+ LF +M + G +PNVV++N LI G
Sbjct: 306 -RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE +M++ G + +T +L++GL + +A ++ + +G P + Y L
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 424
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN G AL + ++ KG P+ + ++I+G ++ + +A ++E+ML G
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ F ++ LC R A R + + P+ LV G +E + +
Sbjct: 485 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 544
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL---SNARKSVR 488
L +L++GF +L T N+ + GL N +++VR
Sbjct: 545 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ F K +M E M + P + +I+ F+ AL F M+
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHWLCMNSRFESALRFLREMLLR 517
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++P+ L+ G C+ K A+ L+ + EKG N+V+ N LI G E
Sbjct: 518 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 577
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + +M+E G +T L+ G C EG+V + +L + ++G+ P F Y L+
Sbjct: 578 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 637
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+C G A+ + +E + +P+V +I+G + K E L ++L + + +
Sbjct: 638 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 697
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
SV +N L+ C G TV+A +L +KG+ P TY L+ G R ++ + L++
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757
Query: 460 EMLDEGFIPDLATYNSYMDG 479
EM EG +P++ Y + + G
Sbjct: 758 EMRKEGLLPNVVCYTALIGG 777
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 40/363 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N +K + N+ A +++ ++ P+ +YN LI+G+ K AL
Sbjct: 386 YSVLINGLMKLEKFNE---ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 215 RMVRDRVKPDVVTFNILISGFCR-----------------------------------NK 239
MV + P+ VT N +I GFC+ N
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+F+ AL REM + PN TL+ G E K + V + + ++E G + VT
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ GLC G + +A L+ RG + Y L+ C EG ++ E+ K+
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P LI G+ R+ K EA L + ++P+ T+ +++ C + +
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++L T+ L+ + + Y+ L+ Y R E L ++M +G P ATY+S + G
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742
Query: 480 LSN 482
+ N
Sbjct: 743 MCN 745
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P+V Y V+I+G+ K + ++ + ++ ++ + V +N LI +CRN A
Sbjct: 658 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 717
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +MR KG P ++++LI G
Sbjct: 718 FKLHDDMRSKGIPPTTATYSSLIH-----------------------------------G 742
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+CN GR+ A L+ + + G+LP Y L+ C G + V+ E+ P+
Sbjct: 743 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 802
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
I T +I+G + A+ L+ +M+ +GI+PD+VT+N L C G+ + L
Sbjct: 803 KITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLL 860
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + K +M+ + + M D P+ Y V+I+G+ K + A MV
Sbjct: 775 IGGYCKLGQMDKVVNVLQEMSSY-DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833
Query: 221 VKPDVVTFNILISGFCRNKKFD 242
+ PD VT+N+L +GFC+ K +
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIE 855
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ +N F K ++D F+ + K +P+V +N LING+ K D+ +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + R +PDV T++ LI+ C+ K D A GLF EM ++G PN V F TLI G +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +M+ G + V LV+G C G ++ A +V RRG+ P Y
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G+ ALE+ E+ + G + + L+ G+ + + ++A + +ML+ G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD VT+ +++ C G +L + G P +TY++L++G + + K +
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
L++ ML+ G +PD TYN+ ++G
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEG 564
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 8/334 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N + K +++G M K RP V Y+ LIN K + D A G +D M
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEK-SRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ V F LI G RN + DL +++M KG P++V +NTL+ GF
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
N+ MI G +T L+DG C G V A E+ + + G+ + L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG--LMEKMLKE 394
V +C EG A + E+ + G P + T +++ +KG +G L+++M +
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF--CKKGDAQTGFKLLKEMQSD 514
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G +P VT+N LL LC +G+ +AD L G+ PD +TY+ L+ G+ R +
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR 574
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
E+ G + DLA+Y S ++ L A K R
Sbjct: 575 YIQKPEI---GIVADLASYKSIVNELDRASKDHR 605
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 10/426 (2%)
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQF--THYDFHIFAWASTIDSFRHDHTTFLFIVRSLAS 121
P+ ++ PS +H + ++H+P F F + S+ FR T+ + R LA
Sbjct: 71 PSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAV 130
Query: 122 SYRFSELHSVLNFISANPCPCSNDGIF-SCPEMER--IFHFAVNA----FVKANRMNDGL 174
F+E S++ + + S +F S EM + F V+A + + D +
Sbjct: 131 HEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI 190
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
F RK P N L++ +K GFY ++ +V FNIL++
Sbjct: 191 QCFRLSRKHRFDVPIRGCGN-LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNK 249
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
FC+ A +F E+ ++ P VVSFNTLI G+ DEG + ++M +
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
T L++ LC E ++ A L + +RG++P D + L+ G + E
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ KG P ++ TL+ G + V A +++ M++ G+ PD +T+ L++ C G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A +R G++ D + + LV G +E R + E + EML G PD TY
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 475 SYMDGL 480
MD
Sbjct: 490 MMMDAF 495
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A + +++ K + P V+FN L+ C VG + RL+ PD TY L+
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ +EN+ L +EM G IP+ + + + G S
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C L++ + +L G ++L G + FN L+ C G DA ++
Sbjct: 207 GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + L P ++++ L++GY + EG L ++M PD+ TY++ ++ L K
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK 325
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 175/365 (47%), Gaps = 36/365 (9%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ D + F M KL P+V YN LI+G K D+A F ++
Sbjct: 248 LFSTAINAFCKGGKVEDAIQLFFDMEKL-GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 306
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV+D V ++T+++LI+G + +KF+ A + +E EKG PN V +NTLI G+
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA-CELVIDFSR----------- 323
+ + + +M+ G +SVT ++ G C G++ +A C L SR
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426
Query: 324 -----------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
R + P D LV LC EG A+E+ L +KG
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+++ LI GL + EA L++KML+ G + D +T+N L+ C G+ +
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+LR +G++PD TY++L+ G R + E NL NE +P++ TY +DG
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606
Query: 481 SNARK 485
A K
Sbjct: 607 CKADK 611
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+G K + ++ MV+ ++PD T+N+LI G CR K D A+ L+ E +
Sbjct: 529 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ PNV ++ +I G+ K +EG + E++ E +SV L+ C G +
Sbjct: 589 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 648
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L D +G+ P Y L+ +C G A ++DE+ K+G LP+V+ T LI
Sbjct: 649 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 708
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + + ++++M I P+ +T+ +++ G A +L KG+
Sbjct: 709 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIV 768
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
PD +TY++L +G+ +E + +EG + + M EG D TY + + G Q
Sbjct: 769 PDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTNQ 825
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 40/378 (10%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+N G+F P + + F +++ VKAN + FE MR+ + P V +++ IN F K
Sbjct: 204 ANKGVF--PTV-KTCTFLLSSLVKANELEKSYWVFETMRQGVS--PDVYLFSTAINAFCK 258
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ + A+ + M + V P+VVT+N LI G C++ D A +M + G N +++
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
++ LI G KF+E ++ E +E G + V L+DG C G + A + D
Sbjct: 319 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG---------------------- 360
+G+ P +++ C G A +++E+ +G
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Query: 361 ------------NL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
N+ P+ TTL+ GL + K +A L ++L++G + VT N L+
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G +A RL +G D +TY+ L+SG +E + +EG L EM+ +G
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
Query: 468 PDLATYNSYMDGLSNARK 485
PD TYN + G+ K
Sbjct: 559 PDTFTYNLLIHGMCRIGK 576
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 17/349 (4%)
Query: 154 ERIFHFAVNAFVKANRMNDGLL---------------AFEAMRKLIDGRPSVSIY--NVL 196
E F ++ R NDGLL A E +L++ ++ N L
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 497
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
I+G K +A+ +M+ D +T+N LISG C+ K + L EM ++G
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
P+ ++N LI G K DE VN+ E + T +++DG C ++ + +
Sbjct: 558 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 617
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
L + + + Y L+ C GN A ++ D++ KG P+ ++LI G+
Sbjct: 618 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 677
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + +A L+++M KEG+LP+ V + L+ C +G+ + S+ + P+ +
Sbjct: 678 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 737
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY +++ GY++ K L++EM+ +G +PD TYN +G K
Sbjct: 738 TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 223/515 (43%), Gaps = 57/515 (11%)
Query: 20 PPPAPSIPLPSRPET--------PPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNN---- 67
P P P +RP T PP LPS P++ H LL+ + + L P+ +
Sbjct: 9 PKPTPIFCPIARPLTCVTSAAPHPPSPLPSQNQPPSSDHA-LLKSVTSILSNPSLDSTQC 67
Query: 68 -QITPSSLLH-----FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLAS 121
Q+ P H F + + +P+ T +F F +AS FR ++ ++RSL
Sbjct: 68 KQLIPHLSPHQFDSVFFSVRRNVNPK-TALNF--FYFASDSCGFRFTLRSYCVLMRSLIV 124
Query: 122 SYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR 181
S S +L + P +F P+ I +A N + + +A A+
Sbjct: 125 SGFVSPARLLLIRLIDRKLPV----LFGDPKNRHIE--IASAMADLNEVGESGVAVAAVD 178
Query: 182 KLIDGR-------------------------PSVSIYNVLINGFVKCREFDKALGFYDRM 216
LI P+V L++ VK E +K+ ++ M
Sbjct: 179 LLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM 238
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R V PDV F+ I+ FC+ K + A+ LF +M + G +PNVV++N LI G
Sbjct: 239 -RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE +M++ G + +T +L++GL + +A ++ + +G P + Y L
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN G AL + ++ KG P+ + ++I+G ++ + +A ++E+ML G
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ F ++ LC R A R + + P+ LV G +E + +
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 477
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL---SNARKSVR 488
L +L++GF +L T N+ + GL N +++VR
Sbjct: 478 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 3/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ F K +M E M + P + +I+ F+ AL F M+
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHWLCMNSRFESALRFLREMLLR 450
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++P+ L+ G C+ K A+ L+ + EKG N+V+ N LI G E
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + +M+E G +T L+ G C EG+V + +L + ++G+ P F Y L+
Sbjct: 511 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 570
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+C G A+ + +E + +P+V +I+G + K E L ++L + + +
Sbjct: 571 MCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELN 630
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
SV +N L+ C G TV+A +L +KG+ P TY L+ G R ++ + L++
Sbjct: 631 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 690
Query: 460 EMLDEGFIPDLATYNSYMDG 479
EM EG +P++ Y + + G
Sbjct: 691 EMRKEGLLPNVVCYTALIGG 710
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 40/363 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N +K + N+ A +++ ++ P+ +YN LI+G+ K AL
Sbjct: 319 YSVLINGLMKLEKFNE---ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 215 RMVRDRVKPDVVTFNILISGFCR-----------------------------------NK 239
MV + P+ VT N +I GFC+ N
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+F+ AL REM + PN TL+ G E K + V + + ++E G + VT
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ GLC G + +A L+ RG + Y L+ C EG ++ E+ K+
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P LI G+ R+ K EA L + ++P+ T+ +++ C + +
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++L T+ L+ + + Y+ L+ Y R E L ++M +G P ATY+S + G
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675
Query: 480 LSN 482
+ N
Sbjct: 676 MCN 678
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 199/405 (49%), Gaps = 22/405 (5%)
Query: 87 QFTHYDFHIFAWASTID-SFRHDHTTFLFIVRSLASSYRFS---ELHSVLNFISANPCPC 142
+ H DF + W + D TF ++ + + + EL+
Sbjct: 140 RLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY------------- 186
Query: 143 SNDGIFSCPEMERI-FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGF 200
N+ + S E + I ++ +N + N + F+ M + +G +P+V YN +I+
Sbjct: 187 -NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ--NGCKPNVVTYNTIIDSL 243
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K R + A+ F MV + PD +T+N ++ G C + + A LF+ M + GC P+V
Sbjct: 244 CKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDV 303
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++N +I + +R ++ + EM++ G VT ++ GLC G++ +A L
Sbjct: 304 VTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
++G P Y +++ LC + A+E + E+ +G P+ + +T++ G L +
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA+ L ++M+ ++P+++TF+ L++ LC G +A + + KG++P+ TY+
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++GY + E + M+ +G PDL +YN ++G N+R+
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 3/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V+ ++N+ F+ M + +G +P V YN++I+ K R + A F
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQ--NGCKPDVVTYNIIIDSLYKDRLVNDAADFLSE 328
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + PDVVT+ ++ G C + + A+ LF++M +KGC P+VV++NT+I +R
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + EM++ G ++VT ++ G CN G++ +A +L + R V+P +
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV+ LC EG A V + + +KG P++ L+ G K EA + E M+ +G
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD ++N L+ C+ R A L S K L P+ +TY+ ++ G R + +
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L +M G +P L TY+ ++GL
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGL 593
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 150/294 (51%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V N+LIN + D A+ + +M + ++PDV+TF LI+G C K +A+ L+
Sbjct: 127 TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELY 186
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM G P+V+S+NTLI G + V++ +M + GC+ + VT ++D LC +
Sbjct: 187 NEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
V A + + + RG+ P Y +V LC G A + + + G P V+
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+I+ L + R +A+ + +M+ +GI PD VT+ +L LC +G+ +A RL
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG PD + Y+ ++ ++ + ++EM+D G P+ TY++ + G N
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 182/375 (48%), Gaps = 15/375 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ IV L + +E + + N C P++ ++ +++ K
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK---------PDVVT-YNIIIDSLYKD 316
Query: 168 NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ND A + + +++D P V Y +++G + ++A+ + +M + KPDV
Sbjct: 317 RLVND---AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
V +N +I C+++ + A+ EM ++G PN V+++T++ GF + DE + E
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ +++T ILVDGLC EG V +A + + +GV P + Y L+ C
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A +V + + KG P + + LI G R+ +A L+ +M + + P++VT+N
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+++ LC VGR +DA L + G+ P MTY IL++G + E L M ++
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613
Query: 466 FIPDLATYNSYMDGL 480
PD+ Y ++G+
Sbjct: 614 LEPDIILYTILIEGM 628
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D AL + RM R +P +V F + + K++ + L +M G V S N L
Sbjct: 75 DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I D V++ +M +LG + +T L++G+CNEG++ A EL + R G
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L+ LC GN +A+ V ++ + G P+V+ T+I+ L + R +A
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ +M+ GI PD++T+N ++ LC +G+ +A RL G PD +TY+I++
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ + + ++EM+D+G PD+ TY + + GL
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 1/315 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D L +F M ++ + RPS+ + + K +++ + ++M V V + N
Sbjct: 74 VDDALASFYRMARM-NPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ CR D A+ ++ +M + G P+V++F TLI G E K V + EM+
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E ++ L++GLCN G A + + G P Y +++ LC + A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ + E+ +G P I +++ GL L + EA+ L ++M + G PD VT+N +++
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
L DA +G+ PD +TY ++ G + E L +M +G PD
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372
Query: 470 LATYNSYMDGLSNAR 484
+ YN+ +D L R
Sbjct: 373 VVAYNTIIDSLCKDR 387
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 148/303 (48%), Gaps = 5/303 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +++ K +ND A E + +++D P+ Y+ +++GF + D+A +
Sbjct: 376 YNTIIDSLCKDRLVND---AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFK 432
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV V P+ +TF+IL+ G C+ A +F M EKG PN+ ++N L+ G+
Sbjct: 433 EMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRC 492
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K +E + M+ GC + IL++G CN R+ KA L+ S + + P Y
Sbjct: 493 KMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYN 552
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ LC G A E+ ++ G LP+++ + L+ GL + EA L + M ++
Sbjct: 553 TIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD + + L+E + G+ A L S G+ P G TY++++ G +E E
Sbjct: 613 KLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672
Query: 455 ENL 457
L
Sbjct: 673 YEL 675
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 1/292 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +ING K + A+ + +M + RV P+++ +N +I G C+ D A GL EM
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMV 237
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCNEGRV 311
E G +V S+N++I GF +F V + EM+ G + V T IL+DGLC GRV
Sbjct: 238 ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A +V +RG P Y L+ C G+ G A +V D++ ++ LP+VI+ TL
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G ++R EA L+ +M + ++PD+VT+NCLL+ L GR++ L G
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
D +TY++L+ Y + + + L +++ G P++ TYN +DGL +
Sbjct: 418 PADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKS 469
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 37/351 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K + D + F M+K I P++ +YN +I+G K D+A G MV +
Sbjct: 182 INGLCKIGKTRDAIQMFPKMKK-IRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENG 240
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFDEG 279
++ DV ++N +I GFC +F A+ L EM +G P+V +FN LI G + E
Sbjct: 241 IELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEA 300
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
N+ MI+ G + V+ L++G C G V +A ++ R LP Y L+
Sbjct: 301 YNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLING 360
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---------LRKGVEASG---- 386
C A+ ++ E+ K +P + L++GL + L + + ASG
Sbjct: 361 YCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPAD 420
Query: 387 ----------------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
L + +++ GI P+ T+N LL+ LC GR A +
Sbjct: 421 LITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQ 480
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
L S KG P+ TY+I++ G +E E E L+ +M++ ++P+ T+++
Sbjct: 481 LLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 161/334 (48%), Gaps = 1/334 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ +K R N + + ++ +PS+ +++LIN F + + A +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + DV L+ G C + A+ L E ++G + V + T+I G K
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M +M ++ + + ++DGLC +G V +AC L + G+ + Y +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ C G A++++DE+ +G + P V LI+GL +L + EA ++ M+K G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD V++N L+ C G +A ++ + P+ ++Y L++GY + E
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
L+ EM ++ +PD TYN +DGLS + +S+ +
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYE 405
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y LING+ K R D+A+ M + PD VT+N L+ G ++ + L
Sbjct: 349 PNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDL 408
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
MR G +++++N L+ +F KFD+ + + +IE+G + T IL+DGLC
Sbjct: 409 VEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCK 468
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A E+ S +G P Y ++ LC EG A ++ ++ LP+ I
Sbjct: 469 SGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYIT 528
Query: 368 CTTLIEGL 375
T++ +
Sbjct: 529 FDTIVRAI 536
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 167/330 (50%), Gaps = 1/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + +F +++ L FE + K + P+V Y +LI + D A+ D M
Sbjct: 176 YNIMIGSFCSRGKLDLALEIFEELLK-DNCEPTVITYTILIEATILDGGIDVAMKLLDEM 234
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++PD +T+N +I G C+ D A L R + +GC P+++++N L+R K+
Sbjct: 235 LSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKW 294
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
EG + EMI +GC+ + VT IL+ LC +G+V +A L+ +G+ P + Y L
Sbjct: 295 SEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPL 354
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C EG +A E ++ + G LP ++ T++ GL R K +A + EK+ + G
Sbjct: 355 IAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGC 414
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ ++N L L G A + L +G+DPD +TY+ L+S R+ E
Sbjct: 415 PPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+ +M + P++ +YN + GL ++
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRA 504
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 149/303 (49%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
G+P V YN LI+GF+K + + A DRM PDVVT+NI+I FC K DLAL
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+F E+ + C P V+++ LI + D + + EM+ G E ++T ++ G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C E V KA EL+ S RG P Y L+ L G +++ E+ G P+V
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ + LI L R K EA L+ M ++G+ PD+ ++ L+ C GR A
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G PD + Y+ +++G R + + + ++ + G P++++YN+ L ++
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433
Query: 486 SVR 488
R
Sbjct: 434 RYR 436
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 6/328 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N +A + N+ L E M +D P V + LI GF R KA + + R
Sbjct: 76 LNRSCRAGKYNESLYFLECM---VDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILER 132
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
KPDV +N LISGF + + + A + M+ +G P+VV++N +I F K D
Sbjct: 133 -YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + E+++ CE + +T IL++ +G + A +L+ + +G+ P Y ++
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+C E A E++ L +G P +I L+ L K E L+ +M+ G P
Sbjct: 252 GMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKP 311
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT + L+ LC G+ +A L KGL PD Y L++G+ RE R +
Sbjct: 312 NVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFL 371
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKS 486
M+ +G +PD+ YN+ M GL K+
Sbjct: 372 EYMISDGCLPDIVNYNTIMAGLCRTGKA 399
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 141/293 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +I G K DKA + KPD++T+NIL+ K+ L
Sbjct: 241 PDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKL 300
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM GC PNVV+ + LI + K +E VN+ M E G + + + L+ G C
Sbjct: 301 ISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCR 360
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGR+ A E + G LP +Y ++ LC G A ALEV ++L + G P+V +
Sbjct: 361 EGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSS 420
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL L A ++ K+L +GI PD +T+N L+ LC G +A L +
Sbjct: 421 YNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ 480
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ P+ ++Y+I++ G + NR + ++ M ++G P+ TY ++G+
Sbjct: 481 SGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 130/288 (45%), Gaps = 2/288 (0%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE +R L +P + YN+L+ + ++ + M+ KP+VVT +ILI
Sbjct: 262 AFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIG 321
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR+ K + A+ L R M+EKG P+ ++ LI GF E + D MI GC
Sbjct: 322 TLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLP 381
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V ++ GLC G+ +A E+ G P Y L L G+ ALE++
Sbjct: 382 DIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMI 441
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+L +G P I +LI L R EA L+ M P+ V++N +L LC V
Sbjct: 442 LKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKV 501
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
R DA + + KG P+ TY +L+ G R E L N +
Sbjct: 502 NRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++ CR K++ +L M +KG P+V+ LI+GFF R + + E++E
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ L+ G ++ A ++ RG LP Y ++ C G +AL
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE-ASGLMEKMLKEGILPDSVTFNCLLED 409
E+ +EL K P+VI T LIE L G++ A L+++ML +G+ PD++T+N ++
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEA-TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+C A L S++G PD +TY+IL+ + EGE L++EM+ G P+
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312
Query: 470 LATYN 474
+ T++
Sbjct: 313 VVTHS 317
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + + + L FE + + + P+VS YN L + + +AL ++
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLDE-VGCPPNVSSYNTLFSALWSSGDRYRALEMILKL 444
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PD +T+N LIS CR+ D A+ L +M+ PNVVS+N ++ G +
Sbjct: 445 LNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRA 504
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
++ + + M E GC+ + T +L++G+ G +A EL
Sbjct: 505 NDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELA 546
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
K+ L+ + C G +L ++ + KG P VI CT LI+G R +A+ +M
Sbjct: 68 KEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM 127
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E + + G PD +N L+ + +A+R+ ++G PD +TY+I++ +
Sbjct: 128 EILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186
Query: 449 NRRKEGENLVNEMLDEGFIPDLATY 473
+ + E+L + P + TY
Sbjct: 187 GKLDLALEIFEELLKDNCEPTVITY 211
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 158/331 (47%), Gaps = 4/331 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+H ++ K ++++ L M ++ G+ PS+ Y+ L+ K R D A +D
Sbjct: 83 YHILIHGLAKIGKLDESLKILSEM--VMRGQTPSMQAYSSLVRALAKARRVDHASSLFDE 140
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R PD + F LI G C+ K A F++M + GC PNV +N L+ G +
Sbjct: 141 MIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQ 200
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + EM C VT L+D +C RV + C+L G +P +
Sbjct: 201 LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFST 260
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G ALEV + + G P+ TTLI GL R K ++A L EKM +
Sbjct: 261 LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC 320
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I PD+V +N L+ C G +A++L R ++ GL P +T++ L+ G+ + +
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA 380
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
LV EM +G D TY + GLS A K
Sbjct: 381 NELVAEMGTKGLAADSCTYRILIAGLSRATK 411
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SC ++ ++A KA R+ +G FEAMR P+V ++ LI+G + E +K
Sbjct: 215 SCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA-AGYVPNVITFSTLIHGLCRTGELEK 273
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL + M+ KP+ T+ LISG CR +K A LF +M + P+ V++N+LI
Sbjct: 274 ALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333
Query: 269 GFFGERKFDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G+ DE + EM G + + VT L+DG C G++ +A ELV + +G+
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLA 393
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
Y L+ L ALEV ++ +K L ++C + + GL + +A +
Sbjct: 394 ADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAV 453
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
E K G +P+ TF L E L +GR DA +L
Sbjct: 454 FEATRKSGAVPNPETFRILSESLIKLGRVEDAQKL 488
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 135/300 (45%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V Y+ +I VK + +++ + M+ PDV FN ++ GF R+ + A ++
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+ M E G P+ VS++ LI G K DE + + EM+ G S LV L
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
RV A L + R G P ++ L+ LC G A E ++ K G P+V
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L+ GL + +A+ L +M PD VT+N LL+ +C R + +L
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G P+ +T+ L+ G R ++ + ML+ G P+ TY + + GL A K ++
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 131/265 (49%), Gaps = 1/265 (0%)
Query: 217 VRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+RD+ + +V T++ +I + K + + + EM GCNP+V +FN +++GF
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + M+E G + +V+ IL+ GL G++ ++ +++ + RG P Y
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV L A + DE+ + G+ P + LI GL + K +AS ++M K G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ +N LL LC G+ A+ L + PD +TY+ L+ + R +EG
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L M G++P++ T+++ + GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGL 265
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
MR+K NV +++++I+ E K +E + EM+ GC ++ G
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ KA E+ G P + Y L+ L G +L+++ E+ +G PS+ A ++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ L + R+ AS L ++M++ G PD + F L+ LC G+ DA G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ Y++L+ G + ++ L EM PD+ TYN+ +D + AR+
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + K M++ + M +P++ +N LI+GF K + +A M
Sbjct: 328 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 387
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ D T+ ILI+G R K D AL ++++MREK + VS + + G
Sbjct: 388 GTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNI 447
Query: 277 DEGVNMAYEMIELGCEFSSV----TCEILVDGLCNEGRVLKACELV 318
D+ AY + E + +V T IL + L GRV A +L+
Sbjct: 448 DQ----AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 153/291 (52%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN L+ K D G Y+ M+ P+ T+ L+ C+ ++F+ A +FR M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC+PNV S++ LI G +K DE + EMI+ G + + VT L+ GLC G++
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L RG P Y L++ +G+ G A + +E+ +KG +P+V +L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G R + L + ML++G +P+ TFN LL+ C +G V+A RL L + G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD ++Y+ L+ G + + E + L+ EM+ G PD+ +YN +DG S +
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y L+ + + F++A + M P+V +++ILI+G CR +K D A L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G PNVV++ +L+ G K E V++ M+ GC V +L+DG
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A L + +G +P F Y L+ +G G + ++ ++G +P++
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++G ++ VEA L +M G PD V++N L+ +C G+ +A RL
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ PD ++Y+IL+ GY++ L E+ G PD +Y++ +D L A K
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 174/390 (44%), Gaps = 11/390 (2%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA + + H ++ +++ LA S R ++ N + A C +
Sbjct: 4 FQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNT----------Y 53
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ + + + +A R + F M P+V Y++LI G + ++ D+A +
Sbjct: 54 TYGYLLRSLCQAQRFEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNE 112
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +P+VVT+ L+SG C+ K A+ LF M +GC P+ V +N LI GF +
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EM+E GC + T L+ G +G + L D R+G +P F +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G+ A + E+ G P V++ TLI G+ K EA L+ +M++ G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSG 292
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V++N L++ G A +L GL+PD +Y ++ R +
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M+ G PD A + GL +
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGER 382
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 3/308 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
CP +++ ++ F K M + FE M L G P+V YN L++GF + EF
Sbjct: 152 GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM--LEKGCIPTVFTYNSLLSGFSRKGEFG 209
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ + M+R P++ TFN L+ GFC+ A LF EMR GC P+VVS+NTLI
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLI 269
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
RG + K E + EMI G V+ IL+DG G + A +L + + G+
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P F Y +++ LC G G A V ++ G+ P L+ GL R + E+ L
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M+K +P +N L+ LC R+ D + + +G PD +++ R
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449
Query: 448 ENRRKEGE 455
+ + E
Sbjct: 450 SDDKDAAE 457
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 192/452 (42%), Gaps = 70/452 (15%)
Query: 73 SLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHT-----------------TFLFI 115
+ + S++H++ Y++ + A S R DH T+ ++
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAK---SGRCDHVYGTYNDMLAAGCVPNTYTYGYL 58
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
+RSL + RF E SV ++A C + +FS + + + ++++
Sbjct: 59 LRSLCQAQRFEEARSVFRGMAAQGC---SPNVFS-------YSILIAGLCRGQKVDE--- 105
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++IDG +P+V Y L++G K + +A+ + RMV PD V +N+LI
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GF + A LF EM EKGC P V ++N+L+ GF + +F ++ +M+ GC
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T L+DG C G +++A L ++ G P Y L+ +C +G A ++
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ + G P +++ LI+G + A L ++ K G+ PD+ +++ +++ LC
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML----------- 462
G+ A + G PD LV G R R E L M+
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 463 ------------------------DEGFIPDL 470
+ GF PD+
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 191/422 (45%), Gaps = 56/422 (13%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++ L +R SE + F+S C D I + + +
Sbjct: 381 DIVTYSTLIKGLCMEHRISE--ATWLFMSMQKLGCRPDAI--------TYGTLMKGLCQT 430
Query: 168 NRMNDGLLAFEAM-----RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+N L + M R I +P++ Y+++I+G K R D+A ++ M +
Sbjct: 431 GNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIM 490
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV+++ LI GFC + K++ A LF EM + G P+V + + LI + K E +
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+I+ GC VTC LV GLC + R+ KA +L + + G +P L++ LC
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610
Query: 343 EGNAGIALE-------------------------VVD------------ELWKK----GN 361
GN IALE ++D EL+K+ G
Sbjct: 611 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+P VI+ T+LI G R K +A L +M+ G+ PD TF+ L++ LC G+ ++A+
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L + +G P+ +TY LV G +R E L +M G +PD+ TY + M GL
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 790
Query: 482 NA 483
Sbjct: 791 QT 792
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 182/344 (52%), Gaps = 13/344 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +R+++ F +M+KL RP Y L+ G + + AL + M
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKL-GCRPDAITYGTLMKGLCQTGNINIALQLHQEM 443
Query: 217 VRD------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ D + KP +++++I+I G C++++ D A LF EM+ +G P+V+S+ TLI GF
Sbjct: 444 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGF 503
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K+++ + EM+++G + T +L+D LC +G+V++A +L+ +RG +
Sbjct: 504 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDV 563
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
LV+ LC + A ++ ++ K G +P+V+ C TL++GL + A L +
Sbjct: 564 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 623
Query: 391 MLKE----GI--LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
ML + GI P++++++ +++ LC GR +A L G+ PD ++Y L+ G
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 683
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ R + K+ + L NEM+D G PD+ T++ +D L K +
Sbjct: 684 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 727
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 186/393 (47%), Gaps = 24/393 (6%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
S R D TT ++ L + E + +L + C I + + +
Sbjct: 49 SIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILD---IVT-------YSTLIKG 98
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD---- 219
+R+++ F +M+KL RP Y L+ G + + AL + M+ D
Sbjct: 99 LCMEHRISEATWLFMSMQKL-GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRY 157
Query: 220 --RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ KP +++++I+I G C++++ D A LF+EM+ +G P+V+S+ +LI GF K++
Sbjct: 158 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWE 217
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + EM+++G + T +L+D C EG+V++A EL+ RG + Y L+
Sbjct: 218 KAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLI 277
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG-- 395
+ LC + A ++ + K G P IA TL++GL + K A L ++ML +
Sbjct: 278 KGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQ 337
Query: 396 -----ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
I PD T + L++ LC G+ ++A+ L + +G D +TY L+ G E+R
Sbjct: 338 YGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 397
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E L M G PD TY + M GL
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQT 430
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 185/384 (48%), Gaps = 23/384 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TT ++ L + E + +L + C + +C + V
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD---VVTCTTL-------VKGLCMK 576
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD------RV 221
+R++ F M+KL P+V L+ G + AL + M+ D
Sbjct: 577 HRISKATQLFLKMQKL-GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
KP+ ++++I+I G C+ + D A LF+EM+ G P+V+S+ +LI GF K+ +
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ EM+++G + T +L+D LC EG+V++A EL+ +RG +P Y LV+ LC
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE------G 395
A ++ ++ K G LP V+ TL++GL + A L +KML +
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD ++++ +++ LC GR +A L G+ P+ ++Y L+ G+ R + ++ +
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L NEM+D+G + TY+ + G
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHG 899
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 165/340 (48%), Gaps = 14/340 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +R+++ F +M+KL RP Y L+ G + + + AL + M
Sbjct: 273 YSTLIKGLCMKHRISEATQLFMSMKKL-GCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331
Query: 217 VRDR-------VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ D ++PDV T ++LI C+ K A L M ++GC ++V+++TLI+G
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC----ELVIDFSRRG 325
E + E + M +LGC ++T L+ GLC G + A E++ D R G
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451
Query: 326 V--LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P Y +++ LC + A E+ +E+ +G +P VI+ TTLI G K +
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L +ML GI PD T + L++ LC G+ ++A++L + +G D +T LV
Sbjct: 512 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVK 571
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G ++R + L +M G +P++ T + M GL +
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 611
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 6/273 (2%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I+ +P+ Y+++I+G KC D+A + M V PDV+++ LI GFCR+ K+
Sbjct: 633 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 692
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A LF EM + G P+V +F+ LI E K E + MI+ GC ++VT LV
Sbjct: 693 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 752
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL- 362
GLC R+ +A +L + + G LP Y L++ LC GN ALE+ ++
Sbjct: 753 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812
Query: 363 -----PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P VI+ + +I+GL + + EA L ++M G++P+ +++ L+ C G+
Sbjct: 813 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
DA L +G+ + +TY +++ G+ +E +
Sbjct: 873 DAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 905
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 188/472 (39%), Gaps = 98/472 (20%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++ L +R SE + F+S C D I + + +
Sbjct: 88 DIVTYSTLIKGLCMEHRISE--ATWLFMSMQKLGCRPDAI--------TYGTLMKGLCQT 137
Query: 168 NRMNDGLLAFEAM-----RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+N L + M R I +P++ Y+++I+G K R D+A + M +
Sbjct: 138 GNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMM 197
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV+++ LI GFC + K++ A LF EM + G P+V + LI F E K E +
Sbjct: 198 PDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANEL 257
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ GC VT L+ GLC + R+ +A +L + + G P Y L++ LC
Sbjct: 258 LEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ 317
Query: 343 EGNAGIAL------------------------------------------EVVDELWKKG 360
G IAL E+++ + ++G
Sbjct: 318 TGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 377
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG------ 414
+ ++ +TLI+GL + EA+ L M K G PD++T+ L++ LC G
Sbjct: 378 CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL 437
Query: 415 -----------------------------------RTVDADRLRLLASTKGLDPDGMTYH 439
R +A L +G+ PD ++Y
Sbjct: 438 QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYT 497
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ G+ + ++ + L NEMLD G PD+ T + +D L K + +
Sbjct: 498 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 549
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 174/411 (42%), Gaps = 83/411 (20%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ K R ++ FE M K P V Y LI+GF +++KA ++ M
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEM-KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++PDV T ++LI C+ K A L + ++GC +VV+ TL++G + +
Sbjct: 520 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI 579
Query: 277 DEGVNMAYEMIELGCEFSSVTC-------------------------------------- 298
+ + +M +LGC + VTC
Sbjct: 580 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 639
Query: 299 ---EILVDGLCNEGRVLKACELVIDFSRRGVLP------------------KDFDYF--- 334
I++DGLC GR +A EL + GV+P KD Y
Sbjct: 640 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699
Query: 335 --------------GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
L++ LC EG A E+++ + ++G +P+ + TTL++GL +
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLAST----KGLDPD 434
EA+ L KM K G LPD VT+ L++ LC G A L ++L+ T PD
Sbjct: 760 ISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPD 819
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++Y I++ G + R E L EM G IP++ +Y S + G + K
Sbjct: 820 VISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 870
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 146/313 (46%), Gaps = 15/313 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKAL---------GFYDRMVRDRVKPDVVTFNILISGFCRN 238
P +N+LIN + ++ L G+ +V ++PDV T ++LI C+
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
K A L M ++GC ++V+++TLI+G E + E + M +LGC ++T
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 299 EILVDGLCNEGRVLKAC----ELVIDFSRRGVL--PKDFDYFGLVEKLCGEGNAGIALEV 352
L+ GLC G + A E++ D R G+ P Y +++ LC + A E+
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ +G +P VI+ T+LI G K +A L +ML GI PD T L++ C
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+ ++A+ L + +G D +TY L+ G ++R E L M G PD
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307
Query: 473 YNSYMDGLSNARK 485
Y + M GL K
Sbjct: 308 YGTLMKGLCQTGK 320
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 21/353 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEA-MRK-------LIDGRPSVSIYNVLINGFVKCREFDK 208
F+ +N R+N+GL A MR+ RP V+ ++LI+ K + +
Sbjct: 13 FNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIE 72
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M++ D+VT++ LI G C + A LF M++ GC P+ +++ TL++
Sbjct: 73 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 132
Query: 269 GFFGERKFDEGVNMAYEMIE------LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
G + + + EM+ + C+ + ++ I++DGLC + R +A EL +
Sbjct: 133 GLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 192
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G++P Y L+ C G A + +E+ G P V LI+ + K +
Sbjct: 193 AQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVI 252
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA+ L+E M+ G + D VT++ L++ LC R +A +L + G PD + Y L+
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312
Query: 443 SGYTRENRRKEGENLVNEMLDEG-------FIPDLATYNSYMDGLSNARKSVR 488
G + + +L EML++ PD+ T + +D L K +
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIE 365
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ K R ++ F+ M+ L P V Y LI+GF + ++ A ++ M
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKAL-GVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+PDV TF++LI C+ K A L M ++GC PN V++ TL++G +
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL----VIDFSRRGV--LPKD 330
E + +M +LGC VT L+ GLC G + A EL + D + G P
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +++ LC G A E+ E+ G +P+VI+ T+LI G R K +A L +
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGR 415
M+ +G+ ++VT++ ++ C G+
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQ 905
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TTF ++ L + E + +L + C P + V
Sbjct: 708 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI---------PN-TVTYTTLVKGLCMN 757
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD------RV 221
+R+++ F M+KL P V Y L+ G + AL + +M+ D
Sbjct: 758 DRISEATQLFMKMQKL-GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
KPDV++++I+I G C++ + D A LF+EM+ G PNV+S+ +LI GF K ++ +
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 876
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+ EM++ G + ++VT +++ G C EG++ KA
Sbjct: 877 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 121/291 (41%), Gaps = 50/291 (17%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGV------------------------------ 280
MR G P+ +FN LI ++ +EG+
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 281 --------------NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ MI+ GC VT L+ GLC E R+ +A L + + G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN------LPSVIACTTLIEGLRRLRK 380
P Y L++ LC GN IAL++ E+ P++I+ + +I+GL + R+
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA L ++M +G++PD +++ L+ C G+ A L G+ PD T +
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ + +E + E L+ M+ G I D+ TY++ + GL + T+
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQ 291
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y+++I+G K D+A + M V P+V+++ LI GFCR+ K + A
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 876
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
LF EM ++G N V+++ +I GF E + D+ +
Sbjct: 877 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 219/504 (43%), Gaps = 50/504 (9%)
Query: 18 PPPPPAPSI-PLPSRPETPPVTLPSVTLT-------PTAHHTHLLRF---LKTHLLTPTN 66
P P P++ PL + T P ++P + T P A + + F L L
Sbjct: 8 PSPSFKPNLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHHPLSLFLRNCKT 67
Query: 67 NQITPSSLLHFLKSKLHHHP---------------QFTHYDFHIFAWAST--IDSFRHDH 109
IT HF + HP + HY +F+ + + D
Sbjct: 68 GNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYS-QLFSLYNEMRLAGLSPDL 126
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA--VNAFVKA 167
T + L + R SE + + GI + + + +
Sbjct: 127 FTLSILANCLCNVNRVSEALAAM------------AGILRRGYIPNVVTYTTLIKGLCME 174
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD------RV 221
+R+++ F M+KL P+ Y LI G + + AL + M+ D
Sbjct: 175 HRISEATRLFLRMQKL-GCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNC 233
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
KP V+T++I+I G C+ + D A LF EM+ +G P+V+S++TLI GF K+D+ +
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKH 293
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ EM++ G + VT +L+D LC EG+V +A +L+ +RG++P Y L++ C
Sbjct: 294 LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ A E+ + KG P I+ TTLI G + K EA L +ML+ G P+
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+ LL+ L G+ DA +L + T G+ + Y I + G + + E L NE+
Sbjct: 414 TYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNEL 473
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
F ++ Y+ +DGL A K
Sbjct: 474 KSYNFKLNIENYSCLIDGLCKAGK 497
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 164/365 (44%), Gaps = 38/365 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K R ++ FE M+ G P V Y+ LI+GF ++D++ +D
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKA--QGMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297
Query: 216 MVRDRVKPDVVTFNILIS-----------------------------------GFCRNKK 240
MV V+PD+VTF++LI GFC
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+ A LF M KG P+ +S+ TLI G+ K E +N+ EM+++G + T
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+ GL +G+V A +L GV Y ++ LC A+E+ +EL
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
++ + LI+GL + K A L EK+ +EG+ PD VT+N ++ C VG+ +A+
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L G PD + Y+ L+ G+ N+ +E L+++M+ + P+ A+ +D L
Sbjct: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597
Query: 481 SNARK 485
K
Sbjct: 598 CKDEK 602
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 145/304 (47%), Gaps = 5/304 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ K ++ + E M R ++ P++ YN LI+GF + + A +
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRGIV---PNLITYNSLIDGFCMVGDLNSARELFL 366
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++PD +++ LI+G+C+ K A+ L+ EM + G +PNV ++ TL++G F +
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG 426
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + + M G +S I +DGLC + +A EL + +Y
Sbjct: 427 KVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYS 486
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A E+ ++L ++G P V+ +I G ++ + A+ L EKM +
Sbjct: 487 CLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEEN 546
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD + +N LL C+ + + +L K + P+ + I+V ++ + K+
Sbjct: 547 GCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKF 606
Query: 455 ENLV 458
+L+
Sbjct: 607 VDLL 610
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 171 NDGLLAFEAMR-----KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
ND L FEAM K + + ++ Y+ LI+G K + + A ++++ ++ ++PDV
Sbjct: 460 NDCL--FEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDV 517
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+NI+I GFC+ + D A LF +M E GC P+++++NTL+ GF K +E + + ++
Sbjct: 518 VTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHK 577
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
M++ ++ +C I+VD LC + + K +L+ F
Sbjct: 578 MVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 375 LRRLRKG----VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LR + G ++A + M++ +P +FN LL L + L G
Sbjct: 62 LRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAG 121
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
L PD T IL + NR E + +L G+IP++ TY + + GL + T
Sbjct: 122 LSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEAT 181
Query: 491 R 491
R
Sbjct: 182 R 182
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 170/330 (51%), Gaps = 6/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NA+ K+ + + L + P+ + Y+ ++ + +A+ DR
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTSV----APNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + PDVVT +LI C+ A+ LF EMR KGC P+VV++N LI+GF E +
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + ++ GC+ ++ +++ LC+ GR + A +L+ R+G P + L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE-ASGLMEKMLKEG 395
+ LC +G G AL V++ + K G+ P+ + LI+G RKG++ A +E M+ G
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN-RKGIDRAIEHLEIMVSRG 376
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N LL LC G+ DA + S+KG P ++Y+ ++ G + + +
Sbjct: 377 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 436
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM +G PDL T S + GLS K
Sbjct: 437 ELLEEMCYKGLKPDLITCTSVVGGLSREGK 466
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 157/342 (45%), Gaps = 36/342 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++A K + + + F MR +P V YNVLI GF K D+A+ F ++
Sbjct: 213 IDATCKESGVGQAMKLFNEMRGK-GCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI-----RGFFGE-- 273
+ DV++ N+++ C ++ A+ L M KGC P+VV+FN LI +G G+
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331
Query: 274 ---------------RKFD---------EGVNMAYEMIEL----GCEFSSVTCEILVDGL 305
R F+ +G++ A E +E+ GC VT IL+ L
Sbjct: 332 NVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTAL 391
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C +G+V A ++ S +G P Y +++ L G A +A+E+++E+ KG P +
Sbjct: 392 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 451
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I CT+++ GL R K EA + GI P++ +N ++ LC +T A +
Sbjct: 452 ITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVD 511
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G P +Y L+ G T E +E L NE+ G +
Sbjct: 512 MVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 146/299 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V VLI+ K +A+ ++ M KPDVVT+N+LI GFC+ + D A+
Sbjct: 204 PDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIF 263
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+++ GC +V+S N ++R ++ + + + M+ GC S VT IL++ LC
Sbjct: 264 LKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQ 323
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + KA ++ + G P + L++ C A+E ++ + +G P ++
Sbjct: 324 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVT 383
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ L + K +A ++ ++ +G P +++N +++ L VG+ A L
Sbjct: 384 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 443
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL PD +T +V G +RE + E + + G P+ YNS M GL A+++
Sbjct: 444 YKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQT 502
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 11/296 (3%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D + I+RSL S R+ + +L + C P + F+ +N
Sbjct: 273 QSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF---------PSV-VTFNILINFLC 322
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ + L E M K P+ +N LI GF + D+A+ + MV PD+
Sbjct: 323 QKGLLGKALNVLEMMPKH-GHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDI 381
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+NIL++ C++ K D A+ + ++ KGC+P+++S+NT+I G K + V + E
Sbjct: 382 VTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEE 441
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M G + +TC +V GL EG+V +A + G+ P F Y ++ LC
Sbjct: 442 MCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQ 501
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
+A++ + ++ G P+ + TTLI+G+ EAS L ++ G++ S+
Sbjct: 502 TSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSL 557
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 4/283 (1%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E ++ F + M PDVV LI FC+ + A + + E G + S+N
Sbjct: 84 ELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYN 143
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI + + +E + + + ++ T + ++ LC+ G++ +A +++ +
Sbjct: 144 VLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQS 200
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
P L++ C E G A+++ +E+ KG P V+ LI+G + + EA
Sbjct: 201 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEA 260
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++K+ G D ++ N +L LC GR +DA +L KG P +T++IL++
Sbjct: 261 IIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINF 320
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
++ + N++ M G P+ ++N + G N RK +
Sbjct: 321 LCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN-RKGI 362
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 3/238 (1%)
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
RN + + M KG P+VV+ LIR F + + + E G +
Sbjct: 81 RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+ +L++ C G + +A V+D + V P Y ++ LC G A++V+D
Sbjct: 141 SYNVLINAYCKSGEIEEALR-VLDHTS--VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ P V+ CT LI+ + +A L +M +G PD VT+N L++ C GR
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+A + G D +++++++ R + L+ ML +G P + T+N
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 376 RRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
R +R G E S +E M +G +PD V L+ + C +GRT +A R+ + G
Sbjct: 78 RLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVI 137
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
D +Y++L++ Y + +E +++ P+ ATY++ + L + R ++Q
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCD-RGKLKQA 190
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 166/318 (52%), Gaps = 2/318 (0%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E +R + + +P+V Y +L++GF K + D+A + M D +KP+ V FN LI
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
S FC+ + A+ +FREM KGC P+V +FN+LI G + + + +MI G
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 520
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++VT L++ G + +A +LV + +G L + Y L++ LC G A +
Sbjct: 521 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSL 580
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++ + G +PS I+C LI GL R EA ++M+ G PD VTFN L+ LC
Sbjct: 581 FEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 640
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR D + +G+ PD +TY+ L+S + + L++E +++GF+P+ T
Sbjct: 641 AGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRT 700
Query: 473 YNSYMDGLSNARKSVRQT 490
++ + L R+T
Sbjct: 701 WSILLQSLVPQETLDRRT 718
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 155/325 (47%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ ++ FV R++D M P V YN LI G+ K AL
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M KP+V ++ IL+ GFC+ K D A L EM G PN V FN LI F E +
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + EM GC+ T L+ GLC + A L+ D GV+ Y
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ G A ++V+E+ +G+L I +LI+GL R + +A L EKML++G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++P S++ N L+ LC G +A + +G PD +T++ L++G R R ++G
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ EG PD TYN+ M L
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWL 673
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 6/328 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +N K R++ F + K P+ I+N LI+GFV D A M
Sbjct: 319 YGYLMNGLCKIGRVDAAKDLFYRIPK-----PTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373
Query: 217 VRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
V + PDV T+N LI G+ + LAL + R+MR KGC PNV S+ L+ GF K
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE N+ EM G + ++V L+ C E R+ +A E+ + R+G P + +
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC AL ++ ++ +G + + + TLI R + EA L+ +M+ +G
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
L D +T+N L++ LC G A L GL P ++ +IL++G R +E
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
EM+ G PD+ T+NS ++GL A
Sbjct: 614 EFQKEMVLRGSTPDIVTFNSLINGLCRA 641
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 135/288 (46%), Gaps = 3/288 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ V+ F K ++++ M DG +P+ +N LI+ F K +A+ +
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSA--DGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 478
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R KPDV TFN LISG C + AL L R+M +G N V++NTLI F +
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EM+ G +T L+ GLC G V KA L R G++P
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G A+E E+ +G+ P ++ +LI GL R + + + K+ EG
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
I PD+VT+N L+ LC G DA L G P+ T+ IL+
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQ 706
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 173/409 (42%), Gaps = 20/409 (4%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
++ITP F KL P +F+W + +RH + ++ L S+ F
Sbjct: 68 HKITP-----FQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFK 122
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
+ +L ++GI E +F + + KA MR +
Sbjct: 123 TIDRLL-------MQMKDEGIVF---KESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSC 172
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ YNV++ V A + M+ ++ P + TF +++ C + D AL
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ R+M + GC PN V + TLI + +E + + EM +GC + T ++ GLC
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R+ +A ++V RG P D Y L+ LC G A ++ + K P+ +
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSV 348
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
TLI G + +A ++ M+ GI+PD T+N L+ G A +
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
KG P+ +Y ILV G+ + + E NL+NEM +G P+ +N
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFN 457
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 146/301 (48%), Gaps = 13/301 (4%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
++ +V + E +++LN +SA+ + G F+ ++AF K +R+
Sbjct: 420 SYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG----------FNCLISAFCKEHRI 469
Query: 171 NDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + F M RK +P V +N LI+G + E AL M+ + V + VT+N
Sbjct: 470 PEAVEIFREMPRK--GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI+ F R + A L EM +G + +++N+LI+G + D+ ++ +M+
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G SS++C IL++GLC G V +A E + RG P + L+ LC G
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + +L +G P + TL+ L + +A L+++ +++G +P+ T++ LL+
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQS 707
Query: 410 L 410
L
Sbjct: 708 L 708
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+ +LI N +F L +M+++G F +++R + + + EM
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 166
Query: 287 IEL-GCE--FSS--VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ CE F S V EILV G C++ A + D R + P F + +++ LC
Sbjct: 167 RNVYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKALC 222
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
AL V + M K G +P+SV
Sbjct: 223 AVNEVDSALSV-----------------------------------LRDMTKHGCVPNSV 247
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ L+ L R +A +L G PD T++ ++ G + +R E +VN M
Sbjct: 248 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 307
Query: 462 LDEGFIPDLATYNSYMDGL 480
L GF PD TY M+GL
Sbjct: 308 LIRGFTPDDITYGYLMNGL 326
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N ++ + + + F+ L P + +N LING + + L + ++ +
Sbjct: 600 INGLCRSGMVEEAV-EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD VT+N L+S C+ A L E E G PN +++ L++ + D
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 4/310 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREF--DKALGFYDRMVRDRVKPDVVTFNILISGF 235
EA I +P+VS+YN LINGF CRE+ + +MV + P+V+T++ +IS
Sbjct: 237 EARELSIRFQPNVSVYNALINGF--CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
+LAL ++ +M +GC+PNV +F +L++G+F + E +N+ M E G E +
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
V L+ GLC+ G++ +A + R G P Y L++ G+ A E+ ++
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNK 414
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ G +P+V+ T+++ L R +A L+EKM + P++VTFN ++ LC GR
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR 474
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L G P+ TY+ ++ G +ENR KE LV EM ++G +L TYN+
Sbjct: 475 VECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNT 534
Query: 476 YMDGLSNARK 485
G N K
Sbjct: 535 IFGGFCNVGK 544
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 170/379 (44%), Gaps = 20/379 (5%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
+F+H T+ ++ L + +L + CS D +F +N
Sbjct: 74 AFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSED----------LFINVINT 123
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
+ + L F +R+ +P+V IYN L++ + F Y M RD +P
Sbjct: 124 YRRVGLAEQALKMFYRIREF-GCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEP 182
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+V T+NIL+ C+N + D A L EM KGC P+VVS+ T+I K +E
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR--- 239
Query: 284 YEMIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
EL F + L++G C E +V + L+ +G+ P Y ++ L
Sbjct: 240 ----ELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLS 295
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G GN +AL V +++ +G P+V T+L++G + +EA + +M +EG P+ V
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N L+ LC G+ +A + G P+ TY L+ G+ + + N+M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415
Query: 462 LDEGFIPDLATYNSYMDGL 480
+ G IP++ Y S ++ L
Sbjct: 416 MTNGCIPNVVVYTSMVNVL 434
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 3/299 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V YN LI+G + +A+ +M R+ P+V T+ LI GF + A
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASE 410
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ +M GC PNVV + +++ F + ++ +M C ++VT + GLC
Sbjct: 411 IWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLC 470
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GRV A L + G P Y +++ L E ALE+V E+ +KG +++
Sbjct: 471 CSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLV 530
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RL 424
T+ G + K EA L+ KML G+ PD++T+N L C G+ A +L +L
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
A K + P+ Y L+ G + +E +++ML+EG + AT+N+ + GL N+
Sbjct: 591 SAGGKWV-PEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + A K N+ + + F M L S + +LI+ F +C F AL +M
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYS-FTILIHCFCRCSRFSLALALLGKM 676
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +P +VT L++GFC+ +F A+ L M E G PNVV +NT+I G R
Sbjct: 677 MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDL 736
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + Y M + G +VT L+ GLCN GR A L+ D +R + P + L
Sbjct: 737 NNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 796
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EGN A + E+ ++ P+++ +LI G + +A + + M+ +G
Sbjct: 797 IDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGC 856
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+ C R D +L + +GL D TY+ L+ GY + + +
Sbjct: 857 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQK 916
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ N M+D G PD+ TYN +D L N K
Sbjct: 917 VFNRMVDCGVPPDIVTYNILLDCLCNNGK 945
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 2/312 (0%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF +++ RP SI + ++ K +FD + + +M + D+ +F ILI
Sbjct: 599 AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FCR +F LAL L +M + G P++V+ +L+ GF +F E V++ M ELG E
Sbjct: 659 CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V +++GLC + A E+ ++G++ Y L+ LC G A ++
Sbjct: 719 NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ K+ P+VI T LI+ + +EA L ++M++ + P+ +T+N L+ C
Sbjct: 779 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQ 838
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR DA + L +KG PD +TY+ L++G+ + R ++G L EM +G + D TY
Sbjct: 839 GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTY 898
Query: 474 NSYMDGLSNARK 485
N+ + G A K
Sbjct: 899 NTLIHGYCQAGK 910
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 2/324 (0%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F+ + R D L F M + PSV + L+ R ++ + F +M +
Sbjct: 39 GFLHSIRFEDALDLFLEMVQ-SQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGIS 97
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D+ +F ILI FCR + LAL + +M + G +P++V+F +L+ GF + + ++
Sbjct: 98 HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLVEKLC 341
M++ G E + V L+D LC G V A EL+ + ++G L D Y L+ LC
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A ++ ++ K+ P V T LI+ + EA L ++ML+ I P++V
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTV 277
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N L+ LC GR A + L ++KG P+ +TY+ L++G+ + R ++G L M
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
EG + D TYN+ + G K
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGK 361
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + NR + + ++M +L P+V IYN +ING K R+ + AL + M +
Sbjct: 692 LNGFCQGNRFQEAVSLVDSMAEL-GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ D VT+N LISG C + ++ A L R+M ++ +PNV+ F LI F E E
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EMI + +T L++G C +GR+ A + +G P Y L+
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +++ E+ +G + TLI G + K A + +M+ G+ PD
Sbjct: 871 CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N LL+ LC+ G+ A + +D D +TY+I++ G R ++ KE L
Sbjct: 931 VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRS 990
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G D Y + + GL
Sbjct: 991 LTRKGVKLDAIAYITMISGL 1010
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 144/283 (50%)
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
C +FD A G + M++ R P +V F +++ + KFD+ + LF +M G + ++ S
Sbjct: 593 CIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYS 652
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
F LI F +F + + +M++LG + S VT L++G C R +A LV +
Sbjct: 653 FTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA 712
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G+ P Y ++ LC + ALE+ + KKG + + TLI GL +
Sbjct: 713 ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWT 772
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ L+ M+K I P+ + F L++ G ++A L + + P+ +TY+ L+
Sbjct: 773 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ + R + +++ + M+ +G PD+ TYN+ + G +++
Sbjct: 833 NGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 1/313 (0%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R + ++ F +L + + +LI+ F +C AL +M++ P +VTF
Sbjct: 79 RRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTF 138
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
L+ GFC + A L M + G PNVV +NTLI + + + EM +
Sbjct: 139 GSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK 198
Query: 289 LG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G VT L+ GLC G +A ++ D ++R + P F + L++ +GN
Sbjct: 199 KGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLD 258
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A E+ ++ + P+ + +LI GL + A + M +G P+ VT+N L+
Sbjct: 259 EAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLI 318
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C R D +L +GL D TY+ L+ GY + + + +++ + M+ G
Sbjct: 319 NGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVT 378
Query: 468 PDLATYNSYMDGL 480
PD+ T+ + GL
Sbjct: 379 PDIITHCILLHGL 391
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 154/348 (44%), Gaps = 21/348 (6%)
Query: 91 YDFHIFAWASTIDSF---RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI 147
YD I + S + F H F + + S Y +V+ + + C C N +
Sbjct: 131 YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE----PNVVVYNTLIDCLCKNGDV 186
Query: 148 FSC----PEMERIFHFAVNAFVKANRMNDGLL-------AFEAMRKLIDGR--PSVSIYN 194
EME+ A + V N + GL A +R + R P V +
Sbjct: 187 NIALELLNEMEKKGRLAAD-LVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFT 245
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
LI+ FVK D+A Y +M++ + P+ VT+N LI+G C + + A F M K
Sbjct: 246 ALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK 305
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
GC PNVV++NTLI GF R+ ++G+ + M G + T L+ G C G++ A
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVA 365
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ GV P + L+ LC G G A+ +++ ++A +I G
Sbjct: 366 KDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L + K EA L ++ EG+ PD+ T+ ++ LC G +AD L
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 154/360 (42%), Gaps = 37/360 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ F + +R++ L M KL PS+ + L++GF A M
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKL-GYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERK 275
V+ +P+VV +N LI C+N ++AL L EM +KG ++V++NTL+ G +
Sbjct: 162 VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGE 221
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + + +M + T L+D +G + +A EL + + P Y
Sbjct: 222 WRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNS 281
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G A + D + KG P+V+ TLI G + R+ + L ++M +EG
Sbjct: 282 LINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREG 341
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT------------------ 437
++ D+ T+N L+ C VG+ A + + G+ PD +T
Sbjct: 342 LVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAM 401
Query: 438 -----------------YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+I++ G + ++ +E L + EG PD TY + GL
Sbjct: 402 VKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGL 461
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 150/347 (43%), Gaps = 37/347 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ F NR++D +M K P+V +YN LI+ K + + AL + M
Sbjct: 138 FGSLLHGFCLRNRIHDAFSLVASMVK-SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM 196
Query: 217 VRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ R+ D+VT+N L++G C + ++ A + R+M ++ NP+V +F LI F +
Sbjct: 197 EKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGN 256
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + +M++ ++VT L++GLC GR+ A + + +G P Y
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNT 316
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C +++ ++++G + TLI G ++ K A + M+ G
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376
Query: 396 ILPDSVT-----------------------------------FNCLLEDLCDVGRTVDAD 420
+ PD +T +N ++ LC + +A
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L +G+ PD TY I++ G + R+E + L M ++G I
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 3/254 (1%)
Query: 157 FHFAVNAFVK-ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ FVK N + L E +R+ + P++ YN LINGF A +D
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSV--HPNILTYNSLINGFCIQGRLGDAKHMFDL 850
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV PDVVT+N LI+GFC++K+ + + LF EM +G + ++NTLI G+ K
Sbjct: 851 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M++ G VT IL+D LCN G++ KA +V D + + Y
Sbjct: 911 LNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNI 970
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ +C A + L +KG IA T+I GL R EA L +M ++G
Sbjct: 971 IIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030
Query: 396 ILPDSVTFNCLLED 409
+P ++ L D
Sbjct: 1031 FMPSERIYDETLRD 1044
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN++I G + + +A + + R VK D + + +ISG CRN A L M+
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Query: 253 EKGCNPNVVSFNTLIRGFF 271
E G P+ ++ +R +
Sbjct: 1028 EDGFMPSERIYDETLRDHY 1046
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 155/292 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY +LI+GF + AL D M+ DVVT+N ++G C+ K F A L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P+ +F TLIRG+ + D+ +N+ M+ + VT L+DG C
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A EL D R+ ++P Y ++ C G AL + D++ +KG P+++
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C TLI+G R +A + KM+ GI+PDS ++N L++ A L
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+GL + +TY+++++G+ E + +E E ++ +M++ G PD ATY+S ++G
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 2/311 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA+E +++ G +++Y N+++N K R+F+ + F M V D+VT+N LI
Sbjct: 240 LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+ +CR + A L +G P ++++N ++ G K+D ++ EM++LG
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++ T L+ +C +L+A E+ + SRRGVLP + L+ L G+ AL
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ + G +P + T LI+G R +A + ++ML G D VT+N L LC
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
DAD L +G+ PD T+ L+ GY ++ + NL M+ PD T
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539
Query: 473 YNSYMDGLSNA 483
YN+ +DG A
Sbjct: 540 YNTLIDGFCKA 550
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 194/405 (47%), Gaps = 11/405 (2%)
Query: 75 LHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNF 134
L F+ +H P F H + A + R I+R + S S + V +
Sbjct: 118 LKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKS-GVSRVKVVESL 176
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
IS F + I+ V +V+A ++ +G AF+ +R+ S++ N
Sbjct: 177 IST---------CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRK-GVSVSINACN 226
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
L+ G V+ D A Y +VR ++ +V T NI+++ C+++KF+ + +M K
Sbjct: 227 KLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK 286
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G ++V++NTLI + E +E + G E +T ++ GLC G+ +A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+++I+ + G+ P Y L+ ++C N A E+ DE+ ++G LP +++ ++LI
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L R +A +M + GI+PD+V + L++ C G DA ++R +G D
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY+ ++G ++ + + L NEM++ G +PD T+ + + G
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YN L+ + +A +D M R V PD+V+F+ LI RN AL
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FREM G P+ V + LI GF + + M EM+ GC VT ++GLC
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ A L + RG++P + + L+ C +GN AL + + + + P +
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L + M+++ I+PD +++ +L C G +A L
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P+ +T + L+ GY R + +++M+ G IPD +YN+ +DG
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N K D + F M R ++ P + LI G+ K DKAL ++ MVR
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMV---PDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD VT+N LI GFC+ + A L+ +M K P+ +S+ T++ GF E
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+N+ +M+E G + VTC L+ G C G + KA E + G++P F Y L++
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
E N A +++E+ K+G ++I ++ G K EA ++ KM++ GI P
Sbjct: 651 GYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D G TY L++G+ ++ KE
Sbjct: 711 D-----------------------------------GATYSSLINGHVSQDNMKEAFRFH 735
Query: 459 NEMLDEGFIPD 469
+EML G +PD
Sbjct: 736 DEMLQRGLVPD 746
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ N LI G+ + + KA + +M+ + + PD ++N LI G+ + + A
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM ++G N++++N ++ GF E K E + +MIE+G T L++G
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723
Query: 307 NEGRVLKACELVIDFSRRGVLPKD 330
++ + +A + +RG++P D
Sbjct: 724 SQDNMKEAFRFHDEMLQRGLVPDD 747
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%)
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E L +KG S+ AC L+ GL R A + ++++ GI + T N ++ L
Sbjct: 208 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNAL 267
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C + + KG+ D +TY+ L++ Y RE +E L+N G P L
Sbjct: 268 CKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327
Query: 471 ATYNSYMDGLSNARKSVR 488
TYN+ + GL K R
Sbjct: 328 LTYNAILYGLCKIGKYDR 345
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 195/427 (45%), Gaps = 55/427 (12%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASS---YRFSELHSVLNFISANPCPCSNDGIFS 149
F WA D ++HD ++ ++ L S +R +++ L +P +
Sbjct: 11 IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVT------ 64
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFD 207
F + KA + + A E +R L P V I+NVLI+G K D
Sbjct: 65 -------FKILIRGNCKAGQ---AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPD 114
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVSFNT 265
+A+ ++ M RVKP++VT+N +ISG C++ + A L EM KG P++V++NT
Sbjct: 115 QAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNT 174
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI F+ + E +M G +TC ILV G+C +G V +A E++ G
Sbjct: 175 LINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAG 234
Query: 326 VLPKDFDYFGLVEKLCGEG-----------------------------NAGI---ALEVV 353
+P Y ++ LC G AG+ ALEV+
Sbjct: 235 PVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL 294
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+E+ ++ LP VI T L+ GL R+ + A L+E+++++G +PD + + L++ LC
Sbjct: 295 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 354
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G +A +L S +G + Y LVSGY R + ++ EM+ +P L TY
Sbjct: 355 GEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTY 414
Query: 474 NSYMDGL 480
N + GL
Sbjct: 415 NIVLGGL 421
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%)
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
K + P + +N L++GF K +AL + M R+ + PDV+T+ IL++G CR +
Sbjct: 263 KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV 322
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+A L E+ +G P+V+++ +L+ G + +E + EM GC V L
Sbjct: 323 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
V G C G V KA E++ + ++P F Y ++ L +G+ A+ ++ +L +G
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+P V+ TLI+GL + + EA L ++M G P+ VT ++ LC VGR DA
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L + S K P+ + Y L+ G + +R + +++ M +G D Y + +S
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562
Query: 482 NARK 485
+ +
Sbjct: 563 HGGR 566
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NAF +A+R+ + AF K P V N+L++G K + ++AL D M
Sbjct: 172 YNTLINAFYRASRIREAC-AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM 230
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PDV+T+N +I C K A + + M C+P++V+FNTL+ GF
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGML 287
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM +T ILV+GLC G+V A L+ + R+G +P Y L
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC G A ++V E+ +G V+ ++L+ G R +A ++ +M+ +
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P T+N +L L G A L +G PD +TY+ L+ G + NR +E +
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L +EM G P+ T S + GL
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGL 491
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R V +Y+ L++G+ + KA MV + P + T+NI++ G ++ A+
Sbjct: 373 RTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 432
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L ++ +G P+VV++NTLI G + E ++A EM GC + VT +V GLC
Sbjct: 433 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLC 492
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GRV A LV++ SR+ P Y L++ LC A V+D + +G
Sbjct: 493 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDF 552
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A LI + + EA + ++M+ G LPD T L E
Sbjct: 553 AYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 3/254 (1%)
Query: 237 RNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
R+ + DLA+ F E+ G +V S+N L+ + +++ GC +
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT +IL+ G C G+ ++A E + V P + + L+ L +GN A+++ +
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG--ILPDSVTFNCLLEDLCDV 413
+ P ++ T+I GL + +A L+E+M+++G PD VT+N L+
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R +A R G++PD +T +ILVSG ++ +E +++ M G +PD+ TY
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 474 NSYMDGLSNARKSV 487
NS + L A K V
Sbjct: 243 NSIIHALCVAGKVV 256
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 155/292 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY +LI+GF + AL D M+ DVVT+N ++G C+ K F A L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P+ +F TLIRG+ + D+ +N+ M+ + VT L+DG C
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A EL D R+ ++P Y ++ C G AL + D++ +KG P+++
Sbjct: 550 AGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C TLI+G R +A + KM+ GI+PDS ++N L++ A L
Sbjct: 610 CNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME 669
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+GL + +TY+++++G+ E + +E E ++ +M++ G PD ATY+S ++G
Sbjct: 670 KRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 2/311 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA+E +++ G +++Y N+++N K R+F+ + F M V D+VT+N LI
Sbjct: 240 LAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+ +CR + A L +G P ++++N ++ G K+D ++ EM++LG
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++ T L+ +C +L+A E+ + SRRGVLP + L+ L G+ AL
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ + G +P + T LI+G R +A + ++ML G D VT+N L LC
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
DAD L +G+ PD T+ L+ GY ++ + NL M+ PD T
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539
Query: 473 YNSYMDGLSNA 483
YN+ +DG A
Sbjct: 540 YNTLIDGFCKA 550
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 194/405 (47%), Gaps = 11/405 (2%)
Query: 75 LHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNF 134
L F+ +H P F H + A + R I+R + S S + V +
Sbjct: 118 LKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKS-GVSRVKVVESL 176
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
IS F + I+ V +V+A ++ +G AF+ +R+ S++ N
Sbjct: 177 IST---------CFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRK-GVSVSINACN 226
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
L+ G V+ D A Y +VR ++ +V T NI+++ C+++KF+ + +M K
Sbjct: 227 KLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK 286
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G ++V++NTLI + E +E + G E +T ++ GLC G+ +A
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRA 346
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+++I+ + G+ P Y L+ ++C N A E+ DE+ ++G LP +++ ++LI
Sbjct: 347 KDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGV 406
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L R +A +M + GI+PD+V + L++ C G DA ++R +G D
Sbjct: 407 LARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMD 466
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY+ ++G ++ + + L NEM++ G +PD T+ + + G
Sbjct: 467 VVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRG 511
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YN L+ + +A +D M R V PD+V+F+ LI RN AL
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FREM G P+ V + LI GF + + M EM+ GC VT ++GLC
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ A L + RG++P + + L+ C +GN AL + + + + P +
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L + M+++ I+PD +++ +L C G +A L
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P+ +T + L+ GY R + +++M+ G IPD +YN+ +DG
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N K D + F M R ++ P + LI G+ K DKAL ++ MVR
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMV---PDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD VT+N LI GFC+ + A L+ +M K P+ +S+ T++ GF E
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+N+ +M+E G + VTC L+ G C G + KA E + G++P F Y L++
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
E N A +++E+ K+G ++I ++ G K EA ++ KM++ GI P
Sbjct: 651 GYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D G TY L++G+ ++ KE
Sbjct: 711 D-----------------------------------GATYSSLINGHVSQDNMKEAFRFH 735
Query: 459 NEMLDEGFIPD 469
+EML G +PD
Sbjct: 736 DEMLQRGLVPD 746
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ N LI G+ + + KA + +M+ + + PD ++N LI G+ + + A
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM ++G N++++N ++ GF E K E + +MIE+G T L++G
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723
Query: 307 NEGRVLKACELVIDFSRRGVLPKD 330
++ + +A + +RG++P D
Sbjct: 724 SQDNMKEAFRFHDEMLQRGLVPDD 747
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%)
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E L +KG S+ AC L+ GL R A + ++++ GI + T N ++ L
Sbjct: 208 EAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNAL 267
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C + + KG+ D +TY+ L++ Y RE +E L+N G P L
Sbjct: 268 CKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327
Query: 471 ATYNSYMDGLSNARKSVR 488
TYN+ + GL K R
Sbjct: 328 LTYNAILYGLCKIGKYDR 345
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 171/335 (51%), Gaps = 1/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V AF +A + DG M + +P++ +N ++NG K + + A +D M
Sbjct: 228 YNTLVAAFFRAGEV-DGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR+ + PD V++N L+ G+C+ AL +F EM +KG P+VV+F +LI
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 346
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ V + +M E G + + VT L+DG C +G + A V + + P Y L
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A E++ E+ KG P V+ +T+I + A L ++ML++G+
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD++T++ L+ LC R DA L GL PD TY L+ G+ +E + +
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALS 526
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L ++M+ G +PD+ TY+ ++GLS + +++ +
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 11/297 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV YN ++ A F+D M+ D V P+V T+NIL+ C AL +
Sbjct: 154 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+MR GC PNVV++NTL+ FF + D + M E G + + VT +V+G+C
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A ++ + R G+ P Y LV C G + AL V E+ +KG +P V+
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+LI + + A L+ +M + G+ + VTF L++ C G DA L +
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA-----LLA 387
Query: 428 TKGL-----DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+ P + Y+ L++GY R E L++EM +G PD+ TY++ +
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 444
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ VN KA +M D F+ M + VS YN L+ G+ K +AL + M
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS-YNTLVGGYCKAGCSHEALSVFAEM 321
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PDVVTF LI C+ + A+ L R+MRE+G N V+F LI GF +
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + M + + S V L++G C GR+ +A EL+ + +G+ P Y +
Sbjct: 382 DDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + A E+ ++ +KG LP I ++LI L ++ +A L + M+K G+
Sbjct: 442 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGL 501
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L++ C G A L G+ PD +TY +L++G ++ R E +
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561
Query: 457 LVNEMLDEGFIPDLATYNSYM 477
L+ ++ E IP Y++ M
Sbjct: 562 LLFKLYHEDPIPANTKYDALM 582
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 145/303 (47%), Gaps = 15/303 (4%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ LI+GF K D AL M + R+KP VV +N LI+G+C + D A L EM
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P+VV+++T+I + + +M+E G ++T L+ LC E R+
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L + + G+ P +F Y L++ C EGN AL + D++ K G LP V+ + LI
Sbjct: 488 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLI 547
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL---------------LEDLCDVGRTV 417
GL + + +EA L+ K+ E +P + ++ L L+ C G
Sbjct: 548 NGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMN 607
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+AD++ + + DG Y +L+ G+ R + + +ML GF P+ + S +
Sbjct: 608 EADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLI 667
Query: 478 DGL 480
GL
Sbjct: 668 RGL 670
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
GV P + Y LV LCG G+ AL ++ ++ G P+V+ TL+ R + A
Sbjct: 185 GVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 244
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ M + G+ P+ VTFN ++ +C G+ DA ++ +GL PDG++Y+ LV G
Sbjct: 245 ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGG 304
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYM------DGLSNARKSVRQTR 491
Y + E ++ EM +G +PD+ T+ S + L A VRQ R
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 142/368 (38%), Gaps = 91/368 (24%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F K ++D LLA M++ +PSV YN LING+ D+A
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQ-CRIKPSVVCYNALINGYCMVGRMDEARELL 423
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M +KPDVVT++ +IS +C+N A L ++M EKG P+ +++++LIR GE
Sbjct: 424 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGE 483
Query: 274 RKF-----------------------------------DEGVNMAYEMIELGCEFSSVTC 298
++ + +++ +M++ G VT
Sbjct: 484 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTY 543
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL---------------------- 336
+L++GL R ++A +L+ +P + Y L
Sbjct: 544 SVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603
Query: 337 ----------------------------VEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
+ C GN AL ++ + G P+ +
Sbjct: 604 GLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTST 663
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+LI GL VEA +++++L L D+ L++ + G VDA +L
Sbjct: 664 ISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEG-NVDA----VLDVL 718
Query: 429 KGLDPDGM 436
G+ DG+
Sbjct: 719 HGMAKDGL 726
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G P+V+++N ++ + M+ G + T ILV LC G +A
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ D G P Y LV G A +V + + G P+++ +++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + K +A + ++M++EG+ PD V++N L+ C G + +A + + KG+ PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+T+ L+ + + LV +M + G + T+ + +DG
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDG 374
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 18/246 (7%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R++D + F+ M KL +P Y LI+G K + AL +D+MV+ V PDVVT+
Sbjct: 485 RLSDAHVLFKNMIKL-GLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTY 543
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL---------------IRGFFGE 273
++LI+G ++ + A L ++ + P ++ L ++GF +
Sbjct: 544 SVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 603
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+E + M++ +L+ G C G V+KA + G P
Sbjct: 604 GLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTST 663
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKML 392
L+ L G A +V+ +L +L A LI+ L V+A ++ M
Sbjct: 664 ISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALID-LNLNEGNVDAVLDVLHGMA 722
Query: 393 KEGILP 398
K+G+LP
Sbjct: 723 KDGLLP 728
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 354 DELWKKGNLPSVIACTTLIEGL--RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
D + G P+V L+ L R RK EA ++ M G P+ VT+N L+
Sbjct: 179 DSMLSDGVAPNVYTYNILVRALCGRGHRK--EALSILRDMRGAGCGPNVVTYNTLVAAFF 236
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G A+RL + GL P+ +T++ +V+G + + ++ + +EM+ EG PD
Sbjct: 237 RAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGV 296
Query: 472 TYNSYMDGLSNA 483
+YN+ + G A
Sbjct: 297 SYNTLVGGYCKA 308
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 168/337 (49%), Gaps = 4/337 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ +N F K + D F+ + K RP+V +N LING+ K D
Sbjct: 242 VFNILMNKFCKEGNICDAQKVFDEITKR-SLRPTVVSFNTLINGYCKVGNLDVGFRLKHH 300
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + R +PDV T++ LI+ C+ K D A LF EM E+G PN V F TLI G +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQ 360
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +M+ G + V LV+G C G ++ A +V RRG+ P Y
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTT 420
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G+ ALE+ E+ + G + + LI G+ + + ++A + +ML+ G
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD VT+ +++ C G +L + G P+ +TY++L++G + + K +
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNAD 540
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG---LSNARKSVRQ 489
L++ ML+ G +PD TYN+ ++G +NA K +Q
Sbjct: 541 MLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQ 577
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 170/395 (43%), Gaps = 8/395 (2%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIF-SCP 151
F F + S+ FR T+ + R LA F E S++ + + S +F S
Sbjct: 102 FAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGKNSASSVFISLV 161
Query: 152 EMER--IFHFAVNA----FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
EM + F V+A ++ + D + F RK P N L++ +K
Sbjct: 162 EMRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGN-LLDRMMKLNP 220
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
GFY ++ +V FNIL++ FC+ A +F E+ ++ P VVSFNT
Sbjct: 221 TGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNT 280
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G+ D G + + M + T L++ LC E ++ A L + RG
Sbjct: 281 LINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERG 340
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
++P D + L+ G + E ++ KG P ++ TL+ G + V A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+++ M++ G+ PD VT+ L++ C G A +R G++ D + + L+ G
Sbjct: 401 NIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGM 460
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+E R + E + EML G PD TY MD
Sbjct: 461 CKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAF 495
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C L++ + +L G ++L G + FN L+ C G DA ++
Sbjct: 207 GCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEI 266
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + L P ++++ L++GY + G L + M PD+ TY++ ++ L K
Sbjct: 267 TKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENK 325
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 157/300 (52%), Gaps = 1/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ YN L+ G K ALG + M+ + PDV+TFN ++ G C+ ++ A
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F+ E+GC PNVV+++TLI G K DE + + +M+ELGC ++VT +VDGL
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR+ A ++ G LP Y L++ A+ ++ E+ + G PSV+
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLL 425
TTL GL R + EA +++ M G P+++T++ +++ LC GR +A +
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
A + + P + Y L+ G + R E + M+ G IPD+ T++ ++GL +A +
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 182/404 (45%), Gaps = 46/404 (11%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F T+ + L S RF E +L++++A C + + I + V+
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC--APNAI--------TYSSIVDGL 693
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
KA R+ + L FE M + P V Y+ LI+G K D+A F +RM+R PD
Sbjct: 694 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPD 753
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVTF+ILI+G C + D L LF M E+GC ++ ++N +I + + +F +
Sbjct: 754 VVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLE 813
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKA----------CELVIDF---------SRR- 324
EM G ++VT I++ LC R+ +A C I + SRR
Sbjct: 814 EMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRS 873
Query: 325 -------------GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
G P +Y +++ L G+ +A +++ E+ +G+ P + T +
Sbjct: 874 EQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIM 933
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL + ++ A E+ML++ + PD++ ++ L++ C + DA +LL S+ G+
Sbjct: 934 ISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA--WKLLRSS-GI 990
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+P Y +V + + ++ EM + P + + S
Sbjct: 991 EPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTS 1034
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 206/520 (39%), Gaps = 148/520 (28%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSC---- 150
+ T+ +V +L R E S+L ++AN CP C I +
Sbjct: 70 NAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 129
Query: 151 ---------PEMERIFHFAVNAFVKANRMNDGLLAFEAM------------RKLIDG--- 186
P++E I ++A + R+++ F+ + ++DG
Sbjct: 130 DEMVDRGFVPDVE-IHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYK 188
Query: 187 -------------------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
P+V + + ++G K A F+D M + V P+ VT
Sbjct: 189 AGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVT 248
Query: 228 FNILISGFCRNKKFDLALGLFREMREKG-----------------------------CNP 258
++ LI G C+ K D+ALGL R+ + C P
Sbjct: 249 YDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVP 308
Query: 259 NVVSFNTLIRGFFGERKFDEGVNM-------------------------------AYEMI 287
NVV FN+L+ G R+ DE + AY +
Sbjct: 309 NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHV 368
Query: 288 EL-----GCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLC 341
EL GC + VT L+ GLCN GRV +A E+ + G+ P F Y L+E LC
Sbjct: 369 ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLC 428
Query: 342 GEGNAGIALEVVDEL----WKKGN-----------------LPSVIACTTLIEGLRRLRK 380
G++ + +++ W+ + P+++ TL+ GL +
Sbjct: 429 KAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGM 488
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A GL+E M++ G+ PD +TFN +L+ LC R +DA + A +G P+ +TY
Sbjct: 489 VRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 548
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ G ++ + E L+ +M++ G + TY++ +DGL
Sbjct: 549 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 588
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 164/382 (42%), Gaps = 55/382 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ KA R+ + + + + P+V + + ++G K A F+D M
Sbjct: 179 YNTMVDGLYKAGRLEAAGMVLQLLAESFSS-PTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--------------------- 255
+ V P+ VT++ LI G C+ K D+ALGL R+ +
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEA 297
Query: 256 --------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
C PNVV FN+L+ G R+ DE + M E GC +T IL+ GLC
Sbjct: 298 IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357
Query: 308 EGRVLKACELVIDFSRR--GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK-KGNLPS 364
R+ +A V + RR G P + L++ LC G A EV + + +G P+
Sbjct: 358 LRRIPEAYRHV-ELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416
Query: 365 VIACTTLIEGL------RRLRKGVEA---------------SGLMEKMLKEGILPDSVTF 403
L+EGL RRL + E S ++ ++ + P VT+
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ L G DA L GL PD +T++ ++ G +E R + N+ L+
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
G P++ TY++ +DGLS K
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAK 558
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 147/329 (44%), Gaps = 43/329 (13%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YNVLING K A + + ++ +P VVT++ +I G CR+ + D L EM
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC PN V++NTL+ G+ + E ++ M GC +T +++ GLC EG +
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL-------------------EVV 353
A +V + RG +P + L+ LC G A +V
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 354 DELWKKGNL----------------PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
D L+K G L P+V T ++GL + A + M + G+
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 398 PDSVTFNCLLEDLCDVGR-TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P++VT++ L++ LC G+ + LR S G+ + L+ G + +R +E
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGM----FAFSSLLHGLCQAHRLEEAIQ 299
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M +P++ +NS M+GL AR+
Sbjct: 300 LLKAM---PCVPNVVCFNSLMNGLCQARR 325
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+VT+N+LI+G C+ + A FR+ + G P VV+++T+I G + + D+G +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK-LCGE 343
EM GC ++VT LV+ L +GR +A L+ + G P + FGL+ K LC E
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGC-PPELITFGLIIKGLCKE 119
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A VVDE+ +G +P V T L+ L L + EA +++L G PD+VT+
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N +++ L GR A + L + P T+ I V G ++ + M
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
G P+ TY++ +DGL A K
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGK 261
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 163/398 (40%), Gaps = 70/398 (17%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+ +K RM D ++ MR P YN LI+GF K + +A+G M
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRD-AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG------- 269
+ P VVT+ L G CR+ +FD A+ + M +GC PN +++++++ G
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699
Query: 270 -----FFGERKFDEGV--------------------NMAYE----MIELGCEFSSVTCEI 300
+F + DE V + AYE MI G VT I
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSI 759
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++GLC+ GR+ EL + RG + Y ++ C +G A +++E+ G
Sbjct: 760 LINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG 819
Query: 361 -----------------------------NLPS----VIACTTLIEGLRRLRKGVEASGL 387
++P I+ TLI L R+ +A L
Sbjct: 820 IAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALEL 879
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M+ +G PD+ + +++ L G A +L ++G PD TY I++SG ++
Sbjct: 880 LRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSK 939
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + EML + PD Y+S +D A K
Sbjct: 940 AKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK 977
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 151/346 (43%), Gaps = 57/346 (16%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + K R+ + E MR+ P+V ++ LI G ++A Y+RM
Sbjct: 348 YNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407
Query: 217 VR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-------------------- 255
V + + P+ T+ L+ G C+ F +M E+
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467
Query: 256 -CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
C P +V++NTL+ G + + + MIE G +T ++DGLC E R+L A
Sbjct: 468 VCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDA 527
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+ F R ALE +G P+V+ +TLI+G
Sbjct: 528 HNV---FKR-------------------------ALE-------RGCRPNVVTYSTLIDG 552
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L ++ K EA L+ KM++ G ++VT++ +++ L VGR DA + G PD
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+TY+ L+ G+ + R +E L+ EML+ GF P + TY + GL
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 170/438 (38%), Gaps = 112/438 (25%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDK------ 208
++ +N KA R+ D AF A RK I RP+V Y+ +I+G + E DK
Sbjct: 4 YNVLINGLCKAGRVCD---AFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 209 -----------------------------ALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
A +RM + P+++TF ++I G C+
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 240 KFDLALGLFREMREKGCNPNV-----------------------------------VSFN 264
+ + A + EM ++G P+V V++N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSS---VTCEILVDGLCNEGRVLKACELVIDF 321
T++ G + + E M ++ L FSS T I VDGL G + A E
Sbjct: 181 TMVDGLYKAGRL-EAAGMVLQL--LAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSM 237
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIAL-----------------------------EV 352
+ GV P Y L++ LC G IAL E
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEA 297
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ L +P+V+ +L+ GL + R+ EA L + M + G D +T+N LL+ LC
Sbjct: 298 IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCK 357
Query: 413 VGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD-EGFIPDL 470
+ R +A R + L+ T+G P+ +T+ L+ G R + + M+ EG P+
Sbjct: 358 LRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNR 417
Query: 471 ATYNSYMDGLSNARKSVR 488
TY ++GL A S R
Sbjct: 418 FTYAFLLEGLCKAGDSRR 435
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ A +R+++ + F ++ + D R +S YN LI V R ++AL MV
Sbjct: 829 IVIKALCGNDRIDEAVSYFHSIPE--DCRDEIS-YNTLITSLVASRRSEQALELLRAMVA 885
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
D PD + ++ G + ++A L +EMR +G +P++ ++ +I G ++
Sbjct: 886 DGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPL 945
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+ + ++ L+D C +V A +L+ G+ P Y +V+
Sbjct: 946 ACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVD 1002
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
LC ALEV+ E+ K P + T+L
Sbjct: 1003 SLCKNRGTDKALEVIREMKSKNCEPGIHIWTSL 1035
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 7/184 (3%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +R ++ G P Y +++G K + A M PD+ T+ I+IS
Sbjct: 876 ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMIS 935
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCE 292
G + K+ LA F EM K P+ + +++LI F K D+ A++++ G E
Sbjct: 936 GLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDD----AWKLLRSSGIE 991
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ +VD LC KA E++ + + P + L EG A+++
Sbjct: 992 PTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKL 1051
Query: 353 VDEL 356
V++L
Sbjct: 1052 VNDL 1055
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 107 HDHTTFLFIVRSLASSYRFSELHSVLNFISAN---PCPCSN----DGIFSC--PEME--- 154
D ++ ++ SL +S R + +L + A+ P C+ DG+F PE+
Sbjct: 855 RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914
Query: 155 -------------RIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGF 200
R + ++ KA ++ FE M RK + +P +Y+ LI+ F
Sbjct: 915 LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL--KPDAIVYSSLIDAF 972
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K + D A + + ++P + ++ ++ C+N+ D AL + REM+ K C P +
Sbjct: 973 CKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGI 1029
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEM 286
+ +L + E + DE V + ++
Sbjct: 1030 HIWTSLATAYVAEGRVDEAVKLVNDL 1055
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 151/293 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN L+NG K + ++A + MV V PDV+T+++L+ FC+ + D AL L
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +GC PNVV+FN++I G + E +A ++ VT IL+ G C
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +A L + + + P + L++ LC G A +++D + G P+V+
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ GL + + E +E+M+ G +P+S+T+ L+ LC RT DA +L
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLK 495
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G DPD +TY+ILV G + + ++ ++ EM+ +G PD T+ + GL
Sbjct: 496 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGL 548
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 163/304 (53%), Gaps = 9/304 (2%)
Query: 189 SVSIYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
SV+ YN+++ + E +AL F M RD V P +VT+N +I+G C++ + + L
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F E+ ++G +P+VV++NTLI +E + M GC + VT +L++GLC
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 308 EGRVLKACELVIDFSRRG--VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL--- 362
GR+ +A EL+ + +R+ VLP Y ++ LC + A E++ L + G+L
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVS 222
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P + +TLI+GL + + EA + M+ G +P+ VT+N L+ LC + A +
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG+ PD +TY +LV + + +R E L++ M G P++ T+NS +DGL
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340
Query: 483 ARKS 486
+ +S
Sbjct: 341 SDRS 344
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 191/431 (44%), Gaps = 45/431 (10%)
Query: 81 KLHHHPQFTHYDFHI--FAWASTIDSFRHDH------------TTFLFIVRSLASSYRFS 126
K HHP Y+ I A ++ R H T+ ++ L R
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL-------AFEA 179
E ++ ++ SC + I + N+F+ DGL A E
Sbjct: 169 EARELIQEMTRK----------SCDVLPNIITY--NSFL------DGLCKQSMTAEACEL 210
Query: 180 MRKLIDGR----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
MR L DG P ++ LI+G KC + D+A D M+ P+VVT+N L++G
Sbjct: 211 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGL 268
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ K + A + M +KG P+V++++ L+ F + DE + + + M GC +
Sbjct: 269 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 328
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT ++DGLC R +A ++ + R ++P + L+ C GN A + +E
Sbjct: 329 VTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ K P V+ LI+GL + + A +++ M G+ P+ VT+N L+ LC GR
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ + G P+ MTY LV R +R + LV+++ G+ PD TYN
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 476 YMDGLSNARKS 486
+DGL + K+
Sbjct: 509 LVDGLWKSGKT 519
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 164/359 (45%), Gaps = 8/359 (2%)
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
+ +N N CP + S ++ + + +A L F P+
Sbjct: 21 ATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPT 80
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ YN +ING K E + ++ +V+ PDVVT+N LI C+ + A L
Sbjct: 81 IVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 140
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGLCN 307
M +GC PNVV+++ LI G + DE + EM C+ + +T +DGLC
Sbjct: 141 GMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 200
Query: 308 EGRVLKACELVIDFSRRGVL---PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+ +ACEL+ R G L P + L++ LC G A D++ G +P+
Sbjct: 201 QSMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPN 257
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ L+ GL + K A ++E M+ +G+ PD +T++ L++ C R +A L
Sbjct: 258 VVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 317
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++G P+ +T++ ++ G + +R E + ++ + +PD T+N + G A
Sbjct: 318 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKA 376
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 137/285 (48%), Gaps = 9/285 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC----REFDKALGF 212
+ V+AF KA+R+++ L M P+V +N +I+G K F AL
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDRSGEAFQIALQV 354
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y+RM+ PD VTFNILI+G C+ F+ A LF EM K P+V++F LI G
Sbjct: 355 YNRML----VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCK 410
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + ++ M LG + VT +LV GLC GR+ + CE + + G +P+
Sbjct: 411 AGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMT 470
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y LV LC AL++V +L G P + L++GL + K +A ++E+M+
Sbjct: 471 YGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 530
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+G PDS TF L G L + KG+ PD T
Sbjct: 531 GKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +V + + R E +L+ +++ C P + F+ ++ K+
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCT---------PNV-VTFNSIIDGLCKS 341
Query: 168 NRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+R + +A + +++ P +N+LI G K F++A ++ MV ++PDV+
Sbjct: 342 DRSGEAFQIALQVYNRML--VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TF LI G C+ + + A + M G PNVV++N L+ G + +E EM
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ GC S+T LV LC R A +LV G P Y LV+ L G
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A+ V++E+ KG+ P GL R L+ +L +G+LPD+ T + +
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579
Query: 407 LE 408
L+
Sbjct: 580 LD 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 42/269 (15%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFR-EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
V +NI++ CR + AL +FR EM G P +V++NT+I
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII---------------- 88
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+GLC + EL + +RG P Y L++ LC
Sbjct: 89 -------------------NGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKA 129
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG--ILPDSV 401
G+ A + + +G +P+V+ + LI GL ++ + EA L+++M ++ +LP+ +
Sbjct: 130 GDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 189
Query: 402 TFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L+ LC T +A L L + + PD +T+ L+ G + + E N +
Sbjct: 190 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--D 247
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+M+ G++P++ TYN+ ++GL A K R
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMER 276
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 163/325 (50%), Gaps = 1/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ F + + +P+V YN +I+G +F +A + M
Sbjct: 219 FNIMINVLCKEGKLKKAK-EFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++PD T+N ISG C+ + + A GL +M E G PN V++N LI G+ +
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ EMI G S VT + + L EGR+ A ++ + +G++P + L
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G+A A ++DE+ KG P+++ T+LI L + + EA L K+ +EG+
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD + FN L++ C G A +L + PD +TY+ L+ GY RE + +E
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
L++EM G PD +YN+ + G S
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYS 542
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 207/467 (44%), Gaps = 34/467 (7%)
Query: 30 SRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITP---SSLLHFLKSKLHHHP 86
S +TPP ++P+ T H+ + + H + Q+ P SLL + L H+P
Sbjct: 21 SHSQTPPFSIPTTLTESTLLHS--IESSQWHFI----EQVAPHLTPSLLSSTLTTLRHNP 74
Query: 87 QFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS--YRFSELHSVLNFIS---ANPCP 141
Q H+ + H H+ L SLA YR +N I +P
Sbjct: 75 QLV---LHLLSHLQN-----HPHSLDL-ATSSLAICVLYRLPSPKPSINLIQRLILSP-T 124
Query: 142 CSNDGIFSCPEMER---------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
C+N IF + R IF V A+ + + N+ L F +++ P++
Sbjct: 125 CTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEK-GFVPNIET 183
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
N +++ F+K A Y M R ++ + TFNI+I+ C+ K A M
Sbjct: 184 CNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHME 243
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PNVV++NT+I G KF + M + G E T + GLC EGR+
Sbjct: 244 TLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLE 303
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L+ G++P Y L++ C +G+ A DE+ KG + S++ I
Sbjct: 304 EASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFI 363
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + +A ++++M ++G++PD+VT N L+ C G A L KG+
Sbjct: 364 HALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQ 423
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P +TY L+ + NR KE + L +++ EG +PD+ +N+ +DG
Sbjct: 424 PTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG 470
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 2/301 (0%)
Query: 182 KLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
K+++G P+ YN LI+G+ + DKA + D M+ + +VT+N+ I
Sbjct: 311 KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG 370
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ A + +EMREKG P+ V+ N LI G+ + EM+ G + + VT
Sbjct: 371 RMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYT 430
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ L R+ +A L + G+LP + L++ C GN A +++ E+
Sbjct: 431 SLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM 490
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
LP I TL++G R K EA L+++M + GI PD +++N L+ G DA
Sbjct: 491 KVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDA 550
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R+R T G DP +TY+ L+ G + + E L+ EM+ +G PD +TY S ++
Sbjct: 551 FRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610
Query: 480 L 480
+
Sbjct: 611 M 611
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 1/254 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++A RM D + MR+ P +N+LING+ +C + +A G D M
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREK-GMMPDAVTHNILINGYCRCGDAKRAFGLLDEM 417
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V ++P +VT+ LI + + A LF +++++G P+++ FN LI G
Sbjct: 418 VGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNI 477
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + EM + +T L+ G C EG+V +A +L+ + RRG+ P Y L
Sbjct: 478 DRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTL 537
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G+ A V DE+ G P+++ LI+GL + ++G A L+++M+ +GI
Sbjct: 538 ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGI 597
Query: 397 LPDSVTFNCLLEDL 410
PD T+ ++E +
Sbjct: 598 TPDDSTYLSIIEAM 611
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 36/266 (13%)
Query: 216 MVRDRVKPDV-VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ RDRV + F++L+ +C KK + AL F ++EKG PN+ + N ++ F
Sbjct: 136 LARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLN 195
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM + S T I+++ LC EG+ L K ++
Sbjct: 196 RTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK----------------LKKAKEFI 239
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
G +E L G P+V+ T+I G K A + + M +
Sbjct: 240 GHMETL-------------------GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDK 280
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD T+N + LC GR +A L GL P+ +TY+ L+ GY + +
Sbjct: 281 GLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKA 340
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+EM+ +G + L TYN ++ L
Sbjct: 341 YAYRDEMISKGIMASLVTYNLFIHAL 366
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 171/330 (51%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F VNAF R++D + F M K + P+V YN +I+G K D+A F ++
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEK-VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEK 257
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++RVKP +VT+ +LI+G + ++FD A + +EM ++G PN V +NTLI G+
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + +MI G +SVTC L+ G C ++ A L+ + G + +
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ +LC + AL + E+ + P+ T L+ GL + K EA L ++L++G
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++VT N L+ LC+ G +A +L +GL D ++Y+ L+ +E + +EG
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM+ G PD+ TYN + GL N K
Sbjct: 498 KLKEEMVRRGIQPDMYTYNMLLHGLCNMGK 527
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 145/296 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ N L++ VK E + +D M V PDV F+ +++ FC + D A+ L
Sbjct: 160 PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIEL 219
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FR+M + G PNVV++N +I G + DE +M + + S VT +L++GL
Sbjct: 220 FRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVK 279
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R +A ++ + S RG P + Y L++ C GN AL++ D++ G P+ +
Sbjct: 280 LERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVT 339
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C +LI+G + + A L+E+ML G + + TF ++ LC R A +
Sbjct: 340 CNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML 399
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ P+ +LVSG + ++ E L +L++GF + T N+ + GL A
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEA 455
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI K + ++ + MVR ++PD+ T+N+L+ G C K + A GL+ E +
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P+ ++ +I G+ + +EG + EM+ + E ++V L+ C G +
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L D RG+ Y L+ L G A +++DE+ K+G P+V+ T LI
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALI 659
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + + ++++M + P+ +T+ ++ C +G A +L + KG+
Sbjct: 660 GGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIV 719
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
PD +TY+ L +G+ +E + +E + + M G D TY + +DG
Sbjct: 720 PDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 156/349 (44%), Gaps = 35/349 (10%)
Query: 172 DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
D L F L + +P+ + +L++G + + +A+ + R++ + VT N L
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G C + A L +EM E+G + +S+NTLI E K +EG + EM+ G
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY------------------ 333
+ T +L+ GLCN G++ +A L + + G P + Y
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568
Query: 334 ----------------FG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+G L+ C GN A + D++ +G + ++LI GL
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLS 628
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ A+ L+++M KEG+ P+ V + L+ C +G+ D + S + P+ +
Sbjct: 629 NIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKI 688
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY I+++G+ + K L+NEM +G +PD TYN+ +G K
Sbjct: 689 TYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGK 737
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 7/322 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRK---LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ + K+N+M E M +I+ S+ + L +KCR FD AL F M+
Sbjct: 344 IQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLC---LKCR-FDSALLFIMEML 399
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
KP+ +L+SG C+N K A+ L+ + EKG N V+ N LI G +
Sbjct: 400 LRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKE 459
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + EM+E G S++ L+ C EG+V + +L + RRG+ P + Y L+
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC G A + E K GN P +I+G + + E L ++M+ I
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIE 579
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
++V + L+ C+ G +A RLR ++G+ TY L+ G + L
Sbjct: 580 QNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQL 639
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
++EM EG P++ Y + + G
Sbjct: 640 LDEMRKEGLSPNVVCYTALIGG 661
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 138/286 (48%), Gaps = 3/286 (1%)
Query: 163 AFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
A K ++ +G L E +R+ I +P + YN+L++G + ++A G + ++
Sbjct: 486 ACCKEGKVEEGFKLKEEMVRRGI--QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PD T+ I+I G+C+ + + LF+EM N V + TLIR + E
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ +M G +S T L+ GL N G V A +L+ + + G+ P Y L+ C
Sbjct: 604 LRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYC 663
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G ++ E+ P+ I T +I G +L A+ L+ +M ++GI+PD+V
Sbjct: 664 KLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
T+N L C G+ +A ++ L ST G+ D +TY L+ G+ +
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 35/168 (20%)
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK--------------GV---------- 382
G+ E+ L KG PS+ C L+ L + + GV
Sbjct: 144 GVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTM 203
Query: 383 -----------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+A L KM K G+ P+ VT+N ++ LC GR +A + + + +
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV 263
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P +TY +L++G + R E ++ EM D G+ P+ YN+ +DG
Sbjct: 264 KPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 191/381 (50%), Gaps = 12/381 (3%)
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
+RS+ S+ E + ++ I + CS G F + I V A+V+ ++ +L
Sbjct: 126 IRSILDSFVKGETNCSISLIFHSLSVCS--GQFCANSI--IADMLVLAYVENSKT---VL 178
Query: 176 AFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
EA ++ D R +S+ N L++ VK EF Y M+R ++ P+++TFN +I+
Sbjct: 179 GLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVIN 238
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGE-RKFDEGVNMAYEMIELG 290
G C+ K + A + +M+ G PNVV++NTLI G+ G K + + EM+E
Sbjct: 239 GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK 298
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+SVT +L+DG C + + A ++ + +G+ P Y LV LC EG A
Sbjct: 299 VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAK 358
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++DE+ P+VI LI G + + EA L + + K+G+ P+ +TFN LL
Sbjct: 359 VLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G+ +A L+ + KG P+ TY+ L+ G+ RE + +E +NL+NEM G D
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Query: 471 ATYNSYMDGLSNARKSVRQTR 491
TYN + ++ + R
Sbjct: 479 VTYNILISAWCEKKEPKKAAR 499
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 4/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK---CREFDKALGFY 213
F+ +N K ++N + M K+ P+V YN LI+G+ K + KA
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDM-KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MV ++V P+ VTFN+LI GFC+++ AL +F EM+ +G P VV++N+L+ G E
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K +E + EM+ + + +T L++G C + + +A EL + ++G+ P +
Sbjct: 352 GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C G A + + +KG LP+ LI G R K E L+ +M
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ D+VT+N L+ C+ A RL KGL P +TY+IL++GY E +
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
NL +M EG ++ TYN + G
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQG 557
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 19/315 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++ F K ++ L FE M+ G +P+V YN L+NG + ++A D
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQS--QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +KP+V+T+N LI+G+C+ K + A LF + ++G PNV++FNTL+ G+ K
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M+E G ++ T L+ G C EG++ + L+ + RGV Y
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C + A ++DE+ KG PS + L+ G A L ++M KEG
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ VT+N L++ C G+ DA+ L KGL P+ TY I+ KE
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII----------KE-- 591
Query: 456 NLVNEMLDEGFIPDL 470
EM+++GF+PD+
Sbjct: 592 ----EMMEKGFLPDI 602
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 174/368 (47%), Gaps = 40/368 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ F V + KA + L FE M+ PS+ YNVLIN EF KAL + M
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSE-SCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 217 VRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREK--------------------- 254
R+ RV+PD T+N LISG C + + A L EMR+K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 255 --------------GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
GCNP+V +FN +++GF ++ + M+E G + +V+ I
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 301 LVDGLCNEGRVLKACELVIDFSRR--GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ GL G++ ++ +++ + + R G +P + L+ LC G ALEV + +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+ TTLI GL R K ++A L EKM + I PD+V +N L+ C G +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 419 ADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A++L R ++ GL P +T++ L+ G+ + + LV EM +G D TY +
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371
Query: 478 DGLSNARK 485
GLS A K
Sbjct: 372 AGLSRATK 379
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+H ++ K ++++ L M G P+V ++ LI+G + E +KAL +
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 248
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ KP+ T+ LI+G CR +K A LF +M + P+ V++N+LI G+
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 308
Query: 276 FDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + EM G + + VT L+DG C G++ +A ELV + +G+ Y
Sbjct: 309 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYR 368
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L ALEV ++ +K L ++C + + GL + +A + E K
Sbjct: 369 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 428
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRL 422
G +P+ TF L E L +GR DA +L
Sbjct: 429 GAVPNPETFRILSESLIKLGRVEDAQKL 456
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM- 251
Y+ ++ K +AL ++ M + P +VT+N+LI+ C +F AL LF+ M
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
REK P+ ++NTLI GLC+ G
Sbjct: 73 REKRVEPDRWTYNTLI-----------------------------------SGLCSSGNT 97
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A +L+ + + + F Y +++ L E + +V++E+ G P V A +
Sbjct: 98 EGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGV 157
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTK 429
++G R +A + + M++ G PD+V+++ L+ L +G+ ++ ++ +
Sbjct: 158 MQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAA 217
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G P+ +T+ L+ G R ++ + ML+ G P+ TY + + GL A K ++
Sbjct: 218 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + K M++ + M +P++ +N LI+GF K + +A M
Sbjct: 296 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 355
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ D T+ ILI+G R K D AL ++++MREK + VS + + G
Sbjct: 356 GTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNI 415
Query: 277 DEGVNMAYEMIELGCEFSSV----TCEILVDGLCNEGRVLKACELV 318
D+ AY + E + +V T IL + L GRV A +L+
Sbjct: 416 DQ----AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 210/465 (45%), Gaps = 44/465 (9%)
Query: 36 PVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHI 95
P++ +++ T HT L ++ TP+ LL L+ + +
Sbjct: 30 PISNSTLSFASTQQHTATL-----------SSNFTPAQLLDTLRRQNDETAAL-----RL 73
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
+WAS +FR + + + I+R L F+ + +L + C +++R
Sbjct: 74 LSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDC-----------QIDR 122
Query: 156 -IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++++ K + L E M +YN L+N V + +
Sbjct: 123 GVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHS 182
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV +KPDV TFNILI C+ + A+ + EM G P+ +F TL++GF E
Sbjct: 183 TMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEG 242
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK----------------ACELV 318
D + +M++ GC ++VT +LV G C EGR+ + A EL
Sbjct: 243 NMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELY 302
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G P +F Y L++ LC G AL ++ E+ G +VI TLI+G +
Sbjct: 303 NEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKN 362
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+K EA + ++M +G+ +SVT+N L++ LC R +A +L +GL PD TY
Sbjct: 363 KKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTY 422
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +++ + RE ++ ++V M G PD+ TY + + GL A
Sbjct: 423 NSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKA 467
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 22/346 (6%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLID-GRPSVSIYNVLI-NGFVKCREFDKALG 211
E+ F + F++ M DG AF +++D G P ++ ++ +GF K ++AL
Sbjct: 228 EKTFTTLMQGFIEEGNM-DG--AFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALS 284
Query: 212 F----------------YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
F Y+ M +PD T+N+LI C K ALGL REM G
Sbjct: 285 FIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISG 344
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C NV+++NTLI GF +K +E + +M G +SVT L+DGLC RV +A
Sbjct: 345 CARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAA 404
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+L+ G+ P F Y ++ C EG+ A ++V + G P ++ TLI GL
Sbjct: 405 QLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGL 464
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ + AS L+ + +G++ +N +++ L RT +A RL KG PD
Sbjct: 465 CKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDA 524
Query: 436 MTYHILVSGYTRENR-RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY I+ G + E + V EM+++GF+P+ +++ +GL
Sbjct: 525 FTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGL 570
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN LI+GF K ++ ++A +D+M + + VT+N LI G C++++ A L
Sbjct: 348 NVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLM 407
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+M +G P+ ++N+++ F E + ++ M GCE VT L+ GLC
Sbjct: 408 DQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKA 467
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GRV A L+ +G++ Y +++ L A+ + E+ +KGN P
Sbjct: 468 GRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTY 527
Query: 369 TTLIEGLRRLRKGV-EASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ GL + EA + +M+++G LP+ +F L E LC +
Sbjct: 528 KIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSL 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
I C ++ ++ F K ++ + F+ M R SV+ YN LI+G K R
Sbjct: 342 ISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVT-YNTLIDGLCKSRRV 400
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+A D+M+ + +KPD T+N +++ FCR A + + M GC P++V++ TL
Sbjct: 401 QEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTL 460
Query: 267 IRGF-----------------------------------FGERKFDEGVNMAYEMIELGC 291
I G F ++ E + + EM E G
Sbjct: 461 IGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGN 520
Query: 292 EFSSVTCEILVDGLCNEGR-VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ T +I+ GL N G + +A + VI+ +G LP+ ++ L E LC +
Sbjct: 521 TPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLI 580
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
++VD + +K N +I G ++RK +A
Sbjct: 581 KLVDLVMEKANFSQ--NEVVMIRGFLKIRKFQDA 612
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 23/319 (7%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ SIY ++ K F+ M + D I I + + + ++ L
Sbjct: 84 RPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILC 143
Query: 247 LFREMR-EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ M E G + + +N L+ K N+ M+ G + T IL+ L
Sbjct: 144 IVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKAL 203
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW-------- 357
C ++ A ++ + S G++P + + L++ EGN A V +++
Sbjct: 204 CKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTN 263
Query: 358 -----------KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
K+G + + + I+ + K A L +M +G PD T+N L
Sbjct: 264 VTVNVLVHGFCKEGRIEEAL---SFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNML 320
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ LC G+ +A L G + +TY+ L+ G+ + + +E E + ++M +G
Sbjct: 321 IDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGL 380
Query: 467 IPDLATYNSYMDGLSNARK 485
+ TYN+ +DGL +R+
Sbjct: 381 SRNSVTYNTLIDGLCKSRR 399
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 153/291 (52%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN L+ K D G Y+ M+ P+ T+ L+ C+ ++F+ A +FR M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC+PNV S++ LI G +K DE + EMI+ G + + VT L+ GLC G++
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L RG P Y L++ +G+ G A + +E+ +KG +P+V +L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G R + L + ML++G +P+ TFN LL+ C +G V+A RL L + G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD ++Y+ L+ G + + E + L+ EM+ G PD+ +YN +DG S +
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 147/298 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y L+ + + F++A + M P+V +++ILI+G CR +K D A L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G PNVV++ +L+ G K E V++ M+ GC V +L+DG
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A L + +G +P F Y L+ +G G + ++ ++G +P++
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++G ++ VEA L +M G PD V++N L+ +C G+ +A RL
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ PD ++Y+IL+ GY++ L E+ G PD +Y++ +D L A K
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 173/390 (44%), Gaps = 11/390 (2%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA + + H ++ +++ LA S R ++ N + C +
Sbjct: 4 FQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNT----------Y 53
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ + + + +A R + F M P+V Y++LI G + ++ D+A +
Sbjct: 54 TYGYLLRSLCQAQRFEEARSVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNE 112
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +P+VVT+ L+SG C+ K A+ LF M +GC P+ V +N LI GF +
Sbjct: 113 MIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EM+E GC + T L+ G +G + L D R+G +P F +
Sbjct: 173 MGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNN 232
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G+ A + E+ G P V++ TL+ G+ K EA L+ +M++ G
Sbjct: 233 LLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSG 292
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V++N L++ G A +L GL+PD +Y ++ R +
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M+ G PD A + GL +
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGER 382
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 145/308 (47%), Gaps = 3/308 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
CP +++ ++ F K M + FE M L G P+V YN L++GF + EF
Sbjct: 152 GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM--LEKGCIPTVFTYNSLLSGFSRKGEFG 209
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ + M+R P++ TFN L+ GFC+ A LF EMR GC P+VVS+NTL+
Sbjct: 210 RVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLM 269
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
RG + K E + EMI G V+ IL+DG G + A +L + + G+
Sbjct: 270 RGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLE 329
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P F Y +++ LC G G A V ++ G+ P L+ GL R + E+ L
Sbjct: 330 PDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M+K +P +N L+ LC R+ D + + +G PD +++ R
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449
Query: 448 ENRRKEGE 455
+ ++ E
Sbjct: 450 SDDKEAAE 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 192/452 (42%), Gaps = 70/452 (15%)
Query: 73 SLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHT-----------------TFLFI 115
+ + S++H++ Y++ + A S R DH T+ ++
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAK---SGRCDHVYGTYNDMLGAGCVPNTYTYGYL 58
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
+RSL + RF E SV ++A C + +FS + + + ++++
Sbjct: 59 LRSLCQAQRFEEARSVFRGMAAQGC---SPNVFS-------YSILIAGLCRGQKVDE--- 105
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++IDG +P+V Y L++G K + +A+ + RMV PD V +N+LI
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GF + A LF EM EKGC P V ++N+L+ GF + +F ++ +M+ GC
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T L+DG C G +++A L ++ G P Y L+ +C +G A ++
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ + G P +++ LI+G + A L ++ K G+ PD+ +++ +++ LC
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML----------- 462
G+ A + G PD LV G R R E L M+
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 463 ------------------------DEGFIPDL 470
+ GF PD+
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 166/321 (51%), Gaps = 5/321 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F + R++ L F + K+I +P++ + LING K EF +A+ +D MV
Sbjct: 135 MNCFCQLQRVD---LGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+PDV T+N +I+G C+ + A GL ++M E GC PN+V+++TLI +R +E
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+++ M G T L+ GLC R +A L+ + + ++P + LV+
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EG AL V+ + + G P+V+ ++L+ G VEA L M+ +G P
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKP 371
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ ++N L+ C R +A +L +GL P+ ++Y+ L+ G+ + + +E ++L
Sbjct: 372 NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLF 431
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
M G +PDL TY+ +DG
Sbjct: 432 RNMCTNGNLPDLFTYSILLDG 452
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 170/332 (51%), Gaps = 2/332 (0%)
Query: 156 IFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I FA ++A VK + D +++ +L+ P++ ++ +N F + + D
Sbjct: 92 IIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVL 151
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++++ ++P +VTF LI+G C+ +F A+ LF +M KGC P+V ++NT+I G
Sbjct: 152 AKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKI 211
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + +M E GC+ + VT L+D LC + V +A ++ +G+ P F Y
Sbjct: 212 GETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTY 271
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC A +++E+ +P ++ L++ + K EA G+++ M +
Sbjct: 272 TSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ P+ VT++ L+ V+A +L + TKG P+ +Y+IL++GY + R E
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L NEM+ +G P+ +YN+ + G K
Sbjct: 392 AMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 1/328 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ + +N+ L F M K P + Y LI G K + +A + M
Sbjct: 240 IDSLCRDRLVNEALDIFSYM-KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD+VTFN+L+ FC+ K ALG+ + M E G PNVV++++L+ G+ E
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ + MI GC+ + + IL++G C R+ +A +L + +G+ P + Y L+
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGF 418
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A ++ + GNLP + + L++G + +A L M + P+
Sbjct: 419 CQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 478
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V + L+ +C G DA +L +GL P Y +++G +E E
Sbjct: 479 VMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRN 538
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVR 488
M +G PD +YN + GL + R
Sbjct: 539 MEADGCPPDEISYNVIIRGLLQHKDESR 566
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y+ LI+ + R ++AL + M + PD+ T+ LI G C+ ++ A
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASA 289
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM P++V+FN L+ F E K E + + M E+G E + VT L+ G
Sbjct: 290 LLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYS 349
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V++A +L +G P F Y L+ C A+++ +E+ +G P+ +
Sbjct: 350 LWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNV 409
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI G +L K EA L M G LPD T++ LL+ C G A RL
Sbjct: 410 SYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L P+ + Y ILV + K+ L +E+ +G P + Y + ++GL
Sbjct: 470 QSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGL 523
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N + KA R+++ + F M + G P+ YN LI+GF + + +A +
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEM--IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + PD+ T++IL+ GFC+ A LFR M+ PN+V + L+
Sbjct: 434 MCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGN 493
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + E+ G + +++GLC EG + +A E + G P + Y
Sbjct: 494 HKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNV 553
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
++ L + AL +V E+ +G + V C
Sbjct: 554 IIRGLLQHKDESRALLLVGEMRDRGFIADVRPC 586
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 5/337 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V AF +A + DG M ++DG +P++ +N ++NG K + + A +D
Sbjct: 188 YNTLVAAFFRAGEV-DGAERLVGM--MLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFD 244
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+R+ + PD V++N L+ G+C+ AL +F EM +KG P+VV+F +LI
Sbjct: 245 EMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAG 304
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ V + +M E G + + VT L+DG C +G + A V + + P Y
Sbjct: 305 NLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYN 364
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G A E++ E+ KG P V+ +T+I + A L ++ML++
Sbjct: 365 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 424
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+LPD++T++ L+ LC+ R DA L GL PD TY L+ G+ +E +
Sbjct: 425 GVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERA 484
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+L ++M+ G +PD+ TY+ ++GLS + +++ +
Sbjct: 485 LSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 521
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 11/297 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV YN ++ A F+D M+ D V P+V T+NILI C AL +
Sbjct: 114 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+MR GC PNVV++NTL+ FF + D + M++ G + + VT +V+G+C
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A ++ + R G+ P Y LV C G + AL V E+ +KG +P V+
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+LI + + A L+ +M + G+ + VTF L++ C G DA L +
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA-----LLA 347
Query: 428 TKGL-----DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+ P + Y+ L++GY R E L++EM +G PD+ TY++ +
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISA 404
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ VN KA +M D F+ M + VS YN L+ G+ K +AL + M
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS-YNTLVGGYCKAGCSHEALSVFAEM 281
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PDVVTF LI C+ + A+ L R+MRE+G N V+F LI GF +
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 341
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + M + + S V L++G C GR+ +A EL+ + +G+ P Y +
Sbjct: 342 DDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 401
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + A E+ ++ +KG LP I ++LI L ++ +A L + M+K G+
Sbjct: 402 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGL 461
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L++ C G A L G+ PD +TY +L++G ++ R E +
Sbjct: 462 QPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 521
Query: 457 LVNEMLDEGFIPDLATYNSYM 477
L+ ++ E IP Y++ M
Sbjct: 522 LLFKLYHEEPIPANTKYDALM 542
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 145/303 (47%), Gaps = 15/303 (4%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ LI+GF K D AL M + R+KP VV +N LI+G+C + D A L EM
Sbjct: 328 FTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P+VV+++T+I + + +M+E G ++T L+ LC E R+
Sbjct: 388 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLS 447
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L + + G+ P +F Y L++ C EGN AL + D++ K G LP V+ + LI
Sbjct: 448 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLI 507
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL---------------LEDLCDVGRTV 417
GL + + +EA L+ K+ E +P + ++ L L+ C G
Sbjct: 508 NGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMN 567
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+AD++ + + DG Y +L+ G+ R + + +ML GF P+ + S +
Sbjct: 568 EADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLI 627
Query: 478 DGL 480
GL
Sbjct: 628 RGL 630
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
GV P + Y L+ LCG G+ AL ++ ++ G P+V+ TL+ R + A
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 204
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ ML G+ P+ VTFN ++ +C G+ DA ++ +GL PDG++Y+ LV G
Sbjct: 205 ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGG 264
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYM------DGLSNARKSVRQTR 491
Y + E ++ EM +G +PD+ T+ S + L A VRQ R
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 141/368 (38%), Gaps = 91/368 (24%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F K ++D LLA MR+ +PSV YN LING+ D+A
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQ-CRIKPSVVCYNALINGYCMVGRMDEARELL 383
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR----- 268
M +KPDVVT++ +IS +C+N A L ++M EKG P+ +++++LIR
Sbjct: 384 HEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEE 443
Query: 269 ------------------------------GFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
G E + +++ +M++ G VT
Sbjct: 444 KRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTY 503
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL---------------------- 336
+L++GL R ++A +L+ +P + Y L
Sbjct: 504 SVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMK 563
Query: 337 ----------------------------VEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
+ C GN AL ++ ++G P+ +
Sbjct: 564 GLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTST 623
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+LI GL VEA +++++L L D+ L++ + G VDA +L
Sbjct: 624 ISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEG-NVDA----VLDVL 678
Query: 429 KGLDPDGM 436
G+ DG+
Sbjct: 679 HGMAKDGL 686
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 7/243 (2%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G P+V+++N ++ + M+ G + T IL+ LC G +A
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ D G P Y LV G A +V + G P+++ +++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + K +A + ++M++EG+ PD V++N L+ C G + +A + + KG+ PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG------LSNARKSVR 488
+T+ L+ + + LV +M + G + T+ + +DG L +A +VR
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 489 QTR 491
R
Sbjct: 350 GMR 352
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R++D + F+ M KL +P Y LI+G K ++AL +D+MV+
Sbjct: 437 IRVLCEEKRLSDAHVLFKNMIKL-GLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495
Query: 221 VKPDVVTFNILISGFCRNKK-FDLALGLFREMREKGCNPN--------------VVSFNT 265
V PDVVT+++LI+G ++ + + LF+ E+ N + S
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLA 555
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L++GF + +E + M++ +L+ G C G V+KA +RG
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P L+ L G A +V+ +L +L A LI+ L V+A
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALID-LNLNEGNVDAV 674
Query: 386 -GLMEKMLKEGILP 398
++ M K+G+LP
Sbjct: 675 LDVLHGMAKDGLLP 688
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 162/336 (48%), Gaps = 3/336 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ VN F + +ND L + M K D P V YN LI+G K EF+KA+ +
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFD--PDVYTYNSLISGMCKLGEFEKAIEILQQ 323
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+ VT+N LIS C+ + + A L R + KG P+V +FNTLI+G +
Sbjct: 324 MILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + M EM GC+ T IL+D LC E R+ +A L+ + G Y
Sbjct: 384 QDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNT 443
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC A E+ D++ G S + TLI+GL + ++ EAS LM++M+ EG
Sbjct: 444 LIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 503
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+N LL C VG A + ++ G +PD TY L+ G R R
Sbjct: 504 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVAS 563
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ + +G + YN + L +++ R
Sbjct: 564 KLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 154/299 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + YN+ +N V+ + + +MV + + DV TFN+LI C+ + A+
Sbjct: 120 KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAIL 179
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ EM G P+ ++F TL++GF E + + M +M+ GC ++V+ ++LV+G C
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EGRV +A V++ S G P + LV C GN AL++VD + +KG P V
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI G+ +L + +A ++++M+ P++VT+N L+ LC A L +
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 359
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KGL PD T++ L+ G + + EM ++G PD TY+ +D L R+
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 168/328 (51%), Gaps = 9/328 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR----PSVSIYNVLINGFVKCREFDKA 209
E F + F++ +N L M+K + G +VS+ VL+NGF K ++A
Sbjct: 193 EITFTTLMQGFIEEGDLNGAL----KMKKQMLGYGCLLTNVSV-KVLVNGFCKEGRVEEA 247
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L F + + PD VTFN L++GFCR + AL + M EKG +P+V ++N+LI G
Sbjct: 248 LRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISG 307
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+F++ + + +MI C ++VT L+ LC E + A +L +G+LP
Sbjct: 308 MCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPD 367
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ L++ LC N IA+E+ +E+ KG P + LI+ L R+ EA L++
Sbjct: 368 VCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLK 427
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M G ++V +N L++ LC R DA+ + G+ +TY+ L+ G +
Sbjct: 428 EMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNK 487
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYM 477
R +E L+++M+ EG PD TYNS +
Sbjct: 488 RVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 160/324 (49%), Gaps = 3/324 (0%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN F K R+ + L E + P +N L+NGF + + AL D M+
Sbjct: 235 VNGFCKEGRVEEALRFVLEVSEEGFS--PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PDV T+N LISG C+ +F+ A+ + ++M + C+PN V++NTLI E + +
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++A ++ G T L+ GLC A E+ + +G P +F Y L++
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC E AL ++ E+ G + + TLI+GL + R+ +A + ++M G+
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 472
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
SVT+N L++ LC R +A +L +GL PD TY+ L++ + R ++ ++V
Sbjct: 473 SVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQ 532
Query: 460 EMLDEGFIPDLATYNSYMDGLSNA 483
M G PD+ TY + + GL A
Sbjct: 533 TMASNGCEPDIFTYGTLIGGLCRA 556
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 147/316 (46%), Gaps = 2/316 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E ++++I + P+ YN LI+ K E + A +V + PDV TFN LI
Sbjct: 317 AIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQ 376
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C +K D+A+ +F EM+ KGC P+ +++ LI ER+ E + + EM GC
Sbjct: 377 GLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCAR 436
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
++V L+DGLC R+ A E+ GV Y L++ LC A +++
Sbjct: 437 NAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLM 496
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D++ +G P +L+ R+ +A +++ M G PD T+ L+ LC
Sbjct: 497 DQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRA 556
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR A +L KG+ Y+ ++ R KEG L EM+++ PD T+
Sbjct: 557 GRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTH 616
Query: 474 NSYMDGLSNARKSVRQ 489
GL N +++
Sbjct: 617 KIVFRGLCNGGGPIQE 632
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +N LI G + D A+ ++ M KPD T++ILI C ++ AL L
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM GC N V +NTLI G R+ ++ + +M LG SSVT L+DGLC
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A +L+ G+ P F Y L+ C G+ A ++V + G P +
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFT 545
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI GL R + AS L+ + +GI+ +N +++ L RT + RL
Sbjct: 546 YGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMM 605
Query: 428 TKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K PD +T+ I+ G +E + EML++G +P+ ++ +GL
Sbjct: 606 EKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGL 659
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 2/265 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C E + +++ R+ + L+ + M R +V +YN LI+G K R + A
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAV-VYNTLIDGLCKSRRIEDA 457
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+D+M V VT+N LI G C+NK+ + A L +M +G P+ ++N+L+
Sbjct: 458 EEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTY 517
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F ++ ++ M GCE T L+ GLC GRV A +L+ +G++
Sbjct: 518 FCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLT 577
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV-EASGLM 388
Y +++ L + + E+ +K + P + + GL + EA
Sbjct: 578 PHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFT 637
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDV 413
+ML++GILP+ +F L E LC +
Sbjct: 638 VEMLEKGILPEFPSFGFLAEGLCSL 662
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D T+ ++ SL R E +L + ++ C +++ ++
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESS----------GCARNAVVYNTLIDGLC 449
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
K+ R+ D F+ M L R SV+ YN LI+G K + ++A D+M+ + +KPD
Sbjct: 450 KSRRIEDAEEIFDQMELLGVSRSSVT-YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--------------- 270
T+N L++ FCR + A + + M GC P++ ++ TLI G
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568
Query: 271 --------------------FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
F ++ EG+ + EM+E ++T +I+ GLCN G
Sbjct: 569 VQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG 628
Query: 311 -VLKACELVIDFSRRGVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
+ +A + ++ +G+LP +F FG L E LC +E+++ + +K +
Sbjct: 629 PIQEAIDFTVEMLEKGILP-EFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE--RE 685
Query: 369 TTLIEGLRRLRK 380
T++I G ++RK
Sbjct: 686 TSMIRGFLKIRK 697
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 2/286 (0%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
L+ + FD ++ P+ TF LI F + + L + E
Sbjct: 60 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NEL 117
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G P+ +N + + K + +M+ G T +L+ LC ++ A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + + G+ P + + L++ EG+ AL++ ++ G L + ++ L+ G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + EA + ++ +EG PD VTFN L+ C +G DA + KG DPD
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+ L+SG + ++ ++ +M+ P+ TYN+ + L
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ L++++ G +P++ TF L++ + + L++L + G PD Y+I ++
Sbjct: 75 TTLLKQLKSSGSIPNATTFATLIQSFTNFHEI--ENLLKILENELGFKPDTNFYNIALNA 132
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+N+ K E L ++M++EG + D++T+N + L A +
Sbjct: 133 LVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQ 173
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 151/297 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y LING K A+ F M + +P VV ++ +I C++++ AL
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M KG +PN ++++LI G + E + + Y MI +T LVD LC
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG V+KA +V + + P Y L++ C G + V D + +KG +PSVI
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TTLI G +++ +A GL E+M ++G++PD+VT+N L+ LC VGR DA L
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G PD +TY IL + +R E L+ + PD+ Y+ MDG+ A
Sbjct: 396 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 452
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 141/274 (51%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D AL ++RM+R R P +V F+ L++ R K + L L+++M G N + N
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI F + ++ ++++LG + S+ T L+ GLC EG++ +A +L + G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y L+ LC GN A+ + + ++ P+V+ +T+I+ L + R+ EA
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ML +GI P++ T++ L+ LC +G +A RL + + PD +T++ LV
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E + +V+ M+ PD+ TYNS MDG
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 151/317 (47%), Gaps = 7/317 (2%)
Query: 177 FEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
F AM RK++ P +N L++ K KA D M++ +KPDVVT+N L+ G
Sbjct: 252 FYAMIHRKIM---PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C + + +F M KGC P+V+S+ TLI G+ + D+ + + EM + G
Sbjct: 309 HCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPD 368
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+VT L+ GLC+ GR+ A L + G +P Y L + LC A+ ++
Sbjct: 369 TVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK 428
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ P + + +++G+ R + A L K+ +G+ PD T+ ++ LC G
Sbjct: 429 VIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQG 488
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+A +L G P+ TY+++ G+ R N L EML GF D++T
Sbjct: 489 LLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTT 548
Query: 475 SYMDGLSN--ARKSVRQ 489
++ LS+ +SV+Q
Sbjct: 549 LLVEMLSDDGLDQSVKQ 565
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 1/315 (0%)
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ N ++D L F M ++ PS+ ++ L+ + + + L Y +M + +
Sbjct: 30 LNVNTIDDALSLFNRMLRM-RPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN 88
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
T NILI+ FC + A + ++ + G P+ +F TLIRG E K E + +
Sbjct: 89 TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M G + +T L++GLC G A + +R P Y +++ LC +
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + ++ KG P+ ++LI GL L EA L M+ I+PD +TFN
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ LC G V A + + L PD +TY+ L+ G+ + + N+ + M+ +
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 465 GFIPDLATYNSYMDG 479
G +P + +Y + ++G
Sbjct: 329 GCVPSVISYTTLING 343
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%)
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D AL LF M P++V F+ L+ + + +++ +M G ++ T I
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++ C+ R+ A ++ D + G P + L+ LC EG G AL++ D++ +G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P V+ TLI GL ++ A + M + P V ++ +++ LC + +A
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L KG+ P+ TY L+ G KE L M+ +PD T+N+ +D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Query: 481 SNARKSVR 488
V+
Sbjct: 275 CKEGMVVK 282
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 178 EAM--RKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
EAM K+I+G P + IY+++++G + E + A + ++ + PDV T+ I+I
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 481
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ A LF EM E GC+PN ++N + RGF + + + EM+ G
Sbjct: 482 NGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS 541
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
T +LV+ L ++G +++ +F +
Sbjct: 542 IDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N+ KA +++ F M P V Y++LI+GF K E +A Y +M+
Sbjct: 128 LNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+V T+N ++G R + A G++ EM GC+P+V++++TLI GF RK D+
Sbjct: 188 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH 247
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI GC ++VT L+ GLC E + +A EL RG P Y L+
Sbjct: 248 ELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGF 307
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A+EV DE+ KG+ P V+A L++G R K EA L + M+ PD+
Sbjct: 308 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDT 367
Query: 401 VTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V+ N +++ L R DA + + G PD +TY+ L+ G E R E +
Sbjct: 368 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 427
Query: 460 EMLDEGFIPDLATYNSYMDGLSNA 483
E+ PD +N ++ + A
Sbjct: 428 EIDRLKLSPDPHAFNVLLEAMYAA 451
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 4/339 (1%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDK 208
CP+M +N KA+++ + + M + I R S YN L+N K ++ +
Sbjct: 81 CPDMA-THSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQ 139
Query: 209 ALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A + MV +R V PDVV+++ILI GFC+ + A L+++M + C PNV ++N +
Sbjct: 140 AFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 199
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + + + EMI GC +T L+ G + +A EL RG
Sbjct: 200 NGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCR 259
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ LC E A E+ ++ ++G P + TTL+ G + K +A +
Sbjct: 260 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEV 319
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M+ +G PD V +NCLL+ G+ +A +L + ++ PD ++++I++ G ++
Sbjct: 320 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSK 379
Query: 448 ENRRKEGENLVNEM-LDEGFIPDLATYNSYMDGLSNARK 485
R + + M D G PDL TYNS + GL ++
Sbjct: 380 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
H + KA R++ L E M K P ++ +++LIN K + +A F M
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKR-GYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111
Query: 218 R--DRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGER 274
R ++N L++ C+ KK A +F M E+ P+VVS++ LI GF
Sbjct: 112 RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID 171
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +MI+L C + T ++GL +GR+ A
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA-------------------- 211
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+G V +E+ G P VI +TLI G RK +A L E M+
Sbjct: 212 --------QG-------VYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++VT+NCLL LC + +A L +G DPD +TY L+ G+ + ++
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +EM+ +G PD+ YN + G A K
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 347
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 37/294 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ F K + + ++ M L + P+V+ YN +NG ++ A G Y+ M
Sbjct: 160 YSILIDGFCKIDELGRAEKLYKQMIDL-NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 218
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PDV+T++ LI GF +K D A LF M +GC PN V++N L+ G E K
Sbjct: 219 ISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKP 278
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + +M+E GC+ VT L+ G CN G++ +A E+ + +G P Y L
Sbjct: 279 DEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 338
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-G 395
++ G G A ++ + + P ++ +I+GL + ++ +A + E+M ++ G
Sbjct: 339 LKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 398
Query: 396 ILPDSVT-----------------------------------FNCLLEDLCDVG 414
PD VT FN LLE + G
Sbjct: 399 CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 6/266 (2%)
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDEGVNM 282
V + + G C++ K + A R M+E + S T +I+ + D +++
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR--RGVLPKDFDYFGLVEKL 340
MI+ G T +L++ LC ++ +A E + +R F Y L+ L
Sbjct: 72 LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131
Query: 341 CGEGNAGIALEVVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C A + + ++ +P V++ + LI+G ++ + A L ++M+ +P+
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L L GR DA + + G PD +TY L+ G++ + + L
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFE 251
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
M+ G P+ TYN + GL K
Sbjct: 252 AMISRGCRPNAVTYNCLLHGLCKESK 277
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E RK+++ P Y L+ GF + ++A+ +D MV PDVV +N L+
Sbjct: 281 AHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 340
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL--GC 291
GF R K A LF+ M + C P+ VS N +I G ++ D+ V + +E +E GC
Sbjct: 341 GFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEV-FERMEQDHGC 399
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
VT L+ GLC E R+ +A ++ + R + P + L+E + G+
Sbjct: 400 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 287 IELGCEFSSVTCEILVDGLCNEGRV---LKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+E ++V + GLC G++ +AC + + P ++++LC
Sbjct: 3 VESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKA 62
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK--EGILPDSV 401
G AL +++ + K+G P + + LI L + K EA ++ M +
Sbjct: 63 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122
Query: 402 TFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++N LL LC + A + + S + + PD ++Y IL+ G+ + + E L +
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+D +P++ TYN++++GL
Sbjct: 183 MIDLNCVPNVTTYNAFLNGL 202
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 171/334 (51%), Gaps = 3/334 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
C ++ V+ A R + + L +AM K P+V++YN LI+G+ + +
Sbjct: 175 CAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGF--VPNVAVYNALIDGYCSTGDLEL 232
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ + M P+V T+ LI GFC++ K + A+ L+ M E G PNVV++ TLI+
Sbjct: 233 AIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQ 292
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G E + + + M G + TC +L+D LC GR+ +A + + ++G+
Sbjct: 293 GQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKV 352
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y +++ LC G A ++ ++ +G +P ++LI+GL R K +EA L+
Sbjct: 353 NQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLL 412
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
M++ G+ ++V F L++ R+ + + G+ PD +TY + + Y ++
Sbjct: 413 NDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQD 472
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
R ++ E+++ +M+D G P+L TYN+ + G +N
Sbjct: 473 GRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LIN + + A ++R + PD + + G+CR F A LF M
Sbjct: 77 YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMP 136
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++GC ++ L++G G E + + M GC S I+V GLC GR
Sbjct: 137 QRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAG 196
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L+ D +G +P Y L++ C G+ +A+++ + KG LP+V T LI
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + K A L +M++ G+ P+ VT+ L++ C G A RL GL
Sbjct: 257 CGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLA 316
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ T +L+ + R +E + + ++ +G + Y S +D L + K
Sbjct: 317 PNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGK 369
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 127/286 (44%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L+ G +A+ + M D PD ++I++ G C + A+ L +
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG PNV +N LI G+ + +++ M GC + T L+ G C G+V
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L G+ P Y L++ C EG+ A ++ + G P+ C LI
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + + EA + ++++GI + V + +++ LC G+ A L T+G
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
PD Y L+ G REN+ E +L+N+M++ G + + +D
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 118/298 (39%), Gaps = 16/298 (5%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
IY +I+ K +FD A +++ + PD ++ LI G CR K A+ L +M
Sbjct: 356 IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E G N V F LI E + D ++ M G + VT + + C +GR+
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A ++I GV P Y L++ G A + + G P+ + T L
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535
Query: 372 IEGLRR-------------LRKGVEA---SGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ L + L K V+ L+E+++K S ++C + L V R
Sbjct: 536 LGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDR 595
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+A + + L P Y ++ R KE ++ M+ ++P L +Y
Sbjct: 596 LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESY 653
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 81/230 (35%), Gaps = 35/230 (15%)
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N+ ++ TLI + ++ G S V G C G AC L
Sbjct: 73 NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +RG F Y L++ LCG G A+ V +W
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWP-------------------- 172
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+G PDS ++ ++ LC GR +A L A KG P+ Y
Sbjct: 173 ---------------DGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ L+ GY + ++ M +G +P++ TY + G + K R
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVER 267
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 26/288 (9%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y V I + + + A +M+ V+P++ T+N LI G+ A
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFS 515
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV----------------NMAYEMIELG 290
+ M + GC PN S+ L+ + + + V + E+I+L
Sbjct: 516 SLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQ 575
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE-----KLCGEGN 345
C +S + + L R+ +A ++ + P + Y ++E KL E
Sbjct: 576 CSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKE-- 633
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
AL +D + K+ LP + + +I L A + +L + D + +
Sbjct: 634 ---ALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKI 690
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
L++ L G T D RL + P Y L T + +E
Sbjct: 691 LIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 152/292 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY +LING+ + +AL D+M+ DVV +N +++G C+ K A L
Sbjct: 358 PDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL 417
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P+ +F TLI G E + +++ M + + VT IL+DG C
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCK 477
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA EL + R + P Y LV C G A + DE+ +KG P+++
Sbjct: 478 TTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVT 537
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C T+I+G R +A + KM+ EG+ PDS+T+N L+ A L
Sbjct: 538 CNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKME 597
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
TKGL PD +TY+++++G+ R+ R +E E ++ +M++ G PD +TY + ++G
Sbjct: 598 TKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 5/316 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFY 213
I+ +N + + M++ A E K+++ ++ + YN ++NG K + A +
Sbjct: 362 IYTILINGYCRNGMMSE---ALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D MV V PD TF LI G C+ AL LF M +K P++V++N LI GF
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKT 478
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ ++ + EMI + ++ ILV+G CN G V +A L + R+G+ P
Sbjct: 479 TEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTC 538
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ C G+ A E + ++ +G P I TLI G + +A L+ KM
Sbjct: 539 NTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMET 598
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD VT+N +L C GR +A+ + +G+DPD TY L++GY ++ KE
Sbjct: 599 KGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKE 658
Query: 454 GENLVNEMLDEGFIPD 469
+EML GF+PD
Sbjct: 659 AFRFHDEMLQRGFVPD 674
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 165/363 (45%), Gaps = 44/363 (12%)
Query: 157 FHFAVNAFVKANRMNDGLL--AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGF 212
++ +NA+ + +GLL AFE M + +P++ YN +ING K + +A G
Sbjct: 223 YNTLINAYCR-----EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKF------------------------------- 241
++ M+ + PD T+N L+ CRN F
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSR 337
Query: 242 ----DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
D AL FR+M+ G P+ V + LI G+ E + + +M+E GC V
Sbjct: 338 NGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
+++GLC + + A L + RGV+P + L+ C EGN G AL + +
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+K P ++ LI+G + + +A+ L +M+ I P+ +++ L+ C++G
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVS 517
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A RL KG+ P +T + ++ GY R + + + +M+ EG PD TYN+ +
Sbjct: 518 EAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLI 577
Query: 478 DGL 480
+G
Sbjct: 578 NGF 580
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 11/331 (3%)
Query: 157 FHFAVNAFVKANRMNDG---LLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE--FDKALG 211
+ VNA K ++++D L+ E D + YN LIN + CRE +A
Sbjct: 188 LNIMVNALCKDHKIDDVKPFLIDMEQKGIFAD----IVTYNTLINAY--CREGLLGEAFE 241
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M +KP + T+N +I+G C+ ++ A G+F EM G +P+ ++NTL+
Sbjct: 242 VMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESC 301
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
F E ++ +M+ G ++ L+ G + +A D G++P +
Sbjct: 302 RNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV 361
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ C G ALE+ D++ ++G V+A T++ GL + + +A+ L ++M
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
++ G++PD TF L+ C G A L + + K + PD +TY+IL+ G+ +
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEM 481
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
++ L NEM+ P+ +Y ++G N
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCN 512
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 161/334 (48%), Gaps = 7/334 (2%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK---LIDGRPSVSIYNVLINGFVKCRE 205
+C +F + ++V+A ++N+G F+ +R+ L+ S++ N L+ G VK
Sbjct: 110 TCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLV----SINACNSLLGGLVKMGW 165
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D A Y+ + R ++ +V T NI+++ C++ K D +M +KG ++V++NT
Sbjct: 166 VDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNT 225
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI + E E + M G + + T +++GLC +GR ++A + + G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y L+ + C N A ++ ++ +G P +I+ ++LI R +A
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
M G++PD+V + L+ C G +A +R +G D + Y+ +++G
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ + L +EM++ G +PD T+ + + G
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E +RK I +P++ N +I G+ + + KA F +M+ + V PD +T+N LI+GF +
Sbjct: 525 EMIRKGI--KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVK 582
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L +M KG P+VV++N ++ GF + + E + +MIE G + T
Sbjct: 583 GEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRST 642
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
L++G ++ + +A + +RG +P D
Sbjct: 643 YTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%)
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
L +KG L S+ AC +L+ GL ++ A + ++ + GI + T N ++ LC +
Sbjct: 141 LRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHK 200
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
D + KG+ D +TY+ L++ Y RE E ++N M +G P L TYN+
Sbjct: 201 IDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNA 260
Query: 476 YMDGLSNARKSVR 488
++GL + VR
Sbjct: 261 VINGLCKKGRYVR 273
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 14/331 (4%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+M D + A +RK+ + P+V IYN +I+G K A + M + PD+
Sbjct: 229 KMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDI 288
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N +I+GFC + ++ A L +EM E+ NP+VV+F+ LI F E KF E + E
Sbjct: 289 VTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDE 348
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ S+VT ++DG C + R+ A + +G P + L+ C
Sbjct: 349 MLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKR 408
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
++++ E+ + G + + I TTLI G ++ A L+++M+ G+ P+ VT N
Sbjct: 409 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNT 468
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYHILVSGYTRENRRKEG 454
LL+ LCD G+ DA + + + +K G++PD TY+IL+ G E + E
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L EM G +PD TY+S +DGL +
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSR 559
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 162/337 (48%), Gaps = 16/337 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F +NAFVK + + ++ M R +I PS Y+ +I+GF K D A +
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSII---PSTVTYSSMIDGFCKQNRLDAAEHMFY 382
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
PD++TFN LI+G+CR K+ D + L EM E G N +++ TLI GF
Sbjct: 383 LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG 442
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV---------IDFSR-- 323
+ ++ EMI G + VTC L+DGLC+ G++ A E+ ID SR
Sbjct: 443 DLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPF 502
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
GV P Y L+ L EG A E+ +E+ +G +P I +++I+GL + + E
Sbjct: 503 NGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A+ + + M + PD VTFN L+ C G D L +G+ D +TY L+
Sbjct: 563 ATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIY 622
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G+ + + ++ EM+ G PD T + + GL
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 160/299 (53%), Gaps = 5/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + L+ V+ D + + +M R+ + +F IL+ FC K AL
Sbjct: 79 PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P VV+FNTL+ G E + E +++ ++M C+ + VT L++GLC
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVI 366
EGRV++A L+ G+ P Y +V+ +C G+ AL ++ ++ + + +P+V+
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+I+GL + + +A L +M ++ I PD VT+NC++ C GR DA++L
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++PD +T+ L++ + +E + E E L +EML IP TY+S +DG +
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 12/339 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ ++ K R +D F M++ + P + YN +INGF + A
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEK-EIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++ PDVVTF+ LI+ F + KF A L+ EM + P+ V+++++I GF + +
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +M Y GC +T L+ G C RV +L+ + + G++ Y
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKML 392
L+ C G+ A +++ E+ G P+V+ C TL++GL +L+ +E M+K
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 393 KE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY ++ G
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++R E + + M + F PD+ T+N+ + G A
Sbjct: 554 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 6/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ +R+++ L F M K P+V + L+NG + +A+ DRM
Sbjct: 154 FNTLLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRM 208
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERK 275
+ D ++P+ +T+ ++ G C+ AL L R+M E PNVV +NT+I G + + +
Sbjct: 209 LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGR 268
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ N+ EM E VT +++G C GR A +L+ + R + P +
Sbjct: 269 HSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSA 328
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ EG A E+ DE+ + +PS + +++I+G + + A + +G
Sbjct: 329 LINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG 388
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD +TFN L+ C R D +L + GL + +TY L+ G+ + +
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 448
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L+ EM+ G P++ T N+ +DGL + K
Sbjct: 449 DLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 11/215 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P+V N L++G + AL + M + + V+PDV T+NILI G
Sbjct: 461 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLI 520
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L+ EM +G P+ ++++++I G + + DE M M V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVV 580
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+ G C G V EL + +RG++ Y L+ N AL++ E+
Sbjct: 581 TFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEM 640
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
G P I ++ GL + A ++E +
Sbjct: 641 ISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 134 FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL---IDG---- 186
IS+ CP + +C + ++ ++ D L F+AM+K ID
Sbjct: 454 MISSGVCP----NVVTCNTL-------LDGLCDNGKLKDALEMFKAMQKSKMDIDASRPF 502
Query: 187 ---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
P V YN+LI G + +F +A Y+ M + PD +T++ +I G C+ + D
Sbjct: 503 NGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A +F M K +P+VV+FNTLI G+ D+G+ + EM + G ++T L+
Sbjct: 563 ATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIY 622
Query: 304 GLCNEGRVLKACELVIDFSRRGVLP 328
G + A ++ + GV P
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYP 647
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 149/292 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY +LI GF + +AL D M+ DVVT+N +++G C+ K A L
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P+ +F TLI G+ + ++ V + MI+ + VT L+DG C
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ K EL D R + P Y L+ C G A + DE+ +KG ++I
Sbjct: 651 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C T+++G R V+A + ML +GI+PD +T+N L+ A L
Sbjct: 711 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 770
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD +TY+++++G++R+ R +E E ++ +M++ G PD +TY S ++G
Sbjct: 771 NSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA+E ++++ V++Y N++IN K ++ + F M V PDVVT+N LI
Sbjct: 341 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+ +CR + A L M KG P V ++N +I G K+ + EM+++G
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T IL+ C ++ A + + +GV+P + L+ L G AL+
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ G P + T LI G R EA + ++ML++G D VT+N +L LC
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+AD L + +G+ PD T+ L++GY ++ + L M+ PD+ T
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640
Query: 473 YNSYMDGL 480
YN+ +DG
Sbjct: 641 YNTLIDGF 648
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LING+ K +KA+ ++ M++ +KPDVVT+N LI GFC+ + + L
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M + PN +S+ LI G+ E + EM+E G E + +TC +V G C
Sbjct: 661 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +KA E + + +G++P Y L+ E N A +V+++ G LP VI
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ G R + EA +M KM++ G+ PD
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS-------------------------- 814
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++G+ +N KE + +EML GF+PD
Sbjct: 815 ---------TYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 5/334 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +NA+ + + + AFE M + +P V YN +ING K ++ +A G D
Sbjct: 396 YNTLINAYCRQGLLEE---AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 452
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ + PD T+NIL+ CRN A +F EM +G P++VSF+ LI
Sbjct: 453 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 512
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G +V IL+ G C G + +A ++ + +G Y
Sbjct: 513 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC E A E+ E+ ++G P TTLI G + +A L E M++
Sbjct: 573 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD VT+N L++ C + L ++ + P+ ++Y IL++GY E
Sbjct: 633 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 692
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L +EM+++GF + T N+ + G A +V+
Sbjct: 693 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 726
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 152/346 (43%), Gaps = 52/346 (15%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVR-------DRVKPDVVT----------FN 229
+ S+ ++ +I+ V+ R A RMVR + V+ V+T F+
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 292
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+L+ + + +K FR ++ KG ++ + N+L+ G D + E++
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 352
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + + T I+++ LC ++ + D +GV P Y L+ C +G A
Sbjct: 353 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 412
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
E++D + KG P V +I GL + K + A G++++MLK G+ PD+ T+N LL +
Sbjct: 413 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 472
Query: 410 LCDVGRTVDADR--------------------LRLLA---------------STKGLDPD 434
C +DA+R + LL+ GL PD
Sbjct: 473 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 532
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ Y IL+ G+ R E + +EML++G D+ TYN+ ++GL
Sbjct: 533 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 145 DGIFSCPEMERI---FHFAVNAFVKANRMNDGLL------------AFEAMRKLIDGRPS 189
DG EME++ ++ ++ + N ++ G+L AF ++++
Sbjct: 646 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 705
Query: 190 VSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+I N ++ G+ + KA F M+ + PD +T+N LI+GF + + D A L
Sbjct: 706 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 765
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G P+V+++N ++ GF + + E + +MIE G T L++G
Sbjct: 766 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 825
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
+ + +A + + +RG +P D
Sbjct: 826 QNNLKEAFRVHDEMLQRGFVPDD 848
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
LV+ + G P FD LV E L KG S+ AC +L+ GL
Sbjct: 277 LVLTYGNCGSNPLVFDL--LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 334
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
++ A + +++++ G+ + T N ++ LC + + KG+ PD +
Sbjct: 335 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVV 394
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
TY+ L++ Y R+ +E L++ M +G P + TYN+ ++GL K +R
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 17/365 (4%)
Query: 120 ASSYRFSE--LHSVLNFISANPCPCSNDGIFSCPEMERIFHFA--VNAFVKANRMNDGLL 175
ASS+R + L S + + P PC I F ++A VK + ++
Sbjct: 69 ASSFRNIDDALASFNHMLHREPLPC-------------IIQFTKLLSAIVKMGQYYGAVI 115
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
+ +L P + ++LI+ F + D A + +M++ ++PD VTFN LI+G
Sbjct: 116 SLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGL 175
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ KF A+ F + GC P V ++ T+I G + + +M E GC+ +
Sbjct: 176 CKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNV 235
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT IL+D LC + V +A ++ + + P F Y L++ LC A +++E
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ +P++ L++ + + K EA G+ + M + G+ PD VT++ L+
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
V+A +L TKG PD +Y+IL+ GY + R E + L NEM+ +G PD YN+
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 476 YMDGL 480
+ GL
Sbjct: 416 LIHGL 420
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 172/396 (43%), Gaps = 12/396 (3%)
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN 144
H Q F +F+ + + D TF ++ L +F++ + A+ C
Sbjct: 142 HLQRVDLAFSVFSKMIKL-GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQ--- 197
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
P + + +N K F+ M + +P+V YN+LI+ K +
Sbjct: 198 ------PTV-YTYTTIINGLCKIGETTAAAGLFKKMEE-AGCQPNVVTYNILIDSLCKDK 249
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
++AL + M R+ PD+ T+N LI G C +++ A L EM PN+ +FN
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFN 309
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L+ E K E + M E+G E VT L+ G +++A +L +
Sbjct: 310 VLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P F Y L++ C A ++ +E+ +G P + TLI GL +L + EA
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L + M G LPD T++ LL+ C G A RL + + L PD Y+IL+
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDA 489
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ K+ L +E+ +G +P++ Y + ++ L
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNL 525
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +NVL++ K + +A G + M V+PDVVT++ L+ G+ + A L
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL 362
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KGC P+ S+N LI+G+ ++ DE + EMI G +V L+ GLC
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ 422
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A +L + G LP F Y L++ C EG G A + + P +
Sbjct: 423 LGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ + + +A L ++ +G+LP+ + ++ +LC G +A
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G PD +Y++++ G+ + L+ EM D GF+ + T
Sbjct: 543 GDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 3/336 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ K +N+ L F M+ K I P + YN LI G R + +A +
Sbjct: 238 YNILIDSLCKDKLVNEALDIFSYMKAKRIS--PDIFTYNSLIQGLCNFRRWKEASALLNE 295
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P++ TFN+L+ C+ K A G+F+ M E G P+VV++++L+ G+ +
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + MI GC+ + + IL+ G C R+ +A +L + +G+ P + +Y
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G A ++ + GNLP + + L++G + +A L M
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +N L++ +C G DA +L +GL P+ Y +++ +E E
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL 535
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
M +G PD +YN + G + R +
Sbjct: 536 EAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQ 571
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ F K + F M+ +P +++YN+LI+ K A + +
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTY-LKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+V + +I+ C+ D AL FR M GC P+ S+N +IRGF +
Sbjct: 507 FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDE 566
Query: 277 DEGVNMAYEMIELG 290
+ EM + G
Sbjct: 567 SRAAQLIGEMRDRG 580
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 13/382 (3%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ +VR+L E SVL + C ++ V AF +A +
Sbjct: 159 TYNILVRALCGRGHRKEALSVLRDMRGA----------GCDPNAVTYNTLVAAFCRAGEV 208
Query: 171 NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + MR+ G +P++ +N ++NG K + A +D MV++ + PD V++N
Sbjct: 209 DRAERLVDMMRE--GGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYN 266
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+ G+C+ AL +F EM KG P+VV+F +LI + V + EM E
Sbjct: 267 TLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER 326
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + + +T L+DG C +G + A V + + + P Y L+ C G A
Sbjct: 327 GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEA 386
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
E+V E+ KG P V+ +T++ + A L ++ML+ G+LPD++T++ L+
Sbjct: 387 RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRV 446
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC+ R DA L + GL PD +TY L+ G+ +E + +L +EM+ G +PD
Sbjct: 447 LCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPD 506
Query: 470 LATYNSYMDGLSNARKSVRQTR 491
+ TY+ ++GLS + ++ R
Sbjct: 507 VVTYSVLINGLSKSARTKEAQR 528
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 164/332 (49%), Gaps = 2/332 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ VN KA RM D F+ M K VS YN L+ G+ K +AL + M
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVS-YNTLVGGYCKVGCSHEALSVFAEM 288
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R + PDVVTF LI C+ + A+GL REMRE+G N ++F LI GF +
Sbjct: 289 TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFL 348
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM + + S V L++G C GR+ +A ELV + +GV P Y +
Sbjct: 349 DDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTI 408
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G+ A ++ ++ + G LP I ++LI L ++ +A L + M+ G+
Sbjct: 409 LSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL 468
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+ L++ C G A L G+ PD +TY +L++G ++ R KE +
Sbjct: 469 QPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQR 528
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR-KSV 487
L+ ++ E +P Y++ M NA KSV
Sbjct: 529 LLFKLYHEEPVPANIKYDALMRCCRNAELKSV 560
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 146/296 (49%), Gaps = 9/296 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV YN ++ A F+D M+ D V P+V T+NIL+ C AL +
Sbjct: 121 PSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+MR GC+PN V++NTL+ F + D + M E G + + VT +V+G+C
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A ++ + + G+ P Y LV C G + AL V E+ +KG +P V+
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+LI + + A GL+ +M + G+ + +TF L++ C G DA LLA
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA----LLAV 355
Query: 428 TK----GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + P + Y+ L++GY R E LV EM +G PD+ TY++ +
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSA 411
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 145/303 (47%), Gaps = 15/303 (4%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ LI+GF K D AL M + R++P VV +N LI+G+C + D A L REM
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P+VV+++T++ + + +M+E G ++T L+ LC E R+
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLG 454
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L + G+ P + Y L++ C EGN AL + DE+ K G LP V+ + LI
Sbjct: 455 DAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLI 514
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL---------------LEDLCDVGRTV 417
GL + + EA L+ K+ E +P ++ ++ L L+ C G
Sbjct: 515 NGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMN 574
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+AD++ + + DG Y +L+ G+ RE + + +ML GF P+ + S +
Sbjct: 575 EADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLI 634
Query: 478 DGL 480
GL
Sbjct: 635 RGL 637
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 51/319 (15%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E F ++ F K ++D LLA MR+ +PSV YN LING+ D+A
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQ-CRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M VKPDVVT++ ++S +C+N A L ++M E G P+ +++++LIR E
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ + + MI LG + VT L+DG C EG V +A L + + GVLP Y
Sbjct: 451 KRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTY 510
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR--------LRKGVEAS 385
L+ L A ++ +L+ + +P+ I L+ R L KG
Sbjct: 511 SVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMK 570
Query: 386 GLM------------------------------------------EKMLKEGILPDSVTF 403
GLM ++ML+ G P+S +
Sbjct: 571 GLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTST 630
Query: 404 NCLLEDLCDVGRTVDADRL 422
L+ L + G V+AD++
Sbjct: 631 ISLIRGLFEKGMVVEADQV 649
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 9/274 (3%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P V+ +N ++ + A F M G PNV ++N L+R G E +++
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL-PKDFDYFGLVEKLC 341
+M GC+ ++VT LV C G V +A E ++D R G L P + +V +C
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA-ERLVDMMREGGLKPNLVTFNSVVNGIC 238
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A +V DE+ K+G P ++ TL+ G ++ EA + +M ++GI+PD V
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L+ +C G A L +GL + +T+ L+ G+ ++ + V EM
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Query: 462 LDEGFIPDLATYNSYMDG------LSNARKSVRQ 489
P + YN+ ++G + AR+ VR+
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 20/255 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+ D + F+ M L +P Y LI+G K ++AL +D MV+
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISL-GLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR------------ 268
V PDVVT+++LI+G ++ + A L ++ + P + ++ L+R
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLA 562
Query: 269 ---GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
GF + +E + +++ +L+ G C EG V+KA + G
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG-VEA 384
P L+ L +G A +V+ +L +L A LI+ L++G V+A
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALID--LNLKEGNVDA 680
Query: 385 S-GLMEKMLKEGILP 398
++ M ++G+LP
Sbjct: 681 VLDVLHGMARDGLLP 695
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 166/315 (52%), Gaps = 5/315 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ K +ND AF+ +++ P+V Y+ LI+GF + A+ +++M+
Sbjct: 204 IDGMCKDKHVND---AFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMIL 260
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ +KPDV TFNIL+ GFC++ K +F M ++G PNVV++ +L+ G+ ++ ++
Sbjct: 261 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 320
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ Y M + G + IL+DG C +V +A L + + ++P Y L++
Sbjct: 321 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G AL++VDE+ +G P +I +++++ L + + +A L+ K+ +GI P
Sbjct: 381 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ T+ L++ LC GR DA + KG + TY +++ G+ + E L+
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500
Query: 459 NEMLDEGFIPDLATY 473
++M D IPD TY
Sbjct: 501 SKMKDNSCIPDAVTY 515
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 154/288 (53%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G K E AL R+ + V+P+VV ++ +I G C++K + A L+ EM
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 224
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +PNVV+++ LI GFF + + +++ +MI + T ILVDG C +G++
Sbjct: 225 SKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 284
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ + ++G+ P Y L++ C A ++ + ++G P + + LI
Sbjct: 285 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILI 344
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G +++K EA L ++M + I+PD VT+N L++ LC +G+ A +L +G+
Sbjct: 345 DGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 404
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY ++ + ++ + L+ ++ D+G P++ TY +DGL
Sbjct: 405 PDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 161/310 (51%), Gaps = 4/310 (1%)
Query: 176 AFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +R+ +DG +P+V +Y+ +I+G K + + A Y MV + P+VVT++ LI
Sbjct: 181 ALDLLRR-VDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SGF + A+ LF +M + P+V +FN L+ GF + K EG + M++ G +
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L+DG C V KA ++ S+RGV P Y L++ C A+ +
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ K +P V+ +LI+GL +L K A L+++M G+ PD +T++ +L+ LC
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 419
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L +G+ P+ TY IL+ G + R ++ N+ ++L +G+ + T
Sbjct: 420 NHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNT 479
Query: 473 YNSYMDGLSN 482
Y + G N
Sbjct: 480 YTVMIHGFCN 489
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 6/309 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F ++ D + F M L + +P V +N+L++GF K + + + M++
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMI-LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 297
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+VVT+ L+ G+C K+ + A + M ++G NP++ S+N LI GF +K DE +
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM VT L+DGLC G++ A +LV + RGV P Y +++ L
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A+ ++ +L +G P++ T LI+GL + + +A + E +L +G
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLV 458
T+ ++ C+ G +A L LL+ K PD +TY I++ ++ + E L
Sbjct: 478 NTYTVMIHGFCNKGLFDEA--LALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL- 534
Query: 459 NEMLDEGFI 467
EM+ G +
Sbjct: 535 REMITRGLL 543
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 149/311 (47%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+N L F+ +L+ P+ + LI G + +AL F+D +V + D V +
Sbjct: 107 INPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYG 166
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI G C+ + AL L R + PNVV ++T+I G ++ ++ ++ EM+
Sbjct: 167 TLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK 226
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + VT L+ G G++ A +L + P + + LV+ C +G
Sbjct: 227 GISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG 286
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
V + K+G P+V+ +L++G +++ +A ++ M + G+ PD ++N L++
Sbjct: 287 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 346
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C + + +A L K + PD +TY+ L+ G + + LV+EM D G PD
Sbjct: 347 FCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 406
Query: 470 LATYNSYMDGL 480
+ TY+S +D L
Sbjct: 407 IITYSSILDAL 417
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 51/328 (15%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP---------- 258
A + R++R P + FN ++ ++K + L L ++M +G NP
Sbjct: 60 AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQ 119
Query: 259 ------NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
N ++F TLI+G + + + + ++ +G + V L+ GLC G
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ V P Y +++ +C + + A ++ E+ KG P+V+ + LI
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD-------------- 418
G + + +A L KM+ E I PD TFN L++ C G+ +
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 419 ---------------------ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
A + S +G++PD +Y+IL+ G+ + + E NL
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARK 485
EM + IPD+ TYNS +DGL K
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGK 387
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDK 208
P+++ ++ ++ F K ++++ + F+ M + +I P V YN LI+G K +
Sbjct: 335 PDIQS-YNILIDGFCKIKKVDEAMNLFKEMHHKHII---PDVVTYNSLIDGLCKLGKISY 390
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL D M V PD++T++ ++ C+N + D A+ L +++++G PN+ ++ LI
Sbjct: 391 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + ++ N+ +++ G + T +++ G CN+G +A L+ +P
Sbjct: 451 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510
Query: 329 KDFDYFGLVEKL 340
Y ++ L
Sbjct: 511 DAVTYEIIIRSL 522
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 172/339 (50%), Gaps = 7/339 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P +N+ NR++ AF A+ K++ +P + + LI G +
Sbjct: 74 FGIPPDVYTLAIVINSLCHLNRVD---FAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+M+ + +P+VVT+ LI+G C++++ A +F EM KG +PN+V++N+
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G ++ + EM++ T +VD LC EG V +A ++V RG
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P Y L++ C +A++V D + K + +VI+ TLI G +++ +A
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L E+M ++ + P++VT+N L+ LC VGR DA L +G PD +TY L S Y
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL-SDY 369
Query: 446 TRENRR-KEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+NR + L+ + + PD+ Y + +DG+ A
Sbjct: 370 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
M +++D + P V N +++ K +A D M+ V+P+VVT+N L+ G C
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D+A+ +F M K C NV+S+NTLI G+ + D+ + + EM ++VT
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 327
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ GR+ A L + RG +P Y L + LC + A+ ++ +
Sbjct: 328 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + TT+++G+ R + +A L + +G+ P+ T+N ++ LC G
Sbjct: 388 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 447
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L + G P+ TY+++ G+ R N L+ EML GF D++T +
Sbjct: 448 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 507
Query: 478 DGLSN--ARKSVRQ 489
LS+ +SV+Q
Sbjct: 508 GMLSDDGLDQSVKQ 521
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 3/329 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N K ++ + F M + G P++ YN LI+G K E+ + MV
Sbjct: 157 INGLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 214
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ PDV T N ++ C+ A + M +G PNVV++N L+ G + D
Sbjct: 215 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 274
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + M+ C + ++ L++G C V KA L + SR+ + P Y L+
Sbjct: 275 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 334
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A+ + E+ +G +P ++ TL + L + R +A L++ + PD
Sbjct: 335 LCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 394
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ +L+ +C G DA L S+KGL P+ TY+I++ G ++ E L +
Sbjct: 395 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 454
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSVR 488
EM G P+ TYN G +++R
Sbjct: 455 EMNKNGCSPNDCTYNLITRGFLRNNEALR 483
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 13/296 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V N+LIN F R A ++++ +PDVVT+ L++G C+
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------- 663
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M KG +P++ ++N+LI ++ + EM+ + V +VD LC
Sbjct: 664 ---MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + A ++V +RGV P Y L++ C A++V D + KG +P+V +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G ++++ +A GL+E+M +G++ D+VT+N L+ LC VGR A L
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G PD +TY IL+ + + E L+ + D+ YN +DG+ A
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 896
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 133/274 (48%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D+AL ++RM+ + P V FN L++ + K L L R+M G P+V +
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I + D + ++++LG + + T L+ GLC EG++ +A L G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y L+ LC + A + E+ KG P+++ +LI GL +L + +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
LM +M+ I+PD T N +++ LC G +A + + +G++P+ +TY+ L+ G+
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
N + + M+ + + ++ +YN+ ++G
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 299
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 37/333 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS +N L+ K + L +M + PDV T I+I+ C + D A
Sbjct: 43 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ + G P+ +F TLIRG E K E +++ +MI G + + VT L++GLC
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGL------------------------------- 336
+ +V +A + + +G+ P Y L
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222
Query: 337 ----VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE-ASGLMEKM 391
V+ LC EG A +VVD + +G P+V+ L++G LR V+ A + + M
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG-HCLRNEVDVAVKVFDTM 281
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ + + + +++N L+ C + A L S + L P+ +TY+ L+ G R
Sbjct: 282 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRL 341
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++ +L +EM+ G IPDL TY + D L R
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNR 374
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI+ E+ + MV ++ P+VV F+ ++ C+ +A +
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 730
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G P+VV++ L+ G + DE V + M+ GC + + IL++G C
Sbjct: 731 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 790
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ KA L+ S +G++ Y L+ LC G A+ + E+ G +P ++
Sbjct: 791 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 850
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + EA L++ + + D + +N ++ +C G A L S
Sbjct: 851 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 910
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+KGL PD TY+I++ G + E L +M DE I
Sbjct: 911 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM-DENDI 949
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 137/297 (46%), Gaps = 22/297 (7%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D AL ++RM+ P V F L++ + K + L L +M G P+V + N
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC---NEG------------- 309
LI F R+ ++ ++++LG + VT L++GLC +G
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIH 681
Query: 310 RVLKACE------LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
+ CE L+ + ++P + +V+ LC EG IA +VVD + K+G P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ T L++G + EA + + M+ +G +P+ ++N L+ C + R A L
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 801
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
S +GL D +TY+ L+ G R + L +EM+ G IPDL TY +D L
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 858
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V Y L++G E D+A+ +D MV P+V ++NILI+G+C+ ++ D A+G
Sbjct: 740 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 799
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M +G + V++NTLI G + + + +EM+ G VT IL+D LC
Sbjct: 800 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 859
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +A L+ + Y ++ +C G A ++ L KG P V
Sbjct: 860 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVR 919
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+I GL + EA+ L KM + I +S +
Sbjct: 920 TYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
AL + + K PS + L+ + + + L +M GI PD T ++
Sbjct: 29 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 88
Query: 409 DLCDVGRTVDADRLRLLASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC + R VD L K G PD T+ L+ G E + E +L ++M+ EGF
Sbjct: 89 SLCHLNR-VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147
Query: 468 PDLATYNSYMDGLSNARK 485
P++ TY + ++GL R+
Sbjct: 148 PNVVTYGTLINGLCKDRQ 165
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 40/176 (22%)
Query: 150 CPEMERIFHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C R ++ +N + + RM+ GLL +++ LI YN LI+G
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI---ADTVTYNTLIHGLCHVGRLQ 830
Query: 208 KALGFYDRMVRDRVKPDVVTF-----------------------------------NILI 232
A+ + MV PD+VT+ NI I
Sbjct: 831 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 890
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
G CR + + A LF + KG P+V ++N +I G DE + +M E
Sbjct: 891 DGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 171 NDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N L + K I+G + +YN+ I+G + E + A + + ++PDV T
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+NI+I G C+ D A LFR+M E N S
Sbjct: 921 YNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 2/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN +ING + DKA+ DRMV + P+ VT+ LI+G + + + L
Sbjct: 275 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 334
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ E+G + N +++TLI G F E K +E + + +M+E GC+ + V L+DGLC
Sbjct: 335 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 394
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ +A E++ + +G P F Y L++ GN+ A+ V E+ K +P+ I
Sbjct: 395 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 454
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+ LI GL K EA + ML G+ PD V ++ ++ LC+ G +L +L
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY+IL+ ++N +L+N MLD G PDL T N +++ L
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 201/400 (50%), Gaps = 15/400 (3%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
IF AS + S++ +TF ++ + A+S F L V + + +F +
Sbjct: 49 QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMK------RERRVF----I 98
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E+ F A+ KA+ + F M R +V +N ++N ++ F +AL FY
Sbjct: 99 EKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY 158
Query: 214 DRMV--RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ V + + P+V++FN++I C+ D A+ +FREM + C P+V ++ TL+ G
Sbjct: 159 ECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLC 218
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + DE V + EM GC SSVT +L++GLC +G +++ +LV + +G +P +
Sbjct: 219 KEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEV 278
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y ++ LC +G A+ ++D + +P+ + TLI GL + + V+ L+ +
Sbjct: 279 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 338
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G + ++ L+ L ++ +A L KG P+ + Y L+ G RE +
Sbjct: 339 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 398
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL---SNARKSVR 488
E + ++ EM+++G P+ TY+S + G N++K++R
Sbjct: 399 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 438
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A K ++ + F M + P V Y L++G K D+A+ D M
Sbjct: 175 FNLVIKAMCKLGLVDRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 233
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VTFN+LI+G C+ L M KGC PN V++NT+I G + K
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ V++ M+ C + VT L++GL +GR + L+ RG ++ Y L
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L E + A+ + ++ +KG P+++ + LI+GL R K EA ++ +M+ +G
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P++ T++ L++ G + A R+ + P+ + Y +L+ G + + +E
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 473
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ ML G PD+ Y+S + GL NA
Sbjct: 474 MWTHMLGRGLRPDVVAYSSMIHGLCNA 500
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 69/362 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ T+ I+ L + + S+L+ + A+ C ND + +N VK
Sbjct: 276 NEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC-VPNDVTYGT---------LINGLVKQ 325
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R DG+ ++ + + Y+ LI+G K + ++A+G + +MV +P++V
Sbjct: 326 GRSVDGVHLLSSLEER-GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 384
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++ LI G CR K D A + EM KGC PN ++++LI+GFF + + + EM
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ C + + +L+ GLC +G++ +A + RG+ P Y ++ LC G+
Sbjct: 445 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 504
Query: 348 IALEVVDELW-------------------------------------KKGNLPSVIACTT 370
+ L++ +E+ +G P +I C
Sbjct: 505 VGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNI 564
Query: 371 LIEGLR------------------RLRKG---VEASGLMEKMLKEGILPDSVTFNCLLED 409
+ LR RL K V A+ ++E ML++ + P++ T+ ++ +
Sbjct: 565 FLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPE 624
Query: 410 LC 411
LC
Sbjct: 625 LC 626
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K I P+ ++FN +++ +C +G A + + + +PD TY L+ G +E+R
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L++EM EG P T+N ++GL VR T+
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 263
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 181/394 (45%), Gaps = 13/394 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F F WA +RH F ++ L+ + V+ + P
Sbjct: 110 FEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRR----------GMPR 159
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALG 211
R F + ++ +A ++ + + M+K DG P + I N+ +N V DKAL
Sbjct: 160 GTRQFAHLMLSYSRAGKLRSAMRVLQLMQK--DGCAPDICICNMAVNVLVVAGRIDKALE 217
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F +RM R V PDVVT+N LI G C ++ AL + M + GC P+ +S+ T++
Sbjct: 218 FAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLC 277
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E++ + N+ M + G VT +L+ GL G +A + + + +
Sbjct: 278 KEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEV 337
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y V C G A E++ E+ KG P V+ + +++G R+ + +A +M+ M
Sbjct: 338 GYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM 397
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
K G P++VT LL LC VG++ +A L + + P +TY +++ G+ RE +
Sbjct: 398 YKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKL 457
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE ++V +ML +GF P N + L N RK
Sbjct: 458 KESCDVVMQMLQKGFFPTTVEINLLIHALCNERK 491
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 38/342 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKL-IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I + AVN V A R++ L E MR++ +D P V YN LI G R AL
Sbjct: 198 ICNMAVNVLVVAGRIDKALEFAERMRRVGVD--PDVVTYNCLIKGLCGARRIVDALEMIS 255
Query: 215 RMVR-----DRVK------------------------------PDVVTFNILISGFCRNK 239
M++ D++ PD VT+N+LI G ++
Sbjct: 256 SMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHG 315
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL RE K + V ++ + F + E + EMI GC VT
Sbjct: 316 HADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYS 375
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+VDG C G + +A +++ + G P + L+ LC G + A E++++ ++
Sbjct: 376 AVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEE 435
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
PS I + ++ G RR K E+ ++ +ML++G P +V N L+ LC+ + DA
Sbjct: 436 WWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADA 495
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+KG + + + ++ G++R+ + +L+++M
Sbjct: 496 KDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDM 537
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 154/328 (46%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ V++F RM + A E + ++I RP V Y+ +++GF + E D+A
Sbjct: 339 YSATVHSFCLNGRMAE---AKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMK 395
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++ KP+ VT L++G C+ K A L + E+ P+ ++++ ++ GF E
Sbjct: 396 HMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREG 455
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E ++ +M++ G ++V +L+ LCNE + A + + +G ++
Sbjct: 456 KLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFT 515
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ +G+ AL ++D+++ P V+ T +++ L R K EA+ L+EKML
Sbjct: 516 TVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNR 575
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P VT+ ++ C+ G D L LL + Y+ ++ + E
Sbjct: 576 GLHPTPVTYRTVIHRYCEKGAV--EDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEA 633
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
NL++++L D T + MD N
Sbjct: 634 NNLLSKVLRTASKRDAQTCHILMDSFLN 661
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +++ ++ + R D A M+R + F L+ + R K A+
Sbjct: 123 RHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMR 182
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + M++ GC P++ N + + D+ + A M +G + VT L+ GLC
Sbjct: 183 VLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLC 242
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R++ A E++ + G LP YF ++ LC E +++ + G P +
Sbjct: 243 GARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQV 302
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI GL + EA + + + D V ++ + C GR +A +
Sbjct: 303 TYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEM 362
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+KG PD +TY +V G+ R + ++ M G P+ T+ + ++GL KS
Sbjct: 363 ISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKS 422
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 152/399 (38%), Gaps = 81/399 (20%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
+Q+T + L+H L H + F S FR D + V S + R +
Sbjct: 300 DQVTYNMLIHGLAKHGHADEALS------FLRESEGKRFRVDEVGYSATVHSFCLNGRMA 353
Query: 127 ELHSVLNFISANPC-------PCSNDGIFSCPEMER-----------------IFHFAV- 161
E ++ + + C DG E+++ + H A+
Sbjct: 354 EAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALL 413
Query: 162 NAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
N K + ++ A+E + K + PS Y+V+++GF + + ++ +M++
Sbjct: 414 NGLCKVGKSSE---AWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQK 470
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--------- 270
P V N+LI C +K A + + KGC NVV+F T+I GF
Sbjct: 471 GFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESA 530
Query: 271 -------------------------FGER-KFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
G + K E ++ +M+ G + VT ++
Sbjct: 531 LSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHR 590
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFD--YFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
C +G A E +++ + + + F Y ++EKLC G A ++ ++ + +
Sbjct: 591 YCEKG----AVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASK 646
Query: 363 PSVIACTTLIEGLRRLRKG--VEASGLMEKMLKEGILPD 399
C L++ L +G +++ + +M + ++PD
Sbjct: 647 RDAQTCHILMDSF--LNRGLPLQSYNVACRMFQRNLIPD 683
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
D WK + P V ++ L R R A +M M++ G+ + F L+
Sbjct: 116 ADRQWKYRHAPEVF--DEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSR 173
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+ A R+ L G PD ++ V+ R + M G PD+ T
Sbjct: 174 AGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVT 233
Query: 473 YNSYMDGLSNARKSV 487
YN + GL AR+ V
Sbjct: 234 YNCLIKGLCGARRIV 248
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ +A ++M+ + P VT+ +I +C + L L +M K + ++N
Sbjct: 561 KMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS--AYN 618
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+I K E N+ +++ + + TC IL+D N G L++ + +R
Sbjct: 619 QVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQR 678
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIAL 350
++P D KLC + ++ +AL
Sbjct: 679 NLIP-DL-------KLCQKVDSQLAL 696
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 2/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN +ING + DKA+ DRMV + P+ VT+ LI+G + + + L
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 350
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ E+G + N +++TLI G F E K +E + + +M+E GC+ + V L+DGLC
Sbjct: 351 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 410
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ +A E++ + +G P F Y L++ GN+ A+ V E+ K +P+ I
Sbjct: 411 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 470
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+ LI GL K EA + ML G+ PD V ++ ++ LC+ G +L +L
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY+IL+ ++N +L+N MLD G PDL T N +++ L
Sbjct: 531 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 204/406 (50%), Gaps = 15/406 (3%)
Query: 88 FTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI 147
F + +IF AS + S++ +TF ++ + A+S F L V + + +
Sbjct: 59 FLQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMK------RERRV 112
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F +E+ F A+ KA+ + F M R +V +N ++N ++ F
Sbjct: 113 F----IEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFH 168
Query: 208 KALGFYDRMV--RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL FY+ V + + P+V++FN++I C+ D A+ +FREM + C P+V ++ T
Sbjct: 169 RALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCT 228
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G E + DE V + EM GC SSVT +L++GLC +G +++ +LV + +G
Sbjct: 229 LMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG 288
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P + Y ++ LC +G A+ ++D + +P+ + TLI GL + + V+
Sbjct: 289 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 348
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+ + + G + ++ L+ L ++ +A L KG P+ + Y L+ G
Sbjct: 349 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL---SNARKSVR 488
RE + E + ++ EM+++G P+ TY+S + G N++K++R
Sbjct: 409 CREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIR 454
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A K ++ + F M + P V Y L++G K D+A+ D M
Sbjct: 191 FNLVIKAMCKLGLVDRAIEVFREM-AIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEM 249
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VTFN+LI+G C+ L M KGC PN V++NT+I G + K
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ V++ M+ C + VT L++GL +GR + L+ RG ++ Y L
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L E + A+ + ++ +KG P+++ + LI+GL R K EA ++ +M+ +G
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P++ T++ L++ G + A R+ + P+ + Y +L+ G + + +E
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 489
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ ML G PD+ Y+S + GL NA
Sbjct: 490 MWTHMLGRGLRPDVVAYSSMIHGLCNA 516
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 69/362 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ T+ I+ L + + S+L+ + A+ C ND + +N VK
Sbjct: 292 NEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC-VPNDVTYGT---------LINGLVKQ 341
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R DG+ ++ + + Y+ LI+G K + ++A+G + +MV +P++V
Sbjct: 342 GRSVDGVHLLSSLEER-GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 400
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++ LI G CR K D A + EM KGC PN ++++LI+GFF + + + EM
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ C + + +L+ GLC +G++ +A + RG+ P Y ++ LC G+
Sbjct: 461 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 520
Query: 348 IALEVVDELW-------------------------------------KKGNLPSVIACTT 370
+ L++ +E+ +G P +I C
Sbjct: 521 VGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNI 580
Query: 371 LIEGLR------------------RLRKG---VEASGLMEKMLKEGILPDSVTFNCLLED 409
+ LR RL K V A+ ++E ML++ + P++ T+ ++ +
Sbjct: 581 FLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPE 640
Query: 410 LC 411
LC
Sbjct: 641 LC 642
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K I P+ ++FN +++ +C +G A + + + +PD TY L+ G +E+R
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E L++EM EG P T+N ++GL VR T+
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 279
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y +I+GF K A +D M R ++ PD+VT+ +I G C++ K A +
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG P+ V++ LI G+ + E ++ +M++ G + VT L DGLC
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A EL+ + SR+G+ P + Y +V LC GN +++++E+ G P I
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ ++ + +A L+ ML + + P VTFN L+ C G D +RL
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ T++ L+ Y +N + + M D G +PD TYN + G AR
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKAR 641
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 147/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P IYN +I K E +A M + V PD V + +ISGFC+ A
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EMR K P++V++ ++I G K E M EM+ G E VT L+DG C
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A + ++G+ P Y L + LC G +A E++ E+ +KG P+V
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T++ GL ++ + LME+M G PD++T+ L++ C +G A L +
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
K L P +T+++L++G+ ++GE L+ ML++G +P+ T+NS M
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 3/320 (0%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ K+ +M + F M L+ G P Y LI+G+ K E +A +++MV+
Sbjct: 388 VIHGICKSGKMVEAREMFNEM--LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ 445
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+VVT+ L G C+N + D+A L EM KG PNV ++NT++ G ++
Sbjct: 446 KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQ 505
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V + EM G ++T L+D C G + KA EL+ + + P + L+
Sbjct: 506 TVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C G +++ + +KG +P+ +L++ + + + M G++P
Sbjct: 566 GFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP 625
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
DS T+N L++ C +A L KG TY L+ G+ + + E L
Sbjct: 626 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685
Query: 459 NEMLDEGFIPDLATYNSYMD 478
EM G + + Y+ ++D
Sbjct: 686 EEMRKHGLVAEKDIYDIFVD 705
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 7/290 (2%)
Query: 193 YNVLI-NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF-CRNKKFDLALGLFRE 250
+ VL+ NGFV +A + +++R V V + N+ +S C + +A+ +F E
Sbjct: 178 FQVLVENGFVL-----EAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEE 232
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
E G N VS N ++ K E N+ +M + G V+ ++V G C G
Sbjct: 233 FPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGE 292
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ K +LV + +G+ P ++ Y ++ LC G A +++ + K G P + TT
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+I G +L A L ++M ++ I+PD VT+ ++ +C G+ V+A + KG
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+PD +TY L+ GY + KE ++ N+M+ +G P++ TY + DGL
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 4/210 (1%)
Query: 278 EGVNMAYEMIE----LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
EG+ +A ++ E LG +++V+C I++ LC G+V +A L++ + RG P Y
Sbjct: 221 EGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSY 280
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+V C G L++VDEL KG P +I L + + VEA L+ M K
Sbjct: 281 GVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRK 340
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD+V + ++ C +G A +L K + PD +TY ++ G + + E
Sbjct: 341 WGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVE 400
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ NEML +G PD TY + +DG A
Sbjct: 401 AREMFNEMLVKGLEPDEVTYTALIDGYCKA 430
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+M + A E +R +++ R P++ +NVL+NGF + + M+ + P+
Sbjct: 534 KMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNAT 593
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFN L+ +C +++ M ++G P+ ++N LI+G R E + EM
Sbjct: 594 TFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E G ++ T + L+ G + ++A +L + + G++ + Y V+ EGN
Sbjct: 654 VEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNW 713
Query: 347 GIALEVVDEL 356
I LE+ DE
Sbjct: 714 EITLELCDEF 723
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 3/166 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N F + + DG E M L G P+ + +N L+ + Y
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWM--LEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKA 617
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD T+NILI G C+ + A L +EM EKG + +++ LIRGF+ +K
Sbjct: 618 MHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKK 677
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
F E + EM + G +I VD EG EL +F
Sbjct: 678 FVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEF 723
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N ++ D + F+ + K+ PS+ Y +I G K AL +M
Sbjct: 144 FGTLLNGLCSKAKIIDAVKLFDEIGKM-GFAPSLITYTTIIKGLCKIGHTTNALQLLKKM 202
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPDVV +N +I C++++ + A+ F EM ++G PNVV++++++ GF +
Sbjct: 203 EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL 262
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E ++ +MI ++VT ILVDGLC EG +L+A + + GV P + Y L
Sbjct: 263 NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C + A ++ D + KG PSV LI G + R+ EA L+ +M +
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+VT++ L++ C GR A +L + GL PD +TY IL+ G + E
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M + P + YN + G+ N K
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGK 471
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 153/300 (51%), Gaps = 2/300 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK--FDLAL 245
P V ++N L+ VK + + + +M ++P+V T ILI+ C + + A
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+M + G P V+F TL+ G + K + V + E+ ++G S +T ++ GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G A +L+ +G P Y +++ LC + A A+ E+ +G P+V
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ ++++ G L + EA+ L ++M+ ++P++VTF L++ LC G ++A R+ +
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G++PD TY L+ GY +++ E + L + M+ +GF P + YN ++G +R+
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +++ K R N+ + F M +D P+V Y+ +++GF + ++A +
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEM---VDQGIPPNVVTYSSILHGFCNLGQLNEATSLFK 270
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ V P+ VTF IL+ G C+ A +F M E G P+ +++ L+ G+ +
Sbjct: 271 QMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQS 330
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE + M+ G S IL++G C R+ +A L+ + R + P Y
Sbjct: 331 QMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYS 390
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C G +A ++ E+ G LP I + L++GL + EA L++ M +
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES 450
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I P +N L++ +C+ G+ A L KG+ P +TY +++SG +E E
Sbjct: 451 KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +M+ G +P+ TYN + G
Sbjct: 511 CEMFRKMVVNGCLPNSCTYNVAIQGF 536
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 3/306 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGF--YDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
RP+V +LIN F +M + ++P VTF L++G C K A
Sbjct: 101 RPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDA 160
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ LF E+ + G P+++++ T+I+G + + +M E GC+ V ++D
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC + R +A + +G+ P Y ++ C G A + ++ + +P+
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPN 280
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ T L++GL + +EA + E M + G+ PD+ T++ L++ C + +A +L
Sbjct: 281 TVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA- 483
+ KG P Y+IL++G+ + R E + L++EM D PD TY++ M G A
Sbjct: 341 IMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG 400
Query: 484 RKSVRQ 489
R V Q
Sbjct: 401 RPQVAQ 406
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 29/390 (7%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+ A+ + IDS D R+ + Y FSE+ + GI P
Sbjct: 211 VVAYNTVIDSLCKDR-------RANEAMYFFSEM--------------VDQGI---PPNV 246
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ ++ F ++N+ F+ M R ++ P+ + +L++G K +A
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVM---PNTVTFTILVDGLCKEGMILEARRV 303
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++ M + V+PD T++ L+ G+C + D A LF M KG P+V +N LI G
Sbjct: 304 FEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCK 363
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
R+ +E + EM + +VT L+ G C GR A +L + G+LP
Sbjct: 364 SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC G+ A ++ + + P + LI+G+ K A L +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+GI P VT+ ++ L G + +A + G P+ TY++ + G+ R
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPS 543
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ EM+ GF D +T+ +D SN
Sbjct: 544 NAVRLIEEMVGRGFSADSSTFQMLLDLESN 573
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 210/469 (44%), Gaps = 20/469 (4%)
Query: 22 PAPSIPLPSRPETPPVTLPSVTLTPTAHH-THLLRFLKTHLLTPTNNQITPSSLLHFLKS 80
P SI L P PV+ ++ T H R + H + + +TPS + L +
Sbjct: 16 PFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLN 75
Query: 81 KLHHHPQ-----FTHY-----DFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS 130
LH PQ H+ D A I + L ++R + +
Sbjct: 76 -LHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIRE 134
Query: 131 VLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV 190
+ F++A S D + + +F + + + NR ++ F M++ P++
Sbjct: 135 IFEFLAA-----SRDRLGFKSSI--VFDYLIKSCCDMNRADEAFECFYTMKEK-GVLPTI 186
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
N L++ F+K + A Y M R R+K V TFNI+I+ C+ K A
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M G PN+V++NT++ G+ + + + M E S T L+ G+C +GR
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A ++ + ++G+ P Y L++ C +GN +A DE+ KKG P++ +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI L ++ EA +++++ ++GI PD++T+N L+ C A L G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ P TY L+ +++NR KE ++L ++ EG +PD +N+ +DG
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDG 475
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 35/329 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN +++G+ + A M R +++PD T+ LISG C+ + + A
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EM +KG P+ V +NTLI GF + D EM++ G + T L+ L
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R +A ++ + +G+ P Y L+ C NA A + DE+ G P+
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS-------------------------- 400
T+L+ L + + EA L +K+ EG+LPD+
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 401 ---------VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
VTFN +++ C G+ +A L +G+ PD ++++ L+SGY+R
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K+ + NEMLD GF P + TYN+ + GL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K R+ + FE M + G RPS IYN LI+GF D A + D M++
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQ--KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P + T+N LI ++ D A + +E++EKG +P+ +++N LI G+ +
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM+ G + + T L+ L + R+ +A +L + GVLP + L++
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDG 475
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C N A E++ ++ + P + T+++G R K EA L ++M + GI PD
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
++FN L+ G DA R+R G +P +TY+ LV G + E L+
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 460 EMLDEGFIPDLATYNSYMDGLS 481
EM+ +G PD TY + ++G++
Sbjct: 596 EMVSKGMTPDDTTYFTLIEGIA 617
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 3/255 (1%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N+ + A M E M K I + P YN+LING+ +C KA +D M+
Sbjct: 365 NSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLA 424
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KP T+ L+ + + A LF+++ +G P+ + FN LI G
Sbjct: 425 SGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKG 484
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +M + VT ++ G C EG+V +A EL + RRG+ P + L+
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ A V +E+ G P+V+ L++GL + ++G A L+++M+ +G+ P
Sbjct: 545 GYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604
Query: 399 DSVTFNCLLEDLCDV 413
D T+ L+E + V
Sbjct: 605 DDTTYFTLIEGIAKV 619
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 218 RDRVK-PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
RDR+ + F+ LI C + D A F M+EKG P + + N+L+ F +
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM L + S T I+++ LC EG++ KA KDF
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA--------------KDF----- 243
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V + G P+++ T++ G + A ++ M ++ I
Sbjct: 244 ----------------VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PDS T+ L+ +C GR +A ++ KGL P + Y+ L+ G+ +
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+EML +G P ++TYNS + L
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHAL 371
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%)
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
SS+ + L+ C+ R +A E +GVLP L+ A +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+++ SV +I L + K +A + M G+ P+ VT+N ++ C
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR AD + + ++PD TY L+SG ++ R +E + EM+ +G P Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329
Query: 474 NSYMDGLSN 482
N+ +DG N
Sbjct: 330 NTLIDGFCN 338
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P E F+ + + ++ + F+ M++ +P +N LI+G+ + + A
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ M+ P V+T+N L+ G C+N++ DLA L +EM KG P+ ++ TLI G
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Query: 271 FGERKFDEGVN 281
DE N
Sbjct: 617 AKVNIPDENKN 627
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 187/384 (48%), Gaps = 20/384 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHS-VLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
+ D T ++RSL S + + H V + C S F+ ++
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIST------------FNIYISG 59
Query: 164 FVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+A+R+ D F+ MRK G P+ YN L++G A Y+RM++
Sbjct: 60 LCRASRIGDAQTVFDGMRK--HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYS 117
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDVVT+N L+ GFC+ K D AL +F ++G P+VV++N LI GF K DE +
Sbjct: 118 PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRI 177
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ VT LV+GLC GRV +A L++D +G P Y L+ LC
Sbjct: 178 LQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCR 234
Query: 343 E-GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
E A ++++++ G P +++ LI GL R + EA L +L++G P+
Sbjct: 235 ELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVP 294
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N L++ L R +A L GL+PD +TY + + G + R ++ ++ +M
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
++G +PD+ ++N+ ++GL ++
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKR 378
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 172/333 (51%), Gaps = 5/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K ++++ L F+ K P V YN LINGF K + D+A RM
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKR-GFVPDVVTYNALINGFCKADKLDEAQRILQRM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE-RK 275
V + + PDVVT+N L++G C+N + D A L + +KG +PNV++++TLI G E R+
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRR 238
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + +M+ GC+ V+ L+ GL E V +A +L R+G P+ Y
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ L E A E+ L K G P I T I+GL + + +A +++ M ++G
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+PD V+ N ++ LC R +A+ L KG P+ ++++ L+ G R + K+
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
EML G P + TYN +DGL AR+ R
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 451
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 155/296 (52%), Gaps = 3/296 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+LI+G +K ++A + +V+ ++PD +T+ + I G C+ + + AL +
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M EKGC P+VVS N +I G E++ DE + M GC ++++ L+ G C
Sbjct: 351 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 410
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC---GEGNAGIALEVVDELWKKGNLPS 364
G+ KA + +RGV P Y LV+ LC EG A+ + D + +KG +P
Sbjct: 411 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 470
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ + LI+GL + K +A L+ M +G +P+ T+N L+ LC + + +A L +
Sbjct: 471 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFV 530
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG PD +TY ++S ++ + L + L+ G +P Y S +DGL
Sbjct: 531 AMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 16/337 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREF---DKALG 211
++ VN K R++ EA ++D P+V Y+ LI+G CRE + A
Sbjct: 193 YNSLVNGLCKNGRVD------EARMLIVDKGFSPNVITYSTLISGL--CRELRRLESARQ 244
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++MV + KPD+V++N LI G R + AL LF + +G P V ++N LI G
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + +E + +++ G E ++T + +DGLC GRV A ++ D +G +P
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ ++ LC E A ++ + KG P+ I+ TLI G R K +A ++M
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Query: 392 LKEGILPDSVTFNCLLEDLCDV---GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
LK G+ P VT+N L++ LC GR +A L KG PD +TY L+ G +
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + L+ M +G IP++ TYNS + GL K
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDK 521
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ KA R+ D LL + M + P V +N +ING K + D+A M
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEK-GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER---KFD 277
P+ ++FN LI G CR K+ A+ F+EM ++G P VV++N L+ G R +
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + + MIE G VT L+DGL G++ A L+ +G +P + Y L+
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LCG ALE+ + +KG +P I T+I L + +A L + L+ G++
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVV 573
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRL 422
P S + L++ LC V R +A +L
Sbjct: 574 PTSGMYFSLIDGLCAVARVDEALKL 598
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 14/242 (5%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174
++ L R E +L+ + A C S + I F+ + +A + +
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGC--SPNAIS--------FNTLICGQCRAGKWKKAM 418
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFYDRMVRDRVKPDVVTFNIL 231
F+ M K +P+V YN+L++G K R+ +A+ +D M+ PDVVT++ L
Sbjct: 419 TTFKEMLKR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G + K D A L M KGC PNV ++N+LI G G K DE + + M+E GC
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
++T ++ LC + V KA L GV+P YF L++ LC AL+
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597
Query: 352 VV 353
++
Sbjct: 598 LL 599
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K R+++ + M P+ +N LI G + ++ KA+ + M++
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAK-GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 221 VKPDVVTFNILISGFCRNK---KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
VKP VVT+NIL+ G C+ + + A+ LF M EKG P+VV+++ LI G K D
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + M GC + T L+ GLC +V +A EL + +G +P Y ++
Sbjct: 489 DARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
LC + AL + D + G +P+ +LI+GL + + EA L++
Sbjct: 549 SALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKAC 315
+P+ + L+R K ++ +++ G C+ S T I + GLC R+ A
Sbjct: 13 SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIS--TFNIYISGLCRASRIGDAQ 70
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ + G P Y L+ LC G A + + + K G P V+ TL+ G
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
++ K EA + + +K G +PD VT+N L+ C + +A R+ ++ L PD
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+TY+ LV+G + R E L+ +D+GF P++ TY++ + GL + + R
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESAR 243
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 156/307 (50%), Gaps = 5/307 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+L+ K R + +A+ D M + P+ VT+N+L+ G C D AL L
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R + GC P+ V++NT+++G ++ + + EM+ C + T +++ LC
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A +L+ S+ G Y ++ LC + N A+ ++ ++ G P ++
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 379
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++GL + V+A LM+ M + G LPD+VTFN L+ LC G VDA +
Sbjct: 380 YNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD-----LATYNSYMDGLSN 482
KG P+ +TY ++SG + + + L NEM +GF PD LA + D +
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEE 499
Query: 483 ARKSVRQ 489
A ++VR+
Sbjct: 500 AIQTVRK 506
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 167/332 (50%), Gaps = 10/332 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFY 213
+ + + +A R+ D R+++ G +P+ YN LI+ + + AL
Sbjct: 138 YGALTDGYCRAGRLGDA-------RRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVL 190
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ PDVVT+NIL+ C+ + + A+ L MR +GC PN V++N L+ G GE
Sbjct: 191 DDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGE 250
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+ + + + GC+ S+V ++ GLC+ R A ELV + R P + +
Sbjct: 251 GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATF 310
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ LC +G A+++++++ K G +++ +I GL R A GL+ KM
Sbjct: 311 NVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKS 370
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD VT+N LL+ LC + VDA+ L + G PD +T++ L+ ++ +
Sbjct: 371 YGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVD 430
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M D+G P+ TY++ + GL+ A K
Sbjct: 431 AIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 3/308 (0%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +R L +PS YN ++ G + A M+R+ P+ TFN++I
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR A+ L +M + GC N+V++N +I G +R D + + +M GC+
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT L+ GLC+ + + A EL+ + ++ G LP + + L+ LC +G A+EV
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ KG P+ I +T+I GL + K +A L +M +G PD + + L E L D
Sbjct: 436 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDD 494
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+A + G+ P + Y+ ++ G R + + +++ M+ G +PD TY
Sbjct: 495 DTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 554
Query: 474 NSYMDGLS 481
++GL+
Sbjct: 555 VILIEGLA 562
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 22/301 (7%)
Query: 204 REFDKALGFYDRMVRD---RVKPD--------------VVTFNILISGFCRNKKFDLALG 246
R D AL +R+VRD R +PD VV + L G+CR + A
Sbjct: 99 RPPDAALA--NRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDGYCRAGRLGDARR 156
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M + PN ++N LI + + +++ +M+ GC VT IL++ C
Sbjct: 157 VVGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATC 213
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+A EL+ G P + Y L++ +CGEG+ ALE++ L G PS +
Sbjct: 214 KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTV 273
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+++GL + +A L+ +ML+E P+ TFN ++ LC G A +L
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 333
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
S G + +TY+ +++G + L+++M G PD+ TYN+ + GL +A +
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 487 V 487
V
Sbjct: 394 V 394
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 12/294 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ TF ++ SL + +L +S + C + I + ++ +N +
Sbjct: 306 NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN---IVT-------YNAIINGLCE- 354
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R DG + + K +P + YN L+ G ++ A D M ++ PD VT
Sbjct: 355 QRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVT 414
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FN LI C+ A+ +F++M +KGC PN ++++T+I G K D+ + + EM
Sbjct: 415 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 474
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + ++L + L ++ + +A + V G+ P Y ++ LC G
Sbjct: 475 HKGFNPDKIY-QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTE 533
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A++++ + G +P + LIEGL EA L+ K+ +L +S+
Sbjct: 534 FAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSL 587
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 215/471 (45%), Gaps = 24/471 (5%)
Query: 22 PAPSIPLPSRPETPPVTLPSVTLTPTAHH-THLLRFLKTHLLTPTNNQITPSSLLHFLKS 80
P SI L P PV+ ++ T H R + H + + +TPS + L +
Sbjct: 16 PFSSISLQKTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLN 75
Query: 81 KLHHHPQ-----FTHY-----DFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS 130
LH PQ H+ D A I + L +++ + +
Sbjct: 76 -LHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIRE 134
Query: 131 VLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV 190
+ F++A S D + + +F + + + NR ++ F M++ P++
Sbjct: 135 IFEFLAA-----SRDRLGFKSSI--VFDYLIKSCCDMNRADEAFECFYTMKEK-GVLPTI 186
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
N L++ F+K + A Y M R R+K V TFNI+I+ C+ K A
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M G PN+V++NT++ G+ + + + M E S T L+ G+C +GR
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A ++ + ++G+ P Y L++ C +GN +A DE+ KKG P++ +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLAST 428
LI L ++ EA +++++ ++GI PD++T+N L+ C A L +LAS
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLAS- 425
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G+ P TY L+ +++NR KE ++L ++ EG +PD+ +N+ +DG
Sbjct: 426 -GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG 475
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 152/329 (46%), Gaps = 35/329 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN +++G+ + A M R +++PD T+ LISG C+ + + A
Sbjct: 253 KPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASK 312
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EM +KG P+ V +NTLI GF + D EM++ G + T L+ L
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R +A ++ + +G+ P Y L+ C NA A + DE+ G P+
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD--------------------------- 399
T+L+ L + + EA L +K+ EG+LPD
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492
Query: 400 --------SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
VTFN +++ C G+ +A L +G+ PD ++++ L+SGY+R
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K+ + NEMLD GF P + TYN+ + GL
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGL 581
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 158/322 (49%), Gaps = 3/322 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K R+ + FE M + G RPS IYN LI+GF D A + D M++
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQ--KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P + T+N LI ++ D A + +E++EKG +P+ +++N LI G+ +
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM+ G + + T L+ L + R+ +A +L + GVLP + L++
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG 475
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C N A E++ ++ + P + T+++G R K EA L ++M + GI PD
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
++FN L+ G DA R+R G +P +TY+ LV G + E L+
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 460 EMLDEGFIPDLATYNSYMDGLS 481
EM+ +G PD TY + ++G++
Sbjct: 596 EMVSKGMTPDDTTYFTLIEGIA 617
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N+ + A M E M K I + P YN+LING+ +C KA +D M+
Sbjct: 365 NSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLA 424
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KP T+ L+ + + A LF+++ +G P+V+ FN LI G
Sbjct: 425 SGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKG 484
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +M + VT ++ G C EG+V +A EL + RRG+ P + L+
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLIS 544
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ A V +E+ G P+V+ L++GL + ++G A L+++M+ +G+ P
Sbjct: 545 GYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604
Query: 399 DSVTFNCLLEDLCDV 413
D T+ L+E + V
Sbjct: 605 DDTTYFTLIEGIAKV 619
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 218 RDRVK-PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
RDR+ + F+ LI C + D A F M+EKG P + + N+L+ F +
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM L + S T I+++ LC EG++ KA KDF
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA--------------KDF----- 243
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V + G P+++ T++ G + A ++ M ++ I
Sbjct: 244 ----------------VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PDS T+ L+ +C GR +A ++ KGL P + Y+ L+ G+ +
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+EML +G P ++TYNS + L
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHAL 371
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%)
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
SS+ + L+ C+ R +A E +GVLP L+ A +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+++ SV +I L + K +A + M G+ P+ VT+N ++ C
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR AD + + ++PD TY L+SG ++ R +E + EM+ +G P Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329
Query: 474 NSYMDGLSN 482
N+ +DG N
Sbjct: 330 NTLIDGFCN 338
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P E F+ + + ++ + F+ M++ +P +N LI+G+ + + A
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ M+ P V+T+N L+ G C+N++ DLA L +EM KG P+ ++ TLI G
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Query: 271 FGERKFDEGVN 281
DE N
Sbjct: 617 AKVNIPDENKN 627
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 190/422 (45%), Gaps = 56/422 (13%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++ L +R SE + F+S C D I + + +
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRL--FMSMQKLGCRPDAI--------AYGTLMKGLCQT 274
Query: 168 NRMNDGLLAFEAM-----RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+N L + M R I +P++ Y+++I+G K R D+A + M +
Sbjct: 275 GNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIM 334
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV+++ LI GFC + K++ A LF EM + G P+V + + LI + K E +
Sbjct: 335 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 394
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+I+ GC VTC LV GLC + R+ KA +L + + G +P L++ LC
Sbjct: 395 LEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454
Query: 343 EGNAGIALE-------------------------VVD------------ELWKK----GN 361
GN IALE ++D EL+K+ G
Sbjct: 455 SGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+P VI+ T+LI G R K +A L +M+ G+ PD TF+ L++ LC G+ ++A+
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 574
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L + +G P+ +TY LV G +R E L +M G +PD+ TY + M GL
Sbjct: 575 LLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLC 634
Query: 482 NA 483
Sbjct: 635 QT 636
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 184/344 (53%), Gaps = 13/344 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +R+++ F +M+KL RP Y L+ G + + AL + M
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKL-GCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287
Query: 217 VRD------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ D + KP +++++I+I G C++++ D A LF+EM+ +G P+V+S+ TLI GF
Sbjct: 288 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGF 347
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K+++ + EM+++G + T +L+D LC +G+V++A +L+ +RG +P
Sbjct: 348 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDV 407
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
LV+ LC + A ++ ++ K G +P+V+ C TL++GL + A L +
Sbjct: 408 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 467
Query: 391 MLKE----GI--LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
ML + GI P++++++ +++ LC GR +A L G+ PD ++Y L+ G
Sbjct: 468 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHG 527
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ R + K+ + L NEM+D G PD+ T++ +D L K +
Sbjct: 528 FCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 571
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 177/347 (51%), Gaps = 13/347 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +R+++ F +M+KL RP Y L+ G + + + AL + M
Sbjct: 48 YSTLIKGLCMKHRISEATQLFMSMKKL-GCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 106
Query: 217 VRD------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ D + KP +V+++I+I G C++++ D A LF+EM+ +G P+V+S+ +LI GF
Sbjct: 107 LNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K+++ + EM+++G T +L+D LC EG+V++A EL+ +RG +
Sbjct: 167 CRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ LC + A + + K G P IA TL++GL + A L ++
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286
Query: 391 MLKE----GI--LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
ML + GI P ++++ +++ LC R +A L +G+ PD ++Y L+ G
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ + ++ + L NEMLD G PD+ T + +D L K + +
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 183/395 (46%), Gaps = 21/395 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++ L +R SE + F+S C D I + + +
Sbjct: 44 DIVTYSTLIKGLCMKHRISEATQL--FMSMKKLGCRPDAI--------AYGTLMKGLCQT 93
Query: 168 NRMNDGLLAFEAM-----RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
++N L + M + I +P++ Y+++I+G K R D+A + M +
Sbjct: 94 GKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMM 153
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV+++ LI GFCR+ K++ A LF EM + G +V + + LI E K E +
Sbjct: 154 PDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANEL 213
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
MI+ GC VT L+ GLC + R+ +A L + + G P Y L++ LC
Sbjct: 214 LEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQ 273
Query: 343 EGNAGIALEVVDELWKKGNL------PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
GN AL++ E+ P++I+ + +I+GL + R+ EA L ++M +GI
Sbjct: 274 TGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGI 333
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD +++ L+ C G+ A L G+ PD T +L+ ++ + E
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ ++ G IPD+ T + + GL + + T+
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQ 428
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 185/384 (48%), Gaps = 23/384 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TT ++ L + E + +L + C + +C + V
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI---PDVVTCTTL-------VKGLCMK 420
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD------RV 221
+R++ F M+KL P+V L+ G + AL + M+ D
Sbjct: 421 HRISKATQLFLKMQKL-GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
KP+ ++++I+I G C+ + D A LF+EM+ G P+V+S+ +LI GF K+ +
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ EM+++G + T +L+D LC EG+V++A EL+ +RG +P Y LV+ LC
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE------G 395
A ++ ++ K G LP V+ TL++GL + A L +KML +
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD ++++ +++ LC GR +A L G+ P+ ++Y L+ G+ R + ++ +
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L NEM+D+G + TY+ + G
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHG 743
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 6/273 (2%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I+ +P+ Y+++I+G KC D+A + M V PDV+++ LI GFCR+ K+
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 536
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A LF EM + G P+V +F+ LI E K E + MI+ GC ++VT LV
Sbjct: 537 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 596
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL- 362
GLC R+ +A +L + + G LP Y L++ LC GN ALE+ ++
Sbjct: 597 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 656
Query: 363 -----PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P VI+ + +I+GL + + EA L ++M G++P+ +++ L+ C G+
Sbjct: 657 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 716
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
DA L +G+ + +TY +++ G+ +E +
Sbjct: 717 DAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 749
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 12/311 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V+ VLI+ F K + +A + MV+ D+VT++ LI G C + A
Sbjct: 7 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE------LGCEFSSVTCEI 300
LF M++ GC P+ +++ TL++G K + +++ EM+ + C+ + V+ I
Sbjct: 67 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++DGLC + R +A EL + +G++P Y L+ C G A + +E+ G
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
V + LI+ L + K +EA+ L+E M++ G + D VT++ L++ LC R +A
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE------GFIPDLATYN 474
RL + G PD + Y L+ G + L EML++ P L +Y+
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYS 306
Query: 475 SYMDGLSNARK 485
+DGL R+
Sbjct: 307 IIIDGLCKDRR 317
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 135/274 (49%), Gaps = 6/274 (2%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++PDV T +LI FC+ K A L M ++GC ++V+++TLI+G + +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC----ELVIDFSRRGV--LPK 329
E + M +LGC ++ L+ GLC G++ A E++ D S+ G+ P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y +++ LC + A E+ E+ +G +P VI+ T+LI G R K +A L
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ML GI D T + L++ LC G+ ++A+ L + +G D +TY L+ G ++
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R E L M G PD Y + M GL
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQT 274
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ K R ++ F+ M+ L P V Y LI+GF + ++ A ++ M
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKAL-GVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+PDV TF++LI C+ K A L M ++GC PN V++ TL++G +
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL----VIDFSRRGV--LPKD 330
E + +M +LGC VT L+ GLC G + A EL + D + G P
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +++ LC G A E+ E+ G +P+VI+ T+LI G R K +A L +
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGR 415
M+ +G+ ++VT++ ++ C G+
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQ 749
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TTF ++ L + E + +L + C P + V
Sbjct: 552 DVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI---------PN-TVTYTTLVKGLCMN 601
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD------RV 221
+R+++ F M+KL P V Y L+ G + AL + +M+ D
Sbjct: 602 DRISEATQLFMKMQKL-GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 660
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
KPDV++++I+I G C++ + D A LF+EM+ G PNV+S+ +LI GF K ++ +
Sbjct: 661 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 720
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+ EM++ G + ++VT +++ G C EG++ KA
Sbjct: 721 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y+++I+G K D+A + M V P+V+++ LI GFCR+ K + A
Sbjct: 661 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKH 720
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
LF EM ++G N V+++ +I GF E + D+ +
Sbjct: 721 LFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%)
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
ML GI PD T L++ C G+ ++A+ L + +G D +TY L+ G ++R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L M G PD Y + M GL K
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGK 95
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 174/340 (51%), Gaps = 3/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
C + + +N + K R+ D L + +++ DG P YN +NG +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQ--QEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
AL D MV++ PDV T+NI+++ C+N + + A G+ +M ++GC P++ +FNTL
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + +E +++A ++ G T IL++ LC G A L + G
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L++ LC G G AL+++ ++ G S I T+I+GL + + EA
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M +GI +++TFN L++ LC + DA L ++GL P+ +TY+ +++ Y
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ K+ +++ M GF D+ TY + ++GL A ++
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRT 582
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 1/331 (0%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H ++++ +D + L ++ L + +YN L+N V+ + Y
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +KPDVVTFN L+ CR + A+ + EM +G P+ +F TL++GF E
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 230
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + M+E+GC + VT +L++G C GRV A + G P Y
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
V LC + G AL+V+D + ++G+ P V ++ L + + EA G++ +M+
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LPD TFN L+ LC R +A L + KG+ PD T++IL++ +
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM + G PD TYN+ +D L + K
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++ + A + +++D P ++ +N LI ++AL
Sbjct: 324 YNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ V PDV TFNILI+ C+ LAL LF EM+ GC P+ V++NTLI
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + +++ +M GC S++T ++DGLC + R+ +A E+ +G+ +
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + A E+++++ +G P+ I +++ + +A+ ++E M
Sbjct: 501 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G D VT+ L+ LC GRT A ++ KG+ P Y+ ++ R N ++
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+L EM + G PD TY GL +++
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 16/380 (4%)
Query: 107 HDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
HD F + +V L + + E +LN + C P++ F+ + A
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC---------LPDIT-TFNTLIAAL 366
Query: 165 VKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ + L LA + K + P V +N+LIN K + AL ++ M P
Sbjct: 367 CTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D VT+N LI C K AL L ++M GC + +++NT+I G + + +E +
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M G +++T L+DGLC + ++ A EL+ G+ P + Y ++ C +
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A ++++ + G V+ TLI GL + + A ++ M +G+ P +
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEML 462
N +L+ L DA L + G PD +TY I+ G R KE + + EM+
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 463 DEGFIPDLATYNSYMDGLSN 482
D+GFIP+ +++ +GL N
Sbjct: 665 DKGFIPEFSSFRMLAEGLLN 684
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A +A+++ +L E M P + + L+ GFV+ + AL RM
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ VT N+LI+G+C+ + + ALG ++ G P+ +++NT + G
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M++ G + T I+V+ LC G++ +A ++ RG LP + L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC AL++ ++ KG P V LI L ++ A L E+M G
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N L+++LC +G+ A D L+ + ST G +TY+ ++ G ++ R +E E
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST-GCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M +G + T+N+ +DGL +K
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 174/340 (51%), Gaps = 3/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
C + + +N + K R+ D L + +++ DG P YN +NG +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQ--QEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
AL D MV++ PDV T+NI+++ C+N + + A G+ +M ++GC P++ +FNTL
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + +E +++A ++ G T IL++ LC G A L + G
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L++ LC G G AL+++ ++ G S I T+I+GL + + EA
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M +GI +++TFN L++ LC + DA L ++GL P+ +TY+ +++ Y
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 542
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ K+ +++ M GF D+ TY + ++GL A ++
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRT 582
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 1/331 (0%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H ++++ +D + L ++ L + +YN L+N V+ + Y
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +KPDVVTFN L+ CR + A+ + EM +G P+ +F TL++GF E
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEG 230
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + M+E+GC + VT +L++G C GRV A + G P Y
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
V LC + G AL+V+D + ++G+ P V ++ L + + EA G++ +M+
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LPD TFN L+ LC R +A L + KG+ PD T++IL++ +
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM + G PD TYN+ +D L + K
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++ + A + +++D P ++ +N LI ++AL
Sbjct: 324 YNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ V PDV TFNILI+ C+ LAL LF EM+ GC P+ V++NTLI
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + +++ +M GC S++T ++DGLC + R+ +A E+ +G+ +
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + A E+++++ +G P+ I +++ + +A+ ++E M
Sbjct: 501 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G D VT+ L+ LC GRT A ++ KG+ P Y+ ++ R N ++
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+L EM + G PD TY GL +++
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 16/380 (4%)
Query: 107 HDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
HD F + +V L + + E +LN + C P++ F+ + A
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC---------LPDIT-TFNTLIAAL 366
Query: 165 VKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ + L LA + K + P V +N+LIN K + AL ++ M P
Sbjct: 367 CTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D VT+N LI C K AL L ++M GC + +++NT+I G + + +E +
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M G +++T L+DGLC + ++ A EL+ G+ P + Y ++ C +
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A ++++ + G V+ TLI GL + + A ++ M +G+ P +
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEML 462
N +L+ L DA L + G PD +TY I+ G R KE + + EM+
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 463 DEGFIPDLATYNSYMDGLSN 482
D+GFIP+ +++ +GL N
Sbjct: 665 DKGFIPEFSSFRMLAEGLLN 684
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A +A+++ ++ E M P + + L+ GFV+ + AL RM
Sbjct: 184 FNTLMKALCRAHQVRTAVIMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ VT N+LI+G+C+ + + ALG ++ G P+ +++NT + G
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M++ G + T I+V+ LC G++ +A ++ RG LP + L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC AL++ ++ KG P V LI L ++ A L E+M G
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N L+++LC +G+ A D L+ + ST G +TY+ ++ G ++ R +E E
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST-GCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M +G + T+N+ +DGL +K
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 159/292 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K ++FD + +RM R+ D+ ++NILI+ FCR + LAL +
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G + +VT L+ GL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL ++ ++ K V+
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L KM +GI PD T+N L+ LC+ GR DA RL
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++P+ +T+ L+ + +E + E E L +EM+ PD+ TY+S ++G
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 162/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K ++D F M K I RP V YN LI+ + A
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGI--RPDVFTYNSLISCLCNYGRWSDASRLLS 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A ++ ++ G P +I + L++GL + K +A + E + K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ + Y ++SG+ R+ ++E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +PD YN+
Sbjct: 555 DALFREMKEDGTLPDSGCYNT 575
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 157/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + +++ L M KL P + + L+NG+ + A+ D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD VTFN LI G + K A+ L +M ++GC P++V++ ++ G
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++DGLC + A L +G+ P F Y L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ + ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L+ G+ + R +EG
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM G + + TYN+ + GL A
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQA 443
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 146/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C PNVV++NTLI+GF ++ +EG+ + EM + G ++VT L+ GL
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A ++ GV P Y L++ LC G AL V + L K P +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + + ++ C G +AD L
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD Y+ L+ R+ + L+ EM GF+ D +T + ++ L + R
Sbjct: 563 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ DVV +N +I G C+ K D A
Sbjct: 217 QPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFA 276
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M KG P+V ++N+LI ++ + + MIE + VT L+D
Sbjct: 277 LFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFV 336
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P F Y L+ C A + + + K P+V+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ E L +M + G++ ++VT+N L++ L G A ++
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD +TY IL+ G + + ++ + + PD+ TYN ++G+ A K
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + + R++D + + M ++ +P +N LI+G + +A+ D+MV+
Sbjct: 157 LNGYCHSKRISDAVALVDQMVEM-GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +++G C+ DLAL L ++M + +VV +NT+I G + D+
Sbjct: 216 CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M G T L+ LCN GR A L+ + R + P + L++
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY+ L+ G + + + +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G PD+ TY+ +DGL
Sbjct: 456 MVSDGVPPDIITYSILLDGL 475
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F ++ L +P+V IY +I+GF + ++A + M
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D PD +N LI R+ + L +EMR G
Sbjct: 562 KEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 149/287 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V Y +LI+ F K ++A D M + + V +N LIS C+++K AL
Sbjct: 421 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 480
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M KGC P++ +FN+LI G KF+E + + +M+ G +++T L+
Sbjct: 481 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 540
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +LV D RG D Y GL++ LC GN L + +++ KG P+ I
Sbjct: 541 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 600
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+C LI GL R A + M+ G+ PD VT+N L+ LC GR +A L
Sbjct: 601 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 660
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+G+ PD +TY+ L+S + +E + L++ +D GFIP+ T+
Sbjct: 661 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 707
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 132/260 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+ K + AL + M KPD+ TFN LI G C+ KF+ ALGL+++M
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G N +++NTLI F E + + +M+ GC +T L+ LC G +
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
K L D +G+ P + L+ LC GN ALE + ++ +G P ++ +LI
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 641
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL + + EA L +K+ EGI PD++T+N L+ C G DA L G
Sbjct: 642 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 701
Query: 433 PDGMTYHILVSGYTRENRRK 452
P+ +T++ILVS + +E ++
Sbjct: 702 PNEVTWYILVSNFIKEGDQE 721
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V ++N LING+V D+A ++ M+ PD+ T+N LI G C+ A
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM+ KGC PNV+++ LI F E + +E N+ EM G ++V L+ LC
Sbjct: 411 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 470
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +V A + D S +G P F + L+ LC AL + ++ +G + + I
Sbjct: 471 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI R EA L+ ML G D +T+N L++ LC G L
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 590
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+KGL+P+ ++ +IL++G R + + +M+ G PD+ TYNS ++GL ++
Sbjct: 591 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 650
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 6/329 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++A K R+N+ +L L+ P V+ +N I+G K +A DR
Sbjct: 254 VYQTLIHALXKVGRVNE-VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 312
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+ T+ +L+ G CR K D A R + K NPNVV FNTLI G+ +
Sbjct: 313 MLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGR 368
Query: 276 FDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + +E M+ +GC T L+ GLC +G ++ A EL+ + +G P Y
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+++ C EG A V+DE+ KG + + LI L + K +A + M +
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 488
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD TFN L+ LC V + +A L +G+ + +TY+ L+ + R +E
Sbjct: 489 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
LVN+ML G D TYN + L A
Sbjct: 549 LKLVNDMLFRGCPLDDITYNGLIKALCRA 577
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 180/457 (39%), Gaps = 61/457 (13%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
+ITP L KL P +F WA T + H + ++ L ++ F
Sbjct: 75 RITPYQL-----CKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKT 129
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
+ ++L +GI E +F + + +A MR +
Sbjct: 130 IDALL-------MQMKQEGIVF---RESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCE 179
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YNV+++ + + M+ + P V TF +++ C + D A L
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M GC PN + + TLI + +E + + EM+ +GC T + GLC
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE---LWKKGNLPS 364
R+ +A +LV RG P F Y L+ LC G VDE L K P+
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK-------VDEARMLLNKVPNPN 352
Query: 365 VIACTTLIEGLRRLRKGVEASGLM-EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ TLI G + EA +M E ML G PD T+N L+ LC G V A L
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI---------------- 467
KG +P+ +TY IL+ + +E R +E N+++EM +G
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472
Query: 468 -------------------PDLATYNSYMDGLSNARK 485
PD+ T+NS + GL K
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 6/295 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY +LI GF + +AL D M+ DVVT+N +++G C+ K A L
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P+ +F TLI G+ + ++ V + MI+ + VT L+DG C
Sbjct: 487 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ K EL D R + P Y L+ C G A + DE+ +KG ++I
Sbjct: 547 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C T+++G R V+A + ML +GI+PD +T+N L+ + + DR L +
Sbjct: 607 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI---KEENMDRAFALVN 663
Query: 428 ---TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD +TY+++++G++R+ R +E E ++ +M++ G PD +TY S ++G
Sbjct: 664 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA+E ++++ V++Y N++IN K ++ + F M V PDVVT+N LI
Sbjct: 237 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+ +CR + A L M KG P V ++N +I G K+ + EM+++G
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 356
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T IL+ C ++ A + + +GV+P + L+ L G AL+
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ G P + T LI G R EA + ++ML++G + D VT+N +L LC
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+AD L + +G+ PD T+ L++GY+++ + L M+ PD+ T
Sbjct: 477 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536
Query: 473 YNSYMDG 479
YN+ +DG
Sbjct: 537 YNTLIDG 543
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LING+ K +KA+ ++ M++ +KPDVVT+N LI GFC+ + + L
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M + PN +S+ LI G+ E + EM+E G E + +TC +V G C
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +KA E + + +G++P Y L+ E N A +V+++ G LP VI
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ G R + EA +M KM++ G+ PD
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS-------------------------- 710
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++G+ +N KE + +EML GF+PD
Sbjct: 711 ---------TYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 159/334 (47%), Gaps = 5/334 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +NA+ + + + AFE M + +P V YN +ING K ++ +A G D
Sbjct: 292 YNTLINAYCRQGLLEE---AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 348
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ + PD T+NIL+ CRN A +F EM +G P++VSF+ LI
Sbjct: 349 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 408
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G +V IL+ G C G + +A ++ + +G + Y
Sbjct: 409 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC E A E+ E+ ++G P TTLI G + +A L E M++
Sbjct: 469 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 528
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD VT+N L++ C + L ++ + P+ ++Y IL++GY E
Sbjct: 529 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 588
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L +EM+++GF + T N+ + G A +V+
Sbjct: 589 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 622
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 52/346 (15%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVR-------DRVKPDVVT----------FN 229
+ S+ ++ +I+ V+ R A RMVR + V+ V+T F+
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 188
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+L+ + + +K FR ++ KG ++ + N+L+ G D + E++
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRS 248
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + + T I+++ LC ++ + D +GV P Y L+ C +G A
Sbjct: 249 GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEA 308
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
E++D + KG P V +I GL + K + A G++++MLK G+ PD+ T+N LL +
Sbjct: 309 FELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVE 368
Query: 410 LCDVGRTVDADR--------------------LRLLA---------------STKGLDPD 434
C +DA+R + LL+ GL PD
Sbjct: 369 CCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD 428
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ Y IL+ G+ R E + +EML++G + D+ TYN+ ++GL
Sbjct: 429 NVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 145 DGIFSCPEMERI---FHFAVNAFVKANRMNDGLL------------AFEAMRKLIDGRPS 189
DG EME++ ++ ++ + N ++ G+L AF ++++
Sbjct: 542 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 601
Query: 190 VSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+I N ++ G+ + KA F M+ + PD +T+N LI+GF + + D A L
Sbjct: 602 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 661
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G P+V+++N ++ GF + + E + +MIE G T L++G
Sbjct: 662 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 721
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
+ + +A + + +RG +P D
Sbjct: 722 QNNLKEAFRVHDEMLQRGFVPDD 744
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%)
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
L KG S+ AC +L+ GL ++ A + +++++ G+ + T N ++ LC +
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ KG+ PD +TY+ L++ Y R+ +E L++ M +G P + TYN+
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329
Query: 476 YMDGLSNARKSVR 488
++GL K +R
Sbjct: 330 IINGLCKTGKYLR 342
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 202/450 (44%), Gaps = 29/450 (6%)
Query: 37 VTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIF 96
+T PS T++ + H+ L LL +Q S+ L +F
Sbjct: 29 LTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALR------------------LF 70
Query: 97 AWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI 156
AS +F + + I+ L S F ++ +L + ++ C
Sbjct: 71 NLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS----------T 120
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + ++ + ++ L + M +P YN ++N V + +M
Sbjct: 121 FLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM 180
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+KPDV TFN+LI CR + A+ + +M G P+ +F T+++G+ E
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYFG 335
D + + +M+E GC +S+V+ ++V G C EGRV A + + S + G P + +
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV LC G+ A+E++D + ++G P V ++I GL +L + EA ++++M+
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P++VT+N L+ LC + +A L + ++KG+ PD T++ L+ G +
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM +G PD TYN +D L + K
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 159/336 (47%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C + V+ F K R+ D L + M P +N L+NG K
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A+ D M+++ PDV T+N +ISG C+ + A+ + +M + C+PN V++NTLI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
E + +E +A + G T L+ GLC A EL + +G
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P +F Y L++ LC +G AL ++ ++ G SVI TLI+G + K EA +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M G+ +SVT+N L++ LC R DA +L +G PD TY+ L++ + R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K+ ++V M G PD+ TY + + GL A
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 171/362 (47%), Gaps = 9/362 (2%)
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
+ LNFI + DG F P+ + F+ VN KA + + + M L +G
Sbjct: 275 VEDALNFIQEMS---NQDGFF--PD-QYTFNTLVNGLCKAGHVKHAIEIMDVM--LQEGY 326
Query: 188 -PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN +I+G K E +A+ D+M+ P+ VT+N LIS C+ + + A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L R + KG P+V +FN+LI+G R + + EM GCE T +L+D LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++G++ +A ++ G Y L++ C A E+ DE+ G + +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+GL + R+ +A+ LM++M+ EG PD T+N LL C G A +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ G +PD +TY L+SG + R + L+ + +G YN + GL RK+
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 487 VR 488
Sbjct: 627 TE 628
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 149/318 (46%), Gaps = 3/318 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++I D P+ YN LI+ K + ++A + + PDV TFN LI
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C + +A+ LF EMR KGC P+ ++N LI + K DE +NM +M GC
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S +T L+DG C + +A E+ + GV Y L++ LC A +++
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D++ +G P +L+ R +A+ +++ M G PD VT+ L+ LC
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-PDLAT 472
GR A +L KG++ Y+ ++ G R+ + E NL EML++ PD +
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 473 YNSYMDGLSNARKSVRQT 490
Y GL N +R+
Sbjct: 649 YRIVFRGLCNGGGPIREA 666
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SL S + E ++L + + C S ++ ++ F KA
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS----------VITYNTLIDGFCKA 483
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N+ + F+ M R SV+ YN LI+G K R + A D+M+ + KPD T
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N L++ FCR A + + M GC P++V++ TLI G + + + +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK-LC-GEGN 345
G + ++ GL + + +A L + + P D + +V + LC G G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
A++ + EL +KG +P + L EGL L
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 219/522 (41%), Gaps = 79/522 (15%)
Query: 22 PAPSIPLPSRPETPPV-----TLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLH 76
P PS PLP T P + ++ +P H+ L HL +P H
Sbjct: 32 PHPSSPLPISSTTNPFPELVSKISTILSSPKWEHSSEL----CHL--------SPKLKPH 79
Query: 77 FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFIS 136
+ + L H T F W S F+HD + F+ ++ L F+ V +
Sbjct: 80 HVVNILQTHKN-TDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMI 138
Query: 137 ANPCPCSNDGIFSCPEMERIFHF--AVNA--------------FVKANRMNDGLLAFEAM 180
+ C N+G E++R+ F +N+ ++ + + LA +
Sbjct: 139 KS---CRNEG-----EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMY 190
Query: 181 RKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
K+++ RPS+ +N +IN K +A + R P+ T+ LI G CRN
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
DLA +F M + GC+PN V+++TLI G E + +E ++M EM++ G E + T
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRG--------------------------------- 325
I + LC+ G +A EL+ +RG
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370
Query: 326 --VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
++P Y L+ +LC EG A + + G+LPS +I+ + +
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A + +KMLK G P+ +T+N L+ C G +A RL + GL PD TY L+S
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G++R + + +L M++ G P+ TY + +DG N K
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 171/394 (43%), Gaps = 71/394 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K R+ + L + + D P+ Y LI G + D A +DRM
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRY-DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM------------------------- 251
V+D P+ VT++ LI+G C + + A+ + EM
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323
Query: 252 ----------REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+++GC PN+ +F LI G + KF+ + + ++M+ G ++VT L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++ LC EGR A + G LP Y +++ C G+ A+ + D++ K G+
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443
Query: 362 LPSVIACTTLIEG------------LRRLRKG-----------------------VEASG 386
P+VI TLI G L + KG A+
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M++ GI P+ VT+ +++ ++ + DA L G P TY++++SG++
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ N E EN +M+ +G +P++ TY S++DGL
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 158/328 (48%), Gaps = 3/328 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ + F + ++ F+ M K P+V YN LI G+ K + A+ +
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLLE 471
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KPD T+ LISGF R K + A LF M E G +PN V++ +I G+F
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ + + ++M+E G SS T +++ G + +A ++G+LP Y
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS--GLMEKML 392
++ LC G G+A ++ E+ K+ P++ ++LI GL + + +A L+ ++
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLT 651
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G P+ T+ L++ LC GR +AD+L + KGL P Y L+ G + + +
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
N+ M GF L+ Y + + L
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICAL 739
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS YN +I F + KA+ +D+M++ P+V+T+N LI G+C+ + A+ L
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M+ G P+ ++ LI GF K + ++ Y M+E G + VT ++DG N
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+V A L G LP Y ++ + A ++ K+G LP+VI
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVIT 589
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA- 426
T+ I+GL R + A + +M K P+ T++ L+ LC GR DA+ LLA
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR 649
Query: 427 -STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ G +P+ TY LV G E R E + LV M +G P Y + + G
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 3/303 (0%)
Query: 181 RKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
+ L DG P+ YN LIN F+ A + M+ P T+N +I FC
Sbjct: 367 KMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMG 426
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
A+ +F +M + G +PNV+++NTLI G+ + + + + M G + + T
Sbjct: 427 DIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYT 486
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ G G++ A L G+ P Y +++ AL + ++ +
Sbjct: 487 ELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES 546
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
GNLPS +I G + EA KM+K+G+LP+ +T+ ++ LC GRT A
Sbjct: 547 GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE--NLVNEMLDEGFIPDLATYNSYM 477
++ + P+ TY L+ G +E R ++ E NL+ + G P++ TY + +
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 478 DGL 480
GL
Sbjct: 667 KGL 669
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 3/284 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + +++D L F M + PS YNV+I+GF K +A F +MV+
Sbjct: 524 IDGYFNLAKVDDALALFWKMVE-SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD--E 278
+ P+V+T+ I G CRN + LA +F EM ++ PN+ ++++LI G E + + E
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
N+ + GCE + T LV GLC EGR +A +LV+ ++G+ P + Y L+
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C AL + + G + LI L + EA + + ML++
Sbjct: 703 GECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS 762
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
D V + LL+ L G T +L + ++ + TY +L
Sbjct: 763 DEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLA 806
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 202/442 (45%), Gaps = 25/442 (5%)
Query: 54 LRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFL 113
R L+ H+ I PSS L F +HH T + F +++T +
Sbjct: 17 FRILQQHM----EMGIFPSSFLFF-----NHHHISTSACTRKPSLPQNNGGFVSNNSTNI 67
Query: 114 FIVRSLASSYRFSELH---SVLNF------------ISANPCPCSNDGIFSCPEMERIFH 158
I +LAS YR ++ SV F S C+ +F +
Sbjct: 68 SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + N ++ + M KL P+ S +N LING + +A+ ++ MVR
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKL-GIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+P+V+++N +I+G C+ +A+ +F++M + GC P+VV++NT+I +R ++
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM++ G + T +V G C G++ +A L + R V+P LV+
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC EG A V + + +KG P++ L++G R EA + E M+++G P
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP 366
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
++N L+ C R +A L K L+PD +TY L+ G + R KE N+
Sbjct: 367 GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIF 426
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
EM G +P+L TY+ +DG
Sbjct: 427 KEMCSYGLLPNLVTYSILLDGF 448
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 166/329 (50%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N ++ + + F M + P+V YN +ING K A+ + +M
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRR-GHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ KPDVVT+N +I C+++ + A+ EM ++G PNV ++N ++ GF +
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM+ +VT ILVDGLC EG V +A + + +GV P Y L
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C + A +V + + ++G P V + LI G + R+ EA L+ +M + +
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+VT++ L++ LC GR +A + + GL P+ +TY IL+ G+ + E
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M ++ P++ + ++G+ A K
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 161/327 (49%), Gaps = 5/327 (1%)
Query: 163 AFVKANRMN----DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
FV N N D L +F M ++ + RPSV+ + + F K +++ + ++M
Sbjct: 58 GFVSNNSTNISIDDALASFYRMVRM-NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDL 116
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V +V + N+LI+ CR D A+ + +M + G +P +FN LI G E K E
Sbjct: 117 FGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKE 176
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V + EM+ G E + ++ +++GLC G A ++ + G P Y +++
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID 236
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC + A+E + E+ +G P+V ++ G L + EA+ L ++M+ ++P
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D+VT L++ LC G +A + + KG++P+ TY+ L+ GY + E + +
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G P + +YN ++G +R+
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRR 383
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 162/337 (48%), Gaps = 5/337 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +++ K +ND A E + +++D P+V YN +++GF + ++A +
Sbjct: 231 YNTIIDSLCKDRLVND---AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFK 287
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV V PD VT IL+ G C+ A +F M EKG PN+ ++N L+ G+ +R
Sbjct: 288 EMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQR 347
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + MI GC + IL++G C R+ +A L+ + + + P Y
Sbjct: 348 LMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYS 407
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G AL + E+ G LP+++ + L++G + EA L++ M ++
Sbjct: 408 TLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P+ V L+E + G+ A L G+ P TY +++ G +E E
Sbjct: 468 KLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEA 527
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+L +M D+GF+P+ +YN + G + S R
Sbjct: 528 YDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 564
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 154/322 (47%), Gaps = 1/322 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ F ++N+ F+ M D P +L++G K +A ++ M
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGR-DVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+P++ T+N L+ G+C + + A +F M +GC P V S+N LI GF R+
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRM 384
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE ++ EM +VT L+ GLC GR +A + + G+LP Y L
Sbjct: 385 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSIL 444
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G+ AL+++ + +K P+++ T LIEG+ K A L K+ +GI
Sbjct: 445 LDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGI 504
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P T+ +++ L G + +A L G P+ +Y++++ G+ +
Sbjct: 505 RPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 564
Query: 457 LVNEMLDEGFIPDLATYNSYMD 478
L++EM+ + F +L+T+ +D
Sbjct: 565 LIDEMVGKRFSANLSTFQMLLD 586
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 3/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A R+ D L F+ M L G PSV Y++L++ K + +A+ D
Sbjct: 254 FNPLIRALCVRGRIPDALAVFDDM--LHRGCSPSVVTYSILLDATCKESGYRQAMALLDE 311
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +PD+VT+N+LI+ C D AL + + GC P+ V++ +++ G +
Sbjct: 312 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSER 371
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ E + EM C VT +V LC +G V +A E+V S G + Y
Sbjct: 372 WKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSS 431
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC G A+E++ L G P IA TT+++GL + A LM +ML
Sbjct: 432 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD 491
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VTFN ++ LC G A R+ S G PD +TY+ ++ G E+ +
Sbjct: 492 CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAM 551
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L++++ G PD+ T+N+ + GL
Sbjct: 552 ELLSDLQSCGCKPDIVTFNTLLKGL 576
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 160/329 (48%), Gaps = 10/329 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP---SVSIYNVLINGFVKCREFDKALGFY 213
++ VN + +A R+ D R+LI+G P +N LI AL +
Sbjct: 222 YNTMVNGYCRAGRIEDA-------RRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVF 274
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ P VVT++IL+ C+ + A+ L EMR KGC P++V++N LI E
Sbjct: 275 DDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE +N+ + GC+ +VT ++ LC R + EL+ + + P + +
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+V LC +G A+EVVD + + G + ++ +++++GL + + +A L+ ++
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD++ + +L+ LC + A+ L PD +T++ +V+ ++
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+V +M + G PD+ TYN +DGL N
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCN 543
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 187/407 (45%), Gaps = 30/407 (7%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS------CPE------M 153
+ D T+ +++SL S R+ E+ +L +++N C ++ F+ C + +
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA-PDEVTFNTIVTSLCQQGLVDRAI 411
Query: 154 ERIFHFA----VNAFVKANRMNDGLL-------AFEAMRKL--IDGRPSVSIYNVLINGF 200
E + H + V V + + DGL A E + +L +P Y ++ G
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 471
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
++++A M+ PD VTFN +++ C+ D A+ + +M E GC+P++
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDI 531
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++N +I G E D+ + + ++ GC+ VT L+ GLC R A +L+ +
Sbjct: 532 VTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMAN 591
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
R P + + ++ LC +G A+E + + + G +P+ + +++ L + K
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK 651
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYH 439
A L+ M PD +T+N ++ +L G+ +A D LR++ S GL PD TY
Sbjct: 652 AQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVS-NGLCPDTTTYR 708
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L G RE+ ++ + D G PD YN + G R++
Sbjct: 709 SLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRT 755
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 148/308 (48%), Gaps = 4/308 (1%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E M +++ D P +N ++ + D+A+ ++M + PD+VT+N +I
Sbjct: 480 AEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID 539
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C D A+ L +++ GC P++V+FNTL++G G ++++ + M+ C
Sbjct: 540 GLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPP 599
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+T ++ LC +G + +A E + + G +P Y +V+ L G A ALE++
Sbjct: 600 DELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ P +I T+I L + K EA L+ M+ G+ PD+ T+ L +C
Sbjct: 660 SGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCRE 717
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
T A R+ GL PD Y+ ++ G+ R+ R + M+ G +PD +TY
Sbjct: 718 DGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTY 777
Query: 474 NSYMDGLS 481
++ L+
Sbjct: 778 VILLEALA 785
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 38/354 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + V+ +++ L+ F++M GR P V N+LI A + +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMAS-GGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGP 215
Query: 219 DRVKPDVVTFNILISGFCRNKKFD--------------------------------LALG 246
VVT+N +++G+CR + + AL
Sbjct: 216 SAT---VVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALA 272
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M +GC+P+VV+++ L+ E + + + + EM GCE VT +L++ +C
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
NEG V +A ++ + G P Y +++ LCG E++ E+ P +
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV 392
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T++ L + A +++ M + G + D VT++ +L+ LCDVGR DA L
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G PD + Y ++ G + + E L+ EML PD T+N+ + L
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 136/351 (38%), Gaps = 46/351 (13%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D + +++ L S+ ++ ++ + CS+ CP E F+ V +
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEML-----CSD-----CPPDEVTFNTVVASLC 507
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ ++ + E M + +G P + YN +I+G D A+ + KPD
Sbjct: 508 QKGLVDRAIRVVEQMSE--NGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+VTFN L+ G C +++ A L M C P+ ++FNT+I + + +
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELV-------------------------- 318
M E GC +S T I+VD L G+ A EL+
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKM 685
Query: 319 ---IDFSR----RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+D R G+ P Y L +C E A+ ++ + G P +
Sbjct: 686 EEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDV 745
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+ G R R+ A M+ G +PD T+ LLE L G +A RL
Sbjct: 746 LLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TF ++ SL ++ L ++ N C N +S V+A +KA
Sbjct: 600 DELTFNTVITSLCQKGLLTQAIETLKIMAENGC-VPNSSTYS---------IVVDALLKA 649
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ A E + + +G P + YN +I+ K + ++AL MV + + PD T
Sbjct: 650 GKAQ---AALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTT 706
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ L G CR D A+ + R +++ G +P+ +N ++ GF +R+ D ++ M+
Sbjct: 707 YRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMV 766
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
GC T IL++ L G + +A L+ GVL K
Sbjct: 767 SSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKL 810
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 91/248 (36%), Gaps = 43/248 (17%)
Query: 240 KFDLALGLFREMREKGCN--PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D AL LF M G P VV N LI+ + + + + LG + VT
Sbjct: 165 EIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERV---FAALGPSATVVT 221
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
+V+G C GR+ A L+ P F + L+ LC G AL V D+
Sbjct: 222 YNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDD-- 276
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
ML G P VT++ LL+ C
Sbjct: 277 ---------------------------------MLHRGCSPSVVTYSILLDATCKESGYR 303
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L KG +PD +TY++L++ E E N+++ + G PD TY +
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 478 DGLSNARK 485
L + +
Sbjct: 364 KSLCGSER 371
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 14/113 (12%)
Query: 376 RRLRKGV------EASGLMEKMLKEG--ILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
RRLR V EA L + M G P V N L++ LC GR DA+R + +
Sbjct: 155 RRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAER---VFA 211
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G +TY+ +V+GY R R ++ L+N M F PD T+N + L
Sbjct: 212 ALGPSATVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRAL 261
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 219/522 (41%), Gaps = 79/522 (15%)
Query: 22 PAPSIPLPSRPETPPV-----TLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLH 76
P PS PLP T P + ++ +P H+ L HL +P H
Sbjct: 32 PHPSSPLPISSTTNPFPELVSKISTILSSPKWEHSSEL----CHL--------SPKLKPH 79
Query: 77 FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFIS 136
+ + L H T F W S F+HD + F+ ++ L F+ V +
Sbjct: 80 HVVNILQTHKN-TDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMI 138
Query: 137 ANPCPCSNDGIFSCPEMERIFHF--AVNA--------------FVKANRMNDGLLAFEAM 180
+ C N+G E++R+ F +N+ ++ + + LA +
Sbjct: 139 KS---CRNEG-----EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMY 190
Query: 181 RKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
K+++ RPS+ +N +IN K +A + R P+ T+ LI G CRN
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
DLA +F M + GC+PN V+++TLI G E + +E ++M EM++ G E + T
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRG--------------------------------- 325
I + LC+ G +A EL+ +RG
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370
Query: 326 --VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
++P Y L+ +LC EG A + + G+LPS +I+ + +
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A + +KMLK G P+ +T+N L+ C G +A RL + GL PD TY L+S
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G++R + + +L M++ G P+ TY + +DG N K
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 158/328 (48%), Gaps = 3/328 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ + F + ++ F+ M K P+V YN LI G+ K + A+ +
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLK-AGSSPNVITYNTLIYGYCKQGNLNNAMRLLE 471
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KPD T+ LISGF R K + A LF M E G +PN V++ +I G+F
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ + + ++M+E G SS T +++ G + +A ++G+LP Y
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS--GLMEKML 392
++ LC G G+A ++ E+ K+ P++ ++LI GL + + +A L+ ++
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLT 651
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G P+ T+ L++ LC GR +AD+L + KGL P Y L+ G + + +
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
N+ M GF L+ Y + + L
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICAL 739
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 171/394 (43%), Gaps = 71/394 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K R+ + L + + D P+ Y LI G + D A +DRM
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRY-DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM------------------------- 251
V+D P+ VT++ LI+G C + + A+ + EM
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323
Query: 252 ----------REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+++GC PN+ +F LI G + KF+ + + ++M+ G ++VT L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++ LC EGR A + G LP Y +++ C G+ A+ + D++ K G+
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443
Query: 362 LPSVIACTTLIEG------------LRRLRKG-----------------------VEASG 386
P+VI TLI G L + KG A+
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M++ GI P+ VT+ +++ ++ + DA L G P TY++++SG++
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ N E EN +M+ +G +P++ TY S++DGL
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS YN +I F + KA+ +D+M++ P+V+T+N LI G+C+ + A+ L
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M+ G P+ ++ LI GF K + ++ Y M+E G + VT ++DG N
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+V A L G LP Y ++ + A ++ K+G LP+VI
Sbjct: 530 LAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVIT 589
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA- 426
T+ I+GL R + A + +M K P+ T++ L+ LC GR DA+ LLA
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR 649
Query: 427 -STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ G +P+ TY LV G E R E + LV M +G P Y + + G
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIG 703
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 3/303 (0%)
Query: 181 RKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
+ L DG P+ YN LIN F+ A + M+ P T+N +I FC
Sbjct: 367 KMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMG 426
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
A+ +F +M + G +PNV+++NTLI G+ + + + + M G + + T
Sbjct: 427 DIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYT 486
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ G G++ A L G+ P Y +++ AL + ++ +
Sbjct: 487 ELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES 546
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
GNLPS +I G + EA KM+K+G+LP+ +T+ ++ LC GRT A
Sbjct: 547 GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE--NLVNEMLDEGFIPDLATYNSYM 477
++ + P+ TY L+ G +E R ++ E NL+ + G P++ TY + +
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 478 DGL 480
GL
Sbjct: 667 KGL 669
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 3/284 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + +++D L F M + PS YNV+I+GF K +A F +MV+
Sbjct: 524 IDGYFNLAKVDDALALFWKMVE-SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG 582
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD--E 278
+ P+V+T+ I G CRN + LA +F EM ++ PN+ ++++LI G E + + E
Sbjct: 583 LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
N+ + GCE + T LV GLC EGR +A +LV+ ++G+ P + Y L+
Sbjct: 643 MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLI 702
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C AL + + G + LI L + EA + + ML++
Sbjct: 703 GECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNS 762
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
D V + LL+ L G T +L + ++ + TY +L
Sbjct: 763 DEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLA 806
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 17/323 (5%)
Query: 168 NRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRM--------V 217
NRMN E M K++ D +P+V + +LIN K R D AL ++M +
Sbjct: 322 NRMN------ELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGI 375
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR-EKGCNPNVVSFNTLIRGFFGERKF 276
V+PDVV +N LI G C+ + LGL MR +KGC P+ +++N LI GF +
Sbjct: 376 SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEI 435
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++G + EM + G + VT LV G+C GRV A ++ RRG+ Y L
Sbjct: 436 EKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTAL 495
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C N A+E+ +E+ K G P I TLI G + + +AS ++ ++ K GI
Sbjct: 496 INAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGI 555
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+V +N L+ C + + GL PD +TY+ L++ ++ K +
Sbjct: 556 RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQK 615
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
++ +M+ G +P +ATY + ++
Sbjct: 616 VMRKMIKAGVVPTVATYGAVINA 638
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ ++ K R +GL E MR P YN LI+GF K E +K +D
Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDE 444
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++ V P+VVT N L+ G CR + A+ F E + +G + V++ LI F
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F++ + + EM++ GC ++ L+ G GR+ A ++ + + G+ P Y
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C E++ E+ + G P I TLI + A +M KM+K G
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
++P T+ ++ C G +A + + + + + P+ + Y+IL++ + N+ K
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+L+ +M G P+ TYN+ GL + +
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 9/299 (3%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI + R+ ++ + M++ + N L++G R F+ L +M E
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEM--------IELGCEFSSVTCEILVDGLCN 307
PNVV+F LI R+ D+ + + +M I + E V L+DGLC
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395
Query: 308 EGRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR + L+ S++G P Y L++ C G E+ DE+ K+G P+V+
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TL+ G+ R + A + + G+ D+VT+ L+ C+V A L
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G PD + Y+ L+SG+++ R + ++ E+ G PD YN+ + G K
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNK 574
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+NAF N + F M K P +Y LI+GF + A + +
Sbjct: 496 INAFCNVNNFEKAMELFNEMLK-SGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR--GFFGERKFDE 278
++PD V +N LI GFCR KF + +EM E G P+ +++NTLI G+ KF +
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLV 337
V +MI+ G + T +++ C G +A E+ D + V P Y L+
Sbjct: 615 KV--MRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILI 672
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC A+ +++++ G P+ + +GLR + + M++M++
Sbjct: 673 NSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACN 732
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLR 423
PD +T L E L VG + +RL+
Sbjct: 733 PDYITMEILTEWLSAVG---EIERLK 755
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 27/275 (9%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKG----CNPNVVSFNTLIRGFFGERKF-------D 277
N+ +S R+ + AL + EM E C PN + + L F +R+ D
Sbjct: 194 NVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILF-SFLLKRERNEELLSED 252
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E VN+ + E G SS L+ LC + + +L + + G + + L+
Sbjct: 253 EIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLL 312
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM------ 391
L EGN E+++++ + P+V+ LI + + R+ +A ++EKM
Sbjct: 313 TGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKES 372
Query: 392 --LKEGILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPDGMTYHILVSGY 445
+ + PD V +N L++ LC VGR + +R+R S KG PD +TY+ L+ G+
Sbjct: 373 GGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMR---SQKGCAPDTITYNCLIDGF 429
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++G+ L +EM EG P++ T N+ + G+
Sbjct: 430 CKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
LV+ F GVL F L+ +LC ++ E+ K G + AC +L+ GL
Sbjct: 257 LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLA 316
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG------ 430
R + LMEKM++ I P+ VTF L+ +C R DA L +L G
Sbjct: 317 REGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDA--LEVLEKMSGGKESGG 374
Query: 431 ----LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE-GFIPDLATYNSYMDGLSNA 483
++PD + Y+ L+ G + R++EG L+ M + G PD TYN +DG A
Sbjct: 375 ISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKA 432
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 5/143 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +NA+ N+ + F+ M+ P+ IYN+LIN K + A+ + M
Sbjct: 632 YGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM 691
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V P+ T+N + G K + M E CNP+ ++ L +
Sbjct: 692 KIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEI 751
Query: 277 DEGVNMAYEMIELGCEFSSVTCE 299
+ + GCE SS T +
Sbjct: 752 ER-----LKKFVAGCEVSSSTAQ 769
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 174/340 (51%), Gaps = 3/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
C + + +N + K R+ D L + +++ DG P YN +NG +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQ--QEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
AL D MV++ PDV T+NI+++ C+N + + A G+ +M ++GC P++ +FNTL
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + +E +++A ++ G T IL++ LC G A L + G
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L++ LC G G AL+++ ++ G S I T+I+GL + + EA
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M +GI +++TFN L++ LC + DA L ++GL P+ +TY+ +++ Y
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYC 542
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ K+ +++ M GF D+ TY + ++GL A ++
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRT 582
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 1/331 (0%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H ++++ +D + L ++ L + +YN L+N V+ + Y
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +KPDVVTFN L+ CR + A+ + EM +G P+ +F TL++GF E
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 230
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + M+E+GC + VT +L++G C GRV A + G P Y
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
V LC + G AL+V+D + ++G+ P V ++ L + + EA G++ +M+
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LPD TFN L+ LC R +A L + KG+ PD T++IL++ +
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM + G PD TYN+ +D L + K
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 441
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 5/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++ + A + +++D P ++ +N LI ++AL
Sbjct: 324 YNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ V PDV TFNILI+ C+ LAL LF EM+ GC P+ V++NTLI
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + +++ +M GC S++T ++DGLC + R+ +A E+ +G+ +
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + A +++++ +G P+ I +++ + +A+ ++E M
Sbjct: 501 TLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G D VT+ L+ LC GRT A ++ KG+ P Y+ ++ R N ++
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+L EM + G PD TY GL +++
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 656
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 174/380 (45%), Gaps = 16/380 (4%)
Query: 107 HDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
HD F + +V L + + E +LN + C P++ F+ + A
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC---------LPDIT-TFNTLIAAL 366
Query: 165 VKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ + L LA + K + P V +N+LIN K + AL ++ M P
Sbjct: 367 CTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D VT+N LI C K AL L ++M GC + +++NT+I G + + +E +
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M G +++T L+DGLC + ++ A L+ G+ P + Y ++ C +
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQ 544
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A ++++ + G V+ TLI GL + + A ++ M +G+ P +
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEML 462
N +L+ L DA L + G PD +TY I+ G R KE + + EM+
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664
Query: 463 DEGFIPDLATYNSYMDGLSN 482
D+GFIP+ +++ +GL N
Sbjct: 665 DKGFIPEFSSFRMLAEGLLN 684
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A +A+++ +L E M P + + L+ GFV+ + AL RM
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ VT N+LI+G+C+ + + ALG ++ G P+ +++NT + G
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M++ G + T I+V+ LC G++ +A ++ RG LP + L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC AL++ ++ KG P V LI L ++ A L E+M G
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N L+++LC +G+ A D L+ + ST G +TY+ ++ G ++ R +E E
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST-GCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M +G + T+N+ +DGL +K
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 162/297 (54%), Gaps = 2/297 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P++ +YN LI+G+ E + AL ++ M +R P+V T+ LI G C++ K + A+
Sbjct: 209 EPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMV 268
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF M E G PNVV++ LI+G E + + M G + T +L+D LC
Sbjct: 269 LFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+V +A + ++GV + Y L++ LC G A E++ ++ +G +P
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDADRLRLL 425
+ ++LI+GL R +K +A+ ++E M+++GI VT+ ++++L +VG +
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+T G++PD +TY + V Y E R ++ E+++ +M+D G P+L TYN+ + G +N
Sbjct: 449 IAT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 7/322 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGF 212
+++ ++ + A M L FE M DG P+V Y LI+G K + ++A+
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGM----DGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ RMV ++P+VVT+ LI G C A L M G PN +F+ LI
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K +E +++ G + + V L+DGLC G++ A EL+ G +P
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC + A +++++ +KG S + T +I+ L R + +KM+
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
GI PD VT+ + C+ GR DA+ + + +G+ P+ +TY+ L+ GY
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ + M+ +G+ P+ +Y
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYT 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++G + +A+ + M D PD + ++ G C + + A L E
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PN+V +N LI G+ + + + + M C + T L+ GLC G+V
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L G+ P Y L++ C EG+ A ++ + G +P+ + LI
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K EA + ++K+G+ + V + L++ LC G+ AD L ++G
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +Y L+ G R+ + + ++ +M+++G TY +D L
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 37/351 (10%)
Query: 177 FEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
F M L P+ ++ Y LIN + + A ++ + PD + + G
Sbjct: 57 FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR A +F M +GC ++ L+ G G E + + M C
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ +V GLC GR +A L+ + G P Y L++ C G AL+V +
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ P+V T LI GL + K A L +M++ G+ P+ VT+ L++ C+ G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE------------------- 455
A RL L T GL P+ T+ +L+ + + +E +
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 456 ----------------NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
L+ +M+ EGF+PD +Y+S +DGL +K + T
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 117/263 (44%), Gaps = 17/263 (6%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALG 211
E ++ ++ K +++ A E M+K+I P Y+ LI+G + ++ +A
Sbjct: 352 EVVYTSLIDGLCKTGKIDA---ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M+ ++ VT+ I+I R + +F +M G NP++V++ +R +
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYC 468
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + ++ +M +M++ G + VT L+ G N G V +A +G P +
Sbjct: 469 EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV-------IACTTLIEGLRRLRKGVEA 384
Y L+ + + ++ ++++ WK ++ + I LI GL + E
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDI----WKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEF 584
Query: 385 SGLMEKMLKEGILPDSVTFNCLL 407
S L+ M + G P S T N ++
Sbjct: 585 SSLLSVMKEHGYQP-SNTINAMI 606
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 4/231 (1%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P + NTL+ R F + ++A M T L++ C G + A +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ G+ P + Y V C G A V + +G L + T L+ GL
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
EA + M + PD+ + ++ LC+ GRT +A+ L A + G +P+ +
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
Y+ L+ GY + + M P++ TY + GL + K R
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 174/340 (51%), Gaps = 3/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
C + + +N + K R+ D L + +++ DG P YN +NG +
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQ--QEIADGFEPDQITYNTFVNGLCQNDHV 210
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
AL D MV++ PDV T+NI+++ C+N + + A G+ +M ++GC P++ +FNTL
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + +E +++A ++ G T IL++ LC G A L + G
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L++ LC G G AL+++ ++ G S I T+I+GL + + EA
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 390
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M +GI +++TFN L++ LC + DA L ++GL P+ +TY+ +++ Y
Sbjct: 391 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYC 450
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ K+ +++ M GF D+ TY + ++GL A ++
Sbjct: 451 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRT 490
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 1/331 (0%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H ++++ +D + L ++ L + +YN L+N V+ + Y
Sbjct: 19 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 78
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +KPDVVTFN L+ CR + A+ + EM +G P+ +F TL++GF E
Sbjct: 79 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 138
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + M+E+GC + VT +L++G C GRV A + G P Y
Sbjct: 139 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 198
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
V LC + G AL+V+D + ++G+ P V ++ L + + EA G++ +M+
Sbjct: 199 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 258
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LPD TFN L+ LC R +A L + KG+ PD T++IL++ +
Sbjct: 259 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 318
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM + G PD TYN+ +D L + K
Sbjct: 319 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK 349
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN K ++ + A + +++D P ++ +N LI ++AL
Sbjct: 232 YNIVVNCLCKNGQLEE---AKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ V PDV TFNILI+ C+ LAL LF EM+ GC P+ V++NTLI
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 348
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + +++ +M GC S++T ++DGLC + R+ +A E+ +G+ +
Sbjct: 349 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 408
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + A E+++++ +G P+ I +++ + +A+ ++E M
Sbjct: 409 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 468
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G D VT+ L+ LC GRT A ++ KG+ P Y+ ++ R N ++
Sbjct: 469 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 528
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+L EM + G PD TY GL +++
Sbjct: 529 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 564
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 16/380 (4%)
Query: 107 HDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
HD F + +V L + + E +LN + C P++ F+ + A
Sbjct: 225 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGC---------LPDI-TTFNTLIAAL 274
Query: 165 VKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ + L LA + K + P V +N+LIN K + AL ++ M P
Sbjct: 275 CTGNRLEEALDLARQVTVKGVS--PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D VT+N LI C K AL L ++M GC + +++NT+I G + + +E +
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M G +++T L+DGLC + ++ A EL+ G+ P + Y ++ C +
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A ++++ + G V+ TLI GL + + A ++ M +G+ P +
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEML 462
N +L+ L DA L + G PD +TY I+ G R KE + + EM+
Sbjct: 513 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 572
Query: 463 DEGFIPDLATYNSYMDGLSN 482
D+GFIP+ +++ +GL N
Sbjct: 573 DKGFIPEFSSFRMLAEGLLN 592
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 160/330 (48%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A +A+++ +L E M P + + L+ GFV+ + AL RM
Sbjct: 92 FNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ VT N+LI+G+C+ + + ALG ++ G P+ +++NT + G
Sbjct: 151 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M++ G + T I+V+ LC G++ +A ++ RG LP + L
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC AL++ ++ KG P V LI L ++ A L E+M G
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N L+++LC +G+ A D L+ + ST G +TY+ ++ G ++ R +E E
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST-GCPRSTITYNTIIDGLCKKMRIEEAE 389
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M +G + T+N+ +DGL +K
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKK 419
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 37/276 (13%)
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY---------------------- 284
L EMR +G + ++ + + G++ FD+ V++
Sbjct: 4 LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63
Query: 285 ---------------EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
EM G + VT L+ LC +V A ++ + S RGV P
Sbjct: 64 LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ + L++ EG+ AL V + + G + + LI G +L + +A G ++
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ + +G PD +T+N + LC A ++ + +G DPD TY+I+V+ +
Sbjct: 184 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 243
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +E + ++N+M+D G +PD+ T+N+ + L +
Sbjct: 244 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 279
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 165/355 (46%), Gaps = 39/355 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK---ALGFY 213
F+ VN K ++N E M K+ P+V YN LI+G+ K K A
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDM-KVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAIL 216
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MV + P+ VT+NILI GFC+++ A+ +F EM+ +G PNVV++N LI G +
Sbjct: 217 KEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSD 276
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K DE V + +M+ E + VT +L++G C V +A L D ++GV P Y
Sbjct: 277 GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C +G A + + + +G P V LI GL R A LM +M+
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE----- 448
+ + D VT+N L++ LC G + A +L KGL+P +TY+ L+ GY RE
Sbjct: 397 KKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRA 456
Query: 449 ------------------------------NRRKEGENLVNEMLDEGFIPDLATY 473
R ++ L+NEML+ G +P+ TY
Sbjct: 457 ALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 200/410 (48%), Gaps = 21/410 (5%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F W+ H I+ SLA + ++S++ S L+ S IF M
Sbjct: 19 FTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAIFHAISMSG 78
Query: 156 IFHFAVN---------AFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCR 204
F VN AFV+ ++ L FEA ++ D +S+ N L++G VK
Sbjct: 79 D-SFCVNSILADMLVLAFVRNLKI---LRGFEAFKRAGDYGFKLSLISCNPLLSGLVKES 134
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E Y M++ +++ +V++FNI+++G C+ K + A + +M+ G +PNV+++N
Sbjct: 135 ENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYN 194
Query: 265 TLIRGF--FGE-RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
TLI G+ G K + + EM+ G + VT IL+DG C + V A + +
Sbjct: 195 TLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM 254
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
R+G+ P Y L+ LC +G A+ + D++ P+V+ LI G + +
Sbjct: 255 QRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTV 314
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L M K+G+ P+++T+ L++ C GR DA L + +G+ P+ TY+ L
Sbjct: 315 NEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCL 374
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL---SNARKSVR 488
++G R+ K +L+NEM+ + D+ TYN +D L +RK+V+
Sbjct: 375 IAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVK 424
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 175/324 (54%), Gaps = 24/324 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
CP E ++ ++ F K ++ + F M++ G RP+V YN+LING + D+
Sbjct: 225 CPN-EVTYNILIDGFCKDENVSGAMRVFGEMQR--QGLRPNVVTYNILINGLCSDGKVDE 281
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ D+MV ++P+VVT N+LI+GFC+NK + A+ LF +M ++G +PN +++ TLI
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341
Query: 269 GFFGERKFDEGVNMAYEMIELGC--EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ + + ++ + MI+ G E S+ C L+ GLC +G V A L+ + + +
Sbjct: 342 AYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC--LIAGLCRKGDVKAARSLMNEMVSKKL 399
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
Y L++ LC +G + A++++DE+++KG PS + TL++G R A
Sbjct: 400 SADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALI 459
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ +M ++G + VT N L++ C GR DA+ L +GL P+ TY I+
Sbjct: 460 VRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII----- 514
Query: 447 RENRRKEGENLVNEMLDEGFIPDL 470
KE EM+++GF+PD+
Sbjct: 515 -----KE------EMMEKGFVPDI 527
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 162/296 (54%), Gaps = 2/296 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LI+G+ E + AL ++ M +R P+V T+ LI G C++ K + A+ L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M E G PNVV++ LI+G E + + M G + T +L+D LC
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+V +A + ++GV + Y L++ LC G A E++ ++ +G +P +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDADRLRLLA 426
++LI+GL R +K +A+ ++E M+++GI VT+ ++++L +VG +
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+T G++PD +TY + V Y E R ++ E+++ +M+D G P+L TYN+ + G +N
Sbjct: 450 AT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 7/322 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGF 212
+++ ++ + A M L FE M DG P+V Y LI+G K + ++A+
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGM----DGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ RMV ++P+VVT+ LI G C A L M G PN +F+ LI
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K +E +++ G + + V L+DGLC G++ A EL+ G +P
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC + A +++++ +KG S + T +I+ L R + +KM+
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
GI PD VT+ + C+ GR DA+ + + +G+ P+ +TY+ L+ GY
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVS 509
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ + M+ +G+ P+ +Y
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYT 531
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++G + +A+ + M D PD + ++ G C + + A L E
Sbjct: 145 YTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PN+V +N LI G+ + + + + M C + T L+ GLC G+V
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L G+ P Y L++ C EG+ A ++ + G +P+ + LI
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K EA + ++K+G+ + V + L++ LC G+ AD L ++G
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +Y L+ G R+ + + ++ +M+++G TY +D L
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 37/351 (10%)
Query: 177 FEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
F M L P+ ++ Y LIN + + A ++ + PD + + G
Sbjct: 57 FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR A +F M +GC ++ L+ G G E + + M C
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ +V GLC GR +A L+ + G P Y L++ C G AL+V +
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ P+V T LI GL + K A L +M++ G+ P+ VT+ L++ C+ G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE------------------- 455
A RL L T GL P+ T+ +L+ + + +E +
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 456 ----------------NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
L+ +M+ EGF+PD +Y+S +DGL +K + T
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 121/291 (41%), Gaps = 28/291 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALG 211
E ++ ++ K +++ A E M+K+I P Y+ LI+G + ++ +A
Sbjct: 352 EVVYTSLIDGLCKTGKIDA---ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATL 408
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M+ ++ VT+ I+I R + +F +M G NP++V++ +R +
Sbjct: 409 MLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYC 468
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + ++ +M +M++ G + VT L+ G N G V +A +G P +
Sbjct: 469 EEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED 528
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ + + ++ ++++ WK ++ + L+E +
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDI----WKIADMKDLQV-------------------LLEDI 565
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+ + + ++C + LC V R +A + L P Y ++
Sbjct: 566 TERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 4/231 (1%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P + NTL+ R F + ++A M T L++ C G + A +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ G+ P + Y V C G A V + +G L + T L+ GL
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
EA + M + PD+ + ++ LC+ GRT +A+ L A + G +P+ +
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
Y+ L+ GY + + M P++ TY + GL + K R
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 185/375 (49%), Gaps = 20/375 (5%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++++L + R H + F+ SN G CP + V++ KA ++
Sbjct: 181 TYNILLKALCKNDRVDAAHKL--FVEM-----SNKG---CPPDAVTYTTMVSSLCKAGKI 230
Query: 171 NDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+D + + GR PSV +YN LI+G K + A+ M+ + V P+VV++
Sbjct: 231 DDA--------RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ +I+ C + +LA LF +M +GC+ N+ +F LI+G F K E +++ MI+
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GCE + V L+ GLC+ G + +A ++ R G LP Y L++ G+
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E + + G P+V+ T +++ L + +A+ L+EKM EG P+++TFN ++
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIK 462
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR A +L G P+ TY+ L+ R N+ +E L E+ P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 469 DLATYNSYMDGLSNA 483
+L TYN+ + G S A
Sbjct: 523 NLVTYNTVLYGFSRA 537
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 16/385 (4%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F+ + ++F+H +T+ ++ L + +L + DGI C E
Sbjct: 61 FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKM-------DGINCC---ED 110
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F +N + + L F + + +P+V IYN L++ + +F Y
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEF-GCKPTVRIYNHLLDALLSENKFQMINPLYTN 169
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +D + P+V T+NIL+ C+N + D A LF EM KGC P+ V++ T++ K
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ +A + S L+DG+C EGR+ A +L+ + GV P Y
Sbjct: 230 IDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC GN +A + +++ +G ++ T LI+G K EA L + M+++G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ V +N L+ LC G +A ++ G P+ TY IL+ G+ +
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
N M+ G P++ TY +D L
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVL 429
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 2/293 (0%)
Query: 185 DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
DG P+V YN LI+G ++AL D+M R P+V T++ILI GF ++
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + M GC PNVV++ ++ FD+ ++ +M GC +++T +
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIK 462
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC GRV A +L+ G LP Y L++ L A + E+ + P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT-VDADRL 422
+++ T++ G R EA L K L G PDS+T+N ++ C G+ + A +
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
++S K PD +TY L+ G +E +++ +++G P+ AT+N+
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 18/281 (6%)
Query: 142 CSN----DGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEAMRKLID--GR 187
CSN + + C +M+R + ++ F K+ D + A E ++I R
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG---DLVGASETWNRMISHGCR 416
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y +++ K FD+A ++M + P+ +TFN I G C N + + A+ L
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKL 476
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M+ GC PN+ ++N L+ F K++E + E+ + + VT ++ G
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSR 536
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK-KGNLPSVI 366
G + +A +L RG P Y ++ C +G IA ++V+ + K P +I
Sbjct: 537 AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDII 596
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
T+LI G EA ++K + +GI P+ T+N L+
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 350 LEVVDELWKKGNLPSVIACTTL----IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+++V + ++ + + C L I G +R+ +A + ++ + G P +N
Sbjct: 90 MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LL+ L + + L GL P+ TY+IL+ + +R L EM ++G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 466 FIPDLATYNSYMDGLSNARK 485
PD TY + + L A K
Sbjct: 210 CPPDAVTYTTMVSSLCKAGK 229
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 152/294 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ +N L++G + A+ +D MV+ +PDV+T++ +I+G C+ +AL
Sbjct: 7 QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L ++M EKGC PNVV++NT+I +R E ++ EM++ G T ++ G C
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
N GRV +A L R V+P + L++ LC + A V + + +KG P V
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++G + EA L M ++G P+ ++N L+ C GR +A L
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
S K L PD TY L+ G+ + R +E + L+ EM G +P+L TY+ +DGL
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 144/292 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ +++GF ++A + +MV V P+ VTF ILI G C+ + A +
Sbjct: 113 PDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLV 172
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M EKG P+V ++N L+ G+ + DE + M GC + + IL++G C
Sbjct: 173 FETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCK 232
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A L+ + S + + P F Y L+ C G A E++ E+ G LP++I
Sbjct: 233 SGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLIT 292
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ +++GL + EA L++ M + I P+ + L+E +C G+ A L
Sbjct: 293 YSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLF 352
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P +TY +++SG + E L EM G +P+ TYN + G
Sbjct: 353 VKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQG 404
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 18/341 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ F R+N+ F+ M R +I P+ + +LI+G K R +A ++ M
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVI---PNKVTFTILIDGLCKKRMISEAWLVFETMTE 178
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++PDV T+N L+ G+C + D A LF M KGC PNV S+N LI G + DE
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM T L+ G C GR +A EL+ + G+LP Y +++
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G+ A E++ + + P++ T LIEG+ K A L + +GI P
Sbjct: 299 GLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
VT+ ++ L G + +A L + G P+ TY++++ G+ R L+
Sbjct: 359 TVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLI 418
Query: 459 NEMLDEGFIPDLATY-------------NSYMDGLSNARKS 486
EM+ +GF D +T+ + +M G S RK+
Sbjct: 419 EEMVGKGFSADSSTFRMLSDLESSDEIISQFMRGSSQDRKT 459
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 155/314 (49%), Gaps = 2/314 (0%)
Query: 169 RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+M + +A + ++K+ + +P+V YN +I+ K R +A+ F+ MV++ + PDV
Sbjct: 57 KMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVF 116
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ ++ GFC + + A LF++M E+ PN V+F LI G +R E + M
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETM 176
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
E G E T LVDG C+ ++ +A +L R+G P Y L+ C G
Sbjct: 177 TEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRI 236
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ E+ K P + +TL+ G ++ + EA L+++M G+LP+ +T++ +
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L+ LC G +A L ++P+ Y IL+ G + + L + + +G
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356
Query: 467 IPDLATYNSYMDGL 480
P + TY + GL
Sbjct: 357 QPTVVTYTVMISGL 370
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ ++ D + F+ M K+ P V Y+ +ING K AL +M
Sbjct: 13 FNTLLSGLCSKAKIMDAVKLFDEMVKM-GHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KP+VV +N +I C+++ A+ F EM ++G P+V ++++++ GF +
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E ++ +M+E + VT IL+DGLC + + +A + + +G+ P + Y L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ C A ++ + + +KG P+V + LI G + + EA GL+ +M + +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C VGR +A L + GL P+ +TY I++ G + E
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L+ M + P++ Y ++G+
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGM 335
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 139/264 (52%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + ++P +VTFN L+SG C K A+ LF EM + G P+V++++T+I G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + +M E GC+ + V ++D LC + V +A + + + G+ P F Y
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C G A + ++ ++ +P+ + T LI+GL + R EA + E M ++G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+N L++ C + +A +L + KG P+ +Y+IL++G+ + R E +
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
L+ EM + PD+ TY++ M G
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRG 264
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%)
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ G+ P + L+ LC + A+++ DE+ K G+ P VI +T+I GL ++
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
A L++KM ++G P+ V +N +++ LC +A +G+ PD TY ++
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G+ R E +L +M++ IP+ T+ +DGL R
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKR 164
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%)
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
++K G P+++ TL+ GL K ++A L ++M+K G PD +T++ ++ LC +G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
T A +L KG P+ + Y+ ++ ++ E + +EM+ EG PD+ TY+S
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 476 YMDGLSN 482
+ G N
Sbjct: 121 ILHGFCN 127
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 149/287 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V Y +LI+ F K ++A D M + + V +N LIS C+++K AL
Sbjct: 439 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 498
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M KGC P++ +FN+LI G KF+E + + +M+ G +++T L+
Sbjct: 499 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 558
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +LV D RG D Y GL++ LC GN L + +++ KG P+ I
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 618
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+C LI GL R A + M+ G+ PD VT+N L+ LC GR +A L
Sbjct: 619 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 678
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+G+ PD +TY+ L+S + +E + L++ +D GFIP+ T+
Sbjct: 679 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 725
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 1/296 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ F K R+ + + M +V YN LI+ K + AL + M
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG-YNCLISALCKDEKVQDALNMFGDM 503
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPD+ TFN LI G C+ KF+ ALGL+++M +G N +++NTLI F
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + +M+ GC +T L+ LC G + K L D +G+ P + L
Sbjct: 564 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNIL 623
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC GN ALE + ++ +G P ++ +LI GL + + EA L +K+ EGI
Sbjct: 624 INGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGI 683
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
PD++T+N L+ C G DA L G P+ +T++ILVS + +E ++
Sbjct: 684 CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V ++N LING+V D+A ++ M+ PD+ T+N LI G C+ A
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM+ KGC PNV+++ LI F E + +E N+ EM G ++V L+ LC
Sbjct: 429 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALC 488
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +V A + D S +G P F + L+ LC AL + ++ +G + + I
Sbjct: 489 KDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI R EA L+ ML G D +T+N L++ LC G L
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM 608
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+KGL+P+ ++ +IL++G R + + +M+ G PD+ TYNS ++GL ++
Sbjct: 609 MSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 668
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 6/329 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++A K R+N+ +L L+ P V+ +N I+G K +A DR
Sbjct: 272 VYQTLIHALSKVGRVNE-VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDR 330
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+ T+ +L+ G CR K D A R + K NPNVV FNTLI G+ +
Sbjct: 331 MLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGR 386
Query: 276 FDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + +E M+ +GC T L+ GLC +G ++ A EL+ + +G P Y
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+++ C EG A V+DE+ KG + + LI L + K +A + M +
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD TFN L+ LC V + +A L +G+ + +TY+ L+ + R +E
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
LVN+ML G D TYN + L A
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRA 595
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 180/457 (39%), Gaps = 61/457 (13%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
+ITP L KL P +F WA T + H + ++ L ++ F
Sbjct: 93 RITPYQL-----CKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKT 147
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
++L + +GI E +F + + +A MR +
Sbjct: 148 TDALLMQMK-------QEGIVF---RESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCE 197
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YNV+++ + + M+ + P V TF +++ C + D A L
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M GC PN + + TLI + +E + + EM+ +GC T + GLC
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE---LWKKGNLPS 364
R+ +A +LV RG P F Y L+ LC G VDE L K P+
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK-------VDEARMLLNKVPNPN 370
Query: 365 VIACTTLIEGLRRLRKGVEASGLM-EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ TLI G + EA +M E ML G PD T+N L+ LC G V A L
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI---------------- 467
KG +P+ +TY IL+ + +E R +E N+++EM +G
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490
Query: 468 -------------------PDLATYNSYMDGLSNARK 485
PD+ T+NS + GL K
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 162/343 (47%), Gaps = 39/343 (11%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +RK IDG+ +V +YN +I+ K + A Y +M+ ++ PDVVTF+ LI
Sbjct: 192 ALQMLRK-IDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALI 250
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC + + A GLFREM K NP+ +FN L+ E NM M++ G
Sbjct: 251 YGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVM 310
Query: 293 FSSVTCEILVDGLCNEGRVLKA-------------------CELVIDFSR---------- 323
+ VT L+DG C +V KA C ++ F +
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370
Query: 324 ------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+G+ P Y L++ LC G A E+VDE+ G ++ LI+ L +
Sbjct: 371 FNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCK 430
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+A L++K+ +GI PD TFN L+ LC VGR +A + +KG + T
Sbjct: 431 NHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWT 490
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+I+V+G +E E E L+++M D G IPD TY + + L
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQAL 533
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 37/324 (11%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+E ++I + P V ++ LI GF + ++A G + MV + PD TFNIL+
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFN----------------------------- 264
C+ A + M ++G PNVV+++
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 265 ------TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
T+I GF + DE +++ +M G VT L+DGLC GR+ A ELV
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ G F Y L++ LC + A+ +V ++ +G P + LI GL ++
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ A + + +L +G ++ T+N ++ LC G +A+ L G+ PD +TY
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526
Query: 439 HILVSGYTRENRRKEGENLVNEML 462
L+ ++ ++ E L+ EM+
Sbjct: 527 ETLIQALFHKDENEKAEKLLREMI 550
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N + MN AF M K++ P +N LI G + +AL F+D
Sbjct: 106 FNILINCYCHMAEMN---FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHD 162
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ D ++ LI+G C+ + AL + R++ K NVV +NT+I +
Sbjct: 163 HVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHK 222
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +MI VT L+ G C G++ +A L + + + P + +
Sbjct: 223 LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LV+ LC EGN A ++ + K+G +P+V+ ++L++G + + +A ++ + +
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++ ++ ++ C + +A L KG+ PD +TY+ L+ G + R
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
LV+EM D G ++ TYN +D L
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDAL 428
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 5/241 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + N++N + ++ P+ Y +INGF K + D+AL ++ M
Sbjct: 320 MDGYCLVNQVNKAKHVLNTISQM-GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD VT+N LI G C++ + A L EM + G N+ ++N LI D+ +
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ ++ + G + T IL+ GLC GR+ A ++ D +G + Y +V L
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG A ++ ++ G +P + TLI+ L + +A EK+L+E I D
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKA----EKLLREMIARDV 554
Query: 401 V 401
V
Sbjct: 555 V 555
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 205/410 (50%), Gaps = 16/410 (3%)
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN 144
P+ + IF+ + SF+ +TF ++ + A S F+ L VLN +
Sbjct: 48 EPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLE------ 101
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
+ +FS E+ F A+ KA+ N + F M +P+V +N ++N ++
Sbjct: 102 NRVFS----EKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAG 157
Query: 205 EFDKALGFYDRMVRDR---VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
D+AL FY+ +V + + P+V++FN++I C+ D A+ LFREM + C P+
Sbjct: 158 FHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAY 217
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++ TL+ G + DE V++ EM GC S T +L++GLC +G + +LV +
Sbjct: 218 TYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNM 277
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+G +P + Y L+ LC +G AL ++D + +P+ + T+I GL + +
Sbjct: 278 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRA 337
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
++ + ++ M + G + + ++ L+ L G++ +A RL + KG + + Y L
Sbjct: 338 LDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSAL 397
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG---LSNARKSVR 488
V G R+ + E +++EM D+G P+ T++S M G + N+ K++
Sbjct: 398 VDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIE 447
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 168/355 (47%), Gaps = 40/355 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K +R+++ + + M+ I+G PS + +NVLING K +F + D M
Sbjct: 223 MDGLCKVDRIDEAVSLLDEMQ--IEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLK 280
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT-------------- 265
P+ VT+N LI G C K D AL L M C PN V++ T
Sbjct: 281 GCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDG 340
Query: 266 ---------------------LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L+ G F E K +E + + E ++ GC+ ++V LVDG
Sbjct: 341 ARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDG 400
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC + + +A +++ + + +G P F + L++ GN+ A+EV ++ K +
Sbjct: 401 LCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAEN 460
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-- 422
+ + LI GL + K +EA + KML G PD V ++ +++ LCD G +A +L
Sbjct: 461 EVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYN 520
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+L PD +TY+IL + +++ +L+N MLD G PDL T N ++
Sbjct: 521 EMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 5/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + + K +++ + F M RK + P Y L++G K D+A+ D
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCV---PDAYTYCTLMDGLCKVDRIDEAVSLLD 240
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P TFN+LI+G C+ F L M KGC PN V++NTLI G +
Sbjct: 241 EMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 300
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ +++ M+ C + VT +++GL +GR L +++ RG + ++ Y
Sbjct: 301 KLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYS 360
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LV L EG + A+ + E KG + + + L++GL R RK EA ++ +M +
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++ TF+ L++ +VG + A + + + + Y +L+ G ++ + E
Sbjct: 421 GCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEA 480
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +ML G PD+ Y+S + GL +A
Sbjct: 481 MMVWAKMLATGCRPDVVAYSSMIQGLCDA 509
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 27/343 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C E + +N VK R DG +L R I +Y+VL++G K + +
Sbjct: 317 CVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNE---YVYSVLVSGLFKEGKSE 373
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A+ + + K + V ++ L+ G CR++K D A+ + EM +KGC PN +F++L+
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+GFF + + + +M ++ C + V +L+ GLC +G+V++A + G
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELW--KKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y +++ LC G+ AL++ +E+ + + P VI L L + A
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAV 553
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP--DGMTY-HILV 442
L+ ML G PD VT N LR+L + LDP DG + LV
Sbjct: 554 DLLNSMLDRGCDPDLVTCNIF---------------LRML--REKLDPPQDGAKFLDELV 596
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ R +V ML + P +T+ + L +K
Sbjct: 597 VRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKK 639
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 143/308 (46%), Gaps = 10/308 (3%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
S + LI + +F+ +RM + +RV + +F ++ + + + A+ LF
Sbjct: 73 STFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEK-SFFVMFKAYGKAHLPNKAIELFY 131
Query: 250 EMR-EKGCNPNVVSFNT----LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
M E C P V SFN+ +I+ F +R E N ++ + ++ +++
Sbjct: 132 RMSFEFYCKPTVKSFNSVLNVIIQAGFHDRAL-EFYNHVVGAKDMNILPNVLSFNLIIKS 190
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+C G V A EL + R +P + Y L++ LC A+ ++DE+ +G PS
Sbjct: 191 MCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPS 250
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLR 423
LI GL + + L++ M +G +P+ VT+N L+ LC G+ A L
Sbjct: 251 PATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLD 310
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ S+K + P+ +TY +++G ++ R +G ++ M + G+I + Y+ + GL
Sbjct: 311 RMVSSKCV-PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKE 369
Query: 484 RKSVRQTR 491
KS R
Sbjct: 370 GKSEEAMR 377
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 22/215 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
+C E E + ++ K ++ + ++ + M L G RP V Y+ +I G
Sbjct: 455 INCAENEVCYSVLIHGLCKDGKVMEAMMVWAKM--LATGCRPDVVAYSSMIQGLCDAGSV 512
Query: 207 DKALGFYDRMV--RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
++AL Y+ M+ +PDV+T+NIL + C+ A+ L M ++GC+P++V+ N
Sbjct: 513 EEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN 572
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+R K D + A + E LV L R L A ++V ++
Sbjct: 573 IFLRML--REKLDPPQDGAKFLDE------------LVVRLLKRQRNLGASKIVEVMLQK 618
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ PK + +V +LC V+D+ W K
Sbjct: 619 FLSPKASTWARVVHELCQPKKIQ---AVIDKCWSK 650
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 162/296 (54%), Gaps = 2/296 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LI+G+ E + AL ++ M +R P+V T+ LI G C++ K + A+ L
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M E G PNVV++ LI+G E + + M G + T +L+D LC
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+V +A + ++GV + Y L++ LC G A E++ ++ +G +P +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDADRLRLLA 426
++LI+GL R +K +A+ ++E M+++GI VT+ ++++L +VG +
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+T G++PD +TY + V Y E R ++ E+++ +M+D G P+L TYN+ + G +N
Sbjct: 450 AT-GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYAN 504
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++G + +A+ + M D PD + ++ G C + + A L E
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PN+V +N LI G+ + + + + M C + T L+ GLC G+V
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L G+ P Y L++ C EG+ A ++ + G +P+ + LI
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K EA + ++K+G+ + V + L++ LC G+ AD L ++G
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +Y L+ G R+ + + ++ +M+++G TY +D L
Sbjct: 385 PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 141/351 (40%), Gaps = 37/351 (10%)
Query: 177 FEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
F M L P+ ++ Y LIN + + A ++ + PD + + G
Sbjct: 57 FPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLG 116
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR A +F M +GC ++ L+ G G E + + M C
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ +V GLC GR +A L+ + G P Y L++ C G AL+V +
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ P+V T LI GL + K A L +M++ G+ P+ VT+ L++ C+ G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE------------------- 455
A RL L T GL P+ T+ +L+ + + +E +
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356
Query: 456 ----------------NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
L+ +M+ EGF+PD +Y+S +DGL +K + T
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 145/357 (40%), Gaps = 77/357 (21%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGF 212
+++ ++ + A M L FE M DG P+V Y LI+G K + ++A+
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGM----DGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 213 YDRMVRDRVKPDVVT-----------------------------------FNILISGFCR 237
+ RMV ++P+VVT F++LI C+
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+K + A + +KG N V + +LI G K D + +MI G + +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+DGLC + ++ +A ++ D +G+ Y ++++L E +
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS----------- 438
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
EG ++ + +KM+ GI PD VT+ + C+ GR
Sbjct: 439 ---------------EGPKK---------IFDKMIATGINPDIVTYTVFVRSYCEEGRME 474
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
DA+ + + +G+ P+ +TY+ L+ GY + + M+ +G+ P+ +Y
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYT 531
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 147/342 (42%), Gaps = 16/342 (4%)
Query: 161 VNAFVKANRMNDGLLAFE-AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ + +++ L E M K I P Y ++I+ V+ + +D+M+
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVT--YTIIIDELVREVGSEGPKKIFDKMIAT 451
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD+VT+ + + +C + + A + +M ++G PN+V++NTLIRG+ +
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Query: 280 VNMAYEMIELGC----EFSSVTCEILVDGLCNEGRV-------LKACELVIDFSRRGVLP 328
+ M+ G + +V ++V ++ V +K +++++ LP
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLP 571
Query: 329 KDFD-YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
D Y + LC A + PS T++I+ RL+ +A L
Sbjct: 572 LAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTL 631
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ M K G LP ++ ++ LC+ G A + K + D + + IL+ G +
Sbjct: 632 LDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQ 691
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
+ E +L++ M + G+ P T N+ + G V++
Sbjct: 692 KGSVAEFSSLLSVMKEHGYQPS-NTINAMITGEITVTNEVQE 732
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 4/231 (1%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P + NTL+ R F + ++A M T L++ C G + A +
Sbjct: 39 PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ G+ P + Y V C G A V + +G L + T L+ GL
Sbjct: 95 LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
EA + M + PD+ + ++ LC+ GRT +A+ L A + G +P+ +
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
Y+ L+ GY + + M P++ TY + GL + K R
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + + V+ING + + D+A +R VR +PD VT+N+ I G C+ ++ D A L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M EK C P V++ L+ G + DE + + +M+E G + T +++DGL
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN------ 361
GRV +A + +D G P F Y L++ LC G E L+K+ N
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKP----EEAYALYKEANARKHHA 180
Query: 362 --LPSVIACTTLIEGLRRLRKGVEASGLM-EKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+P V+ T+LI+GL + + +EA + ++ ++ G +PD+VT+ +++ LC +GR +
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+G +PD +TY L+ G+ + + + +ML G + TYN +D
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300
Query: 479 GLSNA 483
GL A
Sbjct: 301 GLCKA 305
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 174/385 (45%), Gaps = 20/385 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D F ++ L R E SVL A C D + ++ ++ KA
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLE--RAVRAGCEPDYV--------TYNVFIDGLCKA 55
Query: 168 NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
R++D AF+ ++K+ + + P+ Y L++G +K D+A+ ++MV P +
Sbjct: 56 ERVDD---AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTL 112
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+ ++I G + + + A +F +M GC P+ + LI+G K +E + E
Sbjct: 113 KTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE 172
Query: 286 MIELGCEFSSV----TCEILVDGLCNEGRVLKACELVIDFS-RRGVLPKDFDYFGLVEKL 340
++V T L+DGLC GR+L+A ++ D + RG +P Y +++ L
Sbjct: 173 ANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGL 232
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G E E+ +G P + LI+G + + +A + +ML+ G + +
Sbjct: 233 CKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 292
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N +L+ LC GR +A L +G +TY L+ G+ E L
Sbjct: 293 VTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRR 352
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
MLD G P+L +YN + GL A K
Sbjct: 353 MLDRGCEPNLVSYNIIIRGLCRAGK 377
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 4/299 (1%)
Query: 188 PSVSIYNVLINGFVKC-REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V Y LI+G K R + F D V PD VT+ +I G C+ + +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F EMR +G P+ V++ LI GF + + + +M++ G S+VT I++DGLC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GRV +A + RG + Y L++ C EGN A+E+ + +G P+++
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I GL R K +A EK+L+ + PD TFN L LC TV +D + L
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTV-SDGVELFE 422
Query: 427 S--TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
S ++G P+ +Y IL+ G R + + EM+ G PD+ +N+ + L A
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 144/310 (46%), Gaps = 5/310 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R+ +G F MR P Y LI+GF+K + KA Y +M++
Sbjct: 229 IDGLCKLGRVEEGCERFHEMRNR-GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
VT+NI++ G C+ + A F M E+GC VV+++ L+ GF E V
Sbjct: 288 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 347
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M++ GCE + V+ I++ GLC G++ KA +R + P + + + L
Sbjct: 348 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407
Query: 341 CGE-GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C +E+ + + +G P++ + + L++G+ R A + +M+ G+ PD
Sbjct: 408 CQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPD 467
Query: 400 SVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
V FN L+ LC GR +A + R L PD +Y L+ G +R R +E L
Sbjct: 468 VVVFNTLIRWLCIAGRVDEALEVFRELERRSA--PDAWSYWSLLDGLSRCERMEEARLLS 525
Query: 459 NEMLDEGFIP 468
M +G P
Sbjct: 526 FHMKLQGCAP 535
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 5/230 (2%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C+P++V+F +I G E++ DE ++ + GCE VT + +DGLC RV A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+L+ + LP Y LV+ L G A+ V++++ +KGN P++ T +I+GL
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG----L 431
+ + EA + ML G PD+ + L++ LC G+ +A L A+ +
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLV-NEMLDEGFIPDLATYNSYMDGL 480
PD +TY L+ G + R E + +E ++ GFIPD TY S +DGL
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGL 232
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 7/245 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ KA R+ + F AM + +V Y+ L++GF A+ + RM
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEER-GCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +P++V++NI+I G CR K A F ++ ++ P+V +FN + G ++
Sbjct: 354 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC--QRL 411
Query: 277 D---EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D +GV + M+ G + + IL+DG+C G + A E+ + RGV P +
Sbjct: 412 DTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVF 471
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC G ALEV EL ++ + P + +L++GL R + EA L M
Sbjct: 472 NTLIRWLCIAGRVDEALEVFRELERR-SAPDAWSYWSLLDGLSRCERMEEARLLSFHMKL 530
Query: 394 EGILP 398
+G P
Sbjct: 531 QGCAP 535
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDK---ALG 211
++ + +A ++ FE KL+ R P V +N ++G C+ D +
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFE---KLLQRRLCPDVYTFNAFLHGL--CQRLDTVSDGVE 419
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ MV P++ +++IL+ G CR ++AL +FREM +G P+VV FNTLIR
Sbjct: 420 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLC 479
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ DE + + E+ E + + L+DGL R+ +A L +G P+ +
Sbjct: 480 IAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHY 538
Query: 332 D 332
D
Sbjct: 539 D 539
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD + + ++++G RE R E +++ + G PD TYN ++DGL A +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAER 57
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 158/336 (47%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C + V+ F K R+ D L + M P +N L+NG K
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A+ D M+++ PDV T+N +ISG C+ + A+ +M + C+PN V++NTLI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLI 372
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
E + +E +A + G T L+ GLC A EL + +G
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P +F Y L++ LC +G AL ++ ++ G SVI TLI+G + K EA +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEI 492
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M G+ +SVT+N L++ LC R DA +L +G PD TY+ L++ + R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCR 552
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K+ ++V M G PD+ TY + + GL A
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 209/458 (45%), Gaps = 37/458 (8%)
Query: 41 SVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSS------------LLHFLKSKLHHHPQF 88
+VTLT HH+ L+ LTP ++ I+ +S LL L+S+
Sbjct: 17 AVTLT---HHSFSLK------LTPPSSTISFASPNSAALSSSDVKLLDSLRSQADDSAAL 67
Query: 89 THYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIF 148
+F AS +F + + I+ L S F ++ +L + + C +
Sbjct: 68 -----RLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCE-----MG 117
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+ P F + ++ + ++ L M +P YN ++N V
Sbjct: 118 TSP-----FLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
+ +M +KPDV TFN+LI CR + A+ + +M G P+ +F T+++
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVL 327
G+ E D + + +M+E GC +S+V+ ++V G C EGRV A + + S + G
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + + LV LC G+ A+E++D + ++G P V ++I GL +L + EA
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+++M+ P++VT+N L+ LC + +A L + ++KG+ PD T++ L+ G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L EM +G PD TYN +D L + K
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 172/362 (47%), Gaps = 9/362 (2%)
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
+ LNFI + DG F P+ + F+ VN KA + + + M L +G
Sbjct: 275 VEDALNFIQEMS---NQDGFF--PD-QYTFNTLVNGLCKAGHVKHAIEIMDVM--LQEGY 326
Query: 188 -PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN +I+G K E +A+ F D+M+ P+ VT+N LIS C+ + + A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L R + KG P+V +FN+LI+G R + + EM GCE T +L+D LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++G++ +A ++ G Y L++ C A E+ DE+ G + +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+GL + R+ +AS LM++M+ EG PD T+N LL C G A +
Sbjct: 507 TYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ G +PD +TY L+SG + R + L+ + +G YN + GL RK+
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKT 626
Query: 487 VR 488
Sbjct: 627 TE 628
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 13/273 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SL S + E ++L + + C S ++ ++ F KA
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS----------VITYNTLIDGFCKA 483
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N++ + F+ M R SV+ YN LI+G K R + A D+M+ + KPD T
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVT-YNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFT 542
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N L++ FCR A + + M GC P++V++ TLI G + + + +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKLC-GEGN 345
G + ++ GL + + +A L + + P Y + LC G G
Sbjct: 603 MKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGP 662
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
A++ + EL +KG +P + L EGL L
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 151/292 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +N+LI GF + E +A+ FY M V PDVV+F+ LI F R + D A
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
REM+ G P+ V + +I GF E + + EM+ GC VT L++GLC
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ R+L A +L+ + RGV P + L+ C +GN AL++ D L ++ P V+
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+LI+G+ R +A+ L + M ILP+ +T++ L++ C+ G+ DA
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG P+ TY+ ++ GY R K+G+ + +M + PDL T+N+ + G
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 150/299 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY ++I GF + +AL D MV PDVVT+N L++G C+ + A L
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKL 389
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E+G P++ +F TLI G+ + F+ + + ++ VT L+DG+C
Sbjct: 390 LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCR 449
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + KA EL D R +LP Y L++ C +G A +DE+ KKGNLP++
Sbjct: 450 KGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRT 509
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++I+G R + ++KM ++ + PD +TFN L+ A + +
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + PD +TY+++++G++ + ++ + M D G PD TY S ++G A S
Sbjct: 570 KEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNS 628
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 36/322 (11%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C ++ +N K +R+ D M + P + + LI+G+ + F+
Sbjct: 361 FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER-GVTPDLCTFTTLIHGYCRQGNFE 419
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
AL +D ++R R++PDVVT+N LI G CR A L+ +M + PN ++++
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYS--- 476
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
IL+D C +G+V A + + ++G L
Sbjct: 477 --------------------------------ILIDSHCEKGQVEDAFGFLDEMVKKGNL 504
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y +++ C GN + + ++ + P +I TLI G + A +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
M KE + PD+VT+N ++ + G DA R+ G++PD TY L++G+
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624
Query: 448 ENRRKEGENLVNEMLDEGFIPD 469
K+ L +EM+ GF PD
Sbjct: 625 AGNSKQAFQLHDEMIHRGFAPD 646
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 154/363 (42%), Gaps = 40/363 (11%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGF 212
++F + + ++ + + AFEA R L+D R V S N L+ + A
Sbjct: 88 QVFDLLIRTYTQSRKPRE---AFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKF------------------------------- 241
Y ++ + + T NI++ +C+ +F
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 242 ----DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
D A+ L M +G P +V++N++++G R+FD+ + M + +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
IL+ G C G V +A + + R V P + L+ G A + E+
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G +P + T +I G R EA + ++M+ G LPD VT+N LL LC R +
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
DA++L +G+ PD T+ L+ GY R+ + L + +L + PD+ TYNS +
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Query: 478 DGL 480
DG+
Sbjct: 445 DGM 447
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 37/294 (12%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P F++LI + +++K A FR + + P S + + +
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRV-PVPASASNALLAVLSRAGWPHLAQE 143
Query: 283 AYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
AY ++ E ++ T I+V C A ++ + +R V P + L++
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ A+ +VD + +G P ++ ++++GL + R+ +A + M + + PD
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263
Query: 402 TFNCLLEDLCDVGRTVDADRL---------------------------------RLLAST 428
+FN L+ C VG +A + L
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323
Query: 429 KGLD--PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL PDG+ Y +++ G+ R E + +EM+ G +PD+ TYN+ ++GL
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGL 377
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I G+ + K F +M +D V PD++TFN LI G+ + + A +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M ++ P+ V++N +I GF + + + M + G E T L++G
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
G +A +L + RG P D
Sbjct: 625 AGNSKQAFQLHDEMIHRGFAPDD 647
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 172/340 (50%), Gaps = 15/340 (4%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P++E +H ++A + RM + F AM P + YNVL++G+ K + +A
Sbjct: 174 PDLES-YHILLSALSDSGRMAEAHALFSAM----TCSPDIMTYNVLMDGYCKIGQTYEAQ 228
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+++ +P+V T++I+I+ +C+ K + A +F +M E C PN V+FNTLI GF
Sbjct: 229 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 288
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE-GRVLKACELVIDFSRRGVLPK 329
++ + + EM ++GC+ + VT L+D LC + G V A +L G+ P
Sbjct: 289 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 348
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ C A++ DE+ K P+VI + LI+GL ++R+ EA+ +E
Sbjct: 349 IVTYNSLIQGFCDARRLSEAMQYFDEMEGKCA-PNVITYSILIDGLCKVRRMKEAAKTLE 407
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPDGMTYHILVSGY 445
M G P VT+ L+ C G A ++++L G P+ + ++ L+ G
Sbjct: 408 DMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKL----AGCAPNTVIFNTLIDGL 463
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ R +G L+ M EG PD+ TYN + GL +A +
Sbjct: 464 CKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 10/306 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N + K +++ + A+E K+I+ P+ +N LI GF K + A+ +
Sbjct: 246 YSIIINCYCKLDKVEE---AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 302
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKK-FDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M + K +VT+N LI C+ + A+ LF ++ G P +V++N+LI+GF
Sbjct: 303 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDA 362
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+ E + EM E C + +T IL+DGLC R+ +A + + D G P Y
Sbjct: 363 RRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTY 421
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
GL+ C G AL +++ G P+ + TLI+GL + + + L+ M
Sbjct: 422 GGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHA 481
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
EG PD +T+NCL+ LC R DA R L P+ T++ L+ G + + +E
Sbjct: 482 EGCKPDVITYNCLISGLCSANRVEDAQR---LFDGMACAPNVTTFNFLIRGLCAQKKVEE 538
Query: 454 GENLVN 459
N+++
Sbjct: 539 ARNILD 544
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 7/304 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YNVLI GF K + +A+ + M + P+ T N L+ G C + AL L
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FREM+ P S N L+RGFF + + + +M + ++ T +++ GLC
Sbjct: 90 FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149
Query: 308 E----GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
E R+ +A E + GV P Y L+ L G A + + P
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---P 206
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++ L++G ++ + EA LM+++LK G P+ T++ ++ C + + +A +
Sbjct: 207 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 266
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ P+ +T++ L++G+ + ++ L EM G + TYN+ +D L
Sbjct: 267 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 326
Query: 484 RKSV 487
R V
Sbjct: 327 RGGV 330
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 7/294 (2%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L++G V R+ D+AL + ++ P+ T+N+LI GFC+ + A+ +F +M+
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G PN + NTL+ G + + + EM +S + IL+ G GRV
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK----GNLPSVIACT 369
A + D + Y +++ LC E + LE E +K+ G P + +
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
L+ L + EA L M PD +T+N L++ C +G+T +A L
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G +P+ TY I+++ Y + ++ +E + +M++ +P+ T+N+ + G A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 291
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 156/321 (48%), Gaps = 1/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N+ KA +++ F M P V Y++LI+GF K E +A Y +M+
Sbjct: 453 LNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 512
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+V T+N ++G R + A G++ EM GC+P+V++++TLI GF RK D+
Sbjct: 513 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAH 572
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI GC ++VT L+ GLC E + +A EL RG P Y L+
Sbjct: 573 ELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGF 632
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A+EV DE+ KG+ P V+A L++G R K EA L + M+ PD+
Sbjct: 633 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDT 692
Query: 401 VTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V+ N +++ L R DA + + G PD +TY+ L+ G E R E +
Sbjct: 693 VSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFK 752
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
E+ PD +N ++ +
Sbjct: 753 EIDRLKLSPDPHAFNVLLEAI 773
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 166/339 (48%), Gaps = 4/339 (1%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDK 208
CP+M +N KA+++ + + M RK+ S YN L+N K ++ +
Sbjct: 406 CPDMA-THSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464
Query: 209 ALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A + MV +R PDVV+++ILI GFC+ + A L+++M + C PNV ++N +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + + + EM+ GC +T L+ G + +A EL RG
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCR 584
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ LC E A E+ ++ ++G P + TTL+ G + K +A +
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV 644
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M+ +G PD V +NCLL+ G+ +A +L + ++ PD ++++I++ G ++
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704
Query: 448 ENRRKEGENLVNEM-LDEGFIPDLATYNSYMDGLSNARK 485
R + + M D G PDL TYNS + GL ++
Sbjct: 705 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 743
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 144/331 (43%), Gaps = 39/331 (11%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
H + KA R++ L E M K P ++ +++LIN K + +A F M
Sbjct: 378 HSVIQELCKAGRVDSALSLLETMIKR-GYCPDMATHSMLINELCKADKIQEAQEFLQGMD 436
Query: 218 RD--RVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGER 274
R ++N L++ C+ KK A +F M E+ P+VVS++ LI GF
Sbjct: 437 RKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKID 496
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +MI+L C + T ++GL +GR+ A
Sbjct: 497 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA-------------------- 536
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+G V +E+ G P VI +TLI G RK +A L E M+
Sbjct: 537 --------QG-------VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++VT+NCLL LC + +A L +G DPD +TY L+ G+ + ++
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +EM+ +G PD+ YN + G A K
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
Query: 207 DKAL---GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP-NVVS 262
DKA+ + MV+ KPD ++ ++ C+ + D A LF EM + P N V+
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ + G K ++ M E S ++L+ L GR+ KA E ++ +
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
R + P ++++LC G AL +++ + K+G P + + LI L + K
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426
Query: 383 EASGLMEKMLKE--GILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYH 439
EA ++ M ++ ++N LL LC + A + + S + PD ++Y
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
IL+ G+ + + E L +M+D +P++ TYN++++GL
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGL 527
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ YN L++G K + D+A + +MV PD VT+ L+ GFC K + A+
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVE 643
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EM KG +P+VV++N L++GFF K E + M+ C+ +V+ I++DGL
Sbjct: 644 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLS 703
Query: 307 NEGRVLKACELVIDFSR-RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
R+ A E+ + G P Y L+ LCGE A++V E+ + P
Sbjct: 704 KAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDP 763
Query: 366 IACTTLIEGLR 376
A L+E ++
Sbjct: 764 HAFNVLLEAIK 774
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 1/190 (0%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+D L + +A ++ +GV+P F Y LV+ C E N+ A+ E+
Sbjct: 131 TYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEM 190
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
KG PS + E L+ K E S + + L++ + + + LL + +
Sbjct: 191 VDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKA 250
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP-DLATYNS 475
++A +L G PD Y +V + + E L EM E P + + +
Sbjct: 251 IEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTA 310
Query: 476 YMDGLSNARK 485
++ GL + K
Sbjct: 311 FLSGLCKSGK 320
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 2/313 (0%)
Query: 175 LAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + + +L+ + +P+V Y +LI + D+AL D M+ +KPD+ T+N +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ D A + R + KGC P+V+S+N L+R + K++EG + +M C+
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT IL+ LC +G++ +A L+ +G+ P + Y L+ C EG +A+E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + G LP ++ T++ L + K +A + K+ + G P+S ++N + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G + A + L + G+DPD +TY+ ++S RE E L+ +M F P + T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 473 YNSYMDGLSNARK 485
YN + G A +
Sbjct: 511 YNIVLLGFCKAHR 523
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 8/340 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREF 206
F +M +IFH + ++ + L E M RK + P V + LI GF R
Sbjct: 87 FRDTQMLKIFHRSC----RSGNYIESLHLLETMVRKGYN--PDVILCTKLIKGFFTLRNI 140
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ + ++ +PDV +N LI+GFC+ + D A + MR K +P+ V++N +
Sbjct: 141 PKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I K D + + +++ C+ + +T IL++ EG V +A +L+ + RG+
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F Y ++ +C EG A E+V L KG P VI+ L+ L K E
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
LM KM E P+ VT++ L+ LC G+ +A L L KGL PD +Y L++ +
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE R + M+ +G +PD+ YN+ + L K+
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 178/382 (46%), Gaps = 17/382 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F D T+ ++ SL S + VLN + ++ C + + + +
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT------------VITYTI--L 234
Query: 165 VKANRMNDGL-LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
++A + G+ A + M +++ +P + YN +I G K D+A +
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+PDV+++NIL+ K++ L +M + C+PNVV+++ LI + K +E +N
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ M E G + + + L+ C EGR+ A E + G LP +Y ++ LC
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A ALE+ +L + G P+ + T+ L + A ++ +M+ GI PD +
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N ++ LC G +A L + + P +TY+I++ G+ + +R ++ N++ M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 462 LDEGFIPDLATYNSYMDGLSNA 483
+ G P+ TY ++G+ A
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFA 556
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 222/510 (43%), Gaps = 74/510 (14%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLPSVTLTPTA----HHTHLLRFLKTHLLTPTNNQITPS 72
S P +P LP TP +LP + LT + H T L + + L+ P+
Sbjct: 32 SADPALSPLAVLPHLAATP--SLPHLLLTASVAGRPHTTSLSLYSRLKSLSLP----IPT 85
Query: 73 SLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRH----DHTTFLFIVRSLASSYRFSEL 128
+ LH L S L P F +FA D FR TTF ++R L ++ +
Sbjct: 86 ASLHPLLSSLPPAPAFV-----LFA-----DIFRLRLPLSTTTFNIMLRHLCTAGKPVR- 134
Query: 129 HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
L + P P + ++ + F R+ G+ MR+ P
Sbjct: 135 --ALELLRQMPSPNA-----------VTYNTVIAGFCARGRVQAGIEIMREMRERGGIAP 181
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGL 247
Y +I+G+ K + + A +D M+ + +V+P+ V +N LI G+C ++AL
Sbjct: 182 DKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRY 241
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM ++G + V ++N + F E + E + EM E G + T IL++G C
Sbjct: 242 RGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCK 301
Query: 308 EGRVLKACEL------------VIDFS-----------------------RRGVLPKDFD 332
EG+ KA ++ V+ ++ RRG+ P F
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ C G+ A E++ E+ KK P + TL+ GL L + EA GL+E+M
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K GI PD V++N L+ G DA ++R KG +P +TY+ ++ G +
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ E+LV EM+ G PD +TY S ++GL+
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGLTT 511
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+A+R+ I RP + +YN LIN + D+A M + R+ PD VT+N L+ G C
Sbjct: 349 DAVRRGI--RPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCL 406
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A GL EM ++G P++VS+NTLI G+ + + V + EM+ G + +T
Sbjct: 407 LGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ GLC G+ A +LV + G+ P D Y L+E L E
Sbjct: 467 YNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE M ++ R P YN L+ G D+A G + M + ++PD+V++N LIS
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+ A+ + EM KG NP ++++N +I+G + + ++ EM+ G
Sbjct: 438 GYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497
Query: 294 SSVTCEILVDGLCNEGRVLKACELV 318
T L++GL E L A + V
Sbjct: 498 DDSTYISLIEGLTTEDERLAAGDDV 522
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 190/422 (45%), Gaps = 55/422 (13%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+R +H F +++ L + R E ++L + F C ++ V F
Sbjct: 226 WRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPE---------FGCTPNVVSYNTLVKGF 276
Query: 165 VKANRMNDGLLAFEAMR--KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
NR + L M + + P V YN +INGF + + DKA + +M+ +
Sbjct: 277 CNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIP 336
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDVVT+N +I G C+ + D A +F++M +KG P+ ++N LI G+ K+ E V +
Sbjct: 337 PDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRL 396
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF----------- 331
EM E +L+D LC GR +A + R+G+ P
Sbjct: 397 LEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKM 456
Query: 332 ----------DYFGLVEKLCGEGNAGIAL-----------------------EVVDELWK 358
+Y L++ LC G A+ E+V E+
Sbjct: 457 RQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLD 516
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G V+ TL+ L R + +EA L+E ML+ G+ PD +++N L++ C GRT +
Sbjct: 517 QGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDE 576
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A +L + + GL P+ TY+ L+ GY + R + +L+ EML G PD+ TYN+ +
Sbjct: 577 AAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILH 636
Query: 479 GL 480
GL
Sbjct: 637 GL 638
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 150/322 (46%), Gaps = 19/322 (5%)
Query: 167 ANRMNDGLLAFEAMRKLID-----GRP-SVSIYNVLINGFVKCR------EFDKALGFYD 214
A+R G LA KL D RP SV+ +N L+ + E + +D
Sbjct: 122 ADRAQSGSLASHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFD 181
Query: 215 RMVR---DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
RMVR D+V PD T++ILI FCR + + +F + + G N + FN L++G
Sbjct: 182 RMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLC 241
Query: 272 GERKFDEGVN-MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV---IDFSRRGVL 327
++ DE N + + M E GC + V+ LV G CNE R +A EL+ D
Sbjct: 242 DAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCP 301
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y ++ EG A + ++ +G P V+ T+I+GL + + A +
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ML +G+ P + T+NCL+ G+ + RL ST L+PD Y +L+ +
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCK 421
Query: 448 ENRRKEGENLVNEMLDEGFIPD 469
R E N+ + ++ +G PD
Sbjct: 422 NGRCTEARNIFDSVIRKGIKPD 443
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 172/424 (40%), Gaps = 84/424 (19%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGF 200
++D SCP ++ +N F + +++ A+ ++ID P V YN +I+G
Sbjct: 293 ADDQGLSCPPDVVSYNTVINGFFREGQVDK---AYNLFLQMIDRGIPPDVVTYNTVIDGL 349
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF------------------------- 235
K + D+A + +M+ VKP T+N LI G+
Sbjct: 350 CKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDC 409
Query: 236 ----------CRNKK---------------------FDLALGLFREMREKGCNPNVVS-- 262
C+N + D A+ +F +MR++G +PNVV+
Sbjct: 410 FIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYG 469
Query: 263 ------------------FNTLIRGFFG---ERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
FN +I +G K+++ + +EM++ G V L
Sbjct: 470 ALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTL 529
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ LC EGRV++A L+ R GV P Y LV+ C G A +++D + G
Sbjct: 530 MCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGL 589
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+ TL+ G + R+ +A L+ +ML G PD VT+N +L L GR +A
Sbjct: 590 KPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKE 649
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L L D TY+I+++G + N E + + +G + T+N + L
Sbjct: 650 LYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALL 709
Query: 482 NARK 485
K
Sbjct: 710 KGGK 713
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 16/326 (4%)
Query: 150 CPEMERIFHFAVNAFVKANRM-NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
C E IF + +K + M ++ + F+ MR+ G P+V Y LI+ K D
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQ--QGLSPNVVNYGALIDALCKLGRVD 482
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A+ +++M+ + + G C +K++ A L EM ++G +VV FNTL+
Sbjct: 483 DAILKFNQMINE------------VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLM 530
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
E + E + M+ +G ++ LVDG C GR +A +L+ G+
Sbjct: 531 CDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLK 590
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P +F Y L+ C A ++ E+ G P V+ T++ GL + + EA L
Sbjct: 591 PNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
M+ D T+N +L LC +A ++ +KGL +T++I++ +
Sbjct: 651 YLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLK 710
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATY 473
++++ +L + G +PD+ TY
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETY 736
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP V YN L++G D+A D MV +KP+ T+N L+ G+C+ ++ D A
Sbjct: 555 RPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYS 614
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L REM G P+VV++NT++ G F +F E + MI ++ T I+++GLC
Sbjct: 615 LLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC 674
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V +A ++ +G+ + ++ L G A+++ + G +P V
Sbjct: 675 KNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVE 734
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ E L + E L M + G P+S N L+ G A
Sbjct: 735 TYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKL 794
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENL 457
K + T +L+S Y+R ++ ++L
Sbjct: 795 DEKNFSLEASTASMLISLYSRGEYQQLAKSL 825
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P Y L+ C G V + K G + I L++GL ++ EA+
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250
Query: 386 G-LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLD--PDGMTYHIL 441
L+ +M + G P+ V++N L++ C+ R +A + L ++A +GL PD ++Y+ +
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G+ RE + + NL +M+D G PD+ TYN+ +DGL A+
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQ 353
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 321 FSRRGVLPKDFDYFGLVEK----------------LCGEGNAGIALEVVDELWKK---GN 361
F R G L F FGL+ K LC A ++ LW+ G
Sbjct: 205 FCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNIL--LWRMPEFGC 262
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL---PDSVTFNCLLEDLCDVGRTVD 418
P+V++ TL++G + EA L+ M + L PD V++N ++ G+
Sbjct: 263 TPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDK 322
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L L +G+ PD +TY+ ++ G + + + +MLD+G P TYN +
Sbjct: 323 AYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIH 382
Query: 479 G 479
G
Sbjct: 383 G 383
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 160/298 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN L+N K + ++A ++ + + PDVV+++ LI+ R K++ AL +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+ KGC PN+ ++NTL+ +FDE + + EM + GC T L+ L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A L + RG +P F Y L+ L G + A+E+++E+ + G P V+
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++LI GL + + V+A L ++M + G PDS+TF L++ L GR DA L
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ P +TY+ L++G+ + E NL++EM G PD+ TY+ + GL A +
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 146/298 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ LI G K E KA + M R KPD +TF L+ + + D AL L
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E+G P VV++N LI GF E N+ EM GC+ VT L+ GL
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ +AC+++ + G P Y L+ L G A + D + KG P V+
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI L + + A L E+M GI PD T+ ++ L G+ DADRL
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KGL PD +TY+ ++ R R KE + +M + G +PD+ATY++ + GLS ++
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N+ +A + L M+ +P++ YN L++ K +FD+AL M +
Sbjct: 51 INSLGRAGKWEAALEVVAEMQA-KGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDV T+N LIS + + A LF EMRE+GC P+ ++N+LI G + + +
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM GC +T L+ GL +G +KA +L + RRG P + L++ L
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G ALE++DE+ ++G P V+ LI G ++ VEA L+++M + G PD
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT++CL+ L + +A ++ +G PD +TY+ L++G + + L +
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M +G PD+ TY++ + L A +
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAAR 374
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 160/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NA KA + + L FE + K P V Y+ LIN + +++ AL M
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KP++ T+N L+ + +FD AL L EMR+ GC P+V ++N LI +
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EM E GC + T L+ GL GR KA EL+ + R G P Y L
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L +G A ++ E+ ++G P I T L++ L + + +A L+++M + G+
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P VT+N L+ VG V+A L G PD +TY L++G + ++ E
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ +M EG PD TYN+ ++GL A
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKA 337
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 190/422 (45%), Gaps = 21/422 (4%)
Query: 64 PTNNQITPSSLLHFL-KSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
P+ N +T +SLL+ L K+ Q + W D ++ ++ SL +
Sbjct: 5 PSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTP-------DVVSYSCLINSLGRA 57
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
++ V+ + A C P + ++ V+ KA + ++ L MR
Sbjct: 58 GKWEAALEVVAEMQAKGCK---------PNL-WTYNTLVDCLGKAGQFDEALRLLAEMRD 107
Query: 183 LIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
+G P V YN LI+ K +A + M PD T+N LI G + +
Sbjct: 108 --NGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
A+ L EM GC P+V+++++LI G + + + + EM G + S+T L
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTAL 225
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+D L GRV A EL+ + RGV P Y L+ G+ A ++DE+ + G
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P V+ + LI GL + + EA +++KM KEG PD++T+N L+ L G DA R
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L +KG +PD +TY L++ + R + L EM G PDL TY S + L
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLG 405
Query: 482 NA 483
A
Sbjct: 406 KA 407
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 160/361 (44%), Gaps = 36/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A KA R++D L + M++ +P V YN LI GF K + +A D M
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKER-GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ KPDVVT++ LI+G + + D A + ++M ++GC P+ +++NTLI G
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + M GC VT L+ L RV AC L + G+ P F Y +
Sbjct: 341 NDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSI 400
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L G A + E+ KG P VI + L R + EA + E M + G+
Sbjct: 401 ITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGL 460
Query: 397 LPDSVTFNCLL---------EDLCDV--------------------------GRTVDADR 421
LPD T++ LL +D C + G +A
Sbjct: 461 LPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHE 520
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L A++KGL P +Y+ L+ + R E N + ++ ++G PD+ +Y+S + L
Sbjct: 521 LLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALG 580
Query: 482 N 482
Sbjct: 581 Q 581
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 1/258 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + A KA R+ + FE M + +P + Y +I K + D A + M
Sbjct: 362 YSTLITALGKAARVESACVLFEEMES-VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PDV+T+N ++ R +F A +F +M+E G P+V +++ L+ G ++
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + E+IE GC F S+ + ++ L + G V +A EL+ + +G+ P Y L
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L G A +++L ++G P +++ ++LI L + + A L+E+M K G+
Sbjct: 541 IDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600
Query: 397 LPDSVTFNCLLEDLCDVG 414
+++ L+ L D G
Sbjct: 601 KLSPRSYSNLVRKLQDWG 618
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 11/337 (3%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D T+ ++ L + + E VL + CP D I ++ +N
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCP--PDTI--------TYNTLINGLG 335
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA +ND F+ M K P V Y+ LI K + A ++ M ++PD+
Sbjct: 336 KAGLLNDAGRLFDRM-KSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDL 394
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T+ +I+ + + D A LF EMR KG +P+V+++N + +F E + +
Sbjct: 395 FTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFED 454
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M E G T + L+ GL V AC L+ + +G + +E L GN
Sbjct: 455 MKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGN 514
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A E++ KG P + LI+ L + + EA +E + ++G PD V+++
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSS 574
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
L+ L G+ A L S +GL +Y LV
Sbjct: 575 LISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%)
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT L++ L G+ +A L + P Y L+ L G ALEVV E
Sbjct: 10 VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ KG P++ TL++ L + + EA L+ +M G +PD T+NCL+ L GR
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+A L +G PD TY+ L+ G + R ++ L+ EM G PD+ TY+S
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 476 YMDGLSNARKSVR 488
+ GL ++V+
Sbjct: 190 LITGLGKDGETVK 202
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ L G A + +EL P V++ + LI L R K A +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGY 445
+ +M +G P+ T+N L++ L G+ +A LRLLA + G PD TY+ L+S
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEA--LRLLAEMRDNGCVPDVRTYNCLISTL 124
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ R E L EM + G +PD TYNS + GL +S +
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQK 167
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 2/299 (0%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
RP+ Y +++ G R D+A+ M V+ DVVT+ LI G C + D AL
Sbjct: 111 ARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGAL 170
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L EM G +PNV+ ++ L+RG+ ++ + + EM LG E + +D L
Sbjct: 171 ELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDL 230
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C +GR+ KA ++ +RG+ P Y L+ LC EG+ AL + +E+ KG P V
Sbjct: 231 CKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDV 290
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGIL--PDSVTFNCLLEDLCDVGRTVDADRLR 423
+ TLI GL + + A GL+E+M++ L PD VTFN ++ LC +GR A +R
Sbjct: 291 VTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVR 350
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ + +G + +TY+ L+ G+ R ++ NL++E++ G PD TY+ ++G S
Sbjct: 351 EMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSK 409
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 10/310 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++ +N K + + L A+R +D + P V YN LI G E D A+G
Sbjct: 258 YNVLINCLCKEGSVREAL----ALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLL 313
Query: 214 DRMVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M++ V+PDVVTFN +I G C+ + A+ + M E+GC N+V++N LI GF
Sbjct: 314 EEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFL 373
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
K + +N+ E+I G E S T IL++G V +A + ++RG+ + F
Sbjct: 374 RVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELF 433
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ LC G A+ + +E+ L +V A +T++ G + A L++ M
Sbjct: 434 HYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAV-AYSTMMYGACKSGDIKAAKQLLQDM 492
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L EG+ PD+VT++ L+ +G +A+R+ + G PD + L+ GY+ E +
Sbjct: 493 LDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552
Query: 452 KEGENLVNEM 461
+ +L++EM
Sbjct: 553 NKILDLIHEM 562
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y++LIN F K + ++A +M PDV F+ LI G+ + + L L
Sbjct: 499 PDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDL 558
Query: 248 FREMREKGCNPNVVSFNTLIR 268
EMR K + TL+R
Sbjct: 559 IHEMRAKNVAIDPKFICTLVR 579
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 35/339 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +I+G+ K + D+A GF M ++P+++TFN++I+G CR+ + +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM KG P+ V++NTL+ G+ E F + + + EM+ G + VT L++ +C
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A E RG+ P + Y ++ +G A V++E+ + G +PS++
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG-------------------------------- 395
LI G L + EA GL++ M+ +G
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255
Query: 396 ---ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+LPD+VT++ L++ LC+ R +A + T L PD TY L++ Y +E
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLN 315
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ +L +EM+ +GF+PD TYN ++GL+ +S R
Sbjct: 316 KALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 20/329 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N+ KA +N + F+ M R L P+ Y +INGF + D+A + M R
Sbjct: 130 INSMCKAGNLNRAMEFFDQMHVRGLC---PNERTYTTIINGFAQQGLLDEAYRVLNEMTR 186
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
P +VT+N LI+G C + + A+GL ++M KG P+VVS++T+I GF ++ D
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDR 246
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
M EMI +VT L+ GLC + R+ +AC++ + + P +F Y L+
Sbjct: 247 AFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLIN 306
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EG+ AL + DE+ +KG LP + LI GL + + EA L+ K+ + +P
Sbjct: 307 AYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIP 366
Query: 399 DSVTFNCLLEDLCDV---------------GRTVDADRLRLLASTKGLDPDGMTYHILVS 443
+VT+N L+E+ C++ G +AD++ K P+ Y++++
Sbjct: 367 SAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIH 426
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+ R + L EM+ F+P T
Sbjct: 427 GHCRIGNVLKAYKLYKEMVHVDFVPHTVT 455
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 139/277 (50%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
L F+ M R+ P+VVT+N +I G+C+ K+ D A G R M KG PN+++FN +I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + + E + EM G VT LV+G C EG +A L + R G+ P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L+ +C GN A+E D++ +G P+ TT+I G + EA ++
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+M + G +P VT+N L+ C +GR +A L KG+ PD ++Y ++SG+ R
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ EM+ + +PD TY+S + GL R+
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 158/327 (48%), Gaps = 3/327 (0%)
Query: 157 FHFAVNAFVKANRMND-GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N + R+ + + E RK P YN L+NG+ K F +AL +
Sbjct: 56 FNMIINGLCRDGRLKETSEVLVEMSRK--GYVPDEVTYNTLVNGYCKEGNFHQALVLHAE 113
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR+ + P+VVT+ LI+ C+ + A+ F +M +G PN ++ T+I GF +
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + EM G S VT L++G C GR+ +A L+ D +GVLP Y
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ A ++ E+ K LP + ++LI+GL R+ EA + ++ML
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L+ C G A L KG PD +TY++L++G ++ R KE
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ ++ + IP TYN+ ++ N
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIENCCN 380
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 75/136 (55%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ L E+ + G LP+V+ T+I+G +L++ EA G + M +G+ P+ +TFN ++
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC GR + + + S KG PD +TY+ LV+GY +E + L EM+ G
Sbjct: 61 NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120
Query: 468 PDLATYNSYMDGLSNA 483
P++ TY S ++ + A
Sbjct: 121 PNVVTYTSLINSMCKA 136
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 16/257 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+ + F+ M I P Y LIN + K + +KAL +D M++
Sbjct: 270 IQGLCEQRRLTEACDMFQEMLT-IKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI------------- 267
PD VT+N+LI+G + + A L ++ P+ V++NTLI
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388
Query: 268 --RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+GF + DE + MI + + +++ G C G VLKA +L +
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P LV+ L EG G EV+ ++ + L L+E ++
Sbjct: 449 FVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVF 508
Query: 386 GLMEKMLKEGILPDSVT 402
L+ +M K+G++P + T
Sbjct: 509 NLLTEMAKDGLIPSTGT 525
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 15/236 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y+ LI G + R +A + M+ ++ PD T+ LI+ +C+ + AL L
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHL 320
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERK------------FDEGVNMAYE---MIELGCE 292
EM +KG P+ V++N LI G + + +D+ + A +IE C
Sbjct: 321 HDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN 380
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ LV G C +G + +A ++ + P + Y ++ C GN A ++
Sbjct: 381 IEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKL 440
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
E+ +P + L++ L E + ++ +L+ L D+ L+E
Sbjct: 441 YKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVE 496
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 185/375 (49%), Gaps = 20/375 (5%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++++L + R H + F+ SN G CP + V++ KA ++
Sbjct: 181 TYNILLKALCKNDRVDAAHKL--FVEM-----SNKG---CPPDAVTYTTMVSSLCKAGKI 230
Query: 171 NDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+D + + GR PSV +YN LI+G K + A+ M+ + V P+VV++
Sbjct: 231 DDA--------RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ +I+ C + +LA LF +M +GC+ N+ +F LI+G F K E +++ MI+
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GCE + V L+ GLC+ G + +A ++ R G LP Y L++ G+
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E + + G P+V+ T +++ L + +A+ L+EKM EG P+++TFN ++
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK 462
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR A +L G P+ TY+ L+ R N+ +E L E+ P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 469 DLATYNSYMDGLSNA 483
+L TYN+ + G S A
Sbjct: 523 NLVTYNTVLYGFSRA 537
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 16/385 (4%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F+ + ++F+H +T+ ++ L + +L + DGI C E
Sbjct: 61 FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKM-------DGINCC---ED 110
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F +N + + L F + + +P+V IYN L++ + +F Y
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEF-GCKPTVRIYNHLLDALLSENKFQMINPLYTN 169
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +D + P+V T+NIL+ C+N + D A LF EM KGC P+ V++ T++ K
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ +A + S L+DG+C EGR+ A +L+ + GV P Y
Sbjct: 230 IDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC GN +A + +++ +G ++ T LI+G K EA L + M+++G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ V +N L+ LC G +A ++ G P+ TY IL+ G+ +
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
N M+ G P++ TY +D L
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVL 429
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 2/293 (0%)
Query: 185 DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
DG P+V YN LI+G ++AL D+M R P+V T++ILI GF ++
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + M GC PNVV++ ++ FD+ ++ +M GC +++T +
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK 462
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC GRV A +L+ G LP Y L++ L A + E+ + P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT-VDADRL 422
+++ T++ G R EA L K L G PDS+T+N ++ C G+ + A +
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
++S K PD +TY L+ G +E +++ +++G P+ AT+N+
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNA 635
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 18/281 (6%)
Query: 142 CSN----DGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEAMRKLID--GR 187
CSN + + C +M+R + ++ F K+ D + A E ++I R
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG---DLVGASETWNRMISHGCR 416
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y +++ K FD+A ++M + P+ +TFN I G C N + + A+ L
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKL 476
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M+ GC PN+ ++N L+ F K++E + E+ + + VT ++ G
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSR 536
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK-KGNLPSVI 366
G + +A +L RG P Y ++ C +G IA ++V+ + K P +I
Sbjct: 537 AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDII 596
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
T+LI G EA ++K + +GI P+ T+N L+
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 350 LEVVDELWKKGNLPSVIACTTL----IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+++V + ++ + + C L I G +R+ +A + ++ + G P +N
Sbjct: 90 MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LL+ L + + L GL P+ TY+IL+ + +R L EM ++G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 466 FIPDLATYNSYMDGLSNARK 485
PD TY + + L A K
Sbjct: 210 CPPDAVTYTTMVSSLCKAGK 229
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 172/340 (50%), Gaps = 3/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREF 206
C + +N + K R+ D L + +++ DG P ++ +NG +
Sbjct: 260 MGCSPTSVTVNVLINGYCKLGRVGDALGYIQ--QEIADGFEPDRVTFSTFVNGLCQNGHV 317
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D AL M+++ +PDV T++ +I+ C N + + A G+ +M + GC P+ +FNTL
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I E + +E +++A E+ G + T IL++ LC G A L + G
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L++ LC G AL+++ E+ G S + T+I+GL + R+ EA
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++M GI +++TFN L++ LC+ R DA L ++GL P+ +TY+ +++ Y
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ + +++ M GF D+ TY + ++GL AR++
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRT 597
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 174/377 (46%), Gaps = 14/377 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L ++ E ++N + + C P+ F+ + A
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC---------LPDTT-TFNTLIVALCTE 384
Query: 168 NRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
N++ + L LA E K + P+V +N+LIN K + A+ ++ M PD V
Sbjct: 385 NQLEEALDLARELTVKGLS--PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEV 442
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+NILI C + K AL L +EM GC + V++NT+I G R+ +E + +M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G +++T L+DGLCN R+ A ELV G+ P + Y ++ C +GN
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A +++ + G V+ TLI GL + R+ A L+ M +G+ P +N +
Sbjct: 563 SKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPV 622
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEMLDEG 465
++ L DA L + G PD TY I+ G R KE + + EM D G
Sbjct: 623 IQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNG 682
Query: 466 FIPDLATYNSYMDGLSN 482
FIP+ +++ +GL N
Sbjct: 683 FIPEFSSFRMLAEGLLN 699
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A +A + +L E M D P + + L+ GFV+ + AL RM
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSS-CDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
P VT N+LI+G+C+ + ALG ++ G P+ V+F+T + G
Sbjct: 258 SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV 317
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + M++ GCE T +++ LCN G + +A +V G LP + L
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC E AL++ EL KG P+V LI L ++ A L E+M G
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+++LC G+ A L G +TY+ ++ G + R +E E
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++M G + T+N+ +DGL NA +
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAER 526
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 194/488 (39%), Gaps = 51/488 (10%)
Query: 13 IHNKSPPPPPAPSIPLPSRPETPP-VTLPSVTLTPTAHHTH--LLRFL----KTHLLTPT 65
+H S P A S PLP P LP+ P L+F + L+T
Sbjct: 5 MHLASSSYPRAAS-PLPQVTACPSNAGLPAAARGPWWQRRARFQLKFAAGSEQERLVTAL 63
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
Q P + L L S L D + I+R L ++ F
Sbjct: 64 REQADPEAALRMLNSALARD-----------------DGLTPSRDVYEEIIRKLGTAGAF 106
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA--------VNAFVKANRMNDGLLAF 177
+L VL EM R H + ++ + +D
Sbjct: 107 -DLMKVL-----------------VGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLV 148
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+ + + +YN L+ + + Y M ++PDVVTFN +I CR
Sbjct: 149 SNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCR 208
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
++ A+ + EM P+ +F TL+ GF E + + + M E+GC +SVT
Sbjct: 209 ARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVT 268
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
+L++G C GRV A + G P + V LC G+ AL+V+ +
Sbjct: 269 VNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLML 328
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
++G P V +T+I L + EA G++ +M+ G LPD+ TFN L+ LC +
Sbjct: 329 QEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLE 388
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A L + KGL P+ T++IL++ + L EM G PD TYN +
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILI 448
Query: 478 DGLSNARK 485
D L ++ K
Sbjct: 449 DNLCSSGK 456
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 14/395 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F WA +RHD + ++ L+ + VL ++ I PE
Sbjct: 118 LRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRR-------IERRPE 170
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
F + + ++ +A ++ + + M+K P +SI N I+ V DKA+ F
Sbjct: 171 ---AFGYVMVSYSRAGKLRNAMRVLTMMQK-AGIEPDLSICNTAIHVLVMGNRLDKAVRF 226
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+RM ++P+V+T+N LI G+C + + A+ L EM KGC+P+ +S+ T++ GF
Sbjct: 227 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLC 285
Query: 273 ERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ K + V + E + VT V L G +A E + + R
Sbjct: 286 KEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDK 345
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V C EG A E+V+E++ KG +P V+ T++I GL + RK +A ++ +
Sbjct: 346 VGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQ 405
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K G P++V++ LL LC G +++A + ++ P+ +TY +L+ G+ RE +
Sbjct: 406 MYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGK 465
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +LV EM+ +GF P N + L K
Sbjct: 466 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEK 500
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 1/323 (0%)
Query: 154 ERIFHFAVNAFV-KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
++I ++ V F+ K R+ + L E M K + P YN ++ K D+AL F
Sbjct: 273 DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEF 332
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
R + D V ++ ++ FCR + D A + EM KGC P+VV++ ++I G
Sbjct: 333 LREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQ 392
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
ERK D+ M +M + GC+ ++V+ L++GLC G L+A E++ +P
Sbjct: 393 ERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAIT 452
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ EG + A ++V E+ KKG P+ + LI+ L + K EA ME+ L
Sbjct: 453 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 512
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G + V F ++ C A L PD +TY ++ ++ R +
Sbjct: 513 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572
Query: 453 EGENLVNEMLDEGFIPDLATYNS 475
E L +ML G IP TY +
Sbjct: 573 EATKLAMKMLRVGLIPTPVTYRT 595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL----- 210
I + A++ V NR++ + E M ++++ P+V YN LI G+ + A+
Sbjct: 206 ICNTAIHVLVMGNRLDKAVRFLERM-QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAE 264
Query: 211 -----------------GF-------------YDRMVRD-RVKPDVVTFNILISGFCRNK 239
GF ++M++D + PD VT+N + ++
Sbjct: 265 MPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHG 324
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL RE E+ + V ++ ++ F E + D+ + EM GC VT
Sbjct: 325 HGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYT 384
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+++GLC E +V +A +++ + G P Y L+ LC GN+ A E+++ +
Sbjct: 385 SVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEED 444
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+P+ I + L+ G RR K EA L+ +M+K+G P V N L++ LC + +A
Sbjct: 445 WWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEA 504
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R G + + + ++ G+ +++ + +L+++M PD+ TY + +D
Sbjct: 505 KRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDA 564
Query: 480 L 480
L
Sbjct: 565 L 565
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 171/422 (40%), Gaps = 26/422 (6%)
Query: 54 LRFLKTHLLTPTN---NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHT 110
+R L +L +N +Q+T ++ +H L H F + FR D
Sbjct: 293 VRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALE------FLREAEERRFRVDKV 346
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
+ IV S R + ++N + + C P++ + +N + ++
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGC---------IPDVV-TYTSVINGLCQERKV 396
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ M K +P+ Y L+NG K +A + D P+ +T+++
Sbjct: 397 DQAKKMLRQMYKH-GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 455
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ GF R K A L REM +KG P V N LI+ E K DE + + G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C + V ++ G C + + A L+ D P Y +++ L +G A
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ ++ + G +P+ + T+I R+ + + L+EKML +N ++E L
Sbjct: 576 KLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKL 633
Query: 411 CDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G A +L ++L + +D + T H+L+ Y + N+ M + IP
Sbjct: 634 CSFGNLEQAYKLLGKVLRTASKIDAN--TCHMLIESYLSKGIPLMSYNVACRMFNRNLIP 691
Query: 469 DL 470
DL
Sbjct: 692 DL 693
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 150/287 (52%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+ LI G AL D M+R R PDVVT+ IL+ C+ + A+ L EMR+
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
KGC P++V++N ++ G E + D+ + + GCE ++V+ I++ GLC R
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL+ + ++G P + L+ LC +G ALEV++++ K G P+ ++ L+
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+ +K +A ++ M+ G PD V++N LL LC G A L KG P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++Y+ ++ G T+ + KE L+NEM+ +G PD+ TY++ GL
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 150/299 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +L+ K + +A+ D M PD+VT+N++++G C+ + D A+
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + GC PN VS+N +++G ++++ + EM + GC + VT +L+ LC
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V A E++ + G P Y L+ C + A+ +D + +G P +++
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L R + A L+ ++ +G P +++N +++ L G+T +A L
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+KGL PD +TY + +G RE+R ++ ++ D G P+ YN+ + GL R++
Sbjct: 433 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 491
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+AM+ L + R P + YNV++NG + D A+ F + +P+ V++NI++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C ++++ A L EM +KGC PNVV+FN LI + + + + ++ + GC
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCS 332
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+S++ L+ C + ++ KA + RG P Y L+ LC G +A+E+
Sbjct: 333 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 392
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ +L KG P +I+ T+I+GL + K EA L+ +M+ +G+ PD +T++ + LC
Sbjct: 393 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 452
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R DA R G+ P+ + Y+ ++ G + +L M+ G +P+ +T
Sbjct: 453 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 512
Query: 473 YNSYMDGLS 481
Y ++GL+
Sbjct: 513 YTILIEGLA 521
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 11/314 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN + R++D A E ++ L P+ YN+++ G ++ A
Sbjct: 233 YNVVVNGICQEGRVDD---AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 289
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VVTFN+LIS CR + AL + ++ + GC+PN +S+N L+ F ++
Sbjct: 290 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK 349
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
+++ L G ALE+++E+ KG P +I +T+ GL R+ + A G ++ M
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
GI P++V +N ++ LC T A L G P+ TY IL+ G E
Sbjct: 470 ---GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 526
Query: 452 KEGENLVNEMLDEG 465
KE +L++E+ G
Sbjct: 527 KEARDLLDELCSRG 540
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFC 236
EA R L P V YN ++ G+ + D A R +R V+ D T + LI G C
Sbjct: 116 EARRVLAACGPDVMAYNAMMAGYCGAGQVDAA----RRWCAERAVERDAYTCDTLIRGLC 171
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ AL + EM + C P+VV++ L+ + + + + EM + GC V
Sbjct: 172 GRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 231
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T ++V+G+C EGRV A E + + G P Y +++ LC A E++ E+
Sbjct: 232 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVG 414
+KG P+V+ LI L RKG+ L +E++ K G P+S+++N LL C
Sbjct: 292 GQKGCPPNVVTFNMLISFL--CRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQK 349
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ A L ++G PD ++Y+ L++ R L++++ D+G P L +YN
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409
Query: 475 SYMDGLSNARKS 486
+ +DGL+ A K+
Sbjct: 410 TVIDGLTKAGKT 421
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ KA + + A E + +++ +P + Y+ + G + + A+ +
Sbjct: 408 YNTVIDGLTKAGKTKE---ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 464
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ ++P+ V +N +I G C+ ++ A+ LF M GC PN ++ LI G E
Sbjct: 465 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 524
Query: 275 KFDEGVNMAYEMIELGCEF 293
E ++ E+ G E
Sbjct: 525 LIKEARDLLDELCSRGEEI 543
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 1/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F + +M+ + MR P IY ++I GF + AL D M
Sbjct: 238 FSCLIGLFARRGKMDHAMAYLREMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDVVT+N L++G C+ ++ A GL EMRE+G P++ +F TLI G+ E K
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + + M+ VT L+DG+C +G + KA +L D R + P Y L
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +G A +DE+ KG LP+++ ++I+G R + ++KM+ +
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +T+N L+ + DA +L + + + PD +TY++L++G++ +E
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +M +G PD TY S ++G A S
Sbjct: 537 IFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 187/413 (45%), Gaps = 56/413 (13%)
Query: 120 ASSYRF-----SELHS-VLNFISANPCPCSN----DGIFSCPEMERIFHFAV--NAFVKA 167
A +YR SE+++ LN + N C D + S E +F V N V A
Sbjct: 80 ADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDA 139
Query: 168 N-RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
R D A + ++ +P + YN ++ G + +DKA + M V PD
Sbjct: 140 RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD 199
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER-KFDEGVNMA 283
V +F ILI GFCR + + AL +++EMR +G P++VSF+ LI G F R K D MA
Sbjct: 200 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHA--MA 256
Query: 284 Y-------------------------------------EMIELGCEFSSVTCEILVDGLC 306
Y EM+ GC VT L++GLC
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 316
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R+L A L+ + RGV P + L+ C EG AL++ D + + P ++
Sbjct: 317 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 376
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G+ R +A+ L + M I P+ VT++ L++ C+ G+ DA
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P+ MTY+ ++ GY R +G+ + +M+ PDL TYN+ + G
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 37/343 (10%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+E +++ D P V + +LI GF + E ++AL Y M +KPD+V+F+ LI
Sbjct: 184 AWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 243
Query: 234 GFCRNKKFDLALGLFREMR-----------------------------------EKGCNP 258
F R K D A+ REMR GC P
Sbjct: 244 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+VV++NTL+ G ER+ + + EM E G T L+ G C EG++ KA +L
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ + P Y L++ +C +G+ A ++ D++ + P+ + + LI+
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ +A G +++M+ +GILP+ +T+N +++ C G + + PD +TY
Sbjct: 424 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 483
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L+ GY +E++ + L+N M E PD+ TYN ++G S
Sbjct: 484 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 526
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 1/334 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + F +A M+D L + M P V YN L+NG K R A G +
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVG-CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 330
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD+ TF LI G+C K D AL LF M + P++V++NTLI G +
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ ++ +M + VT IL+D C +G+V A + + +G+LP Y
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C GN + + ++ P +I TLI G + K +A L+ M KE
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD VT+N L+ G +A + KG++PD TY +++G+ KE
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
L +EML G A + N+ +S++Q
Sbjct: 571 QLHDEMLQRGKEKRRAAGTVQFVNIQNSAESLKQ 604
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA +A R + V+ Y N++++ + K EFDK M + V PDVVT N+++
Sbjct: 78 LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 137
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
R + A+ L M KG P +V++N++++G +D+ + EM + G
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ IL+ G C G + +A ++ + RG+ P + L+ G A+
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ E+ G +P + T +I G R +A + ++M+ G LPD VT+N LL LC
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R +DA+ L +G+ PD T+ L+ GY E + + L + ML++ PD+ T
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377
Query: 473 YNSYMDGL 480
YN+ +DG+
Sbjct: 378 YNTLIDGM 385
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
E ++ T I+V C K ++ + +R V P + +V+ G+A A+
Sbjct: 92 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 352 VVDE------------------------LWKK-----------GNLPSVIACTTLIEGLR 376
+VD +W K G P V + T LI G
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
R+ + EA + ++M GI PD V+F+CL+ G+ A GL PDG+
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y +++ G+ R + + +EM+ G +PD+ TYN+ ++GL R+
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 320
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 12/318 (3%)
Query: 175 LAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + +L+ + P+V Y +LI + ++A+ + M+ + PD+ T+N +I
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ + A L + KGC P+V+S+N L+R F + K+DEG + EM GCE
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT IL+ LC GR+ +A ++ + + P + Y L+ LC EG +A+ +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+D + G LP ++ T++ L + +A + K+ G P+ ++N ++ L
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439
Query: 413 VGRTVDADRLRLLAS-----TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G DR R L +KG+DPD +TY+ L+S R+ +E L+++M GF
Sbjct: 440 CG-----DRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494
Query: 468 PDLATYNSYMDGLSNARK 485
P + +YN + GL R+
Sbjct: 495 PTVISYNIVLLGLCKVRR 512
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N KA + N+ L E + P V + LI GF + +KA + ++
Sbjct: 85 LNRSCKAGKFNESLYFLECLVNK-GYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 142
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PDV +N +ISGFC+ + + A + M+ +G P++V++N +I RK +
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +++ C + +T IL++ EG + +A +L+ + RG+LP + Y ++ +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG A E++ L KG P VI+ L+ K E L+ +M G P+
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT++ L+ LC GR +A + + K L PD +Y L+S +E R +++
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ G +PD+ YN+ + L
Sbjct: 383 MISNGCLPDIVNYNTILAAL 402
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 5/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + A + +N+ + E M R L+ P + YN +I G K ++A
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLL---PDMYTYNAIIRGMCKEGMVERAAELIT 276
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ +PDV+++NIL+ F K+D L EM +GC PN V+++ LI
Sbjct: 277 SLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 336
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +++ MIE + + + L+ LC EGR+ A ++ G LP +Y
Sbjct: 337 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 396
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC GNA ALE+ ++L G P+V + T+I L A G++ M+ +
Sbjct: 397 TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 456
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD +T+N L+ LC G +A L G P ++Y+I++ G + R +
Sbjct: 457 GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ EM+++G P+ TY ++G+ A
Sbjct: 517 IGMFAEMIEKGCRPNETTYILLIEGIGFA 545
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++ C+ KF+ +L + KG P+V+ LI+GFF + E + E++E
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNI-EKASRVMEILESH 142
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
E ++ G C ++ A +++ RG LP Y ++ LC G+AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGV-EASGLMEKMLKEGILPDSVTFNCLLED 409
V+D+L +P+VI T LIE + G+ EA L+E+ML G+LPD T+N ++
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEA-TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+C G A L ++KG +PD ++Y+IL+ + + + EGE LV EM G P+
Sbjct: 262 MCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 321
Query: 470 LATYNSYMDGL 480
TY+ + L
Sbjct: 322 KVTYSILISSL 332
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 123/281 (43%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN+L+ F+ ++D+ M +P+ VT++ILIS CR + D A+
Sbjct: 284 EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + M EK P+ S++ LI E + D + + MI GC V ++ LC
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 403
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G +A E+ G P Y ++ L G+ AL +V + KG P I
Sbjct: 404 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEI 463
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI L R EA GL++ M + G P +++N +L LC V R DA +
Sbjct: 464 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 523
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
KG P+ TY +L+ G R E L N + I
Sbjct: 524 IEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA 160
T D++ +D ++ +L R +++++ +N C P++ ++
Sbjct: 354 TPDTYSYDP-----LISALCKEGRLDLAIGIMDYMISNGC---------LPDIVN-YNTI 398
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A K N L F +R + P+VS YN +I+ C + +ALG M+
Sbjct: 399 LAALCKNGNANQALEIFNKLRGM-GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD +T+N LIS CR+ + A+GL +M + G P V+S+N ++ G R+ D+ +
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
M EMIE GC + T +L++G+ G +A EL R V+ +D
Sbjct: 518 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQD 567
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+L+ K R + +A+ D M + P+ VT+N+L+ G C D AL L
Sbjct: 40 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 99
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R + GC P+ V++NT+++G ++ + + EM+ C + T +++ LC
Sbjct: 100 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 159
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A +L+ S+ G Y ++ LC + N A+ ++ ++ G P ++
Sbjct: 160 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 219
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++GL + V+A LM+ M + G LPD+VTFN L+ LC G VDA +
Sbjct: 220 YNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD-----LATYNSYMDGLSN 482
KG P+ +TY ++SG + + + L NEM +GF PD LA + D +
Sbjct: 280 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEE 339
Query: 483 ARKSVRQTR 491
A ++VR+ +
Sbjct: 340 AIQTVRKLQ 348
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YN LI+ + + AL D M+ PDVVT+NIL+ C+ + + A+
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L MR +GC PN V++N L+ G GE D+ + + + GC+ S+V ++ GLC
Sbjct: 64 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ R A ELV + R P + + ++ LC +G A+++++++ K G +++
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+I GL R A GL+ KM G PD VT+N LL+ LC R VDA+ L
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G PD +T++ L+ ++ + + +M D+G P+ TY++ + GL+ A K
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 3/308 (0%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +R L +PS YN ++ G + A M+R+ P+ TFN++I
Sbjct: 96 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 155
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR A+ L +M + GC N+V++N +I G +R D + + +M GC+
Sbjct: 156 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 215
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT L+ GLC+ R + A EL+ + ++ G LP + + L+ LC +G A+EV
Sbjct: 216 DIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 275
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ KG P+ I +T+I GL + K +A L +M +G PD + + L E L D
Sbjct: 276 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDD 334
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+A + G+ P + Y+ ++ G R + + +++ M+ G +PD TY
Sbjct: 335 DTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 394
Query: 474 NSYMDGLS 481
++GL+
Sbjct: 395 VILIEGLA 402
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+P+ T+N LI C + AL + +M +GC P+VV++N
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYN---------------- 46
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDFDYFGLVEK 339
IL++ C +GR + +ID R G P + Y L++
Sbjct: 47 -------------------ILLEATC-KGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 86
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+CGEG+ ALE++ L G PS + T+++GL + +A L+ +ML+E P+
Sbjct: 87 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 146
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
TFN ++ LC G A +L S G + +TY+ +++G + L++
Sbjct: 147 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 206
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSV 487
+M G PD+ TYN+ + GL +A + V
Sbjct: 207 KMKSYGCKPDIVTYNTLLKGLCSAARWV 234
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+CP E F+ + + + + + E M K ++ YN +ING + R D
Sbjct: 142 NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH-GCTANIVTYNAIINGLCEQRNVDG 200
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCR----------------------NKKFDLALG 246
A+G +M KPD+VT+N L+ G C N F+ +G
Sbjct: 201 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIG 260
Query: 247 -------------LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+F++M +KGC PN ++++T+I G K D+ + + EM G
Sbjct: 261 FLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 320
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ ++L + L ++ + +A + V G+ P Y ++ LC G A++++
Sbjct: 321 DKIY-QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 379
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
+ G +P + LIEGL EA L+ K+ +L +S+
Sbjct: 380 AYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSL 427
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N+F NR++ G + KL +P + + LI G + +AL +D+MV
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKL-GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ +P+ VT+ LI G C+ A+ L R M +K C PNV+++NT+I F +R+ +E
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+N+ EMI G + T ++ GLC L+ + ++P + LV+
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC EG IA +VVD + ++G P V+ T L++G + EA + + M+++G P
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ ++++ L+ C + R A L + L P+ +TY+ L+ G R ++ L
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNAR 484
+EM+ G IPDL TY +D L R
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTR 438
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 156/314 (49%), Gaps = 4/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
M +++D + P+V I+ L++ K A D M++ V+PDVVT+ L+ G C
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A +F M KGC PNV+S++TLI G+ ++ D+ + + EM + + VT
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ GR+ A L + G +P Y L++ LC + A+ ++ +
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + + +I+G+ R+ + A L + +G+ PD T+ ++ LC G
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLA 511
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L +T G PD TY+++ G+ R N L+ EML GF D +T +
Sbjct: 512 EATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIV 571
Query: 478 DGLSN--ARKSVRQ 489
+ LS+ +SV+Q
Sbjct: 572 EMLSDDGLDQSVKQ 585
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ K ++N+ L F M + G P+VS YN +I+G K E+ +
Sbjct: 217 YNTIIDCLFKDRQVNEALNIFSEM--IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNE 274
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++ P+VV F L+ C+ +A + M ++G P+VV++ L+ G +
Sbjct: 275 MVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE 334
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + M+ GC + ++ L++G C R+ KA L + +R ++P Y
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G A+ + E+ G +P ++ L++ L + R +A +++ +
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD ++N +++ +C VG A L S+KGL PD TY I+++G + E
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514
Query: 456 NLVNEMLDEGFIPDLATYN 474
L EM +G PD TYN
Sbjct: 515 KLFREMNTDGCSPDDCTYN 533
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 150/318 (47%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N +++ L +F M + PSV + ++ + + L +M + DV T
Sbjct: 53 NTIDEALSSFNRMLHM-QPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYT 111
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
I+I+ FC + D + ++ + G P+ +F TLIRG E K E +++ +M+
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + VT L+ GLC G A L+ ++ P Y +++ L +
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
AL + E+ KG P+V ++I GL + + + LM +M+ I+P+ V F L+
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G A + + +G++PD +TY L+ G+ + E + + + M+ +G
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCA 351
Query: 468 PDLATYNSYMDGLSNARK 485
P++ +Y++ ++G ++
Sbjct: 352 PNVISYSTLINGYCKIQR 369
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 179 AMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
AM K I+G P + YN++I+G + E + A + + + PDV T+ I+I+G
Sbjct: 445 AMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C A LFREM GC+P+ ++N + RGF + + + EM+ G +
Sbjct: 505 CLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADA 564
Query: 296 VTCEILVDGLCNEG 309
T ++V+ L ++G
Sbjct: 565 STITLIVEMLSDDG 578
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-----DVGRTV 417
PSV+ ++ + ++ L ++M GI D T ++ C D G +V
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A +L G PD T+ L+ G E + E +L ++M+ EGF P+ TY + +
Sbjct: 132 LAKIFKL-----GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLI 186
Query: 478 DGL---SNARKSVRQTR 491
GL N+R ++R R
Sbjct: 187 HGLCKVGNSRAAIRLLR 203
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 184/390 (47%), Gaps = 11/390 (2%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
IF D F+H T+ ++ L F + VL N ++G+
Sbjct: 24 LEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNI----DNGL----- 74
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+E ++ A+ + + ++ + + FE M + PSV YN ++N V+ R FD+A
Sbjct: 75 LEGVYIGAMRNYGRKGKIQEAVDVFERM-DFFNCEPSVQSYNAIMNILVEYRYFDQAHKV 133
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RM + PDV TF I + FCR + A L M +GC + V++ T+I GF+
Sbjct: 134 YMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYE 193
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E E + EM+ LG + L+ LC +G V ++ L+ +RGV P F
Sbjct: 194 ENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFT 253
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
++ C A+ ++D + +G P VI TLI GL + K VEA + KM+
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
EG PD T+N +++ C +G +AD++ + KG PD TY L++G ++
Sbjct: 313 NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
N+ NE +++G P+L N+ + GLS
Sbjct: 373 RAINVFNEAMEKGLKPNLVLCNTLVKGLSQ 402
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 185/378 (48%), Gaps = 12/378 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TF ++S + R +LN + + C S + C + F +
Sbjct: 145 DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS--AVAYCT--------VIGGFYEE 194
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N + FE M L P + +N LI+ + ++ +++++ V P++ T
Sbjct: 195 NHRVEAHELFEEMLGL-GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFT 253
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NI I GFC+ + A+ L + +G P+V+++NTLI G K E + +M+
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G E T ++DG C G + A +++ D + +G +P + Y L+ LC +G+
Sbjct: 313 NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ V +E +KG P+++ C TL++GL + ++A LM +M + G PD T+N ++
Sbjct: 373 RAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVI 432
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC +G DAD L + A KG PD T++ L+ GY ++ + +V+ M + G
Sbjct: 433 NGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS 492
Query: 468 PDLATYNSYMDGLSNARK 485
PD+ TYNS ++GL A K
Sbjct: 493 PDVITYNSILNGLCKAGK 510
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 8/329 (2%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDG-----RPSVSIYNVLINGFVKCREFDKALGFY 213
F VN F++ + EA+R L+DG P V YN LI G K + +A +
Sbjct: 252 FTVNIFIQG--FCQRAMLNEAIR-LLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYL 308
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+MV + +PD T+N +I G+C+ A + R+ KG P+ ++ +LI G +
Sbjct: 309 RKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQD 368
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D +N+ E +E G + + V C LV GL +G +L+A +L+ + S G P + Y
Sbjct: 369 GDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTY 428
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ LC G A +V + KG+LP V TLI+G + K A ++++M
Sbjct: 429 NLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWN 488
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD +T+N +L LC G+ D L KG P+ +TY+IL + + + +E
Sbjct: 489 HGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEE 548
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSN 482
NL+ EM ++G PD+ + + M G +
Sbjct: 549 ALNLIEEMQNKGLTPDVVNFGTLMKGFCD 577
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 158/343 (46%), Gaps = 46/343 (13%)
Query: 180 MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV----KPDVVTFNILIS 233
+RK+++ P YN +I+G+ K A D+++RD PD T+ LI+
Sbjct: 308 LRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA----DQILRDGAFKGFVPDESTYCSLIN 363
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C++ D A+ +F E EKG PN+V NTL++G + + + + EM E GC
Sbjct: 364 GLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSP 423
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
T ++++GLC G V A LVID +G LP F + L++ C + A+E+V
Sbjct: 424 DIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIV 483
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D +W G P VI +++ GL + K + G + M+++G +P+ +T+N L E C
Sbjct: 484 DRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKA 543
Query: 414 GRTVDADRLRLLASTKGLDPDGM------------------------------------T 437
+ +A L KGL PD + T
Sbjct: 544 RKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIAT 603
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+I+++ + + E L N+M + GF PD TY +DG
Sbjct: 604 YNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGF 646
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 137/292 (46%), Gaps = 13/292 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGFCRNKKFDL 243
P + YN++ING K A D +V D + PDV TFN LI G+C+ K D
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDA----DNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDN 478
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A+ + M G +P+V+++N+++ G K+++ + M+E GC + +T IL +
Sbjct: 479 AIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTE 538
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---VDELWKKG 360
C +V +A L+ + +G+ P ++ L++ C G+ A ++ VDE +K
Sbjct: 539 SFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFS 598
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+ ++ +I A L KM + G PDS T+ +++ C G
Sbjct: 599 H--TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGY 656
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
L+ KGL P T+ +++ + R E +++ M+ +G +P++
Sbjct: 657 SFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+R + + K E V++ M CE S + +++ L +A ++ + +G+
Sbjct: 83 MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+P + + ++ C A +++ + +G S +A T+I G VEA
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHE 202
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L E+ML GI PD + FN L+ LC G +++RL +G+ P+ T +I + G+
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ E L++ + G PD+ TYN+ + GL K V
Sbjct: 263 QRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVE 303
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N KA + D + F+ M + P++ YN+L F K R+ ++AL + M
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEK-GCVPNIITYNILTESFCKARKVEEALNLIEEM 556
Query: 217 VRDRVKPDVV------------------------------------TFNILISGFCRNKK 240
+ PDVV T+NI+I+ F
Sbjct: 557 QNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLN 616
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
++A LF +M E G +P+ ++ +I GF + G + IE G S T
Sbjct: 617 MNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGR 676
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+++ LC + RV +A ++ +G++P+ + +K VV+ L KKG
Sbjct: 677 VLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEADK----KEVAAPKIVVENLMKKG 732
Query: 361 NLPSVIACTTLIEGLR 376
++ + A L +G+R
Sbjct: 733 HI-TYFAYEILHDGIR 747
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 175 LAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + + +L+ + P+V Y +LI + ++A+ + M+ + PD+ T+N +I
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ + A L + KGC P+V+S+N L+R F + K+DEG + EM GCE
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT IL+ LC GR+ +A ++ + + P + Y L+ LC EG +A+ +
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+D + G LP ++ T++ L + +A + K+ G P+ ++N ++ L
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429
Query: 413 VGRTVDADRLRLLAS-----TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G DR R L +KG+DPD +TY+ L+S R+ +E L+++M GF
Sbjct: 430 CG-----DRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 484
Query: 468 PDLATYNSYMDGLSNARK 485
P + +YN + GL R+
Sbjct: 485 PTVISYNIVLLGLCKVRR 502
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N KA + N+ L E + P V + LI GF + +KA + ++
Sbjct: 75 LNRSCKAGKFNESLYFLECLVNK-GYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 132
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PDV +N +ISGFC+ + + A + M+ +G P++V++N +I RK +
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +++ C + +T IL++ EG + +A +L+ + RG+LP + Y ++ +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG A E++ L KG P VI+ L+ K E L+ +M G P+
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT++ L+ LC GR +A + + K L PD +Y L+S +E R +++
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ G +PD+ YN+ + L
Sbjct: 373 MISNGCLPDIVNYNTILAAL 392
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 5/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + A + +N+ + E M R L+ P + YN +I G K ++A
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLL---PDMYTYNAIIRGMCKEGMVERAAELIT 266
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ KPDV+++NIL+ F K+D L EM +GC PN V+++ LI
Sbjct: 267 SLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 326
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +++ MIE + + + L+ LC EGR+ A ++ G LP +Y
Sbjct: 327 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 386
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC GNA ALE+ ++L G P+V + T+I L A G++ M+ +
Sbjct: 387 TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 446
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD +T+N L+ LC G +A L G P ++Y+I++ G + R +
Sbjct: 447 GVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 506
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ EM+++G P+ TY ++G+ A
Sbjct: 507 IGMFAEMIEKGCRPNETTYILLIEGIGFA 535
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++ C+ KF+ +L + KG P+V+ LI+GFF + E + E++E
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNI-EKASRVMEILESH 132
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
E ++ G C R+ A +++ RG LP Y ++ LC G+AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGV-EASGLMEKMLKEGILPDSVTFNCLLED 409
+V+D+L +P+VI T LIE + G+ EA L+E+ML G+LPD T+N ++
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEA-TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+C G A L ++KG PD ++Y+IL+ + + + EGE LV EM G P+
Sbjct: 252 MCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 311
Query: 470 LATYNSYMDGL 480
TY+ + L
Sbjct: 312 KVTYSILISSL 322
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 124/281 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN+L+ F+ ++D+ M +P+ VT++ILIS CR + D A+
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + M EK P+ S++ LI E + D + + MI GC V ++ LC
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 393
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G +A E+ G P Y ++ L G+ AL +V + KG P I
Sbjct: 394 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEI 453
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI L R EA GL++ M + G P +++N +L LC V R DA +
Sbjct: 454 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 513
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
KG P+ TY +L+ G R E L N + I
Sbjct: 514 IEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA 160
T D++ +D ++ +L R +++++ +N C P++ ++
Sbjct: 344 TPDTYSYDP-----LISALCKEGRLDLAIGIMDYMISNGC---------LPDIVN-YNTI 388
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A K N L F +R + P+VS YN +I+ C + +ALG M+
Sbjct: 389 LAALCKNGNANQALEIFNKLRGM-GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD +T+N LIS CR+ + A+GL +M + G P V+S+N ++ G R+ D+ +
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
M EMIE GC + T +L++G+ G +A EL R V+ +D
Sbjct: 508 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQD 557
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 25/391 (6%)
Query: 103 DSFRHDHT-----TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIF 157
D+ R D T+ +VR+L + R +L+ ++ CP P+ + +
Sbjct: 148 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCP---------PD-DVTY 197
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF--DKALGFYDR 215
V+ K +R+++ AM P + YN ++ CREF +
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMP------PVAASYNAIV--LALCREFRMQEVFSVVSD 249
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++P+V+T+ ++ FC+ + +A + M GC PNVV+F L+RG F + +
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ ++M M+ G S+V+ IL+ GLC+ G + A ++ + G P Y
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G+ G A+ + +++ + G P+V+ T +++ + +A L++KML E
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P++VTFN L+ LCD R A + G P+G TY+ L+ G RE +
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 489
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++V EM G L TYN+ + GL R S
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 520
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 19/347 (5%)
Query: 65 TNNQITPSSLLHFLKSKLHHHPQFTHYDFHIF-AWASTIDSFRHDHTTFLFIVRSLASSY 123
T N +T ++L+ L H + + + WA + S+ ++R L S
Sbjct: 291 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYN-------ILIRGLCSVG 343
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
S+LN + + C P + R + ++ F KA + + + M +
Sbjct: 344 DLKGASSILNSMEQHGC---------FPNV-RTYSTLIDGFSKAGDLGGAISIWNDMSR- 392
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
+P+V +Y +++ F K F++A D+M+ + P+ VTFN LI C ++
Sbjct: 393 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 452
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
ALG+F EMR GC PN ++N LI G F E + ++M EM G E S VT +V
Sbjct: 453 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 512
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC +A V +G+ P F + ++ C EG +A ++ +
Sbjct: 513 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHR 572
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++ T L+ L K V+A + KML EGI P++VT+N L+ +
Sbjct: 573 NILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 3/335 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE 205
I C F V R++D L + M + +G PS YN+LI G +
Sbjct: 287 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM--VAEGWAPSTVSYNILIRGLCSVGD 344
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A + M + P+V T++ LI GF + A+ ++ +M GC PNVV +
Sbjct: 345 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 404
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++ F + F++ ++ +M+ C ++VT L+ LC+ RV +A + + R G
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 464
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P Y L+ L EGN G AL +V E+ G S++ T++ GL + R EA
Sbjct: 465 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 524
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ KM+ +GI P++ TF+ ++ C G A + + + + Y IL++
Sbjct: 525 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 584
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ + + +ML EG P+ T+N + G+
Sbjct: 585 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 5/266 (1%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
YD M +D V P+V T+N+L+ C+N + A + EM KGC P+ V++ T++
Sbjct: 147 YDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK 206
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ DE + M + ++++ V LC E R+ + +V D RG+ P
Sbjct: 207 LDRLDEATEVLAAMPPVAASYNAI-----VLALCREFRMQEVFSVVSDMVGRGLQPNVIT 261
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +V+ C G +A ++ + G P+V+ T L+ GL + +A + M+
Sbjct: 262 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 321
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
EG P +V++N L+ LC VG A + G P+ TY L+ G+++
Sbjct: 322 AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLG 381
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMD 478
++ N+M G P++ Y + +D
Sbjct: 382 GAISIWNDMSRSGCKPNVVVYTNMVD 407
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ MR+ G +PNV ++N L+R + M EM GC VT +V LC
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R+ +A E++ P Y +V LC E VV ++ +G P+VI
Sbjct: 206 KLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TT+++ + + A ++ +M+ G P+ VTF L+ L D GR DA +
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G P ++Y+IL+ G K +++N M G P++ TY++ +DG S A
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 377
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
CGE G + V D + K G P+V L+ L + + A ++++M ++G PD
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ ++ LC + R +A + + P +Y+ +V RE R +E ++V++
Sbjct: 195 VTYATIVSVLCKLDRLDEATEV-----LAAMPPVAASYNAIVLALCREFRMQEVFSVVSD 249
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M+ G P++ TY + +D A
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKA 272
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 32/208 (15%)
Query: 306 CNEGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C E V A LV D R+ GV P F Y LV LC G A +++DE+ +KG P
Sbjct: 135 CGENMV-GAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193
Query: 365 VIACTTLIEGLRRLRKGVEAS------------------------------GLMEKMLKE 394
+ T++ L +L + EA+ ++ M+
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGR 253
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ +++ C G A + G P+ +T+ LV G + R +
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
++ M+ EG+ P +YN + GL +
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCS 341
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 1/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F + +M+ + MR P IY ++I GF + AL D M
Sbjct: 299 FSCLIGLFARRGKMDHAMAYLREMR-CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDVVT+N L++G C+ ++ A GL EMRE+G P++ +F TLI G+ E K
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + + M+ VT L+DG+C +G + KA +L D R + P Y L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +G A +DE+ KG LP+++ ++I+G R + ++KM+ +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +T+N L+ + DA +L + + + PD +TY++L++G++ +E
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +M +G PD TY S ++G A S
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNS 627
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 187/413 (45%), Gaps = 56/413 (13%)
Query: 120 ASSYRF-----SELHS-VLNFISANPCPCSN----DGIFSCPEMERIFHFAV--NAFVKA 167
A +YR SE+++ LN + N C D + S E +F V N V A
Sbjct: 141 ADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDA 200
Query: 168 N-RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
R D A + ++ +P + YN ++ G + +DKA + M V PD
Sbjct: 201 RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD 260
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER-KFDEGVNMA 283
V +F ILI GFCR + + AL +++EMR +G P++VSF+ LI G F R K D MA
Sbjct: 261 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI-GLFARRGKMDHA--MA 317
Query: 284 Y-------------------------------------EMIELGCEFSSVTCEILVDGLC 306
Y EM+ GC VT L++GLC
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 377
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R+L A L+ + RGV P + L+ C EG AL++ D + + P ++
Sbjct: 378 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 437
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G+ R +A+ L + M I P+ VT++ L++ C+ G+ DA
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P+ MTY+ ++ GY R +G+ + +M+ PDL TYN+ + G
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + F +A M+D L + M P V YN L+NG K R A G +
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVG-CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 391
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD+ TF LI G+C K D AL LF M + P++V++NTLI G +
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ ++ +M + VT IL+D C +G+V A + + +G+LP Y
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C GN + + ++ P +I TLI G + K +A L+ M KE
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD VT+N L+ G +A + KG++PD TY +++G+ KE
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631
Query: 456 NLVNEMLDEGFIPD 469
L +EML GF PD
Sbjct: 632 QLHDEMLQRGFAPD 645
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 37/343 (10%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+E +++ D P V + +LI GF + E ++AL Y M +KPD+V+F+ LI
Sbjct: 245 AWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 304
Query: 234 GFCRNKKFDLALGLFREMR-----------------------------------EKGCNP 258
F R K D A+ REMR GC P
Sbjct: 305 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 364
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+VV++NTL+ G ER+ + + EM E G T L+ G C EG++ KA +L
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ + P Y L++ +C +G+ A ++ D++ + P+ + + LI+
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ +A G +++M+ +GILP+ +T+N +++ C G + + PD +TY
Sbjct: 485 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 544
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L+ GY +E++ + L+N M E PD+ TYN ++G S
Sbjct: 545 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 587
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA +A R + V+ Y N++++ + K EFDK M + V PDVVT N+++
Sbjct: 139 LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 198
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
R + A+ L M KG P +V++N++++G +D+ + EM + G
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ IL+ G C G + +A ++ + RG+ P + L+ G A+
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ E+ G +P + T +I G R +A + ++M+ G LPD VT+N LL LC
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R +DA+ L +G+ PD T+ L+ GY E + + L + ML++ PD+ T
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438
Query: 473 YNSYMDGL 480
YN+ +DG+
Sbjct: 439 YNTLIDGM 446
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I G+ + K F +M+ ++V PD++T+N LI G+ + K A L
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++ P+VV++N LI GF E + +M G E T +++G
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
G +A +L + +RG P D
Sbjct: 624 AGNSKEAFQLHDEMLQRGFAPDD 646
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
E ++ T I+V C K ++ + +R V P + +V+ G+A A+
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212
Query: 352 VVDE------------------------LWKK-----------GNLPSVIACTTLIEGLR 376
+VD +W K G P V + T LI G
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
R+ + EA + ++M GI PD V+F+CL+ G+ A GL PDG+
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y +++ G+ R + + +EM+ G +PD+ TYN+ ++GL R+
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 381
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 185/407 (45%), Gaps = 53/407 (13%)
Query: 120 ASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
ASS R S L S+ SA P P P++ V A L F
Sbjct: 11 ASSIRNSNLSSLFTHSSAIPSPN--------PQIAFFLRHCKTGNVTATH---ALHFFHL 59
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
M + PS+S +N L++G K + + + Y++M + D T NIL++ C
Sbjct: 60 MMRSTP-TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVN 118
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT-- 297
+ F + +G +PN+V++NTLI+G E + E + M +LGC VT
Sbjct: 119 RLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178
Query: 298 --------------------------------CE-------ILVDGLCNEGRVLKACELV 318
C+ I+VDGLC GR +A +L
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G++P Y L+ C G + ++DE+ +G P ++ LI+ L +
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKE 298
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K +EA L+ M++ GI+PD VT+N L+E C VG A L + +KG +PD ++Y
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 358
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++L++GY++ + +E L NEML G P++ TY+S + G+ A K
Sbjct: 359 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 165/335 (49%), Gaps = 7/335 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + +R+++ F M+KL P V Y LI G + AL + M
Sbjct: 142 YNTLIKGLCMEHRISEATRLFLRMQKL-GCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200
Query: 217 VRD------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ D KP+V+T+NI++ G C+ + D A LF EM+ +G P+++S+N+LI GF
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K++E + EM++ G + VT +L+D LC EG+V++A +L+ G++P
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+E C G+ A E+ + KG P VI+ LI G + K EA L +
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
ML G P+ +T++ LL+ + G+ DA +L + G+ + TY I + G + +
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 440
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L E+ F ++ N +DGL A K
Sbjct: 441 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 6/315 (1%)
Query: 177 FEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+E ++L+D +P + +NVLI+ K + +A M+ + PD+VT+N
Sbjct: 266 WEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNS 325
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI GFC + A LF M KGC P+V+S+N LI G+ K +E + + EM+ +G
Sbjct: 326 LIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVG 385
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ +T + L+ G+ G+V A +L G+ + Y ++ LC A+
Sbjct: 386 KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAM 445
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ EL + LI+GL + K A L EK+ EG P+ VT+ ++
Sbjct: 446 KLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGF 505
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G+ A+ L G PD +TY+ L+ G+ N+ +E L++ M + PD
Sbjct: 506 CREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDA 565
Query: 471 ATYNSYMDGLSNARK 485
T + +D LS K
Sbjct: 566 ITCSIVVDMLSKDEK 580
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ K R ++ FE M K PS+ YN LI+GF +++++ D M
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++PD+VTFN+LI C+ K A L M E G P++V++N+LI GF
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M GCE ++ +L++G +V +A +L + G P Y L
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ + G A ++ + G + ++GL + EA L ++
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ NCL++ LC G+ A L S +G +P+ +TY I++ G+ RE + +
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ +M G PD+ TYN+ M G + K
Sbjct: 517 LIQKMEANGCTPDIITYNTLMRGFYESNK 545
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI GF + + A + M +PDV+++N+LI+G+ + K + A+ L
Sbjct: 318 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 377
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM G PNV+++++L++G F K D+ + M G +S T I +DGLC
Sbjct: 378 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 437
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A +L + + + L++ LC G A E+ ++L +G+ P+V+
Sbjct: 438 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 497
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I G R + +A+ L++KM G PD +T+N L+ + + + +L +
Sbjct: 498 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 557
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKE 453
K + PD +T I+V +++ + +E
Sbjct: 558 QKDVSPDAITCSIVVDMLSKDEKYQE 583
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 29/283 (10%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL F+ M+R P + +FN L+SG + K + L+ +MR G + + + N L+
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ EG ++ G + VT L+ GLC E R+ +A L + + G P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L++ LCG GN IAL++ E+ + + R +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEM---------------LNDISRYEINCK----- 212
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
P+ +T+N +++ LC VGR +A +L T+G+ P ++Y+ L+ G+
Sbjct: 213 ---------PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 263
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ +E + L++EMLD+G PD+ T+N +D L K + +
Sbjct: 264 GKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Query: 171 NDGLLAFEAMRKLIDGRPS-----VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
ND L FEAM+ + + S + N LI+G K + + A ++++ + +P+V
Sbjct: 438 NDCL--FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 495
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+ I+I GFCR + D A L ++M GC P+++++NTL+RGF+ K +E V + +
Sbjct: 496 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 555
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS-RRGV 326
M + ++TC I+VD L + + + L+ F ++GV
Sbjct: 556 MAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 597
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 2/241 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + K ++ + + + M L+ RP+V Y+ L+ G + D A + M
Sbjct: 358 YNVLINGYSKTLKVEEAMKLYNEML-LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 416
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + T+ I + G C+N A+ LF E++ + + N LI G K
Sbjct: 417 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 476
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + ++ G E + VT I++ G C EG+V KA L+ G P Y L
Sbjct: 477 ETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 536
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LKEG 395
+ ++++ + +K P I C+ +++ L + K E L+ + +++G
Sbjct: 537 MRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKG 596
Query: 396 I 396
+
Sbjct: 597 V 597
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 171/310 (55%), Gaps = 6/310 (1%)
Query: 175 LAFEAMRKLIDGRPSVSIYNV--LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+AF RK+++ ++ ++ L+ FV+ R+ A G M++ +V +NIL+
Sbjct: 90 VAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILL 149
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G CRN +F A+ L REMR+ P+VVS+NT+IRGF ++ ++ + +A EM GC
Sbjct: 150 KGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCS 209
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL--CGEGNAGIAL 350
+S VT IL+D C G++ +A L+ + +G+ Y L+ CGE + G AL
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKAL 269
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
DE+ ++G+ P I TLI G +L + EAS + E M++ G+ P+ T+ L++ L
Sbjct: 270 --FDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VG+T +A +L L K +P+ +TY+I+++ +++ + +V M PD
Sbjct: 328 CGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387
Query: 471 ATYNSYMDGL 480
TYNS + GL
Sbjct: 388 ITYNSLLGGL 397
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN +I GF + +E +KAL + M +VT+ ILI FC+ K D A+GL
Sbjct: 175 PDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGL 234
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM+ KG +++ + +LIRGF + D G + E++E G ++T L+ G C
Sbjct: 235 LKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A E+ RGV P + Y GL++ LCG G AL++++ + +K P+V+
Sbjct: 295 LGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVT 354
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+I L + +A ++E M K PD++T+N LL LC G +A +L +L
Sbjct: 355 YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLML 414
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ DPD ++++ L+ G + NR + ++ + ++++ D+ T N
Sbjct: 415 KDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 158/357 (44%), Gaps = 40/357 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++AF KA +M++ + + M+ K ++ + +Y LI GF C E D+ +D ++
Sbjct: 219 IDAFCKAGKMDEAMGLLKEMKHKGLE--ADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P +T+N LI GFC+ + A +F M E+G PNV ++ LI G G K E
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M++ E + VT I+++ LC + V A E+V +R P + Y L+
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396
Query: 340 LCGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGL---RRLRKG-------VEASG- 386
LC +G+ A +++ + K + P VI+ LI GL RL + VE G
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA 456
Query: 387 --------LMEKMLKEG----------------ILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ LK G I+P+S T+ +++ C G A L
Sbjct: 457 GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGL 516
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L P Y+ L+S ++ + L EM + PD+ ++N +DG
Sbjct: 517 LCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 149/335 (44%), Gaps = 16/335 (4%)
Query: 151 PEMERIFHFAVNAFVKAN-----RMNDGLLAF----EAMRKL-----IDGRPSVSIYNVL 196
E IF F + V+ N + DGL EA++ L D P+V YN++
Sbjct: 299 KEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNII 358
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
IN K AL + M + R +PD +T+N L+ G C D A L M +
Sbjct: 359 INKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 257 --NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+P+V+SFN LI G + + +++ ++E VT IL++ G V KA
Sbjct: 419 YTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKA 478
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
EL S ++P Y +++ C G +A ++ ++ PSV L+
Sbjct: 479 MELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSS 538
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + +A L E+M ++ PD ++FN +++ G A+ L + S GL PD
Sbjct: 539 LCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD 598
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++ + + E + ++M+D GF PD
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 11/328 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F K R+ + FE M + RP+V Y LI+G + +AL + M
Sbjct: 285 YNTLIRGFCKLGRLKEASEIFEFMMER-GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +P+VVT+NI+I+ C++ AL + M+++ P+ +++N+L+ G +
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403
Query: 277 DEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACE----LVIDFSRRGVLPKD 330
DE + Y M++ + ++ L+ GLC R+ +A + LV ++ +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
L+ G+ A+E+ ++ +P+ TT+I+G + A GL+ K
Sbjct: 464 I----LLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK 519
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + P +NCLL LC G A RL PD ++++I++ G +
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMD 478
K E+L+ M G PDL TY+ ++
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLIN 607
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++ R++ ++A +R+M E N VS + L+ F RK + M++
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G F+ IL+ GLC KA L+ + + ++P Y ++ C
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
AL++ +E+ G S++ LI+ + K EA GL+++M +G+ D + + L+
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
CD G L +G P +TY+ L+ G+ + R KE + M++ G P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315
Query: 469 DLATYNSYMDGLSNARKS 486
++ TY +DGL K+
Sbjct: 316 NVYTYTGLIDGLCGVGKT 333
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 125/274 (45%), Gaps = 2/274 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K NR++ L ++ + + + G + N+L+N +K + +KA+ + ++
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKL-GAGDIVTTNILLNSTLKSGDVNKAMELWKQI 485
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ T+ +I GFC+ ++A GL +MR P+V +N L+ +
Sbjct: 486 SNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTL 545
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM ++ I++DG G + A L++ S G+ P F Y L
Sbjct: 546 DQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ + G A+ D++ G P C ++++ + + + ++K++ + +
Sbjct: 606 INRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDV 665
Query: 397 LPDSVTFNCLLEDLCDVGRTVD-ADRLRLLASTK 429
+ D +++ +C +D A RL +A K
Sbjct: 666 VLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDK 699
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 208/489 (42%), Gaps = 30/489 (6%)
Query: 15 NKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSL 74
+K+ P A + L S ET + + + + + ++T LL+ N +
Sbjct: 20 DKASSPKKALQLRLRSSSETGSNNNKTSSRSNIGQSSKPISRVQTPLLSFINYSTQEQTQ 79
Query: 75 LHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNF 134
+ S D ++A+A + T F AS Y L+
Sbjct: 80 ILLSVSGDSFCANSIIVDILVWAYAKNL------RTRLGFEAFKRASDYGLK-----LSV 128
Query: 135 ISANPCPCS-------NDGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEA 179
S NP D F EM R F+ +N K ++N E
Sbjct: 129 TSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIED 188
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDK---ALGFYDRMVRDRVKPDVVTFNILISGFC 236
M K+ +V YN LI+G+ K + K A M D + P+ VTFNILI GFC
Sbjct: 189 M-KVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
++K A+ +F EM +G PNVV++N+LI G K +E + +M+ + + +
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L++G C V +A EL D ++G+ P Y L++ C + N A + +
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
KG P V LI GL R A L+ +M + + D +T+N L++ LC+ G
Sbjct: 368 LGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEM 427
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
A RL KGL P +TY+ ++ GY +E + NL ++M G + ++ATYN
Sbjct: 428 KKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVL 487
Query: 477 MDGLSNARK 485
+ G K
Sbjct: 488 IKGFCKKDK 496
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 163/328 (49%), Gaps = 24/328 (7%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
DGI CP E F+ ++ F K ++ + F M + +P+V YN LING
Sbjct: 230 DGI--CPN-EVTFNILIDGFCKDKNVSAAMKVFAEMNRQ-GVKPNVVTYNSLINGLCNNG 285
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ ++A D+MV +KP+++T N L++GFC+NK A LF +M ++G PNV ++N
Sbjct: 286 KVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYN 345
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGC--EFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
LI + + ++ + M+ G + S+ C L+ GLC +G + A LV +
Sbjct: 346 ILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC--LIAGLCRKGDLEAARNLVSEMD 403
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ + Y L++ LC +G AL ++DE+ +KG PS + T+I+G +
Sbjct: 404 TKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLR 463
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
A L +M K G L + T+N L++ C + DA+ L KGL P+ MTY I+
Sbjct: 464 AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT 523
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDL 470
EM+++GF+PD+
Sbjct: 524 E----------------EMMEKGFVPDI 535
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 145/286 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +N+LI+GF K + A+ + M R VKP+VVT+N LI+G C N K + A L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M PN+++ N L+ GF + + + +M + G + T IL+D C
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + A L +GV P Y L+ LC +G+ A +V E+ K +I
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ L + +A L+++M ++G+ P +T+N +++ C G A LR
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G + TY++L+ G+ ++++ ++ L+NEML++G IP+ TY
Sbjct: 474 KVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 176/373 (47%), Gaps = 40/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F R+ AF + K++ +P+++ +N LI G +
Sbjct: 97 FGIPPNIYTLNILINSFCHLQRLG---FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+ L +D+M+ + +P+VVT+ LI+G C+ A+ L R M + C P+VV + +
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ + N+ EMI G CE+ VT
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG+V++A ++V +RGV P Y L++ C A+
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + KG P V++ +TLI G ++++ +A L E+M ++ ++P++VT++ L+ L
Sbjct: 334 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 393
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR DA L T+G PD ++Y IL+ + R E L+ + PD+
Sbjct: 394 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 453
Query: 471 ATYNSYMDGLSNA 483
Y +DG+ A
Sbjct: 454 QIYTIVIDGMCRA 466
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 161/318 (50%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + PS++ + L+ K + + L +M + P++ T
Sbjct: 47 NTLDDALSSFNRMLHM-HPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 105
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC ++ A + ++ + G PN+ +FNTLIRG E K E +++ +MI
Sbjct: 106 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 165
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + VT L++GLC G A L+ + P Y +++ LC +
Sbjct: 166 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 225
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ +G PS+ +LI L L + + L+ +M+ I+P+ V F+ ++
Sbjct: 226 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ ++A + + +G++P+ +TY+ L+ G+ + E + + M+ +GF
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 345
Query: 468 PDLATYNSYMDGLSNARK 485
PD+ +Y++ ++G ++
Sbjct: 346 PDVVSYSTLINGYCKIQR 363
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 155/304 (50%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V I++ +++ K + +A D M++ V+P+VVT+N L+ G C + D A+ +
Sbjct: 276 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 335
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KG P+VVS++TLI G+ ++ ++ + + EM ++VT L+ GLC+
Sbjct: 336 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L + RG +P Y L++ LC A+ ++ + P +
Sbjct: 396 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 455
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I+G+ R + A L + +G+ P+ T+ ++ LC G +A +L
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN--ARK 485
KG P+G TY+++ G+ R N G L+ EML GF D++T ++ LS+ +
Sbjct: 516 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQ 575
Query: 486 SVRQ 489
SV+Q
Sbjct: 576 SVKQ 579
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN LI+ E+ + MV ++ P+VV F+ ++ C+ K A +
Sbjct: 241 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 300
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G PNVV++N L+ G + DE V + M+ G V+ L++G C
Sbjct: 301 VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCK 360
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ KA L + R+ ++P Y L+ LC G A+ + E+ +G +P ++
Sbjct: 361 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 420
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + R+ EA L++ + + PD + +++ +C G A L S
Sbjct: 421 YCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLS 480
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+KGL P+ TY I+++G ++ E L EM +G+ P+ TYN G +++
Sbjct: 481 SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 540
Query: 488 R 488
R
Sbjct: 541 R 541
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +R + G +P V +Y +I+ K R+ +A + M+ + P + T+N LI
Sbjct: 192 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C ++ L EM PNVV F+T++ E K E ++ MI+ G E
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+DG C + +A ++ +G P Y L+ C A+ +
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+E+ +K +P+ + +TL+ GL + + +A L +M+ G +PD V++ LL+ LC
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R +A L +DPD Y I++ G R + +L + + +G P++ TY
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 491
Query: 474 NSYMDGL 480
++GL
Sbjct: 492 TIMINGL 498
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 14/324 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
FHFA + V N GL +P+ ++ L+NG + A+ +D M
Sbjct: 28 FHFAFS--VLGNMFKLGL------------QPNHVTFSTLLNGLSSKAKIIDAVKLFDEM 73
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ +PDV+T++ +I+G C+ +A+ L ++M EKGC PNVV ++T+I ++
Sbjct: 74 VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLI 133
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EM+ G + VT ++ G CN GR +A L R V+P + L
Sbjct: 134 TEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNIL 193
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ L EG A V + + +KG P+V L++G + EA L M+++G
Sbjct: 194 VDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGC 253
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P ++N L++ C GR +A L S K L PD +TY L+ G+ ++ R ++ +
Sbjct: 254 APSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQK 313
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM G +PDL TY+ +DGL
Sbjct: 314 LLEEMRSYGLLPDLMTYSIVLDGL 337
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 164/329 (49%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N ++ D + F+ M K+ P V Y+ +ING K A+ +M
Sbjct: 50 FSTLLNGLSSKAKIIDAVKLFDEMVKM-GYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KP+VV ++ +I C++K A+ EM +G +PNVV++++++ GF +
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E ++ +M+E +VT ILVDGL EG +L+A + +GV P Y L
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C + A ++ + + +KG PSV + LI+G + + EA GL+ +M + +
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+VT++ L++ C GR DA +L + GL PD MTY I++ G ++ E
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M + P++ Y + G+ N K
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGK 377
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 148/292 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y+ +++GF ++A + +MV V PD VTFNIL+ G + A +
Sbjct: 150 PNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCV 209
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M EKG PNV ++N L+ G+ + + DE + M+ GC S + IL+ G C
Sbjct: 210 FETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK 269
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A L+ + S + + P Y L++ C +G A ++++E+ G LP ++
Sbjct: 270 SGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMT 329
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ +++GL + EA L++ M + I P+ + L++ +C+ G+ A L
Sbjct: 330 YSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLF 389
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ PD +TY +++SG + E L +M G +P+ TYN + G
Sbjct: 390 VKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F R N+ F+ M + + P +N+L++G K +A ++ M+
Sbjct: 159 LHGFCNLGRSNEATSLFKQMVER-NVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKG 217
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+P+V T+N L+ G+C + D A LF M KGC P+V S+N LI+G + DE
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM +VT L+ G C +GR A +L+ + G+LP Y +++ L
Sbjct: 278 GLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +G+ A E++ + + P++ T LI+G+ K A L + +GI PD
Sbjct: 338 CKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDV 397
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ ++ L G + +A L + G P+ TY++++ G+ R L+ E
Sbjct: 398 VTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457
Query: 461 MLDEGFIPDLATYNSYMD 478
M+ GF D +T+ D
Sbjct: 458 MVGRGFSADSSTFQMLSD 475
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 141/261 (54%), Gaps = 2/261 (0%)
Query: 221 VKPDVVTFNILISGFCRNK--KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++PDV T ILI+ FC + F A + M + G PN V+F+TL+ G + K +
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V + EM+++G E +T +++GLC G A +L+ +G P Y +++
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC + A+E + E+ +G P+V+ ++++ G L + EA+ L ++M++ ++P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D+VTFN L++ L G ++A + KG++P+ TY+ L+ GY +++ E + L
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
N M+ +G P + +YN + G
Sbjct: 246 NIMVRKGCAPSVRSYNILIKG 266
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 2/314 (0%)
Query: 169 RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+M +A + ++K+ + +P+V +Y+ +I+ K + +A+ F MV + P+VV
Sbjct: 94 KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ ++ GFC + + A LF++M E+ P+ V+FN L+ G E E + M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
IE G E + T L+DG C++ ++ +A +L R+G P Y L++ C G
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ E+ K P + +TL++G + + +A L+E+M G+LPD +T++ +
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L+ LC G +A L ++P+ Y IL+ G + + L + + +G
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393
Query: 467 IPDLATYNSYMDGL 480
PD+ TY + GL
Sbjct: 394 QPDVVTYTVMISGL 407
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A V+ ++K G P+ + +TL+ GL K ++A L ++M+K G PD +T++ ++
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC +G T A +L KG P+ + Y ++ ++ E ++EM++ G P
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150
Query: 469 DLATYNSYMDGLSNARKSVRQT 490
++ TY+S + G N +S T
Sbjct: 151 NVVTYSSILHGFCNLGRSNEAT 172
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 171/363 (47%), Gaps = 34/363 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR----------------------------KLIDG-- 186
++ +N F K NR++D + MR K++D
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+P+V Y +LI + D+AL D M+ +KPD+ T+N +I G C+ D
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A + R + KGC P+V+S+N L+R + K++EG + +M C+ + VT IL+
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
LC +G++ +A L+ +G+ P + Y L+ C EG +A+E ++ + G L
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P ++ T++ L + K +A + K+ + G P+S ++N + L G + A +
Sbjct: 397 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 456
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
L + G+DPD +TY+ ++S RE + L+ +M F P + TYN + G
Sbjct: 457 ILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCK 516
Query: 483 ARK 485
A +
Sbjct: 517 AHR 519
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 164/340 (48%), Gaps = 8/340 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREF 206
F +M +IFH + ++ + L E M RK + P V + LI GF R
Sbjct: 83 FRDTQMLKIFHRSC----RSGNYIESLHLLETMVRKGYN--PDVILCTKLIKGFFTLRNV 136
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ + ++ +PDV +N LI+GFC+ + D A + MR K +P+ V++N +
Sbjct: 137 PKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 195
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I K D + + +++ C+ + +T IL++ EG V +A +L+ + RG+
Sbjct: 196 IGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGL 255
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F Y ++ +C EG A E++ L KG P VI+ L+ L K E
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
LM KM E P+ VT++ L+ LC G+ +A L L KGL PD +Y L++ +
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE R + M+ +G +PD+ YN+ + L K+
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + YN +I G K D+A + +PDV+++NIL+ K++
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M + C+PNVV+++ LI + K +E +N+ M E G + + + L+ C
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EGR+ A E + G LP +Y ++ LC G A ALE+ +L + G P+
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ T+ L + A ++ +M+ GI PD +T+N ++ LC G A L +
Sbjct: 436 SYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ P +TY+I++ G+ + +R ++ ++++ M+ G P+ TY ++G+ A
Sbjct: 496 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFA 552
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 116/235 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y++LI + + ++A+ M + PD +++ LI+ FCR + D+A+
Sbjct: 327 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 386
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC P++V++NT++ K D+ + + ++ E+GC +S + + L +
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G ++A ++++ G+ P + Y ++ LC EG A E++ ++ PSV+
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
++ G + + +A +++ M+ G P+ T+ L+E + G +A L
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 561
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A R+ D L F+ M L G PSV Y++L++ K + +A+ D
Sbjct: 165 FNPLIRALCVRGRVPDALAVFDDM--LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDE 222
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +PD+VT+N+LI+ C D AL + ++ GC P+ V++ +++ G +
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ E + EM C VT +V LC +G V +A ++V S G +P Y
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC G A+E++ L G P IA TT+++GL + + A LM +M+
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VTFN ++ LC G A ++ S G +PD +TY+ ++ G E +
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++ + G PD+ T+N+ + GL + +
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDR 492
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 10/331 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP---SVSIYNVLINGFVKCREFDKALGFY 213
++ VN + +A R+ D R+LI G P +N LI AL +
Sbjct: 133 YNTMVNGYCRAGRIEDA-------RRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVF 185
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ P VVT++IL+ C+ + A+ L EMR KGC P++V++N LI E
Sbjct: 186 DDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE +N+ ++ GC+ +VT ++ LC R + EL + + P + +
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+V LC +G A++VVD + + G +P ++ +++++GL + + +A L+ ++
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD++ + +L+ LC + + A+ L PD +T++ +++ ++
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+V +M + G PD+ TYNS +DGL N R
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 30/400 (7%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS------CPE--MERIF 157
+ D T+ +++SL S R+ E+ + +++N C ++ F+ C + ++R
Sbjct: 264 KPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA-PDEVTFNTIVTSLCQQGLVDRAI 322
Query: 158 --------HFAVNAFVKANRMNDGLL-------AFEAMRKL--IDGRPSVSIYNVLINGF 200
H + V + + DGL A E + +L +P Y ++ G
Sbjct: 323 KVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
+++ A MV PD VTFN +I+ C+ D A+ + +M E GCNP++
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDI 442
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++N++I G ER D+ + + + GC+ VT L+ GLC+ R A +L+++
Sbjct: 443 VTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVN 502
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
P + ++ LC +G A+E + + + G +P+ +++ L + K
Sbjct: 503 MMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGK 562
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYH 439
EA L+ M PD +T+N ++ ++ G+ +A D LR++ S GL PD +TY
Sbjct: 563 TQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVS-NGLSPDTITYR 619
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L G RE+ ++ + D G PD YN + G
Sbjct: 620 SLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLG 659
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 159/365 (43%), Gaps = 36/365 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++A KA+ ++ + MR P + YNVLIN + D+AL +
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAK-GCEPDIVTYNVLINAMCNEGDVDEALNILSDL 258
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPD VT+ ++ C ++++ LF EM C P+ V+FNT++ +
Sbjct: 259 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLV 318
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + M E GC VT ++DGLC+ GRV A EL+ G P Y +
Sbjct: 319 DRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTV 378
Query: 337 -----------------------------------VEKLCGEGNAGIALEVVDELWKKGN 361
+ LC +G A++VV+++ + G
Sbjct: 379 LKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGC 438
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P ++ ++I+GL R +A L+ + G PD VTFN LL+ LC V R DA++
Sbjct: 439 NPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQ 498
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L + PD T++ +++ ++ + + M + G IP+ +TYN +D L
Sbjct: 499 LMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALL 558
Query: 482 NARKS 486
A K+
Sbjct: 559 KAGKT 563
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 143/298 (47%), Gaps = 2/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +N ++ + D+A+ D M PD+VT++ ++ G C + D A+ L
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ GC P+ +++ T+++G +++ + EM+ C VT ++ LC
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V +A ++V S G P Y +++ LC E A+E++ L G P ++
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++GL + + +A LM M+ PD+ TFN ++ LC G + A + +
Sbjct: 480 FNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMA 539
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G P+ TY+I+V + + +E L++ M + PDL TYN+ + ++ A K
Sbjct: 540 ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGK 595
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E M +++ D P +N +I + D+A+ ++M + PD+VT+N +I
Sbjct: 391 AEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIID 450
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C + D A+ L ++ GC P++V+FNTL++G ++++ + M+ C
Sbjct: 451 GLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP 510
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T ++ LC +G +L+A E + + G +P Y +V+ L G AL+++
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ P +I T+I + + K EA L+ M+ G+ PD++T+ L +C
Sbjct: 571 SGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICRE 628
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
T A R+ GL PD Y+ ++ G+ + R + M+ G +PD +TY
Sbjct: 629 DGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688
Query: 474 NSYMDGLS 481
++ L+
Sbjct: 689 IILLEALA 696
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TTF ++ SL + L ++ N C + ++ V+A +KA
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAEN----------GCIPNQSTYNIVVDALLKA 560
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + L M +G P + YN +I+ K + ++AL MV + + PD +T
Sbjct: 561 GKTQEALKLLSGM---TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTIT 617
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ L G CR D A+ + +++ G +P+ +N ++ GF + D ++ M+
Sbjct: 618 YRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMV 677
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
GC T IL++ L E + +A +L+++ GVL K
Sbjct: 678 SSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSL 721
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
Query: 237 RNKKFDLALGLFREMREKG----CNP-NVVSFNTLIRGFF-GERKFDEGVNMAYEMIELG 290
+ ++ D AL L + G C P VV N LI+ G R D A LG
Sbjct: 70 QREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFA----TLG 125
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT +V+G C GR+ A L+ S P F + L+ LC G AL
Sbjct: 126 ASATVVTYNTMVNGYCRAGRIEDARRLI---SGMPFPPDTFTFNPLIRALCVRGRVPDAL 182
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
V D++ +G PSV+ + L++ + +A L+++M +G PD VT+N L+ +
Sbjct: 183 AVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAM 242
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C+ G +A + + G PD +TY ++ R KE E L EM PD
Sbjct: 243 CNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDE 302
Query: 471 ATYNSYMDGL 480
T+N+ + L
Sbjct: 303 VTFNTIVTSL 312
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 19/241 (7%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVL-NFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+ D TF +++ L S R+ + ++ N + ++ CP F+ + +
Sbjct: 474 KPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD-----------CPPDATTFNTVITSL 522
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+ + L A E ++ + + P+ S YN++++ +K + +AL M
Sbjct: 523 CQKGLL---LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--T 577
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PD++T+N +IS + K + AL L R M G +P+ +++ +L G E D + M
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ ++G + ++ G C R A + G +P + Y L+E L
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAY 697
Query: 343 E 343
E
Sbjct: 698 E 698
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ + +L F + + D P Y LI G + R+ DKA +DRM
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQF-DLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+D P+ VT++ LI+G C + A+ + EM EKG P V ++ I +
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ +N+ M + GC S T ++ GL G++ A + + G++P Y L
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +LC EG GIAL++ D + G L + +I+GL + +A + KMLK+G
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P VT+N L+ + G +A R + +PD TY L+SG+ + + +
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS 498
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
EML G P+ TY + +DG
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDG 521
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 39/473 (8%)
Query: 4 LKKKLPPILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLT 63
LKKK P + S P S P P P + + L T H
Sbjct: 13 LKKKNPLHFLVFSSVPT----SYPFPKTTPFPNLVFKVLDLISTDPHWPK---------N 59
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSY 123
P N++ + H + ++ H T F W S ++HD F+ ++ L
Sbjct: 60 PELNRLASTLRPHHVSKIINTHIN-TDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDK 118
Query: 124 RFSEL-HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
+ H + I A C N+ E++R+ F + + GL F
Sbjct: 119 ILAPADHVRILMIKA----CRNE-----DELKRVTDF----LHGISSSDSGLFGF----- 160
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
++ +N L+ K A Y ++ VKP ++TFN +I+ C+ K
Sbjct: 161 ------TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQ 214
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ +F ++ + P+ ++ +LI G RK D+ + M++ GC +SVT L+
Sbjct: 215 EAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLI 274
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLCNEGR+ +A +++ + + +G+ P + Y + LC G A+ +V + KKG
Sbjct: 275 NGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCS 334
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
PSV T +I GL R K A G+ KMLKEG++P++VT+N L+ +LC GR A ++
Sbjct: 335 PSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKI 394
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G + TY+ ++ G + ++ + N+ML +G P + TYN+
Sbjct: 395 FDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNT 447
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 158/387 (40%), Gaps = 75/387 (19%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ R++D + +M K PSV Y +I+G + + + A+G Y +M+++
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKK-GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+ VT+N LI+ C +F +AL +F M G N ++N +I+G FG ++ +
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427
Query: 281 -----------------------------------NMAYEMIELGCEFSSVTCEILVDGL 305
Y M E CE T L+ G
Sbjct: 428 VVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G++ A + + G+ P + Y +++ C EG +AL + + + + G S+
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASI 547
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF---------------------- 403
+I GL + + EA KM ++G+ P+++T+
Sbjct: 548 ETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607
Query: 404 ----NCL---------LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
NCL + LC G+ A+RL + G +P TY LVSG RE R
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGR 663
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYM 477
E LV M ++G P + Y S +
Sbjct: 664 SNEASQLVENMKEKGLSPSMEIYCSLL 690
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 7/333 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ + + + ++ F M K DG P+V YN LI +K + A F
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLK--DGPSPTVVTYNTLIVENLKRGYLNNATRFL 465
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M +PD T+ LISGFC+ K D A F EM + G +PN ++ +I G+ E
Sbjct: 466 YMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKE 525
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K D +++ M E GC S T ++ GL R +A + + +G+ P Y
Sbjct: 526 GKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITY 585
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC +A ++ E+ KK LP+ T+LI GL + K V+A+ E++ +
Sbjct: 586 TSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK-VDAA---ERLTE 641
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P T++ L+ LC GR+ +A +L KGL P Y L+ + + +
Sbjct: 642 NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDC 701
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ N M +GF P L Y + L ++
Sbjct: 702 ALEIFNLMAVKGFQPHLFIYKVLICALCGVSRA 734
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 7/283 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ + K +++ L FE M + +G S+ YN +I+G K F +A F +M
Sbjct: 519 IDGYCKEGKIDVALSLFERMEE--NGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++P+ +T+ LI+G C+N +LA +F EM +K C PN ++ +LI G E K D
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDA- 635
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
A + E GCE + T LV GLC EGR +A +LV + +G+ P Y L+
Sbjct: 636 ---AERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C ALE+ + + KG P + LI L + + EA + + +LK+ D
Sbjct: 693 HCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSD 752
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+ + L++ L G + + L ++ P TY IL
Sbjct: 753 LIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILA 795
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 4/271 (1%)
Query: 214 DRMVRDRVKPDVVTFNILISGFCRN----KKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+R+V+D++ IL+ CRN K+ L + SFNTL+
Sbjct: 112 NRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQ 171
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
N+ ++ G + S +T +++ LC +G+V +A + + + P
Sbjct: 172 LGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPD 231
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F Y L+ C A EV D + K G P+ + +TLI GL + EA ++E
Sbjct: 232 AFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLE 291
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M ++GI P T+ + LCD+GR DA L KG P TY ++SG R
Sbjct: 292 EMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAG 351
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + + ++ML EG +P+ TYN+ ++ L
Sbjct: 352 KMELAIGMYHKMLKEGLVPNTVTYNALINEL 382
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
GV P + ++ LC +G A+ V +++++ P T+LI G R RK +A
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA 251
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ ++M+K+G P+SVT++ L+ LC+ GR +A + + KG++P TY + +S
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R + NLV M +G P + TY + + GL A K
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 154/293 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN +I+G+ + A D M ++PD T+ LISG C+ + + A G
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M E G PN V++NTLI G+ + + + EM++ G S T +LV L
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 324
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EGR+ +A +++ + ++G++P Y L+ GNA A ++ +E+ KG P+ +
Sbjct: 325 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI L R + EA L EK+L +G+ PD + FN +++ C G A L
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K + PD +T++ L+ G RE + +E L++EM G PD +YN+ + G
Sbjct: 445 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISG 497
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 160/326 (49%), Gaps = 9/326 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R+ + F+ M + I P+ YN LI+G+ + ++A + D MV+
Sbjct: 250 ISGMCKEGRLEEASGLFDKMVE-IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF----GERKF 276
+ P V T+N+L+ + A + +EMR+KG P+ +++N LI G+ +R F
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + EM+ G E + VT L+ L R+ +A +L +GV P + +
Sbjct: 369 D----LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN A ++ E+ +K P + TL++G R K EA L+++M GI
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +++N L+ G DA +R + G +P +TY+ L+ + E
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 544
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ EM+++G PD +TY S ++G+ N
Sbjct: 545 LLKEMVNKGISPDDSTYLSLIEGMGN 570
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 241 FDLALGLFREMRE-------KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FDL G ++ RE G PNVVS+NT+I G+ + + M G E
Sbjct: 182 FDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEP 241
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S T L+ G+C EGR+ +A L G++P Y L++ C +G+ A
Sbjct: 242 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 301
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
DE+ KKG +PSV L+ L + EA ++++M K+GI+PD++T+N L+
Sbjct: 302 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRC 361
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L +KG++P +TY L+ +R NR KE ++L ++LD+G PD+ +
Sbjct: 362 GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMF 421
Query: 474 NSYMDG 479
N+ +DG
Sbjct: 422 NAMIDG 427
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V+A RM + + MRK +I P YN+LING+ +C +A ++
Sbjct: 316 YNLLVHALFMEGRMGEADDMIKEMRKKGII---PDAITYNILINGYSRCGNAKRAFDLHN 372
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++P VT+ LI R + A LF ++ ++G +P+V+ FN +I G
Sbjct: 373 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANG 432
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM VT L+ G C EG+V +A L+ + RG+ P Y
Sbjct: 433 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYN 492
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ G+ A V DE+ G P+++ LI+ L + ++G A L+++M+ +
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Query: 395 GILPDSVTFNCLLEDLCDVGRTVD 418
GI PD T+ L+E + +V V+
Sbjct: 553 GISPDDSTYLSLIEGMGNVDTLVE 576
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
SV I+ D L EG++ KA E + G P Y ++ GN A ++D
Sbjct: 175 SVKSSIVFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 232
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ KG P +LI G+ + + EASGL +KM++ G++P++VT+N L++ C+ G
Sbjct: 233 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 292
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A R KG+ P TY++LV E R E ++++ EM +G IPD TYN
Sbjct: 293 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 352
Query: 475 SYMDGLS---NARKS 486
++G S NA+++
Sbjct: 353 ILINGYSRCGNAKRA 367
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 177/365 (48%), Gaps = 10/365 (2%)
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS--VSI 192
IS P + D + + P+ ++ +F + + K+ + AF LID +P+ +S
Sbjct: 37 ISPGPISLTKDTVSNAPDRGQLENF-LKSNCKSGHIKRSE-AFSVFNHLIDMQPTPPISS 94
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N L+ K + + + Y RM + PD +T NILI+ +C K D L + EM
Sbjct: 95 FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G +PN V+F +L++G + E + +M+ +G + VT L++GLC G +
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214
Query: 313 KACELVIDFSRRG------VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
A +L + + P Y +++ LC +G E+ E+ +G P V+
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A +++I G+ + A GL +M+ EG+ P+ VTFN L++ LC G+ +A+ L L
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+G PD TY+ L+ G+ E R + +L M +G D +YN ++G + +
Sbjct: 335 IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394
Query: 487 VRQTR 491
V +
Sbjct: 395 VEAKK 399
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 8/314 (2%)
Query: 180 MRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR------VKPDVVTFNIL 231
+RK++ RP+V Y L+NG A+ ++ M+ +KP++V + +
Sbjct: 185 LRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTI 244
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I C++ D LF EM+ +G +P+VV+++++I G +++ + EM++ G
Sbjct: 245 IDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGV 304
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT +L+D LC G++ +A L+ +RG P F Y L++ C EG A +
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ + KG ++ LI G + + VEA L +M+ + I+P +T+N LL L
Sbjct: 365 LFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLF 424
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G+ DA L L P+ TY+IL+ G + N E L + + + F P +
Sbjct: 425 REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQ 484
Query: 472 TYNSYMDGLSNARK 485
+N +DGL ARK
Sbjct: 485 IFNCLIDGLCKARK 498
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 147/292 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ +I+G ++ A G ++ MV + V P+VVTFN+LI C+ K + A L
Sbjct: 271 PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL 330
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M ++G +P+ ++NTLI GF E + D+ ++ M G E +V+ +L++G C
Sbjct: 331 LKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCK 390
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+++A +L + + ++P Y L+ L EG A + E+ P
Sbjct: 391 SGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCT 450
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++GL + EA L + P FNCL++ LC + A L S
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLS 510
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+GL+P+ +TY +++ G + + + ++L M ++G P+L T+N+ M G
Sbjct: 511 HEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG 562
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 148/318 (46%), Gaps = 8/318 (2%)
Query: 174 LLAFEAMRKLIDG--------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+LA + ++++G +P++ Y +I+ K DK + M + PDV
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
V ++ +I G C +++ A GLF EM ++G +PNVV+FN LI K +E ++
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
MI+ G + T L+DG C EGR+ A +L + +G+ Y L+ C G
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGR 393
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A ++ E+ K +P+VI TL+ GL R K +A L +M + P+S T+N
Sbjct: 394 MVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNI 453
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LL+ LC +A L P ++ L+ G + + + L N + EG
Sbjct: 454 LLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513
Query: 466 FIPDLATYNSYMDGLSNA 483
P++ TY + GL +
Sbjct: 514 LEPNVITYTVMIHGLCKS 531
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +NVLI+ K + ++A M++ PD T+N LI GFC + D A L
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KG + VS+N LI G+ + E + EM+ + +T L+ GL
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG+V A L + + P+ Y L++ LC + A+E+ L PS+
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQI 485
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+GL + RK A L ++ EG+ P+ +T+ ++ LC G+ +A L L
Sbjct: 486 FNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGME 545
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG P+ +T++ L+ G+ + + ++ L+ EM ++ F PD +T + +D LS K
Sbjct: 546 EKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K N +++ + F + D +PS+ I+N LI+G K R+ + A ++R+
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENH-DFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++P+V+T+ ++I G C++ + + A LF M EKGC PN+V+FNTL+RGF +
Sbjct: 510 SHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEM 569
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ V + EM E + T I+VD L + + + L+ F +G + ++
Sbjct: 570 QKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTGRGYE 625
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N + K+ RM + L E M K I P+V YN L+ G + + A +
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEI--MPTVITYNTLLTGLFREGKVRDAWNLFGE 438
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+ T+NIL+ G C+N A+ LF + P++ FN LI G RK
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + + G E + +T +++ GLC G++ A +L + +G P +
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
L+ C +E++ E+ +K P + +++ L + K
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 184/382 (48%), Gaps = 28/382 (7%)
Query: 120 ASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
ASS R S L S+ SA P P P++ V A L F
Sbjct: 11 ASSIRNSNLSSLFTHSSAIPSPN--------PQIAFFLRHCKTGNVTATH---ALHFFHL 59
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
M + PS+S +N L++G K + + + Y++M + D T NIL++ C
Sbjct: 60 MMRSTP-TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVN 118
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ F + +G +PN+V++NTLI+G E + E + M +LGC VT
Sbjct: 119 RLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178
Query: 300 ILVDGLCNEGRVLKAC----ELVIDFSRRGV--LPKDFDYFGLVEKLCGEGNAGIALEVV 353
L+ GLC G + A E++ D SR + P Y +V+ LC G A ++
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238
Query: 354 DELWKKGNLPS----------VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
+E+ +G +P+ ++ LI+ L + K +EA L+ M++ GI+PD VT+
Sbjct: 239 EEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 298
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+E C VG A L + +KG +PD ++Y++L++GY++ + +E L NEML
Sbjct: 299 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 358
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
G P++ TY+S + G+ A K
Sbjct: 359 VGKRPNVITYDSLLKGIFLAGK 380
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 158/338 (46%), Gaps = 9/338 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-------KLIDG--RPSVSIYNVLINGFVKCREFD 207
++ V+ K R ++ FE M+ +++D +P + +NVLI+ K +
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVI 277
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A M+ + PD+VT+N LI GFC + A LF M KGC P+V+S+N LI
Sbjct: 278 EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G+ K +E + + EM+ +G + +T + L+ G+ G+V A +L G+
Sbjct: 338 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIA 397
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
+ Y ++ LC A+++ EL + LI+GL + K A L
Sbjct: 398 ENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 457
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
EK+ EG P+ VT+ ++ C G+ A+ L G PD +TY+ L+ G+
Sbjct: 458 FEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 517
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
N+ +E L++ M + PD T + +D LS K
Sbjct: 518 SNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 555
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 136/266 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI GF + + A + M +PDV+++N+LI+G+ + K + A+ L
Sbjct: 293 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 352
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM G PNV+++++L++G F K D+ + M G +S T I +DGLC
Sbjct: 353 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 412
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A +L + + + L++ LC G A E+ ++L +G+ P+V+
Sbjct: 413 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 472
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I G R + +A+ L++KM G PD +T+N L+ + + + +L +
Sbjct: 473 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 532
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKE 453
K + PD +T I+V +++ + +E
Sbjct: 533 QKDVSPDAITCSIVVDMLSKDEKYQE 558
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 10/315 (3%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM----------VRDRVKPDVVTFNI 230
R I+ +P+V YN++++G K D+A ++ M + ++PD+VTFN+
Sbjct: 206 RYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNV 265
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI C+ K A L M E G P++V++N+LI GF + + M G
Sbjct: 266 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 325
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
CE ++ +L++G +V +A +L + G P Y L++ + G A
Sbjct: 326 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 385
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ + G + ++GL + EA L ++ + NCL++ L
Sbjct: 386 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 445
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G+ A L S +G +P+ +TY I++ G+ RE + + L+ +M G PD+
Sbjct: 446 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 505
Query: 471 ATYNSYMDGLSNARK 485
TYN+ M G + K
Sbjct: 506 ITYNTLMRGFYESNK 520
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Query: 171 NDGLLAFEAMRKLIDGRPS-----VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
ND L FEAM+ + + S + N LI+G K + + A ++++ + +P+V
Sbjct: 413 NDCL--FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 470
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+ I+I GFCR + D A L ++M GC P+++++NTL+RGF+ K +E V + +
Sbjct: 471 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 530
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS-RRGV 326
M + ++TC I+VD L + + + L+ F ++GV
Sbjct: 531 MAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 106/254 (41%), Gaps = 31/254 (12%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
AL F M P++ SFN L+ G + + + ++ +M G T IL++
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LCN R+ + RRG P Y L++ LC E A + + K G P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKE------GILPDSVTFNCLLEDLCDVGRTV 417
V+ TLI+GL A L ++ML + P+ +T+N +++ LC VGR
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L T+G+ P NEMLD+G PD+ T+N +
Sbjct: 233 EAKQLFEEMKTQGMIP-------------------------NEMLDQGLQPDMVTFNVLI 267
Query: 478 DGLSNARKSVRQTR 491
D L K + +
Sbjct: 268 DTLCKEGKVIEAKK 281
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 2/241 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + K ++ + + + M L+ RP+V Y+ L+ G + D A + M
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEML-LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 391
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + T+ I + G C+N A+ LF E++ + + N LI G K
Sbjct: 392 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 451
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + ++ G E + VT I++ G C EG+V KA L+ G P Y L
Sbjct: 452 ETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 511
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LKEG 395
+ ++++ + +K P I C+ +++ L + K E L+ + +++G
Sbjct: 512 MRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKG 571
Query: 396 I 396
+
Sbjct: 572 V 572
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 149/287 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V Y +LI+ F K ++A D M + + V +N LIS C+++K AL
Sbjct: 46 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 105
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M KGC P++ +FN+LI G KF+E + + +M+ G +++T L+
Sbjct: 106 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 165
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +LV D RG D Y GL++ LC GN L + +++ KG P+ I
Sbjct: 166 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 225
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+C LI GL R A + M+ G+ PD VT+N L+ LC GR +A L
Sbjct: 226 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 285
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+G+ PD +TY+ L+S + +E + L++ +D GFIP+ T+
Sbjct: 286 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 332
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 132/260 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+ K + AL + M KPD+ TFN LI G C+ KF+ ALGL+++M
Sbjct: 87 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 146
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G N +++NTLI F E + + +M+ GC +T L+ LC G +
Sbjct: 147 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 206
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
K L D +G+ P + L+ LC GN ALE + ++ +G P ++ +LI
Sbjct: 207 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 266
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL + + EA L +K+ EGI PD++T+N L+ C G DA L G
Sbjct: 267 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFI 326
Query: 433 PDGMTYHILVSGYTRENRRK 452
P+ +T++ILVS + +E ++
Sbjct: 327 PNEVTWYILVSNFIKEGDQE 346
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ M+ PD+ T+N LI G C+ A L EM+ KGC PNV+++ LI F
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + +E N+ EM G ++V L+ LC + +V A + D S +G P F
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L+ LC AL + ++ +G + + I TLI R EA L+ M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L G D +T+N L++ LC G L +KGL+P+ ++ +IL++G R
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + +M+ G PD+ TYNS ++GL ++
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRA 275
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 176/373 (47%), Gaps = 40/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F R+ AF + K++ +P+++ +N LI G +
Sbjct: 88 FGIPPNIYTLNILINSFCHLQRLG---FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+ L +D+M+ + +P+VVT+ LI+G C+ A+ L R M + C P+VV + +
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ + N+ EMI G CE+ VT
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG+V++A ++V +RGV P Y L++ C A+
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + KG P V++ +TLI G ++++ +A L E+M ++ ++P++VT++ L+ L
Sbjct: 325 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGL 384
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR DA L T+G PD ++Y IL+ + R E L+ + PD+
Sbjct: 385 CHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDI 444
Query: 471 ATYNSYMDGLSNA 483
Y +DG+ A
Sbjct: 445 QIYTIVIDGMCRA 457
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 161/318 (50%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + PS++ + L+ K + + L +M + P++ T
Sbjct: 38 NTLDDALSSFNRMLHM-HPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYT 96
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC ++ A + ++ + G PN+ +FNTLIRG E K E +++ +MI
Sbjct: 97 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 156
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + VT L++GLC G A L+ + P Y +++ LC +
Sbjct: 157 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 216
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ +G PS+ +LI L L + + L+ +M+ I+P+ V F+ ++
Sbjct: 217 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ ++A + + +G++P+ +TY+ L+ G+ + E + + M+ +GF
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 336
Query: 468 PDLATYNSYMDGLSNARK 485
PD+ +Y++ ++G ++
Sbjct: 337 PDVVSYSTLINGYCKIQR 354
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 155/304 (50%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V I++ +++ K + +A D M++ V+P+VVT+N L+ G C + D A+ +
Sbjct: 267 PNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV 326
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KG P+VVS++TLI G+ ++ ++ + + EM ++VT L+ GLC+
Sbjct: 327 FDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L + RG +P Y L++ LC A+ ++ + P +
Sbjct: 387 VGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 446
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I+G+ R + A L + +G+ P+ T+ ++ LC G +A +L
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN--ARK 485
KG P+G TY+++ G+ R N G L+ EML GF D++T ++ LS+ +
Sbjct: 507 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQ 566
Query: 486 SVRQ 489
SV+Q
Sbjct: 567 SVKQ 570
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN LI+ E+ + MV ++ P+VV F+ ++ C+ K A +
Sbjct: 232 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 291
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G PNVV++N L+ G + DE V + M+ G V+ L++G C
Sbjct: 292 VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCK 351
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ KA L + R+ ++P Y L+ LC G A+ + E+ +G +P ++
Sbjct: 352 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 411
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + R+ EA L++ + + PD + +++ +C G A L S
Sbjct: 412 YCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLS 471
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+KGL P+ TY I+++G ++ E L EM +G+ P+ TYN G +++
Sbjct: 472 SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 531
Query: 488 R 488
R
Sbjct: 532 R 532
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 2/307 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +R + G +P V +Y +I+ K R+ +A + M+ + P + T+N LI
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C ++ L EM PNVV F+T++ E K E ++ MI+ G E
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+DG C + +A ++ +G P Y L+ C A+ +
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+E+ +K +P+ + +TL+ GL + + +A L +M+ G +PD V++ LL+ LC
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R +A L +DPD Y I++ G R + +L + + +G P++ TY
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 482
Query: 474 NSYMDGL 480
++GL
Sbjct: 483 TIMINGL 489
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 6/295 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY +LI GF + +AL D M+ DVVT+N +++G C+ K A L
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P+ +F TLI G+ + ++ V + MI+ + VT L+DG C
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ K EL D R + P Y L+ C G A + DE+ +KG ++I
Sbjct: 390 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C T+++G R V+A + ML +GI+PD +T+N L+ + + DR L +
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI---KEENMDRAFALVN 506
Query: 428 ---TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD +TY+++++G++R+ R +E E ++ +M++ G PD +TY S ++G
Sbjct: 507 KMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 171/367 (46%), Gaps = 38/367 (10%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFD 207
+C +F V +V+A ++ +G AF ++ G S++ N L+ G VK D
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKS--KGLCVSINACNSLLGGLVKVGWVD 79
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A Y +VR V+ +V T NI+I+ C+N+K + +M EKG P+VV++NTLI
Sbjct: 80 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ + +E + M G + T +++GLC G+ L+A ++ + + G+
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---------- 377
P Y L+ + C N A + DE+ +G +P +++ + LI L +
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259
Query: 378 -----------------------LRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
R GV EA + ++ML++G + D VT+N +L LC
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+AD L + +G+ PD T+ L++GY+++ + L M+ PD+ T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Query: 473 YNSYMDG 479
YN+ +DG
Sbjct: 380 YNTLIDG 386
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LING+ K +KA+ ++ M++ +KPDVVT+N LI GFC+ + + L
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M + PN +S+ LI G+ E + EM+E G E + +TC +V G C
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +KA E + + +G++P Y L+ E N A +V+++ G LP VI
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ G R + EA +M KM++ G+ PD
Sbjct: 520 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS-------------------------- 553
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++G+ +N KE + +EML GF+PD
Sbjct: 554 ---------TYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 159/334 (47%), Gaps = 5/334 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +NA+ + + + AFE M + +P V YN +ING K ++ +A G D
Sbjct: 135 YNTLINAYCRQGLLEE---AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 191
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ + PD T+NIL+ CRN A +F EM +G P++VSF+ LI
Sbjct: 192 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 251
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G +V IL+ G C G + +A ++ + +G + Y
Sbjct: 252 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC E A E+ E+ ++G P TTLI G + +A L E M++
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD VT+N L++ C + L ++ + P+ ++Y IL++GY E
Sbjct: 372 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 431
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L +EM+++GF + T N+ + G A +V+
Sbjct: 432 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 465
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 152/345 (44%), Gaps = 37/345 (10%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA+E ++++ V++Y N++IN K ++ + F M V PDVVT+N LI
Sbjct: 80 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+ +CR + A L M KG P V ++N +I G K+ + EM+++G
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG-------- 344
+ T IL+ C ++ A + + +GV+P + L+ L G
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259
Query: 345 -----NAGIA----------------------LEVVDELWKKGNLPSVIACTTLIEGLRR 377
NAG+A L+V DE+ ++G + V+ T++ GL +
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA L +M + G+ PD TF L+ G A L + + L PD +T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
Y+ L+ G+ + + ++ L N+M+ P+ +Y ++G N
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCN 424
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 145 DGIFSCPEMERI---FHFAVNAFVKANRMNDGLL------------AFEAMRKLIDGRPS 189
DG EME++ ++ ++ + N ++ G+L AF ++++
Sbjct: 385 DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFE 444
Query: 190 VSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+I N ++ G+ + KA F M+ + PD +T+N LI+GF + + D A L
Sbjct: 445 ATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFAL 504
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G P+V+++N ++ GF + + E + +MIE G T L++G
Sbjct: 505 VNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVT 564
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
+ + +A + + +RG +P D
Sbjct: 565 QNNLKEAFRVHDEMLQRGFVPDD 587
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%)
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
L KG S+ AC +L+ GL ++ A + +++++ G+ + T N ++ LC +
Sbjct: 53 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 112
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ KG+ PD +TY+ L++ Y R+ +E L++ M +G P + TYN+
Sbjct: 113 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 172
Query: 476 YMDGLSNARKSVR 488
++GL K +R
Sbjct: 173 IINGLCKTGKYLR 185
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 166/327 (50%), Gaps = 3/327 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N + K R+ D L + +++ DG P YN ++G + AL D M+++
Sbjct: 274 INGYCKMGRVEDALGYIQ--QEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQE 331
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PDV T+N +I+ +N + D A G+ +M ++GC P+ +FNTLI + + +E
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+++A E+ G T IL++ LC G L + G P + Y L++
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G G AL++++E+ G S + T+I+ L + + EA + ++M +GI
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+VTFN L++ LC R DA L +GL P+ +TY+ +++ Y ++ K+ +++
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILE 571
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKS 486
M GF D+ TY + ++GL A ++
Sbjct: 572 TMTANGFEIDVVTYGTLINGLCKAGRT 598
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 144/294 (48%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L+N V+ + Y+ M ++PDVVT N LI CR + A+ + EM
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G P+ +F TL++GF E + + + +M+E GC + VT +L++G C GRV
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A + G P Y V LC G+ AL+V+D + ++G+ P V T+
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I L + + EA G++ +M+ G LPD+ TFN L+ L R +A L + KGL
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGL 403
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD T++IL++ + G L EM G PD TYN +D L + K
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 171/380 (45%), Gaps = 16/380 (4%)
Query: 107 HDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
HD F + ++ L+ + E ++N + C P+ F+ + A
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC---------LPDTT-TFNTLIVAL 382
Query: 165 VKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
NR+ + L LA E K + P V +N+LIN K + + ++ M P
Sbjct: 383 SSQNRLEEALDLARELTVKGLS--PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D VT+NILI C K AL L EM GC + V++NT+I + + +E +
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M G S+VT L+DGLC R+ A EL+ + G+ P + Y ++ C +
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
GN A ++++ + G V+ TLI GL + + A L+ M +GI P +
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEML 462
N +++ L DA L + G PD +TY I+ R KE + + EM+
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680
Query: 463 DEGFIPDLATYNSYMDGLSN 482
++GF+P+ +++ +GL N
Sbjct: 681 NKGFMPEFSSFRMLAEGLLN 700
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R +GL E MR P+ YN LI+G+ K + A +D+M
Sbjct: 383 YNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM 442
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+D V P+VVT N L+ G C++ + + A+ F EM+ KG N V++ LIR F
Sbjct: 443 NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNI 502
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + + EM+E GC ++ L+ GL G++ +A ++ G P + L
Sbjct: 503 EKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + A E++ E+ G P + TLI + A LM+KM+KEG+
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGL 622
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+P VT+ L+ C G +A ++ R ++ST + P+ + Y+IL++ R+N+
Sbjct: 623 VPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLAL 682
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLS 481
+L+++M +G P+ T+N+ GL
Sbjct: 683 SLMDDMKVKGVKPNTNTFNAMFKGLQ 708
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 6/294 (2%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L+ + REF + M ++P+VVTF ILI+ C+ ++ D AL +F +M
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 254 KGCN-----PNVVSFNTLIRGFFGERKFDEGVNMAYEM-IELGCEFSSVTCEILVDGLCN 307
N P+V+++NTLI G + +EG+ + M + C ++VT L+DG C
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ A EL ++ GV P LV+ +C G A+E +E+ KG + +
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI + +A L ++ML+ G PD++ + L+ L G+ A +
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G PD +++++L++G+ R+N+ E ++ EM + G PD TYN+ + S
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS 602
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ AF N + + F+ M + P +Y LI+G + + D+A +M
Sbjct: 493 IRAFCNVNNIEKAMELFDEMLE-AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD+V+FN+LI+GFCR K D A + +EM G P+ V++NTLI F F
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEK 339
+ +M++ G + VT L+ C G + +A ++ D S V P Y L+
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC + +AL ++D++ KG P+ + +GL+ +A LM++M + PD
Sbjct: 672 LCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
Query: 400 SVTFNCLLEDLCDVGRTV 417
+T L E L VG T
Sbjct: 732 YITMEILTEWLSAVGETA 749
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 8/269 (2%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+ + N L++ R ++F L EM+E PNVV+F LI R+ DE + +
Sbjct: 304 EAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEV- 362
Query: 284 YEMIELG------CEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGL 336
+E + G E +T L+DGLC GR + LV S+ +P Y L
Sbjct: 363 FEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCL 422
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C A E+ D++ K G P+V+ TL++G+ + + A +M +G+
Sbjct: 423 IDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGL 482
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
++VT+ L+ C+V A L G PD + Y+ L+SG ++ +
Sbjct: 483 KGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASF 542
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++++M + GF PD+ ++N ++G K
Sbjct: 543 VLSKMKEAGFSPDIVSFNVLINGFCRKNK 571
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 157/356 (44%), Gaps = 15/356 (4%)
Query: 150 CPE--MERIFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
CP + I + ++ + R++D L L E ++ + P+ + +++ + K +
Sbjct: 186 CPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKV 245
Query: 207 DKAL------GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
+A+ G + V P+ + LIS CR+ + D A + + + G
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEA 305
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
S N L+ R+F + EM E+ + + VT IL++ LC RV +A E+
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365
Query: 321 FS---RRGVL--PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTLIEG 374
+ G L P Y L++ LC G L +V+ + + +P+ + LI+G
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDG 425
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ A L ++M K+G+ P+ VT N L++ +C GR A KGL +
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+TY L+ + N ++ L +EML+ G PD Y + + GLS A K R +
Sbjct: 486 AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 17/336 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F +A +++ L + +L R I N+LI+ + D AL D M++ +
Sbjct: 166 IRCFGRAQMVDESFLVY---NELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPK 222
Query: 221 VK--PDVVTFNILISGFCRNKKFDLAL------GLFREMREKGCNPNVVSFNTLIRGFFG 272
+ P+ T +I+ S + K A+ GL + E PN + LI
Sbjct: 223 AEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D ++ + +++LG + +C L+ L + L+ + + P
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342
Query: 333 YFGLVEKLCGEGNAGIALEVVDEL---WKKGNL--PSVIACTTLIEGLRRLRKGVEASGL 387
+ L+ LC ALEV +++ G L P VI TLI+GL ++ + E GL
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402
Query: 388 MEKMLKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+E+M + +P++VT+NCL++ C A L + G+ P+ +T + LV G
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ R NEM +G + TY + + N
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 24/295 (8%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF--N 264
+K L + ++ V +LI F R + D + ++ E+ C ++ N
Sbjct: 141 NKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL----CPSRRLTHIRN 196
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGLCNEGRVLKACE------ 316
LI F + + D+ +++ EM++ EF +S T I+ L +V +A +
Sbjct: 197 ILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVG 256
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
LV F+ V P L+ +LC G A +V+ L K G + +C L+ L
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALG 316
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG------ 430
R R+ + L+ +M + I P+ VTF L+ LC R +A L + G
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEA--LEVFEKMNGGESNGF 374
Query: 431 -LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE-GFIPDLATYNSYMDGLSNA 483
++PD +TY+ L+ G + R++EG LV M + +P+ TYN +DG A
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKA 429
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 41/195 (21%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N F + N++++ A+E ++++ + +P YN LI+ F K +F A
Sbjct: 559 FNVLINGFCRKNKLDE---AYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 215 RMVRD------------------------------------RVKPDVVTFNILISGFCRN 238
+MV++ +V P+ V +NILI+ CR
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ DLAL L +M+ KG PN +FN + +G + + + M E C +T
Sbjct: 676 NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITM 735
Query: 299 EILVDGLCNEGRVLK 313
EIL + L G K
Sbjct: 736 EILTEWLSAVGETAK 750
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 2/311 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +R + + R P +Y LI+GF K +D M R ++ PD VT+ +I
Sbjct: 341 AEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIH 400
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C+ K A LF EM KG P+ V++ LI G+ + E ++ +M+E G
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT LVDGLC G V A EL+ + S +G+ P Y L+ LC GN A++++
Sbjct: 461 NVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLM 520
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+E+ G P I TT+++ ++ + +A L+ ML +G+ P VTFN L+ C
Sbjct: 521 EEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMS 580
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G D +RL KG+ P+ T++ L+ Y N + + M +G +PD TY
Sbjct: 581 GMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTY 640
Query: 474 NSYMDGLSNAR 484
N + G AR
Sbjct: 641 NILIKGHCKAR 651
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 160/322 (49%), Gaps = 3/322 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ V+ + + ++ L E +++ G +P+ YN +I+ K +A
Sbjct: 290 YSVIVDGYCQVEQLGKVLKLMEELQR--KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRV 347
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R+ PD V + LISGF ++ + LF EM+ K P+ V++ ++I G K
Sbjct: 348 MKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGK 407
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EM+ G + VT L+DG C G + +A L +G+ P Y
Sbjct: 408 VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTA 467
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV+ LC G IA E++ E+ +KG P+V LI GL ++ +A LME+M G
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD++T+ +++ C +G A L + KGL P +T+++L++G+ ++GE
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587
Query: 456 NLVNEMLDEGFIPDLATYNSYM 477
L+ MLD+G +P+ T+NS M
Sbjct: 588 RLIKWMLDKGIMPNATTFNSLM 609
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 35/299 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y LI+G+ K E +A +++MV + P+VVT+ L+ G C+ + D+A
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM EKG PNV ++N LI +GLC
Sbjct: 484 LLHEMSEKGLQPNVCTYNALI-----------------------------------NGLC 508
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +L+ + G P Y +++ C G A E++ + KG P+++
Sbjct: 509 KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIV 568
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L+ G + L++ ML +GI+P++ TFN L++ C +
Sbjct: 569 TFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ PD TY+IL+ G+ + KE L EM+++GF A+YNS + G +K
Sbjct: 629 HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 138/268 (51%), Gaps = 3/268 (1%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+ V++NI++ C+ K A L +M +G P+VVS++ ++ G+ + + + +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
E+ G + + T ++ LC GRV++A +++ + + P + Y L+
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
GN + ++ DE+ +K +P + T++I GL + K VEA L +ML +G+ PD VT+
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ C G +A L KGL P+ +TY LV G + L++EM +
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 464 EGFIPDLATYNSYMDGL---SNARKSVR 488
+G P++ TYN+ ++GL N ++V+
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVK 518
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 144/292 (49%), Gaps = 5/292 (1%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD---LALGLF 248
+++V V+ +A +D+++ V V + N+ ++ + FD A +F
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARL--SNSFDGIRTAFRVF 240
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
RE E G N VS+N ++ K E ++ +M G V+ ++VDG C
Sbjct: 241 REYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQV 300
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
++ K +L+ + R+G+ P + Y ++ LC G A +V+ + + P +
Sbjct: 301 EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TTLI G + L ++M ++ I+PD VT+ ++ LC G+ V+A +L +
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL PD +TY L+ GY + KE +L N+M+++G P++ TY + +DGL
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 1/208 (0%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNE-GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+++ G S +C + + L N + A + ++S GV Y ++ LC
Sbjct: 206 KLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQL 265
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A ++ ++ +GN+P V++ + +++G ++ + + LME++ ++G+ P+ T+
Sbjct: 266 GKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTY 325
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N ++ LC GR V+A+++ + + + PD + Y L+SG+ + L +EM
Sbjct: 326 NSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385
Query: 464 EGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ +PD TY S + GL A K V +
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVVEARK 413
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
Query: 169 RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+M + A E +R ++D +P++ +NVL+NGF + M+ + P+
Sbjct: 544 KMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNAT 603
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFN L+ +C + +++ M +G P+ ++N LI+G R E + EM
Sbjct: 604 TFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM 663
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E G ++ + L+ G + +A +L + G + + Y V+ EGN
Sbjct: 664 VEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNW 723
Query: 347 GIALEVVDELWKK 359
LE+ DE +K
Sbjct: 724 ENTLELCDEAIEK 736
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N F + + DG + M L G P+ + +N L+ + + Y
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWM--LDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKG 627
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD T+NILI G C+ + A L +EM EKG + S+N+LI+GF+ +K
Sbjct: 628 MHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
F+E + EM G +I VD EG EL
Sbjct: 688 FEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ VN K ++ F + + +P+V YN +I+G+ + A D M
Sbjct: 252 FNIMVNVLCKEGKLKKAR-EFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++PD T+ LISG C+ + + A GLF +M E G PN V++NTLI G+ +
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM++ G S T +LV L EGR+ +A +++ + ++G++P Y L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ GNA A ++ +E+ KG P+ + T+LI L R + EA L EK+L +G+
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD + FN +++ C G A L K + PD +T++ L+ G RE + +E
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L++EM G PD +YN+ + G
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISG 573
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F V + R ++ F M++ P + N +++ F+K + A Y
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R R+ V TFNI+++ C+ K A M G PNVVS+NT+I G+
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M G E S T L+ G+C EGR+ +A L G++P Y
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C +G+ A DE+ KKG +PSV L+ L + EA ++++M K+G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I+PD++T+N L+ G A L +KG++P +TY L+ +R NR KE +
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L ++LD+G PD+ +N+ +DG
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDG 503
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 1/322 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R+ + F+ M + I P+ YN LI+G+ + ++A + D MV+
Sbjct: 326 ISGMCKEGRLEEASGLFDKMVE-IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P V T+N+L+ + A + +EMR+KG P+ +++N LI G+ +
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EM+ G E + VT L+ L R+ +A +L +GV P + +V+
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C GN A ++ E+ +K P + TL++G R K EA L+++M + GI PD
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 564
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+++N L+ G DA R+R + G +P +TY+ L+ + E L+ E
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624
Query: 461 MLDEGFIPDLATYNSYMDGLSN 482
M+++G PD +TY S ++G+ N
Sbjct: 625 MVNKGISPDDSTYLSLIEGMGN 646
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 216 MVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ RDR VK +V F++L+ C ++ D A F M+EKG P + + N ++ F
Sbjct: 169 LSRDRLSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKL 227
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + EM L + T I+V+ LC EG++ KA E + G P Y
Sbjct: 228 NRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSY 287
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ GN A ++D + KG P +LI G+ + + EASGL +KM++
Sbjct: 288 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 347
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G++P++VT+N L++ C+ G A R KG+ P TY++LV E R E
Sbjct: 348 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 407
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLS---NARKS 486
++++ EM +G IPD TYN ++G S NA+K+
Sbjct: 408 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 443
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 5/264 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V+A RM + + MRK +I P YN+LING+ +C KA ++
Sbjct: 392 YNLLVHALFMEGRMGEADDMIKEMRKKGII---PDAITYNILINGYSRCGNAKKAFDLHN 448
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++P VT+ LI R + A LF ++ ++G +P+V+ FN ++ G
Sbjct: 449 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 508
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM VT L+ G C EG+V +A L+ + RRG+ P Y
Sbjct: 509 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 568
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ G+ A V DE+ G P+++ LI+ L + ++G A L+++M+ +
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628
Query: 395 GILPDSVTFNCLLEDLCDVGRTVD 418
GI PD T+ L+E + +V V+
Sbjct: 629 GISPDDSTYLSLIEGMGNVDTLVE 652
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 173/336 (51%), Gaps = 1/336 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F P +N+F NR++ L + KL +P + + L+ G +
Sbjct: 85 FGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKL-GHQPDTATFTTLVRGLCVVGKIG 143
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+AL +D+MV + +P+VVT+ L++G C++++ AL LF EM KG +P++ ++N+LI
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI 203
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
++ + EM++ + V+ I+VD LC EG+V +A ++V + GV
Sbjct: 204 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE 263
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L++ C A++V D + + G + +V++ TLI G ++++ +A L
Sbjct: 264 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
E+M ++ ++P+++T++ L+ LC VGR DA L G P+ +TY IL+ +
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK 383
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+R E L+ + PD+ YN +DG+ A
Sbjct: 384 NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRA 419
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 155/332 (46%), Gaps = 3/332 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N K ++ + L F M + G P + YN LI+ E+ + MV+
Sbjct: 168 MNGLCKDRQLTEALNLFSEM--IAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKS 225
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ P+VV+ NI++ C+ K A + M + G P+VV++ L+ G + DE
Sbjct: 226 KIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEA 285
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + M+ GC + V+ L++G C R+ KA L + R+ ++P Y L+
Sbjct: 286 VKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHG 345
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A+ + +E+ G +P+++ + L++ L + + EA L++ + + PD
Sbjct: 346 LCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPD 405
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+N ++ +C G A L + +GL PD T++I++ G + E L
Sbjct: 406 VQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFR 465
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
EM + G + + TYN+ GL K+ R +
Sbjct: 466 EMDENGCLRNGCTYNTITQGLLQNNKTSRAIQ 497
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y L+NG K R+ +AL + M+ + PD+ T+N LI C ++
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM + PNVVS N ++ E K E ++ MI+ G E VT L+DG C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +A ++ R G + Y L+ C A+ + +E+ ++ +P+ +
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+TLI GL + + +A L +M+ G +P+ VT++ LL+ LC R +A L
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
LDPD Y+I + G R + +L + + G PD+ T+N + GL
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGL 451
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 155/313 (49%), Gaps = 1/313 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + P + + L+ K + + L +M + PDV T
Sbjct: 35 NTLDDALSSFHRMLHM-HPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYT 93
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
I+I+ FC + D AL + ++ + G P+ +F TL+RG K E +++ +M+
Sbjct: 94 LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + VT L++GLC + ++ +A L + +G+ P F Y L+ LC
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+++E+ K +P+V++ +++ L + K EA +++ M++ G+ PD VT+ L+
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ C +A ++ + G + ++Y+ L++GY + R + L EM + I
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333
Query: 468 PDLATYNSYMDGL 480
P+ TY++ + GL
Sbjct: 334 PNTMTYSTLIHGL 346
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V N++++ K + +A D M++ V+PDVVT+ L+ G C + D A+ +
Sbjct: 229 PNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKV 288
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M GC NVVS+NTLI G+ ++ D+ + + EM +++T L+ GLC+
Sbjct: 289 FDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCH 348
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L + G +P Y L++ LC A+ ++ + P V
Sbjct: 349 VGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQV 408
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
I+G+ R A L + G+ PD T N ++ LC G +A +L
Sbjct: 409 YNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMD 468
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN--ARK 485
G +G TY+ + G + N+ L+ EML GF D++T + LS+ +
Sbjct: 469 ENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQ 528
Query: 486 SVRQ 489
SV+Q
Sbjct: 529 SVKQ 532
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 146/308 (47%), Gaps = 5/308 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ V+A K ++ + A + + +I G P V Y L++G E D+A+ +D
Sbjct: 234 LNIVVDALCKEGKVTE---AHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFD 290
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MVR+ +VV++N LI+G+C+ ++ D A+ LF EM + PN ++++TLI G
Sbjct: 291 MMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVG 350
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + + EM+ G + VT IL+D LC R+ +A L+ + P Y
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYN 410
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ +C G+ A ++ L +G P V +I GL + EAS L +M +
Sbjct: 411 IAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDEN 470
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G L + T+N + + L +T A +L +G D T +LV + + +
Sbjct: 471 GCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSV 530
Query: 455 ENLVNEML 462
+ ++ E +
Sbjct: 531 KQILCEFM 538
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 147 IFSCPEMERIFHFAV--NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFV 201
+ +C ++ + +++ + K +R+ + + A+ K I+G P V +YN+ I+G
Sbjct: 362 MVACGQIPNLVTYSILLDYLCKNHRLAEAM----ALLKAIEGSNLDPDVQVYNIAIDGMC 417
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ + + A + + ++PDV T NI+I G C+ D A LFREM E GC N
Sbjct: 418 RAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGC 477
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++NT+ +G K + + EM+ G T +LV L ++G +++ +F
Sbjct: 478 TYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEF 537
Query: 322 SR 323
R
Sbjct: 538 MR 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 312 LKACELVIDFSRR----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+K V+ S++ G+ P + ++ C AL V+ ++ K G+ P
Sbjct: 69 MKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTAT 128
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL+ GL + K EA + +KM+ EG P+ VT+ L+ LC + +A L
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ PD TY+ L+ K L+NEM+ +P++ + N +D L K
Sbjct: 189 AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGK 246
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 183/391 (46%), Gaps = 25/391 (6%)
Query: 103 DSFRHDHT-----TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIF 157
D+ R D T+ +VR+L + R +L+ ++ CP P+ + +
Sbjct: 152 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCP---------PD-DVTY 201
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF--DKALGFYDR 215
V+ K +R+++ AM P + YN ++ CREF +
Sbjct: 202 ATIVSVLCKLDRLDEATEVLAAMP------PVAASYNAIV--LALCREFRMQEVFSVVSD 253
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++P+V+T+ ++ FC+ + +A + M GC PNVV+F L+RG F + +
Sbjct: 254 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 313
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ ++M M+ G S+V+ IL+ GLC+ G + A ++ + G P Y
Sbjct: 314 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 373
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G+ G A+ + +++ + G P+V+ T +++ + +A L++KML E
Sbjct: 374 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 433
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P++VTFN L+ LCD R A + G P+G TY+ L+ G RE +
Sbjct: 434 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 493
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++V EM G L TYN+ + GL R S
Sbjct: 494 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 524
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 163/365 (44%), Gaps = 17/365 (4%)
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
VR LA++ + L + PC+ + + AV AF +A + L
Sbjct: 62 VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVA----------AVGAFARAGAPDRALK 111
Query: 176 AF-EAMRKLIDGRPSV-SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
F A+ L RP+ +YN LI+ ++ + YD M +D V P+V T+N+L+
Sbjct: 112 TFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVR 171
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+N + A + EM KGC P+ V++ T++ + DE + M + +
Sbjct: 172 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASY 231
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+++ V LC E R+ + +V D RG+ P Y +V+ C G +A ++
Sbjct: 232 NAI-----VLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 286
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ G P+V+ T L+ GL + +A + M+ EG P +V++N L+ LC V
Sbjct: 287 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 346
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A + G P+ TY L+ G+++ ++ N+M G P++ Y
Sbjct: 347 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 406
Query: 474 NSYMD 478
+ +D
Sbjct: 407 TNMVD 411
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 19/347 (5%)
Query: 65 TNNQITPSSLLHFLKSKLHHHPQFTHYDFHIF-AWASTIDSFRHDHTTFLFIVRSLASSY 123
T N +T ++L+ L H + + + WA + S+ ++R L S
Sbjct: 295 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYN-------ILIRGLCSVG 347
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
S+LN + + C P + R + ++ F KA + + + M +
Sbjct: 348 DLKGASSILNSMEQHGCF---------PNV-RTYSTLIDGFSKAGDLGGAISIWNDMSR- 396
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
+P+V +Y +++ F K F++A D+M+ + P+ VTFN LI C ++
Sbjct: 397 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 456
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
ALG+F EMR GC PN ++N LI G F E + ++M EM G E S VT +V
Sbjct: 457 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 516
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC +A V +G+ P F + ++ C EG +A ++ +
Sbjct: 517 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHR 576
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++ T L+ L K V+A + KML EGI P++VT+N L+ +
Sbjct: 577 NILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 3/335 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE 205
I C F V R++D L + M + +G PS YN+LI G +
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM--VAEGWAPSTVSYNILIRGLCSVGD 348
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A + M + P+V T++ LI GF + A+ ++ +M GC PNVV +
Sbjct: 349 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++ F + F++ ++ +M+ C ++VT L+ LC+ RV +A + + R G
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P Y L+ L EGN G AL +V E+ G S++ T++ GL + R EA
Sbjct: 469 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ KM+ +GI P++ TF+ ++ C G A + + + + Y IL++
Sbjct: 529 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 588
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ + + +ML EG P+ T+N + G+
Sbjct: 589 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 16/352 (4%)
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
A P P G + R AV A ++ LA + MR + G P V
Sbjct: 42 GAGPPPAPGTG-----DAARAHEAAVRRLAAAGDVDGVQLALQEMR--LRGVPCTEGALV 94
Query: 196 L-INGFVKCREFDKALGFYDRMVRDR--VKP-DVVTFNILISGFCRNKKFDLALGLFREM 251
+ F + D+AL + R V D +P + +N LI R + ++ M
Sbjct: 95 AAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNM 154
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
R+ G +PNV ++N L+R + M EM GC VT +V LC R+
Sbjct: 155 RKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRL 214
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A E++ P Y +V LC E VV ++ +G P+VI TT+
Sbjct: 215 DEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTI 269
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
++ + + A ++ +M+ G P+ VTF L+ L D GR DA + +G
Sbjct: 270 VDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGW 329
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P ++Y+IL+ G K +++N M G P++ TY++ +DG S A
Sbjct: 330 APSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKA 381
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 173/367 (47%), Gaps = 41/367 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ F K +++ L F+ R + P V YN LINGF K + D+A
Sbjct: 48 YNTLLHGFCKVGELDEALKIFDGAVKRGFV---PDVVTYNALINGFCKADKLDEAQRILQ 104
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFD--------------------LALGLFREMR-- 252
RMV + + PDVVT+N L++G C+N + D L GL RE+R
Sbjct: 105 RMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGV 164
Query: 253 -----------EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
++G P V ++N LI G E + +E + +++ G E ++T +
Sbjct: 165 SEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 224
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGLC GRV A ++ D +G +P + ++ LC E A ++ + KG
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV---GRTVD 418
P+ I+ TLI G R K +A ++MLK G+ P VT+N L++ LC GR +
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L KG PD +TY L+ G + + + L+ M +G IP++ TYNS +
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404
Query: 479 GLSNARK 485
GL K
Sbjct: 405 GLCGLEK 411
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 168/333 (50%), Gaps = 5/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ RM+D +E M K P V YN L++GF K E D+AL +D
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIK-AGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ PDVVT+N LI+GFC+ K D A + + M + P+VV++N+L+ G +
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR-VLKACELVIDFSRRGVLPKDFDYFG 335
DE + +++ G + +T L+ GLC E R V +A +L ++G P+ Y
Sbjct: 132 DEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ L E A E+ L K G P I T I+GL + + +A +++ M ++G
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+PD V+ N ++ LC R +A+ L KG P+ ++++ L+ G R + K+
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
EML G P + TYN +DGL AR+ R
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 341
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 139/260 (53%), Gaps = 3/260 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN+LI+G +K ++A + +V+ ++PD +T+ + I G C+ + + AL
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ ++M EKGC P+VVS N +I G E++ DE + M GC ++++ L+ G C
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC---GEGNAGIALEVVDELWKKGNLP 363
G+ KA + +RGV P Y LV+ LC EG A+ + D + +KG +P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ + LI+GL + K +A L+ M +G +P+ T+N L+ LC + + +A L
Sbjct: 360 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419
Query: 424 LLASTKGLDPDGMTYHILVS 443
+ KG PD +TY ++S
Sbjct: 420 VAMVEKGCVPDTITYGTIIS 439
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
MR+ G PN +++N L+ GLCN GR
Sbjct: 1 MRKHGFWPNRITYNALL-----------------------------------SGLCNGGR 25
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A L + G P Y L+ C G AL++ D K+G +P V+
Sbjct: 26 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNA 85
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI G + K EA ++++M+ E ++PD VT+N L+ LC GR D R+L KG
Sbjct: 86 LINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV---DEARMLIVDKG 142
Query: 431 LDPDGMTYHILVSGYTRENRR-KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ +TY L+SG RE R E L +L +G+ P++ TYN +DGL
Sbjct: 143 FSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGL 193
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ G P Y L+ LC G A + + + K G P V+ TL+ G ++ +
Sbjct: 3 KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELD 62
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA + + +K G +PD VT+N L+ C + +A R+ ++ L PD +TY+ LV
Sbjct: 63 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLV 122
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+G + R E L+ +D+GF P++ TY++ + GL + V +
Sbjct: 123 NGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEA 167
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K G P+ +T+N LL LC+ GR DA L G PD +TY+ L+ G+ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + + + GF+PD+ TYN+ ++G A K
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADK 95
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F R++ LAF + K+I +P++ + LIN K +F +A+ +D MV
Sbjct: 140 INCFSHLQRVD---LAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+PDV T+ +I+G C+ + A GL ++M E GC PNVV+++T+I +R+ +E
Sbjct: 197 RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNE 256
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+++ M G T L+ GLCN + +A L+ + ++P + LV+
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+C EG A V+ + + G P V+ ++L+ G + VEA L + M+ +G P
Sbjct: 317 TICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKP 376
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D ++N L+ C V R +A +L +GL P+ ++Y+ L+ G + +E NL
Sbjct: 377 DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLF 436
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
M G +P+L TY+ +DG
Sbjct: 437 KNMHTNGNLPNLFTYSILLDGF 458
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 171/335 (51%), Gaps = 1/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A VK + D +++ +L P++ ++LIN F + D A ++
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ ++P +VTF LI+ C+ KF A+ LF +M +GC P+V ++ T+I G +
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +M E GC+ + VT ++D + RV +A ++ +G+ P F Y L
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSL 279
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC A +++E+ +P ++ L++ + + K EA G+++ M + G+
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT++ L+ V+A +L TKG PD +Y+IL++GY + R E +
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L NEM+ +G P+ +YN+ + GL S+R+ R
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQL-GSLREAR 433
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 155/331 (46%), Gaps = 1/331 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K R+N+ L F M K+ P + YN LI G ++ +A + M
Sbjct: 245 IDSHRKDRRVNEALDIFSYM-KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN 303
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD+VTFN+L+ C+ K A G+ + M E G P+VV++++L+ G+ + E
Sbjct: 304 IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEAR 363
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI GC+ + IL++G C R+ +A +L + +G+ P + Y L+ L
Sbjct: 364 KLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGL 423
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ A + + GNLP++ + L++G + +A L M P+
Sbjct: 424 CQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNL 483
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V +N L++ +C G DA +L KGL P+ Y +++G +E E
Sbjct: 484 VMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRN 543
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
M ++G PD +YN + G + + R +
Sbjct: 544 MEEDGCPPDEISYNVIIRGFLHHKDESRAVQ 574
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +NVL++ K + +A G M V+PDVVT++ L+ G+ + A L
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KGC P+V S+N LI G+ ++ DE + EMI G ++V+ L+ GLC
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQ 425
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A L + G LP F Y L++ C +G G A + + + P+++
Sbjct: 426 LGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVM 485
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ + + +A L ++ +G+ P++ + ++ LC G +A
Sbjct: 486 YNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNME 545
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G PD ++Y++++ G+ L+ EM D+GFI D+ T
Sbjct: 546 EDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y+ +I+ K R ++AL + M + PD+ T+N LI G C ++ A
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EMR P++V+FN L+ E K E + M E+G E VT L+ G
Sbjct: 295 LLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V++A +L +G P F Y L+ C A ++ +E+ +G P+ +
Sbjct: 355 LRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNV 414
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLL 425
+ TLI GL +L EA L + M G LP+ T++ LL+ C G A RL R +
Sbjct: 415 SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
ST P+ + Y+IL+ + ++ L +E+ +G P+ Y + ++GL
Sbjct: 475 QSTYS-KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGL 528
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 181 RKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
RKL D +P V YN+LING+ K + D+A ++ M+ + P+ V++N LI G
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C+ A LF+ M G PN+ +++ L+ GF + F + + M + +
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPN 482
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
V IL+D +C G + A +L + +G+ P Y ++ LC EG ALE
Sbjct: 483 LVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFR 542
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+ + G P I+ +I G + A L+ +M +G + D
Sbjct: 543 NMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N + K R+++ F M + G P+ YN LI+G + +A +
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEM--IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKN 438
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P++ T++IL+ GFC+ F A LFR M+ PN+V +N LI
Sbjct: 439 MHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN 498
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + E+ G + ++ +++GLC EG + +A E + G P + Y
Sbjct: 499 LRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNV 558
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
++ + A++++ E+ KG + V
Sbjct: 559 IIRGFLHHKDESRAVQLIGEMRDKGFIADV 588
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ VN K ++ F + + +P+V YN +I+G+ + A D M
Sbjct: 230 FNIMVNVLCKEGKLKKAR-EFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++PD T+ LISG C+ + + A GLF +M E G PN V++NTLI G+ +
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM++ G S T +LV L EGR+ +A +++ + ++G++P Y L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ GNA A ++ +E+ KG P+ + T+LI L R + EA L EK+L +G+
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD + FN +++ C G A L K + PD +T++ L+ G RE + +E
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L++EM G PD +YN+ + G
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISG 551
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F V + R ++ F M++ P + N +++ F+K + A Y
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R R+ V TFNI+++ C+ K A M G PNVVS+NT+I G+
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M G E S T L+ G+C EGR+ +A L G++P Y
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C +G+ A DE+ KKG +PSV L+ L + EA ++++M K+G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I+PD++T+N L+ G A L +KG++P +TY L+ +R NR KE +
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
+L ++LD+G PD+ +N+ +DG
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDG 481
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R+ + F+ M + I P+ YN LI+G+ + ++A + D MV+
Sbjct: 304 ISGMCKEGRLEEASGLFDKMVE-IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P V T+N+L+ + A + +EMR+KG P+ +++N LI G+ +
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EM+ G E + VT L+ L R+ +A +L +GV P + +V+
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C GN A ++ E+ +K P + TL++G R K EA L+++M + GI PD
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 542
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+++N L+ G DA R+R + G +P +TY+ L+ + E L+ E
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M+++G PD +TY S ++G+ N
Sbjct: 603 MVNKGISPDDSTYLSLIEGMGNV 625
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 216 MVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ RDR VK +V F++L+ C ++ D A F M+EKG P + + N ++ F
Sbjct: 147 LSRDRLSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKL 205
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + EM L + T I+V+ LC EG++ KA E + G P Y
Sbjct: 206 NRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSY 265
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ GN A ++D + KG P +LI G+ + + EASGL +KM++
Sbjct: 266 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 325
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G++P++VT+N L++ C+ G A R KG+ P TY++LV E R E
Sbjct: 326 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 385
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLS---NARKS 486
++++ EM +G IPD TYN ++G S NA+K+
Sbjct: 386 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKA 421
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 5/264 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V+A RM + + MRK +I P YN+LING+ +C KA ++
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGII---PDAITYNILINGYSRCGNAKKAFDLHN 426
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++P VT+ LI R + A LF ++ ++G +P+V+ FN ++ G
Sbjct: 427 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 486
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM VT L+ G C EG+V +A L+ + RRG+ P Y
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ G+ A V DE+ G P+++ LI+ L + ++G A L+++M+ +
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606
Query: 395 GILPDSVTFNCLLEDLCDVGRTVD 418
GI PD T+ L+E + +V V+
Sbjct: 607 GISPDDSTYLSLIEGMGNVDTLVE 630
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + K+ + + L + M P+ + Y+ ++ + +A+ R
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + PDVVT +LI C+ A+ LF EMR KGC P+VV++N LI+GF +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + ++ GC+ ++ +++ LC+ GR + A +L+ R+G LP + L
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G G AL V++ + K G+ P+ + LI+G + A +E M+ G
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N LL LC G+ DA + S+KG P ++Y+ ++ G + + +
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM +G PDL T S + GLS K
Sbjct: 448 LLEEMCYKGLKPDLITCTSVVGGLSREGK 476
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 36/342 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++A K + + + F MR +P V YNVLI GF K D+A+ F ++
Sbjct: 223 IDATCKESGVGQAMKLFNEMRNK-GCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI-----RGFFGE-- 273
+PDV++ N+++ C ++ A+ L M KGC P+VV+FN LI +G G+
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341
Query: 274 ---------------RKFD---------EGVNMAYEMIEL----GCEFSSVTCEILVDGL 305
R F+ +G++ A E +E+ GC VT IL+ L
Sbjct: 342 NVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTAL 401
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C +G+V A ++ S +G P Y +++ L G A +A+E+++E+ KG P +
Sbjct: 402 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 461
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I CT+++ GL R K EA + + I P++ +N ++ LC +T A
Sbjct: 462 ITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLAD 521
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
KG P TY L+ G T E ++ L NE+ G +
Sbjct: 522 MVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 147/299 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V VLI+ K +A+ ++ M KPDVVT+N+LI GFC+ + D A+
Sbjct: 214 PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRF 273
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+++ GC P+V+S N ++R ++ + + + M+ GC S VT IL++ LC
Sbjct: 274 LKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQ 333
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + KA ++ + G P + L++ C A+E ++ + +G P ++
Sbjct: 334 KGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVT 393
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ L + K +A ++ ++ +G P +++N +++ L VG+ A L
Sbjct: 394 YNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMC 453
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL PD +T +V G +RE + +E + + P+ YNS + GL ++++
Sbjct: 454 YKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQT 512
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 11/295 (3%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
I+RSL S R+ + +L + C P + F+ +N + +
Sbjct: 291 MILRSLCSGGRWMDAMKLLATMLRKGCL---------PSVV-TFNILINFLCQKGLLGKA 340
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
L E M K P+ +N LI GF + D+A+ + + MV PD+VT+NIL++
Sbjct: 341 LNVLEMMPKH-GHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C++ K D A+ + ++ KGC+P+++S+NT+I G K + V + EM G +
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+TC +V GL EG+V +A + R + P F Y ++ LC +A++ +
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
++ KG P+ TTLI+G+ +AS L ++ G++ S+ LE
Sbjct: 520 ADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSLE 574
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E ++ F + M PDV+ LI FC+ + A + + E G +V S+N
Sbjct: 94 ELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYN 153
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI G+ + +E + + M G ++ T + ++ LC+ G++ +A +++ +
Sbjct: 154 VLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQS 210
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
P L++ C E G A+++ +E+ KG P V+ LI+G + + EA
Sbjct: 211 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEA 270
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++K+ G PD ++ N +L LC GR +DA +L KG P +T++IL++
Sbjct: 271 IRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINF 330
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++ + N++ M G P+ ++N + G N +
Sbjct: 331 LCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGK 370
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 3/238 (1%)
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
RN + + M KG +P+V++ LIR F + + + E G
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+ +L+ G C G + +A + R GV P Y ++ LC G A++V+
Sbjct: 151 SYNVLISGYCKSGEIEEALRV---LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ P V+ CT LI+ + +A L +M +G PD VT+N L++ C GR
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+A R + G PD +++++++ R + L+ ML +G +P + T+N
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 372 IEGLRRL-RKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
I LRRL R G E S +E M +G PD + L+ + C +GRT +A ++ +
Sbjct: 83 IRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEE 142
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G D +Y++L+SGY + +E +++ M G P+ ATY++ + L + R ++
Sbjct: 143 SGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCD-RGKLK 198
Query: 489 QT 490
Q
Sbjct: 199 QA 200
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 201/431 (46%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L S FSE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A+++ + D + + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G +P+V +++ LI G E K D+ + EM+E
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLE 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G +SVT L+DG C G V A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++DE+ G P I TTLI+G + A + M++E I D V + L+
Sbjct: 301 AHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C EG+ +A V D + K G PSV++ TL+ G RL E L M G
Sbjct: 148 LMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA++L KGL P+ +T+ L+ G+ +
Sbjct: 208 VHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLLPDLVTYNALIYGL 292
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESK 227
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 6/330 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+R + + R+ L F+A +L +P V Y LING K D A +
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 214 DRMVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+MV +P+ T+N L+ G C+ + D A + E R++ P+VV++NTL+ F
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ DE + +M E G + V+ ++ GLC R+ A E+ + R P
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +++ LC A +++D + +G P ++A T L+ G + A GL+ +M+
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRR 451
+G +PD VT+ +++ LC VGR DA + R L + K P+ +TY L+ GY R +R
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK-CSPNVVTYSALIGGYCRASRV 358
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
EG ++ EM P++ TYN+ + GLS
Sbjct: 359 DEGGKVMREM---ACRPNVVTYNTMIWGLS 385
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ ++ L S + E +L+ + + C P++ + V F
Sbjct: 233 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR---------PDLV-AYTPLVLGF 282
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A R++ A +R+++ P V Y V+I+ K D A + +V ++
Sbjct: 283 SAAGRLDS---ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 339
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+VVT++ LI G+CR + D + REM C PNVV++NT+I G + +E M
Sbjct: 340 PNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGM 396
Query: 283 AYEMIELG 290
EM E G
Sbjct: 397 FREMSECG 404
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ K R++D A E R+L+ + P+V Y+ LI G+ + D+
Sbjct: 310 YTVVIDKLCKVGRVDD---AHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 366
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M +P+VVT+N +I G + + A G+FREM E G P+ ++ L R
Sbjct: 367 EMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 153/295 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN +ING+ +F+ A + M +KPD T+N IS C+ ++ + A G
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ ++ E G PN V++N LI G + D+ EM+ G S T +L+ L
Sbjct: 309 VLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R+ +A +++ + +GV P Y + C GNA AL + DE+ +K P+V
Sbjct: 369 LEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVE 428
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+ + + EA +K +KEG+LPD + FN L++ C G A +L
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ PD +T++ L+ GY RE + +E + L++EM + G PD +YN+ + G S
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYS 543
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN LI+G + DKA + D M+ + V T+N+LI K+ + A +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EMREKG P+VV++N I G+ + +++ EM+E + T L+D
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ +A E + G+LP + L++ C GN A +++ E+ +P +
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G R RK EA L+++M + GI PD +++N L+ G DA +
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ G DP +TY+ L+ GY++ E L+ EM +G PD +TY
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 129/271 (47%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A Y+ MV+ +K +VTFNI+I+ CR K+ A M G PNVV++NT+I
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ KF+ + M + + T + LC E R+ +A ++ G++P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L++ C +G+ A DE+ +G + SV LI L ++ EA ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++M ++G+ PD VT+N + C G A L K + P TY L+ + +
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
NR E E + + EG +PD+ +N+ +DG
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDG 471
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++A R+ + + MR+ P V YN+ ING+ +C KAL +D M
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREK-GVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V ++P V T+ LI F + + A F++ ++G P+++ FN LI G
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + EM VT L+ G C E +V +A +L+ + RG+ P Y L
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G+ ALEV DE+ G P+++ LI+G ++ + A L+ +M +GI
Sbjct: 539 ISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598
Query: 397 LPDSVTFNCLLEDL 410
PD T+ ++E +
Sbjct: 599 TPDDSTYLYVIEAM 612
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 4/276 (1%)
Query: 216 MVRDRVK-PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ R+R+ + F++L+S +C+ +K D AL M+E P + N+L+
Sbjct: 137 LARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLN 196
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + EM+++ + S VT I+++ LC EG+ KA + + GV P Y
Sbjct: 197 KIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYN 256
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C G A ++ + K P + I L + R+ EASG++ K+L+
Sbjct: 257 TVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES 316
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++P++VT+N L++ C+ G A R +G+ TY++L+ E R +E
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL---SNARKSV 487
E+++ EM ++G PD+ TYN ++G NA+K++
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKAL 412
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 169/329 (51%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A K N+ + + E M+ L ++ Y++LIN F + + AL +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +PD+VT N L++GFC + A+ L +M E G P+ +FNTLI G F +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + M+ GC+ VT I+V+GLC G + A L+ + + P Y +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC N AL + E+ KG P+V+ +LI L + +AS L+ M++ I
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VTF+ L++ G+ V+A++L + +DPD TY L++G+ +R E ++
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + P++ TYN+ + G A++
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR++D + M ++ +P +N LI+G + +A+ DRMV
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ I+++G C+ DLAL L ++M + P VV +NT+I + ++ +
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LCN GR A L+ D R + P + L++
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY L+ G+ + + + +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G +PD+ TY+ +DGL N K
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGK 481
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 165 VKANRMNDGLL--AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDR 220
+ NR+ND L A ++ RP SI ++ L++ K +FD + ++M
Sbjct: 52 ISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ ++ T++ILI+ FCR + LAL + +M + G P++V+ N+L+ GF + + V
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M+E+G + S T L+ GL R +A LV +G P Y +V L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ +AL ++ ++ + P V+ T+I+ L + +A L +M +GI P+
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ LC+ GR DA RL + ++P+ +T+ L+ + +E + E E L +E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ PD+ TY+S ++G
Sbjct: 352 MIKRSIDPDIFTYSSLINGF 371
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 158/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++A +ND L F M K I RP+V YN LI + A
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ A V ++ G LP ++ + L++GL K A + E + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ +TY ++SG+ R+ ++E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM +EG +PD TYN+
Sbjct: 556 DALFREMKEEGPLPDSGTYNT 576
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 185/387 (47%), Gaps = 17/387 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
++ D TF ++ L R SE ++++ + C P++ + VN
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ---------PDLV-TYGIVVNGL 231
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K ++ LA ++K+ G+ P V IYN +I+ + + AL + M ++
Sbjct: 232 CKRGDID---LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+VVT+N LI C ++ A L +M E+ NPNVV+F+ LI F E K E +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI+ + T L++G C R+ +A + + P Y L++ C
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ E+ ++G + + + TTLI G + R+ A + ++M+ +G+LPD +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
++ LL+ LC+ G+ A + ++PD TY+I++ G + + ++G +L +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQ 489
+G P++ TY + M G RK +++
Sbjct: 529 LKGVKPNVVTYTTMMSGF--CRKGLKE 553
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 144/275 (52%), Gaps = 4/275 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++AFVK ++ + ++ M ++ ID P + Y+ LINGF D+A ++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+VVT+N LI GFC+ K+ D + LFREM ++G N V++ TLI GFF R+
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ G +T IL+DGLCN G+V A + R + P + Y
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E +C G ++ L KG P+V+ TT++ G R EA L +M +EG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 396 ILPDSVTFNCLLE-DLCDVGRTVDADRLRLLASTK 429
LPDS T+N L+ L D + A+ +R + S +
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 152/302 (50%), Gaps = 10/302 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL-- 305
F M K C PNVV++NTLI+GF ++ DEG+ + EM + G ++VT L+ G
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 306 ---CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
C+ +++ ++V D GVLP Y L++ LC G AL V + L +
Sbjct: 444 ARECDNAQIVFK-QMVSD----GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P + +IEG+ + K + L + +G+ P+ VT+ ++ C G +AD L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+G PD TY+ L+ + R+ + L+ EM F+ D +T + L +
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
Query: 483 AR 484
R
Sbjct: 619 GR 620
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL P + N L+NGF A+ +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD TFN LI G R+ + A+ L M KGC P++V++ ++ G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++D LCN V A L + +G+ P Y L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L+ G+ + R EG
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM G + + TY + + G AR+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARE 446
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 146/290 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+G + + +MVR+ V PD TFNILI C+ + A G+ M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P++V++N L+ G+ E + M++ G E + +L+DG C V
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + ++P Y L++ LC G +++DE+ P V+ LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + + +EA G++ M+K+G+ P+ VT+N +++ C A + GL+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
PD + Y++L++GY + E L EM + IPD+A+YNS +DGL N
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 154/315 (48%), Gaps = 1/315 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D + F M ++ P+ S+++ L+ V+ + A+ + ++ + P + TF
Sbjct: 36 VDDAVTCFNRMVRVFPPPPT-SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ + A L + + G PN+V+FNT+I GF + ++ ++
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G F T L++GL G++ A L+ + + V P Y L++ LC +G A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + ++ ++G L + +LI+G + + E + L+ KM++E + PD TFN L++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC GR ++A + + S +G PD +TY+ L+ GY E L N M+ G PD
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 470 LATYNSYMDGLSNAR 484
+ YN +DG +
Sbjct: 335 VLNYNVLIDGYCKTK 349
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 148/288 (51%), Gaps = 1/288 (0%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
R D A+ ++RMVR P F+ L+ R + A+ LF +++ KG +P++ +F
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
LI +F + ++ +++ G + + VT +++G C G + KA + +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G L F Y L+ L G AL ++ E+ K P+++ + LI+GL + +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL ++ + GIL D+VT+N L++ C VGR + +L + +DPD T++IL+
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+E R E + ++ M G PD+ TYN+ M+G +R++V + R
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC-SRENVHEAR 320
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ + +LIN + A +++ +P++VTFN +I+GFC N AL
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + +G + ++ TLI G + +++ EM + + + V L+DGLC
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V A L RG+L Y L++ C G +++ ++ ++ P
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ L + + +EA G++ M K G PD VT+N L+E C +A L
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL+PD + Y++L+ GY + E L E+ ++ +P +A+YNS +DGL N+ +
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ +N +INGF KAL F ++ D T+ LI+G +N + AL
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +EM + PN+V ++ LI G + + + + ++ E G +VT L+DG C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ GR + +L+ R V P D+ + L++ LC EG A V+ + K+G P ++
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L+EG EA L +M+K G+ PD + +N L++ C +A L
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K L P +Y+ L+ G R + L++EM PD+ TYN +D L
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 163/388 (42%), Gaps = 74/388 (19%)
Query: 157 FHFAVNAFVKANRM--NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++A K R+ G+LA + R +P + YN L+ G+ +A ++
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKR---GEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RMV+ ++PDV+ +N+LI G+C+ K D A+ LF+E+ K P + S+N+LI G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM VT IL+D LC EGR+L+A +++ ++GV P Y
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG---------------------------------- 360
+++ C N +A ++ + + K G
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 361 NL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD------- 412
NL P + + +LI+GL L + L+++M G PD +T+N LL+ C
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Query: 413 ---------------------VGRTVDADRLRLLAST------KGLDPDGMTYHILVSGY 445
V ++L++ G P+ TY IL++
Sbjct: 565 ISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATY 473
++ E L+++M D PD T+
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITF 652
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 36/299 (12%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YNVLI+G+ K + D+A+ + + + P + ++N LI G C + +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM P+VV++N LI D LC
Sbjct: 392 LLDEMHGSAQPPDVVTYNILI-----------------------------------DALC 416
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EGR+L+A +++ ++GV P Y +++ C N +A ++ + + K G P ++
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G + EA L ++M + ++PD ++N L++ LC++GR L
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G PD +TY+IL+ + + + +L +++ EG PD T ++ +D L K
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEK 594
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 22/315 (6%)
Query: 168 NRMNDGLLA---FEAMRKLIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N + DGL ++KL+D P V YN+LI+ K +ALG M++
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
VKP++VT+N ++ G+C ++A +F M + G P+++++N LI G+ DE
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM + L+DGLCN GR+ EL+ + G P Y L++
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 339 KLCGEG--NAGIAL--EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
C + I+L ++V+ +W P +++ L + K A ++ +L
Sbjct: 554 AFCKTQPFDKAISLFRQIVEGIW-----PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRK 452
G P+ T+ L+ LC G +A + LL+ + D PD +T+ I++ + N
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEA--MLLLSKMEDNDRPPDAITFEIIIGVLLQRNETD 666
Query: 453 EGENLVNEMLDEGFI 467
+ E L EM+ G +
Sbjct: 667 KAEKLREEMIARGLV 681
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++A K R+ + L M K +P++ YN +++G+ + A ++RM
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ ++PD++ +N+LI+G+C+ + D A+ LF+EMR K P++ S+N+LI G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM + G +T IL+D C KA L G+ P + +
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAI 585
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC +A + + L G P+V T LI L + EA L+ KM
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
PD++TF ++ L T A++LR +GL
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 39/207 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR--KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + K +++ ++ F+ MR LI P ++ YN LI+G D
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLI---PDIASYNSLIDGLCNLGRIPHVQELLD 534
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE--------------------- 253
M PDV+T+NIL+ FC+ + FD A+ LFR++ E
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594
Query: 254 -------------KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
GC+PNV ++ LI + F E + + +M + ++T EI
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVL 327
++ L KA +L + RG++
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 188/408 (46%), Gaps = 74/408 (18%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
C F + +F K ++ DG FE M L +G P YN+LI+G+ K D+
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQM--LDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A Y+ MV ++P + T+N L++ FC+ K A+ LF+ M EKG P+VV+++T+I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 269 GFFGERKFDEGVNMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G K E + M + +MIE GC ++V L++GLC + + +A +L+ + + +G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 328 PKD----------------------FD-------------YFGLVEKLCGEGNAGIALEV 352
P + FD Y GL++ L EG A+++
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 353 VDELWKKGNLPSVIACTTLIEGLRR---------LRKGVEASG----------------- 386
++ KG +P + +++ GL R + K + ASG
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 387 ---------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
++E+M K G +PD VT+N LL+ LC A L G PD ++
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y ++++G + N+ + L + M++ +PD+ T+N MDGL A K
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 145/282 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +++G + + +A F+D M PDVV +N L+ + K D A+ L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+++ KG P+ V++N+++ G + DE M +M+ GC + T I++ G C
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+V A +++ + S+ G +P Y L++ LC A E+ + G P +++
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ ++ GL + K +A L ++M++ ++PD VTFN L++ LC G+ +A L +
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G PD + Y+ L++G ++ R + + L M ++GF+ D
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LING K ++A + M PD +T+N ++SG CR K A F M
Sbjct: 152 YNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP 211
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G +P+VV++N L+ + E K DE + + ++I G +VT ++ GL + +
Sbjct: 212 SRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 271
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A E+ G P Y ++ C A +V++E+ K G +P V+ L+
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + +A L M+ G PD V+++ +L LC + DA L + L
Sbjct: 332 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 391
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
PD +T++IL+ G + + E ++L+++M G PD YN+ M+GL + ++ R
Sbjct: 392 PDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
MRE C+PN +F +++ F + K +G + +M++ G + IL+DG +GR
Sbjct: 1 MRE--CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGR 58
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L + G+ P + Y L+ C E A+E+ + +KG P V+ +T
Sbjct: 59 VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYST 118
Query: 371 LIEGLRRLRKGVEA-SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+I GL + K EA L KM++ G ++V +N L+ LC A +L ++K
Sbjct: 119 IISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK 178
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +TY+ ++SG R + E + + M G+ PD+ YN +D L K+
Sbjct: 179 GYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+ LA E + + A+ C N +S ++ +A
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCA-PNGATYS---------IVLSGHCRA 302
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+++D E M K I P V YN+L++G K DKA + MV + PD+V+
Sbjct: 303 KKVDDAHKVLEEMSK-IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++++++G C+ K A LF M E+ P+VV+FN L+ G K DE ++ +M
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
GC V L++GL +GR ++A L +G L F
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 190/389 (48%), Gaps = 14/389 (3%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+F A + SF+ +T ++ S A+S F + +L+ I N I +E
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-----NRVI-----IE 112
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R F A+ KA+ + + F M + SV +N ++N + + + L FYD
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYD 172
Query: 215 RMVRDR----VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+V + P+ ++FN++I C+ + D A+ +FR M E+ C P+ ++ TL+ G
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E + DE V + EM GC S V +L+DGLC +G + + +LV + +G +P +
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC +G A+ +++ + +P+ + TLI GL + R+ +A L+
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G + ++ L+ L G+ +A L + KG P+ + Y +LV G RE +
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
E + ++N M+ G +P+ TY+S M G
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKG 441
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 185/394 (46%), Gaps = 28/394 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-------DGIFSCPEMERIFHFA 160
D T+ ++ L R E +L+ + + C S DG+ ++ R+
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV 280
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
N F+K P+ YN LI+G + DKA+ +RMV +
Sbjct: 281 DNMFLKG------------------CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VT+ LI+G + ++ A+ L M E+G + N ++ LI G F E K +E +
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M E GC+ + V +LVDGLC EG+ +A E++ G LP + Y L++
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G A++V E+ K G + + LI+GL + + EA + KML GI PD+
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 401 VTFNCLLEDLCDVGRTVDADRL---RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
V ++ +++ LC +G A +L L PD +TY+IL+ G + +L
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+N MLD G PD+ T N++++ LS S + R
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + A K ++ + F M RK + P Y L++G K D+A+ D
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCL---PDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P V +N+LI G C+ L M KGC PN V++NTLI G +
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ V++ M+ C + VT L++GL + R A L+ RG Y
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A A+ + ++ +KG P+++ + L++GL R K EA ++ +M+
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LP++ T++ L++ G +A ++ G + Y +L+ G R KE
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ML G PD Y+S + GL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T + +I + + FD L +R + SF + R + D+ V++ + M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 287 I-ELGCEFSSVTCEILVDGLCNEG---RVLKACELVIDFSRR-GVLPKDFDYFGLVEKLC 341
+ E C+ S + +++ + NEG R L+ + V++ + + P + +++ LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A+EV + ++ LP TL++GL + + EA L+++M EG P V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N L++ LC G +L KG P+ +TY+ L+ G + + + +L+ M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ IP+ TY + ++GL R++ R
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 21/212 (9%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C + + ++ R+ + ++ + M I +P Y+ +I G D A
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT-IGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 210 LGFYDRMV---RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
L Y M+ + +PDVVT+NIL+ G C K A+ L M ++GC+P+V++ NT
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ E N C+ E LV L RV AC +V + +
Sbjct: 582 L------NTLSEKSN--------SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYL 627
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
PK + +V ++C A +D+ W+
Sbjct: 628 APKTSTWAMIVREICKPKKINAA---IDKCWR 656
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 166/325 (51%), Gaps = 9/325 (2%)
Query: 165 VKANRMNDGLL-------AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDR 215
V N + DGL AF+ ++ + R P+V Y LI GF + DKA G +
Sbjct: 190 VMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNE 249
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV V P+V TFN L+ G C+ K A L M ++G P+V ++N L+ G+F ++
Sbjct: 250 MVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKE 309
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ N+ M ++G + +++ GL + +A +L V+P Y
Sbjct: 310 AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSS 369
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC G AL+ VDE+ +G P+VI T+LI+ L + + +A L++K+ +G
Sbjct: 370 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 429
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I + T+N L++ LC GR DA ++ KG + D +TY I+++G +E+ E
Sbjct: 430 IQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEAL 489
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L+++M D+G +PD Y + ++
Sbjct: 490 TLLSKMEDKGCVPDAIAYETIINAF 514
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 145/288 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K + AL ++ + +PDVV +N +I G C++K A L+ EM
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF 216
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
EK PNVV++ +LI GF + D+ + EM+ + T LVDGLC EG++
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A LV + GV P F Y L++ AG A V + + + G V + + +I
Sbjct: 277 EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL +++ EA L E M E ++PD V ++ L++ LC GR A + +G
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP 396
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ +TY L+ + ++ + L+ ++ D+G ++ TYN +DGL
Sbjct: 397 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 444
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 158/315 (50%), Gaps = 1/315 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ND + +F M ++ P + + ++ VK + + + + RM ++ + +T N
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIK-FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ +C ++ + A +F ++ + G P+++++ TLIRG + E +N ++
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + V+ L++GLC G+ A L+ P Y +++ LC + A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ E+++K P+V+ T+LI G + + +A GL+ +M+ + + P+ TFN L++
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G+ +A L + +G+ PD TY+ L+ GY + +N+ N M G D
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328
Query: 470 LATYNSYMDGLSNAR 484
+ +Y+ + GLS +
Sbjct: 329 VHSYSVMISGLSKMK 343
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 4/308 (1%)
Query: 176 AFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A +RK I+G RP V +YN +I+G K + A Y M RV P+VVT+ LI
Sbjct: 173 ALRLLRK-IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC + D A GL EM K NPNV +FNTL+ G E K E ++ M++ G
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
T L+DG KA + ++ GV Y ++ L A+++
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ + + +P V+A ++LI+GL + + A +++M G P+ +T+ L++ LC
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L +G+ + TY+ILV G ++ R + + + ++L +G D+ T
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVT 471
Query: 473 YNSYMDGL 480
Y+ ++GL
Sbjct: 472 YSIMINGL 479
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N++ ++N F + KL +P + Y LI G + ++L F+DR+V
Sbjct: 91 INSYCHLRQINSAFSVFAKILKL-GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K D V++ LI+G C+ + AL L R++ + C P+VV +NT+I G ++ +
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EM E + VT L+ G C G++ KA L+ + + V P + LV+ L
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG A +V + K+G P V L++G +++ +A + M + G+ D
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+++ ++ L + +A L + + PD + Y L+ G + R V+E
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M D G P++ TY S +D L + +
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQ 414
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ V+ K +M + M K G P V YN L++G+ +E KA ++ M
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGVG-PDVFTYNALMDGYFLVKEAGKAKNVFNIM 320
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V DV +++++ISG + K D A+ LF MR + P+VV++++LI G +
Sbjct: 321 AQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRI 380
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM + G + +T L+D LC +V KA L+ +G+ + Y L
Sbjct: 381 NSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL 440
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC +G A +V +L KG+ V+ + +I GL + EA L+ KM +G
Sbjct: 441 VDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGC 500
Query: 397 LPDSVTFNCLL 407
+PD++ + ++
Sbjct: 501 VPDAIAYETII 511
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V Y+V+I+G K + D+A+ ++ M + V PDVV ++ LI G C++ + + AL
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM ++G PNV+++ +LI + D+ + + ++ + G + + T ILVDGLC +G
Sbjct: 389 EMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
R+ A ++ D +G Y ++ LC E AL ++ ++ KG +P IA
Sbjct: 449 RLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYE 508
Query: 370 TLIEGLRRLRKGVEASGLMEKML 392
T+I +A L+ +M+
Sbjct: 509 TIINAFFEKDMNDKAEKLLREMI 531
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+ A+ ++RM+R R P ++ F ++ + K + + + LF+ M G N ++ N
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI + R+ +N A+ SV +IL + G
Sbjct: 90 LINSYCHLRQ----INSAF----------SVFAKIL---------------------KLG 114
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y L+ LC G +L D L +G ++ TLI GL ++ + A
Sbjct: 115 YQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPAL 174
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+ K+ E PD V +N +++ LC DA L K + P+ +TY L+ G+
Sbjct: 175 RLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGF 234
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + L+NEM+ + P++ T+N+ +DGL K
Sbjct: 235 CIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGK 274
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 6/330 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+R + + R+ L F+A +L +P V Y LING K D A +
Sbjct: 10 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 69
Query: 214 DRMVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+MV +P+ T+N L+ G C+ + D A + E R++ P+VV++NTL+ F
Sbjct: 70 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQ 129
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ DE + +M E G + V+ ++ GLC R+ A E+ + R P
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +++ LC A +++D + +G P ++A T L+ G + A GL+ +M+
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRR 451
+G +PD VT+ +++ LC VGR DA + R L + K P+ +TY L+ GY R +R
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK-CSPNVVTYSALIGGYCRASRV 308
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
EG ++ EM P++ TYN+ + GLS
Sbjct: 309 DEGGKVMREM---ACRPNVVTYNTMIWGLS 335
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKA---------------------------CEL----- 317
G + + T I++ GLC GRV +A C+L
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 318 VIDFSRR-----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
D R+ G P F Y LV+ LC + A V+ E K+ P V+ TL+
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L +L + EA +M +EG +P V+FN ++ LC R DA + +
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY +++ G + ++ E + L++ M+ EG PDL Y + G S A
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAA 235
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ ++ L S + E +L+ + + C P++ + V F
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCR---------PDLV-AYTPLVLGF 232
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A R++ A +R+++ P V Y V+I+ K D A + +V ++
Sbjct: 233 SAAGRLDS---ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 289
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+VVT++ LI G+CR + D + REM C PNVV++NT+I G + +E M
Sbjct: 290 PNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGM 346
Query: 283 AYEMIELG 290
EM E G
Sbjct: 347 FREMSECG 354
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ K R++D A E R+L+ + P+V Y+ LI G+ + D+
Sbjct: 260 YTVVIDKLCKVGRVDD---AHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMR 316
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M +P+VVT+N +I G + + A G+FREM E G P+ ++ L R
Sbjct: 317 EMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 188/401 (46%), Gaps = 17/401 (4%)
Query: 80 SKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANP 139
+KL + P H F + +SF+H T+ +++ L + +L +
Sbjct: 45 NKLKNEPNIL-LALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEG 103
Query: 140 CPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLING 199
C+ D +F +NA+ +A L F + + +PSV IYN +++
Sbjct: 104 ISCNED----------LFVIVINAYRRAGLAEQALKTFYRIGEF-GCKPSVKIYNHVLDA 152
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
+ +F G Y+ M RD ++ +V T+N+L+ C+N + D A L EM KGC P+
Sbjct: 153 LLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPD 212
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VS+ T++ K +E ++ + +++ L++G C E ++ + EL
Sbjct: 213 AVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNA-----LINGFCREHKMEEVFELFN 267
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ + G+ P Y ++ L GN +AL V+ +++ +G P+V T+L++G
Sbjct: 268 EMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGG 327
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA L +M++EG P++V +N L+ LC G+ V+A + G+ P+ TY
Sbjct: 328 RLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYS 387
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ G+ + + N+M+ G +P++ Y +D L
Sbjct: 388 TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVL 428
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 155/294 (52%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V +YN LINGF + + ++ ++ M + + PDV+T++ +I+ ++AL +
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M +GC+PNV +F +L++G+F + E +++ MI+ G E ++V L+ GLC+ G
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYG 362
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++++A + R GV P + Y L++ G+ A E+ +++ G LP+V+ T
Sbjct: 363 KMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYT 422
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+++ L R A L+E M P+++TFN ++ LC G+T A ++
Sbjct: 423 CMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQY 482
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G P+ TY+ ++ G R +E +V E+ + +L TYN+ + G +A
Sbjct: 483 GCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHA 536
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALG 211
E + ++ F KA D + A E K+I P+V +Y +++ + F+ AL
Sbjct: 383 ETTYSTLIDGFAKAG---DLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALH 439
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M P+ +TFN I G C + K + A+ + +MR+ GC PNV ++N ++ G F
Sbjct: 440 LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLF 499
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
++ E + + E+ E+ + + VT ++ G C+ G A ++ G P
Sbjct: 500 NAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSI 559
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y ++ C +G A+++VD L KKG P V T+L+ G+ EA ++K
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDK 619
Query: 391 MLKEGILPDSVTFNCLLEDL 410
M+ EGI P+ T+N L+ L
Sbjct: 620 MINEGICPNRATWNALVRGL 639
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 142/299 (47%), Gaps = 7/299 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V + L+ G+ +AL ++RM+++ +P+ V +N LI G C K A+ +
Sbjct: 311 PNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSV 370
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M G PN +++TLI GF + +MI GC + V +VD LC
Sbjct: 371 SQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCR 430
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A L+ + + P + ++ LC G A++V++++ + G P+V
Sbjct: 431 NSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTT 490
Query: 368 CTTLIEGL---RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+++GL +R R+ ++ G +E+M I + VT+N +L C G A ++
Sbjct: 491 YNEVLDGLFNAKRTREALQIVGEIEEM---EIKSNLVTYNTILSGFCHAGMFKGALQIAG 547
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG-FIPDLATYNSYMDGLSN 482
G PD +TY+ ++ Y ++ K LV+ + +G PD+ TY S + G+ N
Sbjct: 548 KLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCN 606
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ +N F + ++M + F M ++G P V Y+ +IN + + AL
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMA--VEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M P+V TF L+ G+ + AL L+ M ++G PN V++NTLI G
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYG 362
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E V+++ +M G + T L+DG G ++ A E+ G LP Y
Sbjct: 363 KMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYT 422
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V+ LC AL +++ + P+ I T I+GL K A ++ +M +
Sbjct: 423 CMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQY 482
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P+ T+N +L+ L + RT +A ++ + + +TY+ ++SG+ K
Sbjct: 483 GCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGA 542
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ ++L G PD TYN+
Sbjct: 543 LQIAGKLLVGGTKPDSITYNT 563
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 131/298 (43%), Gaps = 9/298 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +I R+ D M + + + F I+I+ + R + AL F +
Sbjct: 76 YTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIG 135
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E GC P+V +N ++ E KF + M G E + T +L+ LC RV
Sbjct: 136 EFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVD 195
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ + S +G +P Y +V +C G A E+ + K +P A LI
Sbjct: 196 AARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI--KSFVPVYNA---LI 250
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST--KG 430
G R K E L +M EGI PD +T++ ++ L ++G A L +LA +G
Sbjct: 251 NGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMA--LAVLAKMFLRG 308
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
P+ T+ L+ GY R E +L N M+ EG P+ YN+ + GL + K V
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILI 232
A + KL+ G +P YN +I + K E A+ DR+ + PDV T+ L+
Sbjct: 542 ALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLL 601
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
G C D A+ +M +G PN ++N L+RG F +
Sbjct: 602 WGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSK 642
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 151/293 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P +N LING + +A+G ++ MV +P+V+++N +I+G C+N +A+
Sbjct: 163 QPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVR 222
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+FR+M + PNVV++NT+I +R +E V EM++ G VT ++ G C
Sbjct: 223 VFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFC 282
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G++ +A L + R V+P + LV+ LC EG A V + + +KG P+
Sbjct: 283 SLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAY 342
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++G + EA ++ M+ +G P+ ++N L+ C R +A RL
Sbjct: 343 TYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEM 402
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
S K L PD +TY L+ G + R +E NL EM G +PDL Y+ +DG
Sbjct: 403 SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDG 455
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 170/330 (51%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N ++ + + F M + G P+V YN +ING K A+ + +
Sbjct: 169 FNTLINGLCNEGKIKEAVGLFNEM--VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRK 226
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++R KP+VVT+N +I C+++ + A+ EM ++G P+VV++NT++ GF +
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + EM+ +VT ILVDGLC EG V +A + + +G P + Y
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C A++V+ + KG P++ + LI G + ++ EA L+ +M ++
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD+VT++ L++ LC VGR +A L + GL PD M Y IL+ G+ + E
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM + P++ Y + G+ A K
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGK 496
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 164/316 (51%), Gaps = 1/316 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D L +F M ++ + RPSV + + K +++ A+ ++M V +V + N
Sbjct: 77 IDDALTSFYRMVRM-NPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+LI+ CR D A+ + +M + G P+ ++FNTLI G E K E V + EM+
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E + ++ +++GLC G + A + + P Y +++ LC + A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+E + E+ +G P V+ T++ G L + EA+ L ++M+ ++PD+VTFN L++
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G +A + + KG +P+ TY+ L+ GY N+ E ++ M+ +G P+
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Query: 470 LATYNSYMDGLSNARK 485
L++YN ++G +++
Sbjct: 376 LSSYNILINGYCKSKR 391
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + +++D P V YN +++GF + ++A + MV V PD VTFNIL+
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C+ A + M EKG PN ++N L+ G+ + DE + + MI GC
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ + IL++G C R+ +A L+ + S + + P Y L++ LC G AL +
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ G LP ++A + L++G + EA L+++M + I P+ + + L+ +
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ A L S G+ PD TY++++ G +E E +M D+GF+PD +Y
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554
Query: 474 NSYMDGLSNARKS 486
N + G + S
Sbjct: 555 NVIIQGFLQNQDS 567
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 7/325 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++ ++ F ++N+ F+ M GR P +N+L++G K +A
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMV----GRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M +P+ T+N L+ G+C + + D A+ + M KGC PN+ S+N LI G+
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ +E + EM E +VT L+ GLC GR +A L + G+LP Y
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C G+ AL+++ E+ ++ P++I T LI G+ K A L K+
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA 509
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI PD T+N +++ L G + +A G PD +Y++++ G+ +
Sbjct: 510 DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSST 569
Query: 454 GENLVNEMLDEGFIPDLATYNSYMD 478
L++EM+ + F D +T+ +D
Sbjct: 570 AIQLIDEMVGKRFSADSSTFQMLLD 594
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 41/263 (15%)
Query: 234 GFCRNKKFDL----ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
GF N D+ AL F M P+VV F + ++++ V++ +M
Sbjct: 66 GFGSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLF 125
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + + +L++ LC V DF A
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHV------------------DF-----------------A 150
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ V+ +++K G P I TLI GL K EA GL +M+ G P+ +++N ++
Sbjct: 151 VSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210
Query: 410 LCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G T+ A R+ R + +G P+ +TY+ ++ ++ E ++EM+D G P
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRG-KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 469 DLATYNSYMDGLSNARKSVRQTR 491
D+ TYN+ + G + + TR
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATR 292
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 167/335 (49%), Gaps = 1/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A V+ + D +++ +L P+ N+LIN F + D ++
Sbjct: 93 FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ ++P ++TF LI+G C+ +F AL LF +M +GC P+V ++ T+I G +
Sbjct: 153 IKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGET 212
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +M E+GC+ VT L+D LC + V +A ++ +G+ P Y L
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC A +++E+ +P ++ + LI+ + +EA G+++ M + G+
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ +T+N L+ V+A +L + T+G PD +Y IL++GY R E +
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L NEM+ +G P+ +Y + + K +R+ R
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGK-LREAR 426
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L F + K+I +P++ + LING K EF +AL +D MV +PDV T+ +I
Sbjct: 144 LGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTII 203
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ + A GL ++M E GC P+VV+++TLI +R +E +++ M G
Sbjct: 204 NGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ V+ L+ GLC+ R +A ++ + + ++P + L++ C EGN A V
Sbjct: 264 PTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGV 323
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ + + G P+VI +L+ G + VEA L + M+ G PD +++ L+ C
Sbjct: 324 LKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCM 383
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
V R +A +L +GL P+ ++Y L+ + + + +E L +M G++PDL T
Sbjct: 384 VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCT 443
Query: 473 YNSYMDG 479
Y+ ++G
Sbjct: 444 YSVLLEG 450
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 152/359 (42%), Gaps = 36/359 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N KA L F+ M +P V Y +ING K E A G +M
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVAR-GCQPDVYTYTTIINGLCKMGETAAAAGLIKKM 222
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDVVT++ LI C+++ + AL +F M+ KG +P VVS+ +LI+G ++
Sbjct: 223 GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW 282
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL------------VIDFSR- 323
E M EM L VT +L+D C EG VL+A + VI ++
Sbjct: 283 KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342
Query: 324 ----------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
RG P F Y L+ C A ++ +E+ +G
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+ ++ TTLI +L K EA L + M G LPD T++ LLE C G A R
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L L P+ + Y IL+ + L +E+ G PD+ Y + ++GL
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGL 521
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 1/331 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K +N+ L F M K P+V Y LI G + +A + M
Sbjct: 238 IDSLCKDRLVNEALDIFSYM-KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD+VTF++LI FC+ A G+ + M E G PNV+++N+L+ G+ + + E
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI GC+ + IL++G C R+ +A +L + +G+ P Y L+
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A E+ ++ G LP + + L+EG + +A L M + P+
Sbjct: 417 CQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNL 476
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V + L++ +C G A +L GL PD Y +++G +E E +
Sbjct: 477 VMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRK 536
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
M ++G P+ +YN + G + R +
Sbjct: 537 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 567
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +++LI+ F K +A G M V+P+V+T+N L+ G+ + A L
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M +GC P+V S++ LI G+ ++ DE + EMI G ++V+ L+ C
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A EL D G LP Y L+E C +G G A + + P+++
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVM 478
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ + + A L ++ G+ PD + ++ LC G +A
Sbjct: 479 YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKME 538
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G P+ +Y++++ G+ + L+ EM D+GF+ D T
Sbjct: 539 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 48/329 (14%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
++ +++ L S R+ E ++LN S N P D + F ++ F K
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP---DIV--------TFSLLIDIFCKEG 315
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ + + M ++ P+V YN L++G+ E +A +D M+ KPDV ++
Sbjct: 316 NVLEAQGVLKTMTEM-GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSY 374
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ILI+G+C K+ D A LF EM +G PN VS+ TLI F K E + +M
Sbjct: 375 SILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHT 434
Query: 289 LG-----CEFSS------------------------------VTCEILVDGLCNEGRVLK 313
G C +S V IL+D +C G +
Sbjct: 435 NGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNH 494
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A +L + G+ P Y ++ LC EG ALE ++ + G P+ + +I
Sbjct: 495 ARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIR 554
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G + + A L+ +M +G + D T
Sbjct: 555 GFLQHKDESRAVQLIGEMRDKGFVADEGT 583
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 203/431 (47%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + FSE S+L + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P V++
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D+ + EM+
Sbjct: 181 NTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++D++ +KG P I TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL+PD TY ++++ + ++ +G L+ EM +G +P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PS ++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ L + DAD L KGL P+G+T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGL 292
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 185/393 (47%), Gaps = 12/393 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA +RHD + ++ L+ + +L ++ GI PE
Sbjct: 184 FYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRR-------GIERSPEA-- 234
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + + ++ +A + + L M+K P +SI N I VK + +KAL F +R
Sbjct: 235 -FSYVMVSYSRAGMLRNALRILTLMQK-AGVEPDLSICNTAIYVLVKGNKLEKALRFLER 292
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++PD+V++N LI G+C + D AL L EM KGC P+ VS+ T++ +RK
Sbjct: 293 MKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRK 352
Query: 276 FDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + M++ VT L+ L G A + + +G Y
Sbjct: 353 VEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYS 412
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V+ C N A +V +++ KG P V+ T +I+G R+ K EA ++++M K
Sbjct: 413 AVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH 472
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++VT+ LL LC G++++A + ++ P+ +TY ++ G RE + E
Sbjct: 473 GCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+L EM+++GF+P+ N + L + V
Sbjct: 533 CDLTREMIEKGFLPNPVDINLLIQSLCRNQNVV 565
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 154/327 (47%), Gaps = 2/327 (0%)
Query: 150 CPEMERIFHFAVNAFV-KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
CP +++ ++ V AF+ K ++ + E M + + P YN LI K D
Sbjct: 333 CPP-DKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADD 391
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL F D V ++ ++ FC+NK D A L +M KGCNP+VV++ +I
Sbjct: 392 ALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIID 451
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
GF K DE M +M + GC+ ++VT +L++GLC+ G+ L+A E++ P
Sbjct: 452 GFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTP 511
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y ++ L EG A ++ E+ +KG LP+ + LI+ L R + V A +
Sbjct: 512 NAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYL 571
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E+ L +G + V F ++ C +G A + PD +TY L ++
Sbjct: 572 EECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKK 631
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNS 475
+R E L+ +ML +G P TY +
Sbjct: 632 SRLDEASELIVKMLGKGIDPTPVTYRA 658
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 2/275 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +I+GF + + D+A +M + KP+ VT+ +L++G C N K A +
Sbjct: 441 PDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREM 500
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E PN ++++ ++ G E K E ++ EMIE G + V +L+ LC
Sbjct: 501 INVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCR 560
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V+ A + + + +G ++ ++ C G+ AL ++++++ P I
Sbjct: 561 NQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAIT 620
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL + L + + EAS L+ KML +GI P VT+ ++ C GR VD D ++LL
Sbjct: 621 YTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGR-VD-DMMKLLEK 678
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
P Y+ ++ R+E E L+ ++L
Sbjct: 679 MIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVL 713
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 153/361 (42%), Gaps = 37/361 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL----- 210
I + A+ VK N++ L E M K+ P + YN LI G+ D AL
Sbjct: 269 ICNTAIYVLVKGNKLEKALRFLERM-KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAE 327
Query: 211 -----------GFYDRMV---RDR-----------------VKPDVVTFNILISGFCRNK 239
+Y M +DR + PD VT+N LI ++
Sbjct: 328 MPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHG 387
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL RE EKG + + V ++ ++ F + D+ ++ +M GC VT
Sbjct: 388 HADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYT 447
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++DG C G++ +A +++ + G P Y L+ LC G + A E+++ +
Sbjct: 448 AIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEH 507
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
P+ I + ++ GLRR K EA L +M+++G LP+ V N L++ LC V A
Sbjct: 508 WWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGA 567
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ KG + + + ++ G+ + +++ +M PD TY + D
Sbjct: 568 KKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDA 627
Query: 480 L 480
L
Sbjct: 628 L 628
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 2/204 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ +I GF + + D AL + M PD +T+ L + + D A L +M
Sbjct: 586 FTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKML 645
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +P V++ +I F + D+ + + +MI F +V ++ ++ LC G
Sbjct: 646 GKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ-PFKTVYNQV-IEKLCYFGNRE 703
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L+ R L+E +GNA A +V +++++ +P + C +
Sbjct: 704 EAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVT 763
Query: 373 EGLRRLRKGVEASGLMEKMLKEGI 396
+ L EA LM + ++ GI
Sbjct: 764 KKLVLDGMPAEADDLMLRFVERGI 787
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 7/174 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F + ++ L E M L + P Y L + K D+A +M
Sbjct: 586 FTSVIYGFCQIGDLDAALSMLEDMY-LSNKHPDAITYTTLFDALGKKSRLDEASELIVKM 644
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG--FFGER 274
+ + P VT+ +I FC+ + D + L +M + P +N +I +FG R
Sbjct: 645 LGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNR 702
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+E + +++ + + TC IL++ +G L A ++ RR ++P
Sbjct: 703 --EEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIP 754
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 189/399 (47%), Gaps = 24/399 (6%)
Query: 110 TTFLFIVRSLASSYRFSELHSVL---NFISANPCPCSN----DGIFSCPEMERIFHFAVN 162
T++ I+ SL + E H +L +F S+ P S DG E+++ +
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318
Query: 163 AFVKA---NRM--NDGLL-------AFEA---MRKLIDGR--PSVSIYNVLINGFVKCRE 205
+K NR N +L +FEA +R+++ + P +Y LI+GF K
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A ++D M+ ++ PD +T+ LI GF + K LF EM +G P+ V++ T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI + + ++ EM+++G + VT L+DGLC G + A EL+ + ++G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ Y +V +C GN A++++ E+ G P I TT+I+ RL +A
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+++ML G+ P VTFN L+ C +G D DRL KG+ PD +TY+ L+ +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
N + M ++G PD TYN + G AR
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y LI+ + K E A ++ MV+ + P++VT+ LI G C++ + D A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EMR+KG NV +N+++ G ++ + + EM G + ++T ++D C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + KA +L+ + RG+ P + L+ C G ++ + +KG +P I
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TL++ + + ++M +G+ PDS T+N L++ C +A L
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
KG P +Y+ L+ + ++ + E L EM G + D YN ++D
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + ++NI+I CR K A L +M + P+VVS++T+I G+ + + +
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M G + + T ++ LC G+ +A +++ + + ++P + Y L+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G+ A + DE+ K P I TTLI+G + K +E L +M+ G+ PD
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L++ C G V+A L G+ P+ +TY L+ G + L++E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M +G ++ YNS ++G+ A
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKA 516
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + KA M + M ++ P++ Y LI+G K E D A D M +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++ +V +N +++G C+ + A+ L +EM G +P+ +++ T+I + D+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM++ G + + VT +L++G C G + L+ +G++P Y L+++
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + ++ + +G P LI+G + R EA L ++M+++G +P
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++N L++ + ++A L GL DG Y+ V E + NL +E
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738
Query: 461 MLDE 464
+++
Sbjct: 739 AIEK 742
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 4/266 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+ + F+I A L ++ G V S N + EG+ M
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANN---SEGIEM 244
Query: 283 AYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
A ++ E G +++ + I++ LC G+V +A L++ R P Y +++ C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G AL+++D++ KG P+ ++I L ++ K EA ++ +M+ + I+PD+V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ L+ +G A++ +K + PD +TY L+ G+ + + E +NL +EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSV 487
+ G PD TY + +D A + V
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMV 450
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 168/333 (50%), Gaps = 18/333 (5%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-------PSVSIYNVLINGFV 201
SC F + ++N++ E RKL+ GR P +IYN LI+G+
Sbjct: 37 SCQPDAFTFAILLRGLCRSNQL-------EKARKLL-GRMKEMGCVPDDAIYNALISGYS 88
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
K ++F +A F MV++ P VVT+ ++ G C+ ++ A+ L EMR+KGC+PN+
Sbjct: 89 KAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIY 148
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++N ++ G ERK DE M EM G VT + GLC RV +A +
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---L 205
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+R V P Y ++ LC G+ A ++D + +G P V+ ++LI+G + +
Sbjct: 206 ARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEV 265
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A GL++ MLK G P+ V +N LL L +G A+ + + +G PD ++Y+
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 325
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ G + R K+ + + + M++ G P+ ++Y+
Sbjct: 326 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 3/292 (1%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN L+ + DKA + M+ +PD TF IL+ G CR+ + + A L
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M+E GC P+ +N LI G+ + F + EM++ C + VT +VDGLC
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
R A +L+ + +G P + Y +VE LC E A ++++E+ +G P V+
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+ I+GL + + EA + +M + PD V++ ++ LC G A R+ S
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G PD +TY L+ G+ + + L++ ML G P++ YNS + L
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 15/310 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN I G KC D+A F RM V PDVV++ +I+G C++ D A +
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRM 236
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +GC P+VV++++LI GF + + + + M++LGC + V L+ L
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS--- 364
G + KA +++++ RRG P Y ++ LC A V D + ++G P+
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356
Query: 365 -------VIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL-PDSVTFNCLLEDLCDVGRT 416
++ T L++GL + + EA L K+L E I PD +N +L+ C +
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
A ++ K + +T++ILV G ++R + E ++ M+DEGFIPD TY +
Sbjct: 417 DKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475
Query: 477 MDGLSNARKS 486
+D + KS
Sbjct: 476 VDAMCKCGKS 485
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 13/316 (4%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +++ID +P + +L+ G + + +KA RM PD +N LIS
Sbjct: 26 ASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALIS 85
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+ + K F A EM + C P VV++ ++ G + + V + EM + GC
Sbjct: 86 GYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSP 145
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T ++V+GLC E ++ +A +++ + + RG P Y ++ LC + V
Sbjct: 146 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLC-------KCDRV 198
Query: 354 DE----LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
DE L + P V++ TT+I GL + AS +++ M G PD VT++ L++
Sbjct: 199 DEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDG 258
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G A L G P+ + Y+ L+ R + E+++ EM GF PD
Sbjct: 259 FCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD 318
Query: 470 LATYNSYMDGLSNARK 485
+ +YN+ +DGL A +
Sbjct: 319 VVSYNACIDGLCKAER 334
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 16/298 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ LI+GF K E ++A+G D M++ +P++V +N L+ R A +
Sbjct: 247 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 306
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC-----EFSSVTCEILV 302
EM +G P+VVS+N I G + + + M+E GC +S + +IL+
Sbjct: 307 LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILL 366
Query: 303 -----DGLCNEGRVLKACEL---VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
DGLC GR +AC L V+D + P F Y +++ C AL++
Sbjct: 367 YTVLLDGLCKGGRFDEACALFSKVLD--EKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 424
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ +K N +V+ L+ GL + +A ++ M+ EG +PD VT+ L++ +C G
Sbjct: 425 QMLEK-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 483
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
++ A L A G PD +TY L++G EN +E L ++++ ++PD T
Sbjct: 484 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 12/230 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP----------DVVTFNILISGFCR 237
P V YN I+G K KA +DRMV P D++ + +L+ G C+
Sbjct: 317 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCK 376
Query: 238 NKKFDLALGLFRE-MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+FD A LF + + EK C P+V +N ++ R+ D+ + + +M+E C + V
Sbjct: 377 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVV 435
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T ILV GLC + R+ A +++ G +P Y LV+ +C G + ALE+ +E
Sbjct: 436 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 495
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
K G +P V+ + LI GL EA L K+++ +PD T L
Sbjct: 496 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G NV ++N L+ E + D+ + EMI+ C+ + T IL+ GLC ++ KA
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+L+ G +P D Y L+ + G A + + E+ K LP+V+ T +++G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + + +A L+++M +G P+ T+N ++E LC+ + +A ++ + +G PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY+ + G + +R E + M PD+ +Y + ++GL +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKS 227
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ L R + +AS + ++M+ + PD+ TF LL LC + A +L G
Sbjct: 13 LLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG 72
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
PD Y+ L+SGY++ + + EM+ +P + TY + +DGL A ++
Sbjct: 73 CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 159/302 (52%), Gaps = 2/302 (0%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E + + + +P+V Y +L++GF K + D+A + M D +KP+ V FN LI
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
S FC+ + A+ +FREM KGC P+V +FN+LI G + + + +MI G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++VT L++ G + +A +LV + +G + Y L++ LC G A +
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++ + G+ PS I+C LI GL R EA ++M+ G PD VTFN L+ LC
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR D + +G+ PD +T++ L+S + + L++E +++GF+P+ T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 473 YN 474
++
Sbjct: 707 WS 708
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 152/325 (46%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ ++ FV R++D M P V YN LI G+ K AL
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M KP+V ++ IL+ GFC+ K D A + EM G PN V FN LI F E +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + EM GC+ T L+ GLC + A L+ D GV+ Y
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ G A ++V+E+ +G+ I +LI+GL R + +A L EKML++G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P +++ N L+ LC G +A + +G PD +T++ L++G R R ++G
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ EG PD T+N+ M L
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLAL 245
+P + I+N LI+GFV D A MV + PDV T+N LI G+ + LAL
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ +MR KGC PNV S+ L+ GF K DE N+ EM G + ++V L+
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C E R+ +A E+ + R+G P + + L+ LC AL ++ ++ +G + +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ TLI R + EA L+ +M+ +G D +T+N L++ LC G A L
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G P ++ +IL++G R +E EM+ G PD+ T+NS ++GL A
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 186/437 (42%), Gaps = 21/437 (4%)
Query: 40 PSVTLTPTAHHTH-LLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAW 98
P + T +A+ LL+ L + ++ITP L KL P +F+W
Sbjct: 46 PEIGGTDSANEWEKLLKPFDLDSLRNSFHKITPFQLY-----KLLELPLNVSTSMELFSW 100
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFH 158
+ + +RH + ++ L ++ F + +L ++GI E +F
Sbjct: 101 TGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLL-------IQMKDEGIVF---KESLFI 150
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + KA MR + P+ YNV++ V A + M+
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++ P + TF +++ FC + D AL L R+M + GC PN V + TLI + +E
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM +GC + T ++ GLC R+ +A ++V RG P D Y L+
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-GIL 397
LC G A ++ + K P ++ TLI G + +A ++ M+ GI+
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD T+N L+ G A + KG P+ +Y ILV G+ + + E N+
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 458 VNEMLDEGFIPDLATYN 474
+NEM +G P+ +N
Sbjct: 447 LNEMSADGLKPNTVGFN 463
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 331 FDYFGLVEKLCGEGNA-GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + +V ++ GN +A V ++ + P++ +++ + + A L+
Sbjct: 182 FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M K G +P+SV + L+ L R +A +L G PD T++ ++ G + +
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R E +VN ML GF PD TY M+GL
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N ++ + + + F+ L P + +N LING + + L + ++ +
Sbjct: 606 INGLCRSGMVEEAV-EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD VTFN L+S C+ A L E E G PN +++ L++ + D
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY LI+GF K A +D M + ++ PD +T+ +I G C+ + A L
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM K P+ V++ LI G+ E K E ++ +M+++G + VT L DGLC
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A EL+ + R+G+ + Y LV LC GN A++++ ++ G P +
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + R+ V A L+ +ML + P VTFN L+ C G D ++L
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ TY+ L+ Y N + + M +G +PD TYN + G AR
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 652
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 1/290 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN-KKFDLALGLFRE 250
++++ V+ D+A +D+M+ + V + N+ IS + +AL +F E
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
E G N S+N + + E + +M GC ++ +++G C G
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ + +L+ + +G+ P + Y G++ LC G A V+ E+ +G P + TT
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G +L A L ++M K I PD +T+ ++ LC GR ++AD+L K
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+PD +TY L+ GY +E + KE +L N+ML G P++ TY + DGL
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 154/320 (48%), Gaps = 3/320 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N + + + L E M+ I G +P+ YN +I K + +A
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQ--IKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + + PD V + LI GFC+ A LF EM+++ +P+ +++ +I G +
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + +EM+ E VT L+DG C EG++ +A L + G+ P Y
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L + LC G A E++ E+ +KG ++ +L+ GL + +A LM+ M G
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD+VT+ L++ C V A L + L P +T+++L++G+ ++GE
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Query: 456 NLVNEMLDEGFIPDLATYNS 475
L+ ML++G +P+ TYNS
Sbjct: 589 KLLKWMLEKGIMPNATTYNS 608
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN++ + + +A +M PDV++++ +I+G+C+ + L L EM+
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG PN ++N +I K E + EMI G V L+DG C G V
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L + +R + P Y ++ LC G A ++ E+ K P + T LI
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G + K EA L +ML+ G+ P+ VT+ L + LC G A+ L KGL+
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ TY+ LV+G + + L+ +M GF PD TY + MD +R+ VR
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 163/404 (40%), Gaps = 48/404 (11%)
Query: 111 TFLFIVRSLASSYRFSELHSVL-NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++ L + + +E VL IS P DG+ I+ ++ F K
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEGIAP---DGV--------IYTTLIDGFCKLGN 373
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++ F+ M+K P Y +I G + +A + MV R++PD VT+
Sbjct: 374 VSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 432
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI G+C+ K A L +M + G PN+V++ L G + D + +EM
Sbjct: 433 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 492
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E + T LV+GLC G + +A +L+ D G P Y L++ C A
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGL---------RRLRKGVEASGLM------------ 388
E++ ++ + P+V+ L+ G +L K + G+M
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612
Query: 389 --------------EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
M +G++PD T+N L++ C +A L KG +
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+Y+ L+ G+ + + E L +M EG + D YN + D
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 142/315 (45%), Gaps = 1/315 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + K +M + M ++ P++ Y L +G KC E D A M R
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++ ++ T+N L++G C+ D A+ L ++M G +P+ V++ TL+ + R+
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M++ + + VT +L++G C G + +L+ +G++P Y L+++
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C N E+ + KG +P LI+G + R EA L M+ +G
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 673
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++N L++ + ++A L +GL D Y+I E + + L +E
Sbjct: 674 SSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDE 733
Query: 461 MLDEGFIPDLATYNS 475
+++ + D+ T N+
Sbjct: 734 AIEKCLVGDIQTKNT 748
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 168/368 (45%), Gaps = 41/368 (11%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E ++ ++ KA +M+ L M+K P YNVLI+G K + + A F+
Sbjct: 161 EVVYSALIHGLCKARKMDCALEMLAQMKKAF-CTPDTITYNVLIDGLCKSGDVEAARAFF 219
Query: 214 DRMVRDRVKPDVVTFNILISGFC------------------------------------R 237
D M+ KPDV T+NILISGFC +
Sbjct: 220 DEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAK 279
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
NKK + A+ L ++ GC P + ++N L+ G + +E +++ ++++ GC VT
Sbjct: 280 NKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 339
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+DGL E R +A +L + + RG+ Y L+ +L G A V +
Sbjct: 340 YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 399
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G +P V+ +T+I+GL + + A + + M G+ P+ V ++ L+ LC R +
Sbjct: 400 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK-ARKM 458
Query: 418 DADRLRLLASTKG--LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
D L +LA K PD +TY+IL+ G + + +EML+ G PD+ TYN
Sbjct: 459 DC-ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 517
Query: 476 YMDGLSNA 483
+ G A
Sbjct: 518 LISGFCKA 525
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 146/335 (43%), Gaps = 36/335 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ YN L+NG K ++A+ ++V + PDVVT+ LI G + K+ A L
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+EM +G + V + LIR K + ++ M GC VT ++DGL
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A + RG+ P + Y L+ LC ALE++ ++ K P I
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR------ 421
LI+GL + A ++ML+ G PD T+N L+ C G T A
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQET 258
Query: 422 ---------------LRLLASTK---------------GLDPDGMTYHILVSGYTRENRR 451
+ LA K G P TY+ L++G + R
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+E +L+ +++D G PD+ TY S +DGL ++S
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 353
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 149/372 (40%), Gaps = 46/372 (12%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
H A +TI+ D T+ IV LA + + E +++ I+AN C
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT------------ 299
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
P+++ YN L+NG K ++A+
Sbjct: 300 ----------------------------------PTIATYNALLNGLCKMGRLEEAIDLL 325
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++V + PDVVT+ LI G + K+ A LF+EM +G + V + LIR
Sbjct: 326 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQT 385
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K + ++ M GC VT ++DGL GR+ A + RG+ P + Y
Sbjct: 386 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 445
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC ALE++ ++ K P I LI+GL + A ++ML+
Sbjct: 446 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 505
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD T+N L+ C G T A + S+ + +TY L+SG + + +
Sbjct: 506 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTK 565
Query: 454 GENLVNEMLDEG 465
M + G
Sbjct: 566 ASLYFQHMKERG 577
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%), Gaps = 7/285 (2%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ ++A+ +++ + P + T+N L++G C+ + + A+ L R++ + GC P+VV++
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G E++ E + EM G +V L+ L G++ +A + +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G +P +++ L G G A+ + + +G P+ + + LI GL + RK A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL---RLLASTKGLDPDGMTYHIL 441
++ +M K PD++T+N L++ LC G V+A R +L + G PD TY+IL
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGD-VEAARAFFDEMLEA--GCKPDVYTYNIL 237
Query: 442 VSGYTRE-NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+SG+ + N +L E G D+ TY + +D L+ +K
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKK 282
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ G P TY+ L++G + R +E +L+ +++D G PD+ TY S +DGL ++S
Sbjct: 13 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 72
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 193/401 (48%), Gaps = 20/401 (4%)
Query: 87 QFTHYDFHIFAWASTIDSFRH-DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSND 145
Q H F +A + H D TF +++ L E+H L F +
Sbjct: 105 QLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLK---GEVHKALYF--------HDK 153
Query: 146 GIFSCPEMERI-FHFAVNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFV 201
+ +++++ + +N R+ + A + +R+ +DG RP+V +Y+ +I+
Sbjct: 154 VVAQGFQLDQVSYGTLINGLC---RVGETKAAVQLLRR-VDGKLVRPNVVMYSTIIDSMC 209
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
K + + A Y MV R+ PDVVT++ LISGFC K A+ LF M NPNV
Sbjct: 210 KDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVY 269
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
+F+ LI GF E K E N+ M++ + VT L+DG C +V KA L
Sbjct: 270 TFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM 329
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
++RGV P + Y ++ C A+++ +E+ K P+V+ +L++GL + +
Sbjct: 330 AQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT 389
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A L+++M G + +T+N +L+ +C A L KG+ PD TY +L
Sbjct: 390 SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVL 449
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
++G + R + + + ++L +G+ P++ TY S ++G N
Sbjct: 450 INGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCN 490
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 167/320 (52%), Gaps = 5/320 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFY 213
++ +++ K +ND AF+ +++ R P V Y+ LI+GF + A+ +
Sbjct: 200 MYSTIIDSMCKDKLVND---AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLF 256
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM+ D + P+V TF+ILI GFC+ K A + M +K +VV++N+L+ G+
Sbjct: 257 NRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLV 316
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ ++ M + G + I+++G C V +A +L + + + P Y
Sbjct: 317 KQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTY 376
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV+ LC G ALE+VDE+ +G ++I ++++ + + +A L+ K+ +
Sbjct: 377 NSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE 436
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI PD T+ L+ LC VGR DA ++ KG P+ TY L++G+ + E
Sbjct: 437 KGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDE 496
Query: 454 GENLVNEMLDEGFIPDLATY 473
G ++++M D G IP+ TY
Sbjct: 497 GLAMLSKMKDNGCIPNAITY 516
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 142/289 (49%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++ +K +++ AL +M + +KPD +T N+L++ F + + +F ++ +KG
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+P+ V+F LI+G + + + + +++ G + V+ L++GLC G A
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+L+ + V P Y +++ +C + A ++ E+ K P V+ ++LI G
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ K A L +M+ + I P+ TF+ L++ C G+ +A + + K + D
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+TY+ L+ GY + + ++L N M G PD+ +Y+ ++G +
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIK 352
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 110/210 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+++INGF K + D+A+ ++ M ++ P+VVT+N L+ G C++ + AL L
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM ++G N++++N+++ D+ + + ++ E G + T +L++GLC
Sbjct: 396 VDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A ++ D +G P + Y L+ C +G L ++ ++ G +P+ I
Sbjct: 456 VGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAIT 515
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LI L + +A L+ +M+ G+L
Sbjct: 516 YEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P + F ++ +++ ++++ +M G + +TC +L++ G + + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
++G P + L++ LC +G AL D++ +G ++ TLI GL R
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ + A L+ ++ + + P+ V ++ +++ +C DA L +K + PD +T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
Y L+SG+ + K +L N M+ + P++ T++ +DG K VR+ +
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK-VREAK 288
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++A K N ++ ++ +++ G +P + Y VLING K D A ++
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKE--KGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ P++ T+ LI+GFC FD L + +M++ GC PN +++ LI F + +
Sbjct: 469 LLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528
Query: 276 FDEGVNMAYEMIELG 290
D+ + EMI G
Sbjct: 529 NDKAEKLLREMIARG 543
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 154/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LI G + +A+ DRMV + +PDVVT+N +++G CR+ LAL L
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E+ +V +++T+I + D +++ EM G + S VT LV GLC
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ L+ D R ++P + L++ EG A E+ E+ +G P++I
Sbjct: 266 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G + EA+ +++ M++ PD VTF L++ C V R D ++ S
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL + +TY ILV G+ + + K E L EM+ G +PD+ TY +DGL + K
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 443
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 168/331 (50%), Gaps = 5/331 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V KA + NDG L + M R+++ P+V +NVL++ FVK + +A Y
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVLLDVFVKEGKLQEANELYK 312
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+++T+N L+ G+C + A + M C+P++V+F +LI+G+ +
Sbjct: 313 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 372
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + + + G ++VT ILV G C G++ A EL + GVLP Y
Sbjct: 373 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 432
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G ALE+ ++L K ++ TT+IEG+ + K +A L + +
Sbjct: 433 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 492
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ ++ LC G +A+ L G P+ TY+ L+ + R+
Sbjct: 493 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 552
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM GF D ++ +D L +A K
Sbjct: 553 AKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 5/313 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ +D + F+ M I RP S+ ++ + + ++F+ L F ++ + + ++
Sbjct: 58 KKDDAIALFQEM---IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 114
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T NI+I+ FCR K A + ++ + G P+ +FNTLI+G F E K E V + M
Sbjct: 115 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E GC+ VT +V+G+C G A +L+ R V F Y +++ LC +G
Sbjct: 175 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 234
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A+ + E+ KG SV+ +L+ GL + K + + L++ M+ I+P+ +TFN L
Sbjct: 235 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L+ G+ +A+ L T+G+ P+ +TY+ L+ GY +NR E N+++ M+
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 467 IPDLATYNSYMDG 479
PD+ T+ S + G
Sbjct: 355 SPDIVTFTSLIKG 367
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ SV YN L+ G K +++ MV + P+V+TFN+L+ F + K A
Sbjct: 250 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM +G +PN++++NTL+ G+ + + E NM M+ C VT L+ G C
Sbjct: 310 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 369
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
RV ++ + S+RG++ Y LV+ C G +A E+ E+ G LP V+
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++GL K +A + E + K + V + ++E +C G+ DA L
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
KG+ P+ MTY +++SG ++ E L+ +M ++G P+ TYN+ +
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN ++NG + + AL +M VK DV T++ +I CR+ D A+
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG +VV++N+L+RG K+++G + +M+ + +T +L+D
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++ +A EL + RG+ P Y L++ C + A ++D + + P ++
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G +++ + + + K G++ ++VT++ L++ C G+ A+ L
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEG----ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G+ PD MTY IL+ G + ++ E+L +D G + Y + ++G+
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCK 475
Query: 483 ARK 485
K
Sbjct: 476 GGK 478
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L +G V ++ D A+ + M+R R P +V F+ S R K+F+L L +++ G
Sbjct: 50 LRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 108
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
N+ + N +I F K ++ ++++LG E + T L+ GL EG+V +A
Sbjct: 109 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 168
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L VD + + G P V+ +++ G+
Sbjct: 169 VL-----------------------------------VDRMVENGCQPDVVTYNSIVNGI 193
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R A L+ KM + + D T++ +++ LC G A L TKG+
Sbjct: 194 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 253
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+TY+ LV G + + +G L+ +M+ +P++ T+N +D
Sbjct: 254 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 129/318 (40%), Gaps = 60/318 (18%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y V+I+G K +A +M D P+ T+N LI R+ +
Sbjct: 495 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 554
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERK-------FDEGVNMAYEMIEL-GCE---FSS 295
L EM+ G + + S +I K +G +++EL G E SS
Sbjct: 555 LIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSS 614
Query: 296 VT------CEILVDGL---CNEGRVLKACELVIDFS--RRGVLPKDFDYFGLVEKLCGEG 344
+T C + L E R + + EL D RR + K F
Sbjct: 615 LTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFK------------ 662
Query: 345 NAGIALEVVDELWKKG------------NLPSVIACTTLIEGLRRLRKG-----VEASGL 387
N + + V +EL G LP+ G R R G V A L
Sbjct: 663 NRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMR-RPGRKMTVVTAEEL 721
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M++ GI P+++T++ L++ C R +A+++ L TKG D D L++G R
Sbjct: 722 HKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG-DSD---IRYLLAGLMR 777
Query: 448 ENRR---KEG-ENLVNEM 461
+ R+ EG ENL +++
Sbjct: 778 KKRKGSETEGWENLPDDL 795
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 189/399 (47%), Gaps = 24/399 (6%)
Query: 110 TTFLFIVRSLASSYRFSELHSVL---NFISANPCPCSN----DGIFSCPEMERIFHFAVN 162
T++ I+ SL + E H +L +F S+ P S DG E+++ +
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318
Query: 163 AFVKA---NRM--NDGLL-------AFEA---MRKLIDGR--PSVSIYNVLINGFVKCRE 205
+K NR N +L +FEA +R+++ + P +Y LI+GF K
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A ++D M+ ++ PD +T+ LI GF + K LF EM +G P+ V++ T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI + + ++ EM+++G + VT L+DGLC G + A EL+ + ++G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ Y +V +C GN A++++ E+ G P I TT+I+ RL +A
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+++ML G+ P VTFN L+ C +G D DRL KG+ PD +TY+ L+ +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
N + M ++G PD TYN + G AR
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y LI+ + K E A ++ MV+ + P++VT+ LI G C++ + D A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EMR+KG NV +N+++ G ++ + + EM G + ++T ++D C
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + KA +L+ + RG+ P + L+ C G ++ + +KG +P I
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TL++ + + ++M +G+ PDS T+N L++ C +A L
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
KG P +Y+ L+ + ++ + E L EM G + D YN ++D
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + ++NI+I CR K A L +M + P+VVS++T+I G+ + + +
Sbjct: 254 ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL 313
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M G + + T ++ LC G+ +A +++ + + ++P + Y L+
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G+ A + DE+ K P I TTLI+G + K +E L +M+ G+ PD
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L++ C G V+A L G+ P+ +TY L+ G + L++E
Sbjct: 434 VTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE 493
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M +G ++ YNS ++G+ A
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKA 516
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 139/304 (45%), Gaps = 1/304 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + KA M + M ++ P++ Y LI+G K E D A D M +
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++ +V +N +++G C+ + A+ L +EM G +P+ +++ T+I + D+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM++ G + + VT +L++G C G + L+ +G++P Y L+++
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + ++ + +G P LI+G + R EA L ++M+++G +P
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++N L++ + +A L GL DG Y+ V E + NL +E
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738
Query: 461 MLDE 464
+++
Sbjct: 739 AIEK 742
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 4/266 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+ + F+I A L ++ G V S N + EG+ M
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANN---SEGIEM 244
Query: 283 AYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
A ++ E G +++ + I++ LC G+V +A L++ R P Y +++ C
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G AL+++D++ KG P+ ++I L ++ K EA ++ +M+ + I+PD+V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ L+ +G A++ +K + PD +TY L+ G+ + + E +NL +EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSV 487
+ G PD TY + +D A + V
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMV 450
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 3/325 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F + A + R +D F+ M++ P + +N +++ F+K + + Y
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEK-GVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R ++K V TFNI+I+ C+ K A M G PNVV++NT+I G+ +
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 276 FDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
EG M ++++ G E S T L+ G+C G++ +A ++ G+LP Y
Sbjct: 287 V-EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C +G+ A DE+ ++ LP+V LI L K EA G+++ M
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI+PDS+T+N L+ C G A L +KG+ P +TY L+ ++ NR K
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
++L +++ EG PDL +N+ +DG
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDG 490
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 1/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ +M L +P+V YN +I+G+ + A D M
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENL-GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PD T+ LISG C+ K + A G+ +M+E G P V++NTLI G+ +
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM+ + T +L+ L EG++ +A ++ D G++P Y L
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C GNA A + DE+ KG P+++ T+LI L + + A L EK+++EG
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD + FN L++ C G A L + + PD +TY+ L+ G RE + +E
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
L+ EM G PD +YN+ + G S
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYS 562
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 1/326 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K ++ + E M++ I P+ YN LI+G+ + KA G+ D MVR
Sbjct: 313 ISGMCKGGKLEEASGILEKMKE-IGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P V T+N+LI K D A G+ ++M + G P+ +++N LI G+ +
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EMI G + + VT L+ L R+ A +L R G P + L++
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C GN A ++ E+ K+ +P + TL++G R K EA L+++M + GI PD
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+++N L+ G DA +R + G +P +TY+ L+ G + + E L+ E
Sbjct: 552 ISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKE 611
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKS 486
M+ +G PD +TY S ++G+ S
Sbjct: 612 MVSKGITPDDSTYFSLIEGIGKVDDS 637
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E +R+ I P+VS YN+LI+ + D+A G M + PD +T+NILI+G+CR
Sbjct: 366 EMVRRAI--LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCR 423
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
A L EM KG P +V++ +LI + ++ ++I G +
Sbjct: 424 CGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIM 483
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+DG C G + +A L+ + +R ++P + Y L++ C EG A E++ E+
Sbjct: 484 FNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMK 543
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
++G P I+ TLI G + +A + ++ML G P +T+N L++ LC +
Sbjct: 544 RRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGD 603
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
A+ L +KG+ PD TY L+ G + + E +
Sbjct: 604 LAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 184/394 (46%), Gaps = 12/394 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F WA +RHD + ++ L+ + VL ++ I PE
Sbjct: 118 LRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRR-------IERRPE 170
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
F + + ++ +A ++ + + M+K P +SI N I+ V DKA+ F
Sbjct: 171 ---AFGYVMVSYSRAGKLRNAMRXLTMMQK-AGIEPDLSICNTAIHVLVMGNRLDKAVRF 226
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+RM + P+V+T+N LI G+C + + A L EM KGC+P+ +S+ T++
Sbjct: 227 LERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCK 286
Query: 273 ERKFDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E++ E + +M++ VT V L G +A E + + R
Sbjct: 287 EKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +V C EG A E+V+E++ KG +P V+ T++I GL + RK +A ++ +M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
K G P++V++ LL LC G +++A + ++ P+ +TY +L+ G+ RE +
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKS 466
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +LV EM+ +GF P N + L K
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEK 500
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 151/323 (46%), Gaps = 1/323 (0%)
Query: 154 ERIFHFAVNAFV-KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
++I ++ V F+ K R+ + L E M K + P YN ++ K D+AL F
Sbjct: 273 DKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEF 332
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
R + D V ++ ++ FCR + D A + EM KGC P+VV++ ++I G
Sbjct: 333 LREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQ 392
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
ERK D+ M +M + GC+ ++V+ L++GLC G L+A E++ +P
Sbjct: 393 ERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAIT 452
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ EG + A ++V E+ KKG P+ + LI+ L + K EA ME+ L
Sbjct: 453 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 512
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G + V F ++ C A L PD +TY ++ ++ R +
Sbjct: 513 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572
Query: 453 EGENLVNEMLDEGFIPDLATYNS 475
E L +ML G+IP TY +
Sbjct: 573 EATKLAMKMLRVGWIPTPVTYRT 595
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA------ 209
I + A++ V NR++ + E M ++++ P+V YN LI G+ + A
Sbjct: 206 ICNTAIHVLVMGNRLDKAVRFLERM-QIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAE 264
Query: 210 ----------------LGF-------------YDRMVRD-RVKPDVVTFNILISGFCRNK 239
+GF ++M++D + PD VT+N + ++
Sbjct: 265 MPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHG 324
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL RE E+ + V ++ ++ F E + D+ + EM GC VT
Sbjct: 325 HGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYT 384
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+++GLC E +V +A +++ + G P Y L+ LC GN+ A E+++ +
Sbjct: 385 SVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEX 444
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+P+ I + L+ G RR K EA L+ +M+K+G P V N L++ LC + +A
Sbjct: 445 WWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEA 504
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R G + + + ++ G+ +++ + +L+++M PD+ TY + +D
Sbjct: 505 KRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDA 564
Query: 480 L 480
L
Sbjct: 565 L 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 170/422 (40%), Gaps = 26/422 (6%)
Query: 54 LRFLKTHLLTPTN---NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHT 110
LR L +L +N +Q+T ++ +H L H F + FR D
Sbjct: 293 LRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALE------FLREAEERRFRVDKV 346
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
+ IV S R + ++N + + C P++ + +N + ++
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGC---------IPDVV-TYTSVINGLCQERKV 396
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ M K +P+ Y L+NG K +A + P+ +T+++
Sbjct: 397 DQAKKMLRQMYKH-GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSV 455
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ GF R K A L REM +KG P V N LI+ E K DE + + G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C + V ++ G C + + A L+ D P Y +++ L +G A
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ ++ + G +P+ + T+I R+ + + L+EKML +N ++E L
Sbjct: 576 KLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKL 633
Query: 411 CDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G A +L ++L + +D + T H+L+ Y + N+ M + IP
Sbjct: 634 CSFGNLEQAYKLLGKVLRTASKIDAN--TCHMLIESYLSKGIPLMSYNVACRMFNRNLIP 691
Query: 469 DL 470
DL
Sbjct: 692 DL 693
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 171/373 (45%), Gaps = 40/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F R+ AF + KL+ +P + +N LI G +
Sbjct: 141 FGIPPDVYTLNILINSFCHLRRLG---YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+ + + +PDVVT+ L++G C+ A+ L R M +K C PNV+++NT
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ EMI G CE+ VT
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG + A ++V +RGV P Y L++ C A+
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + KG +P+V + LI G ++++ +A GL+E+M +G++ D+VT+N L+ L
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR A L G PD +TY IL+ + + E L+ + D+
Sbjct: 438 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 497
Query: 471 ATYNSYMDGLSNA 483
YN +DG+ A
Sbjct: 498 LVYNIAIDGMCRA 510
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + PS + L+ K + + L +M + PDV T
Sbjct: 91 NTLDDALSSFNRMLHM-HPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 149
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC ++ A + ++ + GC P+ +FNTLIRG E K E +++ + I
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + VT L++GLC G A L+ ++ P Y +++ LC +
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ KG P + +LI L L + + L+ +M+ I+P+ V F+ ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G A + + +G++PD +TY L+ G+ + E + + M+ +G +
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389
Query: 468 PDLATYNSYMDGLSNARK 485
P++ +YN ++G ++
Sbjct: 390 PNVRSYNILINGYCQIQR 407
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI+ E+ + MV ++ P+VV F+ ++ C+ +A +
Sbjct: 285 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 344
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G P+VV++ L+ G + DE V + M+ GC + + IL++G C
Sbjct: 345 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 404
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ KA L+ S +G++ Y L+ LC G A+ + E+ G +P ++
Sbjct: 405 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
L++ L + EA L++ + + D + +N ++ +C G
Sbjct: 465 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +++ +++ K A D M++ V+PDVVT+ L+ G C + D A+ +
Sbjct: 320 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 379
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KGC PNV S+N LI G+ ++ D+ + + +M G +VT L+ GLC+
Sbjct: 380 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 439
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L + G +P Y L++ LC + A+ ++ + ++
Sbjct: 440 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 499
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG 395
I+G+ R + A L + +G
Sbjct: 500 YNIAIDGMCRAGELEAARDLFSNLSCQG 527
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 1/324 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + KA + + L F +++ PSV YN+L++G+ + + ++A F MV
Sbjct: 379 INGYCKAGNLKEALWLFGDLKR-AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PDV T+ IL++G + + + F EM KG P+ ++NT I E
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI G +VT I +DGLC G + A L + G+ P Y L+
Sbjct: 498 QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAH 557
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A ++ D + G PS + T I R A G +KML+EG+ P+
Sbjct: 558 CERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNE 617
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ LC +GRT A + +GL P+ TY +L+ G +E +E L +E
Sbjct: 618 VTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSE 677
Query: 461 MLDEGFIPDLATYNSYMDGLSNAR 484
M G PD T+N+ G +
Sbjct: 678 MHQHGIHPDHCTHNALFKGFDEGQ 701
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 151/353 (42%), Gaps = 37/353 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+++F + R++ M G PS YNV+ING + E +KA DRM R
Sbjct: 238 LDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RM 296
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
K TFN LI+G+ + A L EM +G P VV++NT+I G F +
Sbjct: 297 SKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAA 356
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
EM +G +T L++G C G + +A L D R G+ P Y L++
Sbjct: 357 RMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDG 416
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR--------------KGV--- 382
C G+ A E+ ++G P V T L+ G R++R KG+
Sbjct: 417 YCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPD 476
Query: 383 ------------------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
EA L E M+ GI D+VT+N L+ LC G DA L +
Sbjct: 477 CFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWM 536
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ GL PD +TY L+ + R +E ++ + ML G P TY ++
Sbjct: 537 KMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFI 589
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L + M V P + N+++ ++D ++ EM + G P++V++NTL+
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 270 FFGERKFDEGVNMAYEMIEL--GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
FF E + D+ + EM GC S VT ++++GL +G + KA +LV D R
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV-DRMRMSKK 299
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
F + L+ G+ A + E+ +G +P+V+ T+I G+ R VEA+ +
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFR-SGNVEAARM 358
Query: 388 -MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+M G+LPD +T+N L+ C G +A L GL P +TY+IL+ GY
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
R +E EM+++G PD++TY M+G R
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 3/290 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + N+++ +D Y M++ ++P +VT+N L+ F R + D A L
Sbjct: 194 PFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKL 253
Query: 248 FREM--REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
REM R GC P+ V++N +I G + + ++ + M + + S+ T L+ G
Sbjct: 254 LREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGY 312
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G V KA L ++ G++P Y ++ + GN A E+ G LP +
Sbjct: 313 FARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDL 372
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +LI G + EA L + + G+ P +T+N LL+ C +G +A R +
Sbjct: 373 ITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQE 432
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+G PD TY IL++G + +EML +G PD YN+
Sbjct: 433 MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 122/241 (50%), Gaps = 7/241 (2%)
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
L L FREM G P + N ++R E ++D+ ++ EM++LG E S VT L+
Sbjct: 179 LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238
Query: 303 DGLCNEGRVLKACELVIDFSRR--GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
D EGRV +A +L+ + R G LP D Y ++ L +G A ++VD + +
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMS 297
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLME-KMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
S LI G R VE +G ++ +M EGI+P VT+N ++ + G V+A
Sbjct: 298 KKASAFTFNPLITGYF-ARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSG-NVEA 355
Query: 420 DRLRLLA-STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
R++ + GL PD +TY+ L++GY + KE L ++ G P + TYN +D
Sbjct: 356 ARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415
Query: 479 G 479
G
Sbjct: 416 G 416
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 146/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y L++GF K + A F+ M + PDV+T+ +ISGFC+ A L
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +G P++++F L+ G+ + + MI+ GC + VT L+DGLC
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + A EL+ + + G+ P F Y +V LC GN A+++V E G +
Sbjct: 892 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + + +A ++ +ML +G+ P VTFN L+ C G D ++L
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ T++ LV Y N K + +M G PD TY + + G NAR
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNAR 1068
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 151/304 (49%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y +I+GF + + +A + M+ ++PD++TF L++G+C+ A
Sbjct: 804 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA 863
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M + GC+PNVV++ TLI G E D + +EM ++G + + T +V+G
Sbjct: 864 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 923
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC G + +A +LV +F G+ Y L++ C G A E++ E+ KG P+
Sbjct: 924 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPT 983
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ L+ G + L+ ML +GI P++ TFNCL++ C A +
Sbjct: 984 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G++PDG TY LV G+ KE L EM +GF ++TY+ + G +
Sbjct: 1044 DMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103
Query: 485 KSVR 488
K V
Sbjct: 1104 KFVE 1107
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ +ING+ + E DK ++M + +KP+ T+ +I CR K A
Sbjct: 702 PDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEA 761
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +G P+ + + TL+ GF YEM +T ++ G C
Sbjct: 762 FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 821
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +++A +L + RG+ P + L+ C G+ A V + + + G P+V+
Sbjct: 822 IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+GL + A+ L+ +M K G+ P+ T+N ++ LC G +A +L
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL+ D +TY L+ Y + + + ++ EML +G P + T+N M+G
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 148/318 (46%), Gaps = 1/318 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N + + ++ E M++ +P+ Y +I + + +A + M
Sbjct: 707 YSTVINGYCRFGELDKVWKLIEKMKQK-GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM 765
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PD + + L+ GFC+ A F EM + P+V+++ +I GF
Sbjct: 766 IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 825
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + +EM+ G E +T L++G C G + A + + G P Y L
Sbjct: 826 VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTL 885
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC EG+ A E++ E+WK G P++ +++ GL + EA L+ + G+
Sbjct: 886 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D+VT+ L++ C G A + KGL P +T+++L++G+ ++GE
Sbjct: 946 NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005
Query: 457 LVNEMLDEGFIPDLATYN 474
L+N ML +G P+ T+N
Sbjct: 1006 LLNWMLAKGIAPNATTFN 1023
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 8/333 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGF 212
R+F V+ + + FE M L+ S ++Y ++ C + A+
Sbjct: 599 RVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSK--DCNKTATAIIV 656
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF-- 270
+ V +V ++NI+I C+ + + A L M KG P+V+S++T+I G+
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
FGE D+ + +M + G + +S T ++ LC ++ +A E + +G+LP
Sbjct: 717 FGE--LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y LV+ C G+ A + E+ + P V+ T +I G ++ VEA L +
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
ML G+ PD +TF L+ C G DA R+ G P+ +TY L+ G +E
Sbjct: 835 MLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L++EM G P++ TYNS ++GL +
Sbjct: 895 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN ++NG K ++A+ + D VT+ L+ +C++ + D A
Sbjct: 911 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 970
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ EM KG P +V+FN L+ GF ++G + M+ G ++ T LV C
Sbjct: 971 ILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC 1030
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ A + D RGV P Y LV+ C N A + E+ KG SV
Sbjct: 1031 IRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVS 1090
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ LI+G + +K VEA + ++M ++G+ D F+
Sbjct: 1091 TYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 134/320 (41%), Gaps = 40/320 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + KA + D AF +I P+V Y LI+G K + D A M +
Sbjct: 851 MNGYCKAGHIKD---AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++P++ T+N +++G C++ + A+ L E G N + V++ TL+ + + D+
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+ G + + VT +L++G C G + +L+ +G+ P + LV+
Sbjct: 968 AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVK 1027
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C + NL + A+ + + M G+ P
Sbjct: 1028 QYC----------------IRNNLKA-------------------ATAIYKDMCSRGVEP 1052
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+ L++ C+ +A L KG TY +L+ G+ + + E +
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIF 1112
Query: 459 NEMLDEGFIPDLATYNSYMD 478
++M +G D ++ + D
Sbjct: 1113 DQMRRDGLAADKEIFDFFSD 1132
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N VK + + L A A+ K + R P Y L+ G R +A + M
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKG 1082
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V T+++LI GF + KKF A +F +MR G + F+ FF + K+
Sbjct: 1083 KGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD-----FFSDTKY 1135
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 147/287 (51%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N+LIN + D ++ +M + + PD +TFN LI+G C K A+ LF EM +
Sbjct: 132 NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK 191
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G PNV+S+ T+I G V++ +M + GC+ + VT ++D LC + V
Sbjct: 192 RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVND 251
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A E + + RG+ P F Y +V C G A + E+ + +P+ + T L++
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVD 311
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + EA + E M ++G+ PD T+N L++ C +A ++ + KG P
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y+IL++GY + R E ++L+ EM + PD TY++ M GL
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 25/419 (5%)
Query: 86 PQFTHYDFHIFAWASTI---------DSFRHDHTTFLFIVRSLASSYRFSELH---SVLN 133
P F ++ H F +++ D F +++ + + +LAS YR ++ SV+
Sbjct: 36 PCFLFFNHHHFLTSTSTKKPSLPKNNDGFVSNNSNNVCVDDALASFYRMVRINPRPSVVE 95
Query: 134 F------------ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR 181
F S C+ +F + +N + N ++ + M
Sbjct: 96 FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
KL P +N LING + +A+ ++ MV+ +P+V+++ +I+G C+
Sbjct: 156 KL-GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNT 214
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+A+ +F++M + GC PNVV+++T+I +R ++ + EM+E G + T +
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSI 274
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
V G CN G++ +A L + R V+P + LV+ LC EG A V + + +KG
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV 334
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P + L++G R EA + E M+++G P + ++N L+ C R +A
Sbjct: 335 EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKS 394
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L K L+PD +TY L+ G + R KE NL EM G P+L TY +DG
Sbjct: 395 LLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 167/328 (50%), Gaps = 5/328 (1%)
Query: 162 NAFVKANRMN----DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ FV N N D L +F M + I+ RPSV + + F K +++ + ++M
Sbjct: 62 DGFVSNNSNNVCVDDALASFYRMVR-INPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMD 120
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
RV +V + NILI+ CR D ++ + +M + G +P+ ++FN LI G E K
Sbjct: 121 LFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIK 180
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E V + EM++ G E + ++ +++GLC G A ++ + G P Y ++
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTII 240
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ LC + A+E + E+ ++G P+V +++ G L + EA+ L ++M+ ++
Sbjct: 241 DSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 300
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P++VTF L++ LC G +A + + KG++PD TY+ L+ GY + E + +
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV 360
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G P +YN ++G +R+
Sbjct: 361 FEIMIRKGCAPGAHSYNILINGYCKSRR 388
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 166/329 (50%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N ++ + + F M K P+V Y +ING K A+ + +M
Sbjct: 166 FNALINGLCNEGKIKEAVELFNEMVKR-GHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ KP+VVT++ +I C+++ + A+ EM E+G PNV ++N+++ GF +
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM+ ++VT ILVDGLC EG V +A + + +GV P Y L
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C + A +V + + +KG P + LI G + R+ EA L+ +M + +
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+VT++ L++ LC +GR +A L + G P+ +TY IL+ G+ + E
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M ++ P++ Y ++G+ A K
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 5/333 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+++ K +ND A E + ++++ P+V YN +++GF + ++A + MV
Sbjct: 240 IDSLCKDRLVND---AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG 296
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V P+ VTF IL+ G C+ A +F M EKG P++ ++N L+ G+ +R +E
Sbjct: 297 RDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNE 356
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ MI GC + + IL++G C R+ +A L+ + + + P Y L++
Sbjct: 357 AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 416
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G AL + E+ G P+++ L++G + EA L++ M ++ + P
Sbjct: 417 GLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP 476
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ V + L+E + G+ A L G PD TY +++ G +E E +L
Sbjct: 477 NIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLF 536
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+M D+GF+P+ +YN + G + S R
Sbjct: 537 RKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 1/322 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ F ++N+ F+ M D P+ + +L++G K +A ++ M
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGR-DVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PD+ T+N L+ G+C + + A +F M KGC P S+N LI G+ R+
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE ++ EM +VT L+ GLC GR +A L + G P Y L
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G+ AL+++ + +K P+++ T LIEG+ K A L K+ +G
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT 509
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ +++ L G + +A L G P+ +Y++++ G+ +
Sbjct: 510 RPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 569
Query: 457 LVNEMLDEGFIPDLATYNSYMD 478
L++EM+ + F +L+T+ +D
Sbjct: 570 LIDEMVGKRFSVNLSTFQMLLD 591
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 3/322 (0%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N K + + F+ M + +G +P+V Y+ +I+ K R + A+ F MV
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQ--NGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE 261
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+V T+N ++ GFC + + A LF+EM + PN V+F L+ G E E
Sbjct: 262 RGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSE 321
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M E G E T L+DG C + + +A ++ R+G P Y L+
Sbjct: 322 ARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C A ++ E++ K P + +TL++GL +L + EA L ++M G P
Sbjct: 382 GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHP 441
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ LL+ C G +A +L K L+P+ + Y IL+ G + + + L
Sbjct: 442 NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELF 501
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
+++ +G PD+ TY + GL
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGL 523
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 35/261 (13%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+S N D AL F M P+VV F + F ++++ V++ +M
Sbjct: 64 FVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFR 123
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ + IL++ LC V DFS +
Sbjct: 124 VTHNVYSLNILINCLCRLNHV--------DFS---------------------------V 148
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
V+ +++K G P I LI GL K EA L +M+K G P+ +++ ++ L
Sbjct: 149 SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGL 208
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G T A + G P+ +TY ++ ++ + ++EM++ G P++
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268
Query: 471 ATYNSYMDGLSNARKSVRQTR 491
TYNS + G N + TR
Sbjct: 269 FTYNSIVHGFCNLGQLNEATR 289
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 206/466 (44%), Gaps = 58/466 (12%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
QIT S ++ +K++ H +D A A + FRHDH TF I+ L + +F
Sbjct: 12 QITNSLVVQLIKAEKDVHKAVNMFDS---ATAEYGNGFRHDHETFGLIISRLVTVNQFRP 68
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
+L + C + D IF + + +R D + F M R
Sbjct: 69 AEGMLERMKQEKCMVTED----------IFLSICRGYGRVHRPLDAIRVFHKMEGF-QLR 117
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK-FDLALG 246
P+ Y +++ V+ +A+GFY M + VV+ NILI C+NK+ D AL
Sbjct: 118 PTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALR 177
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F+EM +GC P+ ++ TLI G E + EM + G S VT L+ GLC
Sbjct: 178 IFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLC 237
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +A L+ + R + P F Y L++ LC G++ A+++++ + KK +LP+++
Sbjct: 238 QSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMV 297
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD------ 420
+TLI GL + RK EA ++++M +G+ P++ + ++ LC G +A
Sbjct: 298 TYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEM 357
Query: 421 ------------------------------------RLRLLASTKGLDPDGMTYHILVSG 444
+L L T+ + + T+ LV
Sbjct: 358 VLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKC 417
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ + + ++ EM+ +G IPD +N + GL + RK VR+
Sbjct: 418 FCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWD-RKKVREA 462
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N K ++ + + + MR I G +P+ +Y +I+G + +A F D MV
Sbjct: 303 INGLCKERKLREAVEILDRMR--IQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLG 360
Query: 220 RVKPDVVTF-------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ P+ ++ N+++ G C N A L+ MR + + + +F+ L++ F
Sbjct: 361 GISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCK 420
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE-LVIDFSRRGV 326
+ + EM+ GC +++ GL + +V +A E L+++ ++ V
Sbjct: 421 RGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKFV 475
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 160/331 (48%), Gaps = 7/331 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD- 219
+ +R++ L F M+KL P+ Y L+ G + AL + M+ D
Sbjct: 173 IKGLCMEHRISKAALLFTRMQKL-GCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231
Query: 220 -----RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
KP V++++I+I C++++ D A LF EM+ +G P V+S+ +LI GF
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGG 291
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K++E + EM+ G + + VT +L+D LC EG+V++A +L+ +RG++P Y
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+E C G+ A E+ + KG P VI T LI G + K EA L ML+
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD T+ LL L G+ DA +L + G+ D Y I ++G + E
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L N++ D+ +N +DGL A K
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 41/339 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +S + L++G K + + + Y++M + PD T NIL++ C + L +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +G P++V++ TLI+G E + + + M +LGC +++T L+ GLC
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 308 EGRVLKACEL------------------VIDFS---------RR--------------GV 326
G + A +L VI +S RR G+
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L+ C G A + +E+ +G P+V+ LI+ L + K +EA
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E M++ GI+P+ +T+N L+E C VG A L + +KG +PD + Y +L++GY
Sbjct: 334 LLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYC 393
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++ +E L N ML G PD+ TY + + GL K
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A F+ M+ P + +F L+SG + K + L+ +MR G +P+ + N L+
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ EG+ + ++ G VT L+ GLC E R+ KA L + G
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL------PSVIACTTLIEGLRRLRKG 381
P Y L++ LC GN IAL++ E+ +L P VI+ + +I+ L + R+
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L E+M +G+ P +++ L+ C G+ +A RL +G+ P+ +T+++L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +E + E ++L+ M+ G +P+L TYNS ++G
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 356
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++A K R ++ FE M K+ P+V Y LI+GF ++++A ++ M
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+P+VVTFN+LI C+ K A L M ++G PN++++N+LI GF
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M GCE + +L++G C +V +A +L + G P Y L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L G G A ++ + G + + GL + EA L K+ I
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D FNCL++ LC G+ A L + L PD +TY+I++ + R + +
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +M G PD TY + + G ++K
Sbjct: 544 LFQKMEKNGCTPDKITYATLIRGFFESKK 572
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
++ P I+ +N K + + + F ++ + + + +N LI+G K +
Sbjct: 445 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY-NIKLDIECFNCLIDGLCKAGKL 503
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+ A ++++ ++ ++PDVVT+NI+I FCR + A LF++M + GC P+ +++ TL
Sbjct: 504 ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 563
Query: 267 IRGFFGERKFDEGVNMAYEMIE 288
IRGFF +K ++ V + + M++
Sbjct: 564 IRGFFESKKLEKVVELLHMMVQ 585
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 52/289 (17%)
Query: 152 EMERIFHFAVNAFVKANRMNDGLLAFEAMR--KLIDGR------------PSVSIYNVLI 197
E +R+F+ VN V+ N + +L + K+I+ + P++ YN LI
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
GF + + A + M +PDV+ + +LI+G+C+ K + A+ L+ M + G
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414
Query: 258 PNVVSFNTLIRGFF-----GERKFDEGVNMAYE--------------MIELGCEFSS--- 295
P+V ++ L+ G F G+ K GV Y + + GC F +
Sbjct: 415 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 474
Query: 296 ------------VTC-EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ C L+DGLC G++ A EL + + P Y ++ + C
Sbjct: 475 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 534
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLM 388
G A + ++ K G P I TLI G ++L K VE +M
Sbjct: 535 GGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ KA ++ FE + + + +P V YN++I+ F + + KA + +M
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQE-ELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 548
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
++ PD +T+ LI GF +KK + + L M ++ + +V
Sbjct: 549 EKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY LI+GF K A +D M + ++ PD +T+ +I G C+ + A L
Sbjct: 256 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 315
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM K P+ V++ LI G+ E K E ++ +M+++G + VT L DGLC
Sbjct: 316 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A EL+ + R+G+ + Y LV LC GN A++++ ++ G P +
Sbjct: 376 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + R+ V A L+ +ML + P VTFN L+ C G D ++L
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ TY+ L+ Y N + + M +G +PD TYN + G AR
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKAR 552
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 142/289 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YN +I K + +A M+ + + PD V + LI GFC+ A
Sbjct: 220 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM+++ +P+ +++ +I G + E + +EM+ E VT L+DG C
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++ +A L + G+ P Y L + LC G A E++ E+ +KG ++
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+L+ GL + +A LM+ M G PD+VT+ L++ C V A L
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ L P +T+++L++G+ ++GE L+ ML++G +P+ TYNS
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 163/404 (40%), Gaps = 48/404 (11%)
Query: 111 TFLFIVRSLASSYRFSELHSVL-NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++ L + + +E VL IS P DG+ I+ ++ F K
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAP---DGV--------IYTTLIDGFCKLGN 273
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++ F+ M+K P Y +I G + +A + MV R++PD VT+
Sbjct: 274 VSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI G+C+ K A L +M + G PN+V++ L G + D + +EM
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E + T LV+GLC G + +A +L+ D G P Y L++ C A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGL---------RRLRKGVEASGLM------------ 388
E++ ++ + P+V+ L+ G +L K + G+M
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512
Query: 389 --------------EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
M +G++PD T+N L++ C +A L KG +
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+Y+ L+ G+ + + E L +M EG + D YN + D
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 7/287 (2%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILIS-------GFCRNKKFDLALGLFREMREKGCNPNVV 261
A +D+M+ + V + N+ IS G K + L L EM+ KG PN
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++N +I K E + EMI G V L+DG C G V A L +
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+R + P Y ++ LC G A ++ E+ K P + T LI+G + K
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L +ML+ G+ P+ VT+ L + LC G A+ L KGL+ + TY+ L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
V+G + + L+ +M GF PD TY + MD +R+ VR
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 163/377 (43%), Gaps = 20/377 (5%)
Query: 118 SLASSYR-FSELHSVL---NFISANPCPCSNDGIFSCPEMERIFHFAV------------ 161
+++S+YR F E+ +FI+ C E +++FH V
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332
Query: 162 ---NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + K +M + M ++ P++ Y L +G KC E D A M R
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++ ++ T+N L++G C+ D A+ L ++M G +P+ V++ TL+ + R+
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +M++ + + VT +L++G C G + +L+ +G++P Y L++
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C N E+ + KG +P LI+G + R EA L M+ +G
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 571
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
++N L++ + ++A L +GL D Y+I E + + L
Sbjct: 572 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 631
Query: 459 NEMLDEGFIPDLATYNS 475
+E +++ + D+ T N+
Sbjct: 632 DEAIEKCLVGDIQTKNT 648
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 215/464 (46%), Gaps = 24/464 (5%)
Query: 31 RPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTH 90
RP+T V L T + ++ + T + P ++ P L+ + + Q
Sbjct: 21 RPKTTAVALLHSNSTGSPNNPLPESYTVTPPIKPWPQRLYPKRLVSMITRQ-----QNLD 75
Query: 91 YDFHIFAWASTID-SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS 149
IF +A +F H++ T+ I+ L+ + F + +L+ + + C
Sbjct: 76 LALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCG------ 129
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
E IF + + A + + L F ++ R SV N L+N FV+ + +D
Sbjct: 130 ----ENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQR-SVRSLNTLLNAFVQNKRYDLV 184
Query: 210 LGFYDRMVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ + R + V P+V T NILI C+ + A+ + EM G PNVV++ T++
Sbjct: 185 HAMF-KNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTIL 243
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G+ + E+ + G + T IL++G C +GR+ A +L+ D GV
Sbjct: 244 GGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVE 303
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y +VE C E AG A ++D++ ++ +PS C +I+ L K EA L
Sbjct: 304 PNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACEL 363
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++MLK+ +PD+ + L+ LC G+ +A +L +G P +TY+ L++G
Sbjct: 364 WKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKL-FGEFERGAIPSLLTYNTLIAGMCE 422
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS---NARKSVR 488
+ E L ++M+++G+ P+ TYN + G S NA++ +R
Sbjct: 423 KGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIR 466
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +I + LI+ K + +A + R + P ++T+N LI+G C + A L
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAI-PSLLTYNTLIAGMCEKGELSEAGKL 432
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M EKG PN ++N LI+GF EG+ + EM++ C + T IL++ LC
Sbjct: 433 WDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCK 492
Query: 308 ---EGRVLKACELVIDFSRRGVLPKDFDYF 334
EG V K + + + GV +D F
Sbjct: 493 MGMEGEVDKVVSMAM--ASGGVDSDSWDLF 520
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 153/327 (46%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V ++ + R +D + + ++YN L+N + Y+ M
Sbjct: 131 VESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRG 190
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++PDVVT N LI CR + A+ + EM P+ +F TL++GF E + +
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAAL 250
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M+E GC + VT +L++G C GRV A + G P Y V L
Sbjct: 251 RVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCL 310
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ AL+V+D + ++G+ P V T+I L + + EA G++ +M+ G LPD+
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
TFN L+ LC R +A L + KGL PD T++IL++ + G L E
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSV 487
M G PD TYN +D L + K V
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLV 457
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 163/338 (48%), Gaps = 3/338 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
C + +N + K R+ D L + +++ DG P YN ++ +
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQ--KEIADGFEPDQVTYNTFVHCLCQNGHVSH 318
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL D M+++ PDV T+N +I+ +N + D A G+ +M ++GC P+ +FNTLI
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ + +E +++A E+ G T IL++ LC G L + G P
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ Y L++ LC G AL+++ E+ G S + T+I+ L + + EA +
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++M GI +VTFN L++ LC R DA L +GL P +TY+ +++ Y ++
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
K+ +++ M GF D+ TY + ++GL A ++
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 596
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 148/328 (45%), Gaps = 35/328 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN +IN K E D+A G ++MV PD TFN LI C + + AL L
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
RE+ KG +P+V +FN LI G+ + EM GC VT IL+D LC+
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCS 452
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+++ A +L+ + G Y +++ LC + A EV D++ G S +
Sbjct: 453 MGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVT 512
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN----------------------- 404
TLI+GL + ++ +A+ L+E+M+KEG+ P ++T+N
Sbjct: 513 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572
Query: 405 ------------CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
L+ LC GRT A +L KG+ P Y+ ++ R N +
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 632
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +L EM + G PD TY GL
Sbjct: 633 DALSLFREMTEVGEPPDALTYKIVFRGL 660
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)
Query: 129 HSVLNFISANPCPCSNDGIFS------CPEMERIFHFAVNAFVKANRMNDGL-LAFEAMR 181
++V+N +S N GI + C F+ + A NR+ + L LA E
Sbjct: 339 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTV 398
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
K + P V +N+LIN K + + ++ M PD VT+NILI C K
Sbjct: 399 KGLS--PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKL 456
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
AL L +EM GC + V++NT+I + + +E + +M G S+VT L
Sbjct: 457 VNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTL 516
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGLC R+ A EL+ + G+ P + Y ++ C +G+ A ++++ + G
Sbjct: 517 IDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
V+ TLI GL + + A L+ M +GI P +N +++ L DA
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENR-RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + G PD +TY I+ G R KE + + EM+++GF+P+ +++ +GL
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696
Query: 481 SN 482
N
Sbjct: 697 LN 698
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 171/337 (50%), Gaps = 4/337 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SC F + ++N++ M+++ P +IYN LI+G+ K ++F +
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEM-GCVPDDAIYNALISGYSKAKDFGQ 63
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A F MV++ P VVT+ ++ G C+ + A+ L EMR+KGC+PN+ ++N ++
Sbjct: 64 AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G ERK DE M EM G VT + GLC RV +A + + +R V P
Sbjct: 124 GLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFL---ARMPVTP 180
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y ++ LC G+ A ++D++ +G P V+ ++LI+G + + A GL+
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+ MLK G P+ V +N LL L +G A+ + + +G PD ++Y+ + G +
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R K+ + + + M++ G P+ ++Y+ ++ L ++
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE 337
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 8/303 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +ING K + D A D+M PDVVT++ LI GFC+ + + A+GL
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + GC PN+V++N+L+ + +M EM G V+ +DGLC
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV KA + RG P Y LVE+LC + A+ +V++ +K + ++
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGIL-PDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T L++GL + + EA L K+L E I PD +N +L+ C R +D L
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK-RRQIDK---ALQI 415
Query: 427 STKGLDPDG---MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ L+ + +T++ILV G ++R + E ++ M+DEGFIPD TY + +D +
Sbjct: 416 HKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475
Query: 484 RKS 486
KS
Sbjct: 476 GKS 478
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +PD TF IL+ G CR+ + + A L M+E GC P+ +N LI G+ +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F + EM++ C + VT +VDGLC GR A +L+ + +G P + Y
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+VE LC E A ++++E+ +G P V+ + I+GL + + EA + +M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V++ ++ LC G A R+ + +G PD +TY L+ G+ + +
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L++ ML G P++ YNS + L
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGAL 262
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 14/324 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F K + + ++M KL RP++ YN L+ + KA M R
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKL-GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDVV++N I G C+ ++ A +F M E+GC PN S++ L+ +++ D+ +
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL---VIDFSRRGVLPKDFDYFGLV 337
+ + E + +L+DGLC GR +AC L V+D + P F Y ++
Sbjct: 343 TLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLD--EKICEPDVFFYNVML 400
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C AL++ ++ ++ N +V+ L+ GL + +A ++ M+ EG +
Sbjct: 401 DSHCKRRQIDKALQIHKQMLER-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI 459
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD VT+ L++ +C G++ A L A G PD +TY L++G EN +E L
Sbjct: 460 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 519
Query: 458 VNEMLDEGFIPDLATYNSYMDGLS 481
++ D+A +N+ + G +
Sbjct: 520 FTKL-------DVALWNAMILGYA 536
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+ + PD+ TF LL LC + A +L G PD Y+ L+SGY++
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + EM+ +P + TY + +DGL A ++
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRT 96
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y L++ KC + AL ++ V+ PDVVT++ LI+G + A L
Sbjct: 460 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL 519
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
F ++ +V +N +I G+ D G+ + E+IE
Sbjct: 520 FTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIE 553
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR---EFDKALGFY 213
F+ +NA K +MN E M K+ P+V YN LI+G+ K + KA
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDM-KVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MV + V P++ TFNILI GF ++ +L +F+EM ++ PNV+++N+LI G
Sbjct: 285 KEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNG 344
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K +E + M +M+ G + + +T L++G C G + +A ++ +G P Y
Sbjct: 345 GKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMY 404
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C G + +E+ ++G +P V LI GL R A L +++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTN 464
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G LPD VTF+ L+E C G + A L S GL P +TY+I++ GY +E K
Sbjct: 465 KG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKA 523
Query: 454 GENLVNEMLDEGFIP-DLATYNSYMDGLSNARK 485
N+ +M E + ++A+YN + G S K
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 161/321 (50%), Gaps = 7/321 (2%)
Query: 163 AFVKANRMND-GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
A +K NR D L E +R+ I +P+V +NV+IN K + +KA + M
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKI--QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGY 254
Query: 222 KPDVVTFNILISGFCR---NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
P+VV++N LI G+C+ N K A + +EM E +PN+ +FN LI GF+ +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPG 314
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM++ + +T L++GLCN G++ +A + GV P Y L+
Sbjct: 315 SLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLIN 374
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C G AL++ D + +G P+ LI+ +L K + L E+M +EGI+P
Sbjct: 375 GFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+NCL+ LC G A +L + KGL PD +T+HIL+ GY ++ L+
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLL 493
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
EM G P TYN M G
Sbjct: 494 KEMSKMGLKPRHLTYNIMMKG 514
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 36/308 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F K + + L F+ M D P+V YN LING + ++A+G D+M
Sbjct: 299 FNILIDGFWKDDNLPGSLKVFKEMLDQ-DVIPNVITYNSLINGLCNGGKINEAIGMRDKM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+P+++T++ LI+GFC+N AL +F ++ +G P +N LI + K
Sbjct: 358 VSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKI 417
Query: 277 DEGVNMAYEMIELG---------CEFSS-------------------------VTCEILV 302
D+G + EM G C + VT IL+
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTFHILM 477
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+G C+ G KA L+ + S+ G+ P+ Y +++ C EGN A + ++ K+ L
Sbjct: 478 EGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 363 P-SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+V + L++G + K +A+ L+ +ML++G++P+ +T+ + E++ D G D +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEG 597
Query: 422 LRLLASTK 429
STK
Sbjct: 598 HLFNVSTK 605
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 126/289 (43%), Gaps = 41/289 (14%)
Query: 231 LISGFCRNKKFDLALGLFR--EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ GF RN +F M + C ++++ + L+ + +F+ G
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGY 181
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + S+++C+ L+ L + R L + RR + P F + ++ LC G
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRR-------------LRKGVE------------ 383
A +V++++ G P+V++ TLI+G + L++ VE
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301
Query: 384 -------------ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+ + ++ML + ++P+ +T+N L+ LC+ G+ +A +R + G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ P+ +TYH L++G+ + KE ++ + + +G P YN +D
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 160/313 (51%), Gaps = 2/313 (0%)
Query: 175 LAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + + +L+ + +P+V Y +LI + D+AL D M+ +KPD+ T+N +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ D A + R + KG P+V+S+N L+R + K++EG + +M C+
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT IL+ LC +G++ +A L+ +G+ P + Y L+ C EG +A+E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + G LP ++ T++ L + K +A + K+ + G P+S ++N + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G + A + L + G+DPD +TY+ ++S RE E L+ +M F P + T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 473 YNSYMDGLSNARK 485
YN + G A +
Sbjct: 511 YNIVLLGFCKAHR 523
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 8/340 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREF 206
F +M +IFH + ++ + L E M RK + P V + LI GF R
Sbjct: 87 FRDTQMLKIFHRSC----RSGNYIESLHLLETMVRKGYN--PDVILCTKLIKGFFTLRNI 140
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ + ++ +PDV +N LI+GFC+ + D A + MR K +P+ V++N +
Sbjct: 141 PKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I K D + + +++ C+ + +T IL++ EG V +A +L+ + RG+
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F Y ++ +C EG A E+V L KG+ P VI+ L+ L K E
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEK 319
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
LM KM E P+ VT++ L+ LC G+ +A L L KGL PD +Y L++ +
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE R + M+ +G +PD+ YN+ + L K+
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 178/382 (46%), Gaps = 17/382 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F D T+ ++ SL S + VLN + ++ C + + + +
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT------------VITYTI--L 234
Query: 165 VKANRMNDGL-LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
++A + G+ A + M +++ +P + YN +I G K D+A +
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGS 294
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+PDV+++NIL+ K++ L +M + C+PNVV+++ LI + K +E +N
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ M E G + + + L+ C EGR+ A E + G LP +Y ++ LC
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A ALE+ +L + G P+ + T+ L + A ++ +M+ GI PD +
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N ++ LC G +A L + + P +TY+I++ G+ + +R ++ N++ M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 462 LDEGFIPDLATYNSYMDGLSNA 483
+ G P+ TY ++G+ A
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFA 556
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 163/322 (50%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + K RM D + F+ M + PS +YN LI G+ + D AL + + MV+
Sbjct: 190 ISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRG 249
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ V T+N+L+ + + A + EM++ G +P+V ++N LI G+ E + +
Sbjct: 250 IAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKAL 309
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM + G ++VT L+ +G+V + L ++G+ P Y L+
Sbjct: 310 EVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSH 369
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ A E++ E+ KK P + TL+ G L + EA L+++M K GI PD
Sbjct: 370 CTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDL 429
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V++N L+ G DA R+R KG +P MTY+ L+ G + + + ENL+ E
Sbjct: 430 VSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKE 489
Query: 461 MLDEGFIPDLATYNSYMDGLSN 482
M+ +G PD +TY S ++GL+
Sbjct: 490 MVAKGITPDDSTYISLIEGLTT 511
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 206/467 (44%), Gaps = 39/467 (8%)
Query: 28 LPSRPETPPVTLPSVTLTPTA----HHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLH 83
LP +P +LP + LT +A H T L + + L+ P + LH L S L
Sbjct: 43 LPHLSASP--SLPHLLLTASAAARPHATSLRLYAQLKSLSVP----IPVASLHPLLSSLP 96
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHD----HTTFLFIVRSLASSYRFSELHSVLNFISANP 139
P F +FA D +R TTF ++R L ++ + L + P
Sbjct: 97 SAPAFA-----LFA-----DIYRLRLPLCTTTFNIMLRHLCAT---GKPVRALELLRQMP 143
Query: 140 CPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLING 199
P + ++ + F R+ L MR+ P Y LI+G
Sbjct: 144 RPNAV-----------TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISG 192
Query: 200 FVKCREFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ K + A+ +D M+ + V P V +N LI G+C K D+AL +M ++G
Sbjct: 193 WCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAM 252
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
V ++N L+ F + + + + EM + G T IL++G C EG KA E+
Sbjct: 253 TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF 312
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ S++GV Y L+ +G + + KKG P V+ LI
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
A +M +M K+ I PD +T+N L+ C +GR +A L + +G+ PD ++Y
Sbjct: 373 GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSY 432
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L+SGY+ + K+ + +EM+D+GF P L TYN+ + GL R+
Sbjct: 433 NTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQ 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP V +YN LIN + ++A M + R+ PD +T+N L+ GFC + D A
Sbjct: 356 RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEART 415
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM ++G P++VS+NTLI G+ + + + + EM++ G + +T L+ GLC
Sbjct: 416 LIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLC 475
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+ A L+ + +G+ P D Y L+E L E
Sbjct: 476 KIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 152 EMERIFHFAVNAFVKANR-MNDGLL-----------AFEAMRKLIDGR--PSVSIYNVLI 197
E +R+F+ AV ++ + M + L+ A+E M ++ R P YN L+
Sbjct: 342 ETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLM 401
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
GF D+A D M + ++PD+V++N LISG+ AL + EM +KG N
Sbjct: 402 RGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFN 461
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
P ++++N LI+G R+ D+ N+ EM+ G T L++GL E
Sbjct: 462 PTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 2/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K NR+ + E M + P Y ++ K + D AL + M
Sbjct: 87 INWLCKLNRVEEARELIEKMARY--APPDALTYGPIVERLCKTKRIDDALATVEEMATRG 144
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KPD +N ++SG C+ +K + A LF +M ++ NPNVV++NTLI G + +
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G + V+ L+DG C + ++ A ++ R +P Y L++ L
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G A EV+D + KKG P+V + LI+G ++R+ EA L+E+M+ +GI P
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N LL LC + DA +L + + P +TY+ L+ + L E
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD TY++ GL+ A K
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGK 409
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 16/362 (4%)
Query: 102 IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAV 161
+ F+ + I+ L R E ++ ++ P D + P +ER+
Sbjct: 73 LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPP---DALTYGPIVERL----- 124
Query: 162 NAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
K R++D L E M R + +P IYN +++G + + ++A +++MV+
Sbjct: 125 ---CKTKRIDDALATVEEMATRGI---KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
R+ P+VVT+N LI+G C+ + + A LF+EM KG P VS+NTLI GF ++
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ +M+ C + VT L+DGL G+V A E++ ++GV P Y L++
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDG 298
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C A ++++++ +G P+V+ L+ L R K +A L M + P
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPT 358
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+N LL LC + A RL KG PD +TY L G TR + E + L+
Sbjct: 359 VVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELME 418
Query: 460 EM 461
+M
Sbjct: 419 KM 420
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 166/363 (45%), Gaps = 35/363 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + F KA R+ ++ M + S Y +LI+ K FD+A M
Sbjct: 13 FNTVADGFAKAGRLEQVKEVYQGMVE-AGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 217 VRDRVKPDVVTFNILISG----------------------------------FCRNKKFD 242
R K + ++ +I+ C+ K+ D
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKTKRID 131
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
AL EM +G P+ +N ++ G E K +E + +M++ + VT L+
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC R+ A EL + + +G +P + Y L++ C + + A +V D++ + +
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V+ TTLI+GL + K A+ +++ M+K+G+ P+ T++CL++ C V R +A +L
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
T+G+ P +TY+IL++ R ++ ++ L M P + TYN+ + L +
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371
Query: 483 ARK 485
++
Sbjct: 372 HKQ 374
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 1/270 (0%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M RV P TFN + GF + + + +++ M E G + LI
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
FDE + + M + ++ +++ LC RV +A EL+ +R P Y
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGP 119
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+VE+LC AL V+E+ +G P ++ GL + K EA L EKM+K+
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P+ VT+N L+ LC R A L + KG P ++Y+ L+ G+ ++ +
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ ++M+ +P++ TY + +DGLS + K
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGK 269
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 1/230 (0%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P +FNT+ GF + ++ + M+E G + IL+ LC G +A +L
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + K Y ++ LC A E+++++ + P + ++E L +
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCK 126
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
++ +A +E+M GI PD+ +N +L LC + +A L + ++P+ +T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
Y+ L++G + R + L EM +G++P +YN+ +DG + V
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N+ +A+++ D AF+ R + R P+V YN L+ ++ D A Y
Sbjct: 327 YNILLNSLCRADKLED---AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 383
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
M+ PD +T++ L G R K A L +M+ NP
Sbjct: 384 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 219/494 (44%), Gaps = 42/494 (8%)
Query: 13 IHNKSPPP------------PPAPSIPLPSRPETPPVTLPSVTL---------TPTAHHT 51
IHN +P P P S + + P++LP ++L P HT
Sbjct: 39 IHNNNPNPDYSLNPTLKRILPSLTSHHITNLINLNPLSLPPLSLFSFFNYLASRPPFRHT 98
Query: 52 HLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTT 111
H L+ N SL F+ SK+ + + RH+H+
Sbjct: 99 LHNYSTMAHFLSSHNLLSQTHSLFLFIISKM---GHHSSTSLISSLIQTVPTHHRHNHSV 155
Query: 112 FLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
+F ++ + S + L + N FS P + + +K N+
Sbjct: 156 LVFDALIIAYTDSEFIEDAIQCLRLVKKNN--------FSIPVCG--CDYLLRRVMKLNQ 205
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
F P+V ++N+L++GF K + A +D + R ++P VV+FN
Sbjct: 206 QPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFN 265
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LISG+CR+K + L M + +P+V +++ LI G E + +E + EM E+
Sbjct: 266 TLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEM 325
Query: 290 GCEFSSVTCEILVDGLCNEGRV---LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + VT L+DG C G++ L+ E++ D RG+ P Y L+ LC +G+
Sbjct: 326 GLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKD---RGIRPDLITYNALINGLCRDGDL 382
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++++E+ G P I TTL++G + A + ++M++EGI D V F L
Sbjct: 383 KEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTAL 442
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC GR DA+R+ + G PD TY +++ + ++ K G L+ EM +G
Sbjct: 443 ISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGR 502
Query: 467 IPDLATYNSYMDGL 480
+P + TYN+ M+G
Sbjct: 503 VPGVVTYNALMNGF 516
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 169/340 (49%), Gaps = 1/340 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
+ P +F+ ++ F K + + + F+ + + RPSV +N LI+G+ + + +
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRR-GLRPSVVSFNTLISGYCRSKNVE 278
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ M +R+ PDV T++ LI+G C+ + + A GLF EM E G PN V+F TLI
Sbjct: 279 EGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLI 338
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G K D + M + G +T L++GLC +G + +A +L+ + G
Sbjct: 339 DGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFK 398
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + L++ C +G+ ALE+ D + ++G +A T LI GL R + +A +
Sbjct: 399 PDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERM 458
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ ML G PD T+ +++ C G +L G P +TY+ L++G+ +
Sbjct: 459 LKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCK 518
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ + K + L++ ML+ +P+ T+N +DG SV
Sbjct: 519 QGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSV 558
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 10/301 (3%)
Query: 149 SCPEMERI------FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
S E ERI + +N K +R+ + F+ M ++ P+ + LI+G K
Sbjct: 285 SVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEM-GLVPNGVTFTTLIDGQCK 343
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ D AL ++ M ++PD++T+N LI+G CR+ A L EM G P+ ++
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
F TL+ G + D + + M+E G E V L+ GLC +GRV A ++ D
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G P D Y +++ C +G+ + +++ E+ + G +P V+ L+ G + +
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
A L+ ML ++P+ +TFN LL+ C G +VD ++ KGL D +Y LV
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD---FKIFNGEKGLVSDYASYTALV 580
Query: 443 S 443
+
Sbjct: 581 N 581
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 161/323 (49%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K ++ + E M++ I RP+ YN LI+G+ + A + D+MVR+
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKE-IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P V T+N+LI + K D A G+ +EM EKG P+ V++N LI G+ +
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAF 386
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EMI G + + VT L+ L GR+ +A +L R+G+ P + L++
Sbjct: 387 TLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGH 446
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C GN A ++ E+ + +P + TL++G R K A L+E+M GI PD
Sbjct: 447 CANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+++N L+ G DA R+R + G +P +TY+ L+ G + E L+ E
Sbjct: 507 ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKE 566
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M+ +G P+ TY S ++G+ N
Sbjct: 567 MISKGITPNDNTYLSLIEGIGNV 589
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 175/387 (45%), Gaps = 71/387 (18%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
F+K+NR + + M ++ + SV +N++IN K + KA F M +KP
Sbjct: 166 FLKSNRTEKAWVLYAEMFRM-RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKP 224
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+VVT+N +I G+C + + A +F M+ +G P+ ++ + I G E K +E M
Sbjct: 225 NVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGML 284
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKA----------------------------- 314
+M E+G ++VT L+DG CN+G + A
Sbjct: 285 EKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLD 344
Query: 315 CEL------VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
C++ + + S +G++P Y L+ C GN A + DE+ KG P+ +
Sbjct: 345 CKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTY 404
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGI-------------------------------- 396
T+LI L + + +A L EK++++GI
Sbjct: 405 TSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQ 464
Query: 397 ---LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+PD VTFN L++ C G+ A L ++G+ PD ++Y+ L+SGY++ K+
Sbjct: 465 MKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD 524
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +EML GF P L TYN+ + GL
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGL 551
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 4/306 (1%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLIN-GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
LA + + +PS+ + IN G RE LG ++ + V +++LI
Sbjct: 73 LAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKT---YVLYDLLIR 129
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C K+ D A F M+ KG P+V + N ++ F + ++ + EM + +
Sbjct: 130 ACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKS 189
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S VT I+++ LC EG++ KA E + G+ P Y ++ C G A +
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIF 249
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D + +G P + I G+ + K EASG++EKM + G+ P +VT+N L++ C+
Sbjct: 250 DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNK 309
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A R +GL P TY++L+ + + E + ++ EM ++G +PD TY
Sbjct: 310 GNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTY 369
Query: 474 NSYMDG 479
N ++G
Sbjct: 370 NILING 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 324 RGVLP-KDFDYFGLVEKLCGEGNAGI-ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
RGVL K + + L+ + C E G A E D + KG +P V AC ++ + +
Sbjct: 113 RGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRT 172
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A L +M + I VTFN ++ LC G+ A L G+ P+ +TY+ +
Sbjct: 173 EKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTI 232
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GY R + + + M G PD TY S++ G+ K
Sbjct: 233 IHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 163/340 (47%), Gaps = 10/340 (2%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF-- 206
CP + + V+ K +R+++ AM P + YN ++ CREF
Sbjct: 166 GCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP------PVAASYNAIV--LALCREFRM 217
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+ MV ++P+V+T+ ++ FC+ + +A + M GC PNVV+F L
Sbjct: 218 QEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTAL 277
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+RG F + + + ++M M+ G S+V+ IL+ GLC+ G + A ++ + G
Sbjct: 278 VRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGC 337
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L++ G+ G A+ + +++ + G P+V+ T +++ + +A
Sbjct: 338 FPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKS 397
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L++KML E P++VTFN L+ LCD R A + G P+G TY+ L+ G
Sbjct: 398 LIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLF 457
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE + ++V EM G L TYN+ + GL R S
Sbjct: 458 REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 497
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 19/347 (5%)
Query: 65 TNNQITPSSLLHFLKSKLHHHPQFTHYDFHIF-AWASTIDSFRHDHTTFLFIVRSLASSY 123
T N +T ++L+ L H + + + WA + S+ ++R L S
Sbjct: 268 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYN-------ILIRGLCSVG 320
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
S+LN + + C P + R + ++ F KA + + + M +
Sbjct: 321 DLKGASSILNSMEQHGCF---------PNV-RTYSTLIDGFSKAGDLGGAISIWNDMSR- 369
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
+P+V +Y +++ F K F++A D+M+ + P+ VTFN LI C ++
Sbjct: 370 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 429
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
ALG+F EMR GC PN ++N LI G F E + ++M EM G E S VT +V
Sbjct: 430 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVS 489
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC +A V +G+ P F + ++ C EG +A ++ +
Sbjct: 490 GLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHR 549
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++ T L+ L K V+A + KML EGI P++VT+N L+ +
Sbjct: 550 NILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 3/335 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE 205
I C F V R++D L + M + +G PS YN+LI G +
Sbjct: 264 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM--VAEGWAPSTVSYNILIRGLCSVGD 321
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A + M + P+V T++ LI GF + A+ ++ +M GC PNVV +
Sbjct: 322 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 381
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++ F + F++ ++ +M+ C ++VT L+ LC+ RV +A + + R G
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 441
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P Y L+ L EGN G AL +V E+ G S++ T++ GL + R EA
Sbjct: 442 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 501
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ KM+ +GI P++ TF+ ++ C G A + + + + Y IL++
Sbjct: 502 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 561
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ + + +ML EG P+ T+N + G+
Sbjct: 562 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 22/373 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ IV L R E VL + P + ++ V A +
Sbjct: 170 DDVTYATIVSVLCKLDRLDEATEVLAAM---------------PPVAASYNAIVLALCRE 214
Query: 168 NRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
RM + F + ++ GR P+V Y +++ F K E A RMV P+
Sbjct: 215 FRMQE---VFSVVSDMV-GRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPN 270
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVTF L+ G + + AL ++R M +G P+ VS+N LIRG ++
Sbjct: 271 VVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILN 330
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M + GC + T L+DG G + A + D SR G P Y +V+ C +
Sbjct: 331 SMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL 390
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A ++D++ + P+ + TLI L R+ A G+ +M + G +P+ T+N
Sbjct: 391 MFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYN 450
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ L G DA + + G++ +TY+ +VSG + +E V +M+ +
Sbjct: 451 ELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQ 510
Query: 465 GFIPDLATYNSYM 477
G P+ T+++ +
Sbjct: 511 GIQPNAFTFSAII 523
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 142/357 (39%), Gaps = 24/357 (6%)
Query: 134 FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV-SI 192
A P P G + R AV A ++ LA + MR + G P
Sbjct: 40 LCGAGPPPAPGTG-----DAARAHEAAVRRLAAAGDVDGVQLALQEMR--LRGVPCTEGA 92
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRD-------RVK----PDVVTFNILISGFCRNKKF 241
+ F + D+AL + R V D R P C+N +
Sbjct: 93 LVAAVGAFARAGAPDRALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRV 152
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
A + EM KGC P+ V++ T++ + DE + M + ++++
Sbjct: 153 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAI----- 207
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
V LC E R+ + +V D RG+ P Y +V+ C G +A ++ + G
Sbjct: 208 VLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGC 267
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V+ T L+ GL + +A + M+ EG P +V++N L+ LC VG A
Sbjct: 268 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASS 327
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ G P+ TY L+ G+++ ++ N+M G P++ Y + +D
Sbjct: 328 ILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 384
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-------------------GEG 344
LC RV A +++ + +R+G P D Y +V LC
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASY 204
Query: 345 NAGI-----------ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
NA + VV ++ +G P+VI TT+++ + + A ++ +M+
Sbjct: 205 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI 264
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P+ VTF L+ L D GR DA + +G P ++Y+IL+ G K
Sbjct: 265 TGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKG 324
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++N M G P++ TY++ +DG S A
Sbjct: 325 ASSILNSMEQHGCFPNVRTYSTLIDGFSKA 354
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 145/297 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y LI+GF K + A F+ M + PDV+T+ +ISGFC+ A L
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG P+ V+F LI G+ + + MI+ GC + VT L+DGLC
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + A EL+ + + G+ P F Y +V LC GN A+++V E G +
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + + +A ++++ML +G+ P VTFN L+ C G D ++L
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ T++ LV Y N K + +M G PD TY + + G AR
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 1088
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y +I+GF + + +A + M ++PD VTF LI+G+C+ A
Sbjct: 824 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M + GC+PNVV++ TLI G E D + +EM ++G + + T +V+G
Sbjct: 884 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 943
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC G + +A +LV +F G+ Y L++ C G A E++ E+ KG P+
Sbjct: 944 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 1003
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ L+ G + L+ ML +GI P++ TFN L++ C A +
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G+ PDG TY LV G+ + KE L EM +GF ++TY+ + G +
Sbjct: 1064 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123
Query: 485 K 485
K
Sbjct: 1124 K 1124
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 1/319 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ VN + + ++ E M++ +P+ IY +I + + +A + M
Sbjct: 727 YSTVVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 785
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R + PD V + LI GFC+ A F EM + P+V+++ +I GF
Sbjct: 786 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 845
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + +EM G E SVT L++G C G + A + + G P Y L
Sbjct: 846 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 905
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC EG+ A E++ E+WK G P++ +++ GL + EA L+ + G+
Sbjct: 906 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 965
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D+VT+ L++ C G A + KGL P +T+++L++G+ ++GE
Sbjct: 966 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1025
Query: 457 LVNEMLDEGFIPDLATYNS 475
L+N ML +G P+ T+NS
Sbjct: 1026 LLNWMLAKGIAPNATTFNS 1044
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ ++NG+ + E DK + M R +KP+ + +I CR K A
Sbjct: 722 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +G P+ V + TLI GF YEM +T ++ G C
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +++A +L + +G+ P + L+ C G+ A V + + + G P+V+
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+GL + A+ L+ +M K G+ P+ T+N ++ LC G +A +L
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL+ D +TY L+ Y + + + ++ EML +G P + T+N M+G
Sbjct: 962 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 4/262 (1%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVN 281
+V ++NI+I C+ + A L M KG P+V+S++T++ G+ FGE D+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE--LDKVWK 745
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ M G + +S ++ LC ++ +A E + R+G+LP Y L++ C
Sbjct: 746 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ A + E+ + P V+ T +I G ++ VEA L +M +G+ PDSV
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L+ C G DA R+ G P+ +TY L+ G +E L++EM
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 462 LDEGFIPDLATYNSYMDGLSNA 483
G P++ TYNS ++GL +
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKS 947
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN-KKFDLALGLFRE 250
+++V V +A +++M+ + V + N+ ++ ++ K A+ +FRE
Sbjct: 620 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 679
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
E G NV S+N +I + E ++ M G ++ +V+G C G
Sbjct: 680 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 739
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ K +L+ R+G+ P + Y ++ LC A E E+ ++G LP + TT
Sbjct: 740 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G + AS +M I PD +T+ ++ C +G V+A +L KG
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+PD +T+ L++GY + K+ + N M+ G P++ TY + +DGL
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN ++NG K ++A+ + D VT+ L+ +C++ + D A
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +EM KG P +V+FN L+ GF ++G + M+ G ++ T LV C
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ A + D RGV P Y LV+ C N A + E+ KG SV
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 1110
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ LI+G + +K +EA + ++M +EG+ D F+
Sbjct: 1111 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + KA M D AF +I P+V Y LI+G K + D A M +
Sbjct: 871 INGYCKAGHMKD---AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++P++ T+N +++G C++ + A+ L E G N + V++ TL+ + + D+
Sbjct: 928 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+ G + + VT +L++G C G + +L+ +G+ P + LV+
Sbjct: 988 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 1047
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C N A+ + + M G+ P
Sbjct: 1048 QYCIRNNLK-----------------------------------AATAIYKDMCSRGVGP 1072
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+ L++ C +A L KG TY +L+ G+ + + E +
Sbjct: 1073 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 1132
Query: 459 NEMLDEGFIPDLATYNSYMD 478
++M EG D ++ + D
Sbjct: 1133 DQMRREGLAADKEIFDFFSD 1152
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E E+G ++ + I++ +C GR+ +A L++ +G P Y +V C G
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
++++ + +KG P+ ++I L R+ K EA +M+++GILPD+V +
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G A + ++ + PD +TY ++SG+ + E L +EM +
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858
Query: 465 GFIPDLATYNSYMDGLSNA 483
G PD T+ ++G A
Sbjct: 859 GLEPDSVTFTELINGYCKA 877
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N+ VK + + L A A+ K + R P Y L+ G K R +A + M
Sbjct: 1043 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 1102
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V T+++LI GF + KKF A +F +MR +G + F+ FF + K+
Sbjct: 1103 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD-----FFSDTKY 1155
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 184/391 (47%), Gaps = 12/391 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA +RHD + +++ L+ + + GI PE
Sbjct: 123 FYWAGRQWRYRHDPIVYYMMLQVLSKT-------KLCQGARRVLRLMVRRGIARRPE--- 172
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + ++ +A ++ + + M+K P++ I N I+ V + +KAL F +R
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQK-AGVEPNLLICNTAIHVLVMANKLEKALRFLER 231
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VVT+N LI G+C + + A+ L EM KGC P+ VS+ T++ +++
Sbjct: 232 MQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKR 291
Query: 276 FDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E N+ +M++ F VT LV L G +A E + + RG Y
Sbjct: 292 IKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYS 351
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V C +G A E+V+E+ KG P V+ T ++ GL ++ K EA ++++M K
Sbjct: 352 AIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKH 411
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++V++ LL LC G +++A + + P+ +TY +++ G RE + E
Sbjct: 412 GCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEA 471
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++V EML +GF P N + L +K
Sbjct: 472 CDVVREMLTKGFFPTPVEINLLIKSLCLEQK 502
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL----- 210
I + A++ V AN++ L E M +L+ P+V YN LI G+ + + A+
Sbjct: 208 ICNTAIHVLVMANKLEKALRFLERM-QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAE 266
Query: 211 -----------------GF-------------YDRMVRD-RVKPDVVTFNILISGFCRNK 239
GF ++MV+D ++ PD VT+N L+ ++
Sbjct: 267 MPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHG 326
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL RE E+G + V ++ ++ F + + D + EMI GC VT
Sbjct: 327 HADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYT 386
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+V+GLC G+V +A +++ + G P Y L+ LC GN+ A E+++ +
Sbjct: 387 AVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEED 446
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
P+ I + ++ GLRR K EA ++ +ML +G P V N L++ LC + +A
Sbjct: 447 WWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEA 506
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +G + + + ++ G+ + + +L+++M PD T+ + +D
Sbjct: 507 KKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDA 566
Query: 480 L 480
L
Sbjct: 567 L 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+ ++N F D+A + M+ PDVVT+ +++G C+ K + A + ++M
Sbjct: 350 YSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMY 409
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ GC PN VS+ L+ G E M E +++T +++ GL EG++
Sbjct: 410 KHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLS 469
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+AC++V + +G P + L++ LC E A + ++E +G + + TT+I
Sbjct: 470 EACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVI 529
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + A L++ M PD+VTF +++ L GR +A + KGLD
Sbjct: 530 HGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLD 589
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
P +TY ++ Y + R +E L+ +ML YN ++ L N
Sbjct: 590 PTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCR--TAYNQVIEKLCN 637
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 38/349 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ VN+F RM+ A E + ++I P V Y ++NG K + ++A
Sbjct: 350 YSAIVNSFCMQGRMDR---AKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQ 406
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M + KP+ V++ L++G C++ A + E PN ++++ ++ G E
Sbjct: 407 QMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREG 466
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E ++ EM+ G + V +L+ LC E ++ +A + + + RG ++
Sbjct: 467 KLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFT 526
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C N AL ++D+++ P + T +I+ L + + EA+ KMLK+
Sbjct: 527 TVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKK 586
Query: 395 GILPDSVT---------------------------------FNCLLEDLCDVGRTVDADR 421
G+ P VT +N ++E LC+ G AD+
Sbjct: 587 GLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADK 646
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
+ L D T H+L+ Y + + M D IPDL
Sbjct: 647 VVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDL 695
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 153/299 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY ++I GF + AL D MV PDVVT+N L++G C+ ++ A GL
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMRE+G P++ +F TLI G+ E K D+ + + M+ VT L+DG+C
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + KA +L D R + P Y L++ C +G A +DE+ KG LP+++
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++I+G R + ++KM+ + PD +T+N L+ + DA +L +
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + PD +TY++L++G++ +E + +M +G PD TY S ++G A S
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + F +A M+D L + M P V YN L+NG K R A G +
Sbjct: 18 IYTMVIGGFCRAGLMSDALRVRDEMVG-CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 76
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD+ TF LI G+C K D AL LF M + P++V++NTLI G +
Sbjct: 77 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ ++ +M + VT IL+D C +G+V A + + +G+LP Y
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C GN + + ++ P +I TLI G + K +A L+ M KE
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD VT+N L+ G +A + KG++PD TY +++G+ KE
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316
Query: 456 NLVNEMLDEGFIPD 469
L +EML GF PD
Sbjct: 317 QLHDEMLQRGFAPD 330
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 117/235 (49%)
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ REMR G P+ V + +I GF + + + EM+ GC VT L++G
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC E R+L A L+ + RGV P + L+ C EG AL++ D + + P
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ TLI+G+ R +A+ L + M I P+ VT++ L++ C+ G+ DA
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P+ MTY+ ++ GY R +G+ + +M+ PDL TYN+ + G
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I G+ + K F +M+ ++V PD++T+N LI G+ + K A L
Sbjct: 189 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++ P+VV++N LI GF E + +M G E T +++G
Sbjct: 249 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 308
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
G +A +L + +RG P D
Sbjct: 309 AGNSKEAFQLHDEMLQRGFAPDD 331
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%)
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G +P + T +I G R +A + ++M+ G LPD VT+N LL LC R +DA
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L +G+ PD T+ L+ GY E + + L + ML++ PD+ TYN+ +DG
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 480 L 480
+
Sbjct: 131 M 131
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL PDG+ Y +++ G+ R + + +EM+ G +PD+ TYN+ ++GL R+
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 154/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LI G + +A+ DRMV + +PDVVT+N +++G CR+ LAL L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E+ +V +++T+I + D +++ EM G + S VT LV GLC
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ L+ D R ++P + L++ EG A E+ E+ +G P++I
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G + EA+ +++ M++ PD VTF L++ C V R D ++ S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL + +TY ILV G+ + + K E L EM+ G +PD+ TY +DGL + K
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 168/331 (50%), Gaps = 5/331 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V KA + NDG L + M R+++ P+V +NVL++ FVK + +A Y
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+++T+N L+ G+C + A + M C+P++V+F +LI+G+ +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + + + G ++VT ILV G C G++ A EL + GVLP Y
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G ALE+ ++L K ++ TT+IEG+ + K +A L + +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ ++ LC G +A+ L G P+ TY+ L+ + R+
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM GF D ++ +D L +A K
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 5/313 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ +D + F+ M I RP S+ ++ + + ++F+ L F ++ + + ++
Sbjct: 68 KKDDAIALFQEM---IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T NI+I+ FCR K A + ++ + G P+ +FNTLI+G F E K E V + M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E GC+ VT +V+G+C G A +L+ R V F Y +++ LC +G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A+ + E+ KG SV+ +L+ GL + K + + L++ M+ I+P+ +TFN L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L+ G+ +A+ L T+G+ P+ +TY+ L+ GY +NR E N+++ M+
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 467 IPDLATYNSYMDG 479
PD+ T+ S + G
Sbjct: 365 SPDIVTFTSLIKG 377
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ SV YN L+ G K +++ MV + P+V+TFN+L+ F + K A
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM +G +PN++++NTL+ G+ + + E NM M+ C VT L+ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
RV ++ + S+RG++ Y LV+ C G +A E+ E+ G LP V+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++GL K +A + E + K + V + ++E +C G+ DA L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
KG+ P+ MTY +++SG ++ E L+ +M ++G P+ TYN+ +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN ++NG + + AL +M VK DV T++ +I CR+ D A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG +VV++N+L+RG K+++G + +M+ + +T +L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++ +A EL + RG+ P Y L++ C + A ++D + + P ++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G +++ + + + K G++ ++VT++ L++ C G+ A+ L
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEG----ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G+ PD MTY IL+ G + ++ E+L +D G + Y + ++G+
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCK 485
Query: 483 ARK 485
K
Sbjct: 486 GGK 488
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 159/294 (54%), Gaps = 5/294 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV +N L+ V+ D + Y +M R +++ D+ +F ILI FC K AL
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+F TL+ G + + E +++ +++ C +T L++GLC
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL-PSVI 366
EGRV++A L+ G+ P Y V+ +C G+ AL ++ ++ + ++ P+V+
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+GL + + ++ L +M +GI P+ VT+NC++ C GR A RL
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P+ +TY+ L++ + +E + E L +EML G IP+ TYNS +DG
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 11/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I GF + A M+ ++ P+VVT+N LI+ F + KF A L
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM +G PN +++N++I GF + + D +M Y M GC T L+DG C
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 405
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ EL+ + RRG++ Y L+ C G+ AL++ ++ G P ++
Sbjct: 406 AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465
Query: 368 CTTLIEGL---RRLRKGVEASGLMEKMLKE--------GILPDSVTFNCLLEDLCDVGRT 416
C TL++GL +L+ +E M+K + G+ PD +T+N L+ L + G+
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 525
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
++A+ L +G+ PD +TY ++ G +++R E + M + F P++ T+N+
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585
Query: 477 MDGLSNARK 485
++G A +
Sbjct: 586 INGYCKAGR 594
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 46/339 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN LIN FVK +F +A YD M+ + P+ +T+N +I GFC+ + D A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM--------------------- 286
F M KGC+P+V +F TLI G+ G ++ D+G+ + +EM
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440
Query: 287 -------IELGCEFSS-------VTCEILVDGLCNEGRVLKACELVIDFSR--------- 323
++L + S VTC L+DGLC+ G++ A E+ +
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 324 --RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
GV P Y L+ L EG A E+ +E+ +G +P I +++I+GL + +
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA+ + M + P+ VTFN L+ C GR D L +G+ D + Y L
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G+ + ++ EM+ G PD T + + G
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 47/352 (13%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVR-DRVKPDVVTFNILISGFCRNKKFDLAL 245
+P Y ++G K + AL +M +KP+VV ++ +I G C++ + +
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF EM++KG PN+V++N +I GF ++ + EM+E + VT L++
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
EG+ +A EL + RG++P Y +++ C + A ++ + KG P V
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 366 IACTTLIEGL---RRLRKGVE--------------------------------ASGLMEK 390
TTLI+G +R+ G+E A L ++
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYH 439
M+ G+ PD VT N LL+ LCD G+ DA + + + +K G++PD +TY+
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
IL+ G E + E E L EM G +PD TY+S +DGL + T+
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 43/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A V+ R + + ++ M RK I R + + +LI F C + AL + +
Sbjct: 84 FNKLMGAVVRMERPDLVISLYQKMERKQI--RCDIYSFTILIKCFCSCSKLPFALSTFGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + + PDVVTF L+ G C + + AL LF ++ C P+V++F TL+ G E +
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGR 197
Query: 276 FDEGVNMAYEMIELGCEFSSVT--------CEI--------------------------- 300
E V + M+E G + +T C++
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257
Query: 301 -LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++DGLC +GR + L I+ +G+ P Y ++ C G A ++ E+ ++
Sbjct: 258 AIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER 317
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
P+V+ LI + K EA+ L ++ML GI+P+++T+N +++ C R A
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + L +TKG PD T+ L+ GY R +G L++EM G + + TYN+ + G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 480 L 480
Sbjct: 438 F 438
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 16/264 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ + A R++DG+ M R L+ + YN LI+GF + + AL
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLV---ANTVTYNTLIHGFCLVGDLNAALDLSQ 452
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-----------GCNPNVVSF 263
+M+ V PD+VT N L+ G C N K AL +F+ M++ G P+V+++
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI G E KF E + EM G ++T ++DGLC + R+ +A ++ +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P + L+ C G LE+ E+ ++G + I TLI G R++
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 384 ASGLMEKMLKEGILPDSVTFNCLL 407
A + ++M+ G+ PD++T +L
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNML 656
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 11/217 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P + N L++G + AL + M + + V+PDV+T+NILI G
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L+ EM +G P+ ++++++I G + + DE M M + V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L++G C GRV EL + RRG++ Y L+ GN AL++ E+
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
G P I ++ G + A ++E + +
Sbjct: 641 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 11/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I GF + A M+ ++ P+VVT+N LI+ F + KF A L
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM +G PN +++N++I GF + + D +M Y M GC T L+DG C
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 405
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ EL+ + RRG++ Y L+ C G+ AL++ ++ G P ++
Sbjct: 406 AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465
Query: 368 CTTLIEGL---RRLRKGVEASGLMEKMLKE--------GILPDSVTFNCLLEDLCDVGRT 416
C TL++GL +L+ +E M+K + G+ PD +T+N L+ L + G+
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 525
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
++A+ L +G+ PD +TY ++ G +++R E + M + F P++ T+N+
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585
Query: 477 MDGLSNARK 485
++G A +
Sbjct: 586 INGYCKAGR 594
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 159/294 (54%), Gaps = 5/294 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV +N L+ V+ D + Y +M R +++ D+ +F ILI FC K AL
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ + G +P+VV+F TL+ G + + E +++ +++ C +T L++GLC
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL-PSVI 366
EGRV++A L+ G+ P Y V+ +C G+ AL ++ ++ + ++ P+V+
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +I+GL + + ++ L +M +GI P+ VT+NC++ C GR A RL
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P+ +TY+ L++ + +E + E L +EML G IP+ TYNS +DG
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 46/339 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN LIN FVK +F +A YD M+ + P+ +T+N +I GFC+ + D A +
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM--------------------- 286
F M KGC+P+V +F TLI G+ G ++ D+G+ + +EM
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440
Query: 287 -------IELGCEFSS-------VTCEILVDGLCNEGRVLKACELVIDFSR--------- 323
++L + S VTC L+DGLC+ G++ A E+ +
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 324 --RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
GV P Y L+ L EG A E+ +E+ +G +P I +++I+GL + +
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA+ + M + P+ VTFN L+ C GR D L +G+ D + Y L
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G+ + ++ EM+ G PD T + + G
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 47/352 (13%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVR-DRVKPDVVTFNILISGFCRNKKFDLAL 245
+P Y ++G K + AL +M +KP+VV ++ +I G C++ + +
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF EM++KG PN+V++N +I GF ++ + EM+E + VT L++
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
EG+ +A EL + RG++P Y +++ C + A ++ + KG P V
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 366 IACTTLIEGL---RRLRKGVE--------------------------------ASGLMEK 390
TTLI+G +R+ G+E A L ++
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTK----------GLDPDGMTYH 439
M+ G+ PD VT N LL+ LCD G+ DA + + + +K G++PD +TY+
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
IL+ G E + E E L EM G +PD TY+S +DGL + T+
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 43/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A V+ R + + ++ M RK I R + + +LI F C + AL + +
Sbjct: 84 FNKLMGAVVRMERPDLVISLYQKMERKQI--RCDIYSFTILIKCFCSCSKLPFALSTFGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + + PDVVTF L+ G C + + AL LF ++ C P+V++F TL+ G E +
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGR 197
Query: 276 FDEGVNMAYEMIELGCEFSSVT--------CEI--------------------------- 300
E V + M+E G + +T C++
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257
Query: 301 -LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++DGLC +GR + L I+ +G+ P Y ++ C G A ++ E+ ++
Sbjct: 258 AIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER 317
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
P+V+ LI + K EA+ L ++ML GI+P+++T+N +++ C R A
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + L +TKG PD T+ L+ GY R +G L++EM G + + TYN+ + G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 480 L 480
Sbjct: 438 F 438
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 16/264 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ + A R++DG+ M R L+ + YN LI+GF + + AL
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLV---ANTVTYNTLIHGFCLVGDLNAALDLSQ 452
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-----------GCNPNVVSF 263
+M+ V PD+VT N L+ G C N K AL +F+ M++ G P+V+++
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI G E KF E + EM G ++T ++DGLC + R+ +A ++ +
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P + L+ C G LE+ E+ ++G + I TLI G R++
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 384 ASGLMEKMLKEGILPDSVTFNCLL 407
A + ++M+ G+ PD++T +L
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNML 656
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-----------VKPDVVTFNILISGFC 236
P + N L++G + AL + M + + V+PDV+T+NILI G
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
KF A L+ EM +G P+ ++++++I G + + DE M M + V
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L++G C GRV EL + RRG++ Y L+ GN AL++ E+
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
G P I ++ G + A ++E +
Sbjct: 641 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS----IYNVLINGFVKCREFDKALGF 212
F+ +N + KA R++DGL F M GR + IY LI GF K + AL
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEM-----GRRGIVADAIIYITLIYGFRKVGNINGALDI 636
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ M+ V PD +T +++GF ++ + A+ + +++
Sbjct: 637 FQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 161/330 (48%), Gaps = 3/330 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKA 209
P + F+ + +++ ++ F+ M R+ + P+V +N L++G K + + A
Sbjct: 241 PPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVP--PTVVTFNTLMSGMCKASDLNSA 298
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M + V PDV T+ + G C+ + A+ +F EMRE+G NPN V F TLI
Sbjct: 299 NALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDA 358
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E G+ + EM G + V L +GLC + A ++V + G+ P
Sbjct: 359 HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPD 418
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ C EG +A+E+ E+ +G + TTLI GL + + V++ ++
Sbjct: 419 KVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILC 478
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M++ G+ PD+ T+ +++ C +L KG P +TY+++++G+
Sbjct: 479 EMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILG 538
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ K + L+N ML+ G PD TYN +DG
Sbjct: 539 QMKNADMLLNAMLNIGVCPDDITYNILLDG 568
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 132/272 (48%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A FY +++ V P+ FN+L+ R+ K A +F EM +G P VV+FNTL+
Sbjct: 227 EAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLM 286
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + M + G T + GLC GR+ A E+ + RGV
Sbjct: 287 SGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN 346
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + L++ C EGN LE+ E+ +G ++A L GL R+R A+ +
Sbjct: 347 PNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDI 406
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E+M G+ PD VT+ L++ C G A ++ S +G+ D +TY L+SG ++
Sbjct: 407 VEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R + E ++ EM++ G PD TY +D
Sbjct: 467 SGRSVDSERILCEMMEAGLEPDNTTYTMVIDA 498
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 4/292 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ KA R+ D + FE MR+ P+ ++ LI+ K L + M
Sbjct: 321 MQGLCKAGRIQDAVEMFEEMRER-GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRG 379
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K D+V +N L +G CR + A + EMR G P+ V++ TLI GF E + D +
Sbjct: 380 IKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAM 439
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M EM + G VT L+ GL GR + + ++ + G+ P + Y +++
Sbjct: 440 EMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAF 499
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + +++ E+ KG P V+ ++ G L + A L+ ML G+ PD
Sbjct: 500 CKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDD 559
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+T+N LL+ C G+ DA+ L+ S KG+ D Y L++ + ++ K
Sbjct: 560 ITYNILLDGHCKHGKVRDAEELK---SAKGMVSDFGLYTSLINEFVKKKSTK 608
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 4/250 (1%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + ++ + G P FN L+R K NM EM+ G + VT L+
Sbjct: 228 AYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMS 287
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G+C + A L ++ GV P + Y ++ LC G A+E+ +E+ ++G P
Sbjct: 288 GMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNP 347
Query: 364 SVIACTTLIEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+ + TTLI+ ++G A+G L +M GI D V +N L LC V A+
Sbjct: 348 NTVVFTTLIDA--HCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAND 405
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ GL PD +TY L+ G+ +E + EM DEG D TY + + GLS
Sbjct: 406 IVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLS 465
Query: 482 NARKSVRQTR 491
+ +SV R
Sbjct: 466 KSGRSVDSER 475
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ RL EA ++L G+ P++ FN L+ D+ G+ A + +G+ P
Sbjct: 219 MNRLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPT 278
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+T++ L+SG + + L M G PD+ TY ++M GL A +
Sbjct: 279 VVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGR 329
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 154/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LING + KA+ DRMV + +PD+VT+N +++G CR+ LA +
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E+ +V +++T+I + D +++ EM G + S VT LV GLC
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ L+ D R ++P + L++ EG A E+ E+ +G P++I
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G + EA+ +++ M++ PD VTF L++ C V R D ++ S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL + +TY ILV G+ + + K E L EM+ G +PD+ TY +DGL + K
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V KA + NDG L + M R+++ P+V +NVL++ FVK + +A Y
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+++T+N L+ G+C + A + M C+P++V+F +LI+G+ +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + + + G ++VT ILV G C G++ A EL + GVLP Y
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G ALE+ ++L K ++ TT+IEG+ + K +A L + +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ ++ LC G +A+ L G P+ TY+ L+ + R+
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM GF D ++ +D L
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDML 588
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 159/312 (50%), Gaps = 2/312 (0%)
Query: 176 AFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +++I RP + ++ + + ++F+ L F ++ + + ++ T NI+I+
Sbjct: 72 AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FCR K A + ++ + G P+ +FNTLI G E K + V + M+E GC+
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQP 191
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT +V+G+C G A +++ R V F Y +++ LC +G A+ +
Sbjct: 192 DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG SV+ +L+ GL + K + + L++ M+ I+P+ +TFN LL+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ +A+ L T+G+ P+ +TY+ L+ GY +NR E N+++ M+ PD+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 474 NSYMDGLSNARK 485
S + G ++
Sbjct: 372 TSLIKGYCMVKR 383
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ SV YN L+ G K +++ MV + P+V+TFN+L+ F + K A
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM +G +PN++++NTL+ G+ + + E NM M+ C VT L+ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
RV ++ + S+RG++ Y LV+ C G +A E+ E+ G LP V+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++GL K +A + E + K + V + ++E +C G+ DA L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
KG+ P+ MTY +++SG ++ E L+ +M ++G P+ TYN+ +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 154/305 (50%), Gaps = 12/305 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGF--YDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+P + YN ++NG CR D +L F +M VK DV T++ +I CR+ D A
Sbjct: 190 QPDMVTYNSIVNGI--CRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ LF+EM KG +VV++N+L+RG K+++G + +M+ + +T +L+D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
EG++ +A EL + RG+ P Y L++ C + A ++D + + P
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ T+LI+G +++ + + + K G++ ++VT++ L++ C G+ A+ L
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEG----ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G+ PD MTY IL+ G + ++ E+L +D G + Y + ++G+
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGM 483
Query: 481 SNARK 485
K
Sbjct: 484 CKGGK 488
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D A+ + M+R R P +V F+ S R K+F+L L +++ G N+ + N +
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I F K AY ++ G+V+K G
Sbjct: 130 INCFCRCCK----TCFAYSVL---------------------GKVMKL----------GY 154
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + L+ LC EG A+ +VD + + G P ++ +++ G+ R A
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
++ KM + + D T++ +++ LC G A L TKG+ +TY+ LV G
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ + +G L+ +M+ +P++ T+N +D
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N + + R+++ + + M + G +P+ +N LI+G + +A+ DRMV
Sbjct: 158 LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+PD+VT+ ++++G C+ DLA L +M + P V+ +NT+I G + D+
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+N+ EM G + VT L+ LCN GR A L+ D R + P F + L++
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG A ++ DE+ K+ PS++ ++LI G + EA + E M+ + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+N L++ C R + + S +GL + +TY+IL+ G + + +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM+ +G P++ TYN+ +DGL
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGL 476
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGI--RPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDV TF+ LI F + K A L+ EM ++ +P++V++++LI GF
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M+ C VT L+ G C RV + E+ + S+RG++ Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A E+ E+ G P+++ TL++GL + K +A + E + +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ YN+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNT 576
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 169/330 (51%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K N+ + + E M+ L G P + Y++LIN F + + AL +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNL--GIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P++VT + L++G+C +K+ A+ L +M G PN V+FNTLI G F K
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + M+ GC+ VT ++V+GLC G A L+ + + P Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC + AL + E+ KG P+V+ ++LI L + +AS L+ M++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD TF+ L++ G+ V+A++L + +DP +TY L++G+ +R E +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + PD+ TYN+ + G ++
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V ++ LI+ FVK + +A YD MV+ + P +VT++ LI+GFC + + D A +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ +EG+ + EM + G ++VT IL+ GL
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A E+ + GV P Y L++ LC G A+ V + L + P++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ PD V +N ++ C G +AD L
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ Y+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 5/314 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++D + F M K RP SI ++ L++ K +FD + ++M + +
Sbjct: 61 KLDDAVALFGEMVK---SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ILI+ FCR + LAL + +M + G PN+V+ ++L+ G+ ++ E V + +M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + ++VT L+ GL + +A L+ +G P Y +V LC G+
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+A +++++ + P V+ T+I+GL + + +A L ++M +GI P+ VT++ L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ GR DA RL + ++PD T+ L+ + +E + E E L +EM+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 467 IPDLATYNSYMDGL 480
P + TY+S ++G
Sbjct: 358 DPSIVTYSSLINGF 371
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 142/311 (45%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
R+ G+ S L + + D A+ + MV+ R P ++ F+ L+S + K
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK 96
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
FD+ + L +M+ G N +++ LI F + + + +M++LG E + VT
Sbjct: 97 FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C+ R+ +A LV G P + L+ L A A+ ++D + KG
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P ++ ++ GL + A L+ KM + + P + +N +++ LC DA
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L TKG+ P+ +TY L+S R + L+++M++ PD+ T+++ +D
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 481 SNARKSVRQTR 491
K V +
Sbjct: 337 VKEGKLVEAEK 347
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F + L +P V YN +I+GF + ++A + M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ +N LI R+ + + L +EMR G
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 161/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D F M K I +P V YN LI+ + A
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGI--KPDVFTYNSLISCLCNYGRWSDASRLLS 315
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTFN LI F + K A LF EM ++ +PN+V++N+LI GF
Sbjct: 316 DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 375
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE + M+ C VT L+ G C RV + EL + S+RG++ Y
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A ++ ++ G P +I + L++GL + K +A + E + K
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P+ T+N ++E +C G+ D L S KG+ P+ + Y ++SG+ R+ ++E
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +PD YN+
Sbjct: 556 DALFREMKEDGTLPDSGCYNT 576
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 198/439 (45%), Gaps = 17/439 (3%)
Query: 55 RFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLF 114
RF+ L+ N SL F + T YD+ + + + D LF
Sbjct: 13 RFVHRSLVVRGNAATVSPSLSFFWRRAFSGK---TSYDYREKLSRNGLSELKLDDAVALF 69
Query: 115 --IVRS--LASSYRFSELHSVLNFISANPCPCS------NDGIFSCPEMERIFHFAVNAF 164
+V+S S FS+L S + ++ S N GI P + +N F
Sbjct: 70 GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI---PHNHYTYSILLNCF 126
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ +++ L M KL P + + L+NG+ + +A+ D+MV KPD
Sbjct: 127 CRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPD 185
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VTFN LI G + K A+ L M +GC P++ ++ T++ G D +++
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 245
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M + E + V ++DGLC + A +L +G+ P F Y L+ LC G
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A ++ ++ ++ P+V+ +LI+ + K +EA L ++M++ I P+ VT+N
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ C R +A ++ L +K PD +TY+ L+ G+ + R +EG L EM
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425
Query: 465 GFIPDLATYNSYMDGLSNA 483
G + + TYN+ + GL A
Sbjct: 426 GLVGNTVTYNTLIQGLFQA 444
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 170/330 (51%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K N+ + + E M+ L G P + Y++L+N F + + AL +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNL--GIPHNHYTYSILLNCFCRRSQLPLALAVLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +PD+VT + L++G+C K+ A+ L +M E G P+ V+FNTLI G F K
Sbjct: 142 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + M+ GC+ T +V+GLC G + A L+ + + Y
Sbjct: 202 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNT 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC + A ++ +++ KG P V +LI L + +AS L+ M++
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P+ VTFN L++ G+ ++A++L + +DP+ +TY+ L++G+ +R E +
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + +PD+ TYN+ + G A++
Sbjct: 382 QIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N LI+ F K + +A +D M++ + P++VT+N LI+GFC + + D A +
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ +EG+ + EM + G ++VT L+ GL
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A ++ GV P Y L++ LC G AL V + L K P++
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + + ++ C G +AD L
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD Y+ L+ R+ + L+ EM GF+ D +T + ++ L + R
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 620
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R+++ + + M ++ +P +N LI+G + +A+ DRMV
Sbjct: 158 LNGYCHGKRISEAVALVDQMVEM-GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG 216
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+ T+ +++G C+ DLAL L ++M + NVV +NT+I G + D+
Sbjct: 217 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M G + T L+ LCN GR A L+ D R + P + L++
Sbjct: 277 DLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAF 336
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ ++ P+++ +LI G + EA + M+ + LPD
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 396
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY+ L+ G + + + +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G PD+ TY+ +DGL
Sbjct: 457 MVSDGVPPDIITYSILLDGL 476
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 148/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ +VV +N +I G C+ K D A
Sbjct: 218 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFD 277
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M KG P+V ++N+LI ++ + + +MIE + VT L+D
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P Y L+ C A ++ + K LP V+
Sbjct: 338 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 397
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ E L +M + G++ ++VT+N L++ L G A ++
Sbjct: 398 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 457
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD +TY IL+ G + + ++ + + P++ TYN ++G+ A K
Sbjct: 458 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 5/258 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F +R+++ F M D P V YN LI GF K + ++ + + M
Sbjct: 364 YNSLINGFCMHDRLDEAQQIFTLMVSK-DCLPDVVTYNTLIKGFCKAKRVEEGMELFREM 422
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + + VT+N LI G + D+A +F++M G P++++++ L+ G K
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 482
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + + + + E + T I+++G+C G+V +L S +GV P Y +
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 542
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG--LMEKMLKE 394
+ C +G A + E+ + G LP TLI RLR G +A+ L+++M
Sbjct: 543 ISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAELIKEMRSC 600
Query: 395 GILPDSVTFNCLLEDLCD 412
G + D+ T + ++ L D
Sbjct: 601 GFVGDASTISMVINMLHD 618
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 155/307 (50%), Gaps = 4/307 (1%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +R+ +DG+ P+V +YN +I+ K + ++A Y MV + PDVVT+N LI
Sbjct: 196 ALQLLRR-VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SGFC K A LF +M + NPNV +FN L+ GF ER+ E N+ M++ G +
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
T L+D C V KA + S+RGV P Y ++ C A+ +
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL 374
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ +P V+ +LI+GL +L K A L+++M G+ D +T+N +L+ LC
Sbjct: 375 FKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCK 434
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L +G+ PD TY LV G + R ++ + ++L +G+I D+
Sbjct: 435 NHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNI 494
Query: 473 YNSYMDG 479
Y + + G
Sbjct: 495 YTAMIQG 501
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 153/288 (53%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K + AL R+ V+P+VV +N +I C+ K + A L+ EM
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +P+VV++N LI GF K + ++ +MI + T ILVDG C E R+
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ ++G+ P F Y L+++ C A + + + ++G P++ + + +I
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++K EA L ++M I+PD VT+N L++ LC +G+ A +L +G+
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 419
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ ++ + ++ + L+ +M DEG PD+ TY + +DGL
Sbjct: 420 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGL 467
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 1/310 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F +M D F M + P+V +N+L++GF K R +A M
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMI-FENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +KPDV T+N L+ +C K+ + A +F + ++G NPN+ S++ +I GF +K
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE +N+ EM VT L+DGLC G++ A +LV + RGV Y +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC A+ ++ ++ +G P + TTL++GL + + +A + E +L +G
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ D + +++ C G ++ L G P+ +TY I++ ++ + E
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEK 548
Query: 457 LVNEMLDEGF 466
L+ EM+ G
Sbjct: 549 LLREMITRGL 558
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 41/332 (12%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+PS+ + ++ VK + + + +M + + D+V +ILI+ F + + L+
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ ++ + G PNV++ TLI+G + + + + +++ LG + V+ L++GLC
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ A +L+ + V P Y +++ +C A ++ E+ KG P V+
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 367 ACTTLIEGL--------------------------------------RRLRKGVEASGLM 388
LI G RRL+ EA ++
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK---EAKNVL 305
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
M+K+GI PD T+N L++ C V A + S +G++P+ +Y I++ G+ +
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ E NL EM IPD+ TYNS +DGL
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 116/248 (46%)
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ K +L R + +K P++ F ++ + V++ +M G V
Sbjct: 50 DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
IL++ G+ + ++ + G P L++ LC +G AL+ D++
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G + ++ TLI GL ++ + A L+ ++ + + P+ V +N +++ +C V
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A L +KG+ PD +TY+ L+SG+ + K+ +L N+M+ E P++ T+N +
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Query: 478 DGLSNARK 485
DG R+
Sbjct: 290 DGFCKERR 297
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 187/392 (47%), Gaps = 11/392 (2%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + FSE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+ I+ F+ + A++++ + D + + R+ P + VL +K
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL-EHLMK 119
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ F GFY+ ++ + FNIL+ FC++ +A +F + + G P+VVS
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ G+ DEG + M+ G + T +L++GLC E ++ A EL +
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G++P + L++ C +G +A+E+ + + LP +I TLI GL +
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ L+++M+ +G+ PD +T+ L++ C G A R + + D + Y L+
Sbjct: 300 QANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
SG +E R + E ++ EML G PD TY
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYT 391
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D A+ Y R
Sbjct: 215 YSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKR 272
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGD 332
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 333 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTM 392
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ ++ E+ + G++PSV+ L+ G
Sbjct: 393 IINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ ++ R
Sbjct: 208 VQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ ML + +PDL TYN+ + GL
Sbjct: 268 EIYKRMLSQSLLPDLITYNTLIYGL 292
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R RE + ++ + F
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWG 128
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L++EM
Sbjct: 249 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 462 LDEGFIPDLATYNSYMDG 479
+ +G PD TY + +DG
Sbjct: 309 VMKGLKPDKITYTTLIDG 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESK 227
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 146/290 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+G + + +MVR+ V PD TFNILI C+ + A G+ M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P++V++N L+ G+ E + M++ G E + +L+DG C V
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + ++P Y L++ LC G +++DE+ P V+ LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + + +EA G++ M+K+G+ P+ VT+N +++ C A + GL+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
PD + Y++L++GY + E L EM + IPD+A+YNS +DGL N
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 154/315 (48%), Gaps = 1/315 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D + F M ++ P+ S+++ L+ V+ + A+ + ++ + P + TF
Sbjct: 36 VDDAVTCFNRMVRVFPPPPT-SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFT 94
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ + A L + + G PN+V+FNT+I GF + ++ ++
Sbjct: 95 ILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ 154
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G F T L++GL G++ A L+ + + V P Y L++ LC +G A
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDA 214
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + ++ ++G L + +LI+G + + E + L+ KM++E + PD TFN L++
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC GR ++A + + S +G PD +TY+ L+ GY E L N M+ G PD
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334
Query: 470 LATYNSYMDGLSNAR 484
+ YN +DG +
Sbjct: 335 VLNYNVLIDGYCKTK 349
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 148/288 (51%), Gaps = 1/288 (0%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
R D A+ ++RMVR P F+ L+ R + A+ LF +++ KG +P++ +F
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
LI +F + ++ +++ G + + VT +++G C G + KA + +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G L F Y L+ L G AL ++ E+ K P+++ + LI+GL + +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL ++ + GIL D+VT+N L++ C VGR + +L + +DPD T++IL+
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+E R E + ++ M G PD+ TYN+ M+G +R++V + R
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC-SRENVHEAR 320
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ + +LIN + A +++ +P++VTFN +I+GFC N AL
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + +G + ++ TLI G + +++ EM + + + V L+DGLC
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V A L RG+L Y L++ C G +++ ++ ++ P
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ L + + +EA G++ M K G PD VT+N L+E C +A L
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL+PD + Y++L+ GY + E L E+ ++ +P +A+YNS +DGL N+ +
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ +N +INGF KAL F ++ D T+ LI+G +N + AL
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +EM + PN+V ++ LI G + + + + ++ E G +VT L+DG C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ GR + +L+ R V P D+ + L++ LC EG A V+ + K+G P ++
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L+EG EA L +M+K G+ PD + +N L++ C +A L
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K L P +Y+ L+ G R + L++EM PD+ TYN +D L
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDAL 415
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 163/388 (42%), Gaps = 74/388 (19%)
Query: 157 FHFAVNAFVKANRM--NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++A K R+ G+LA + R +P + YN L+ G+ +A ++
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKR---GEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RMV+ ++PDV+ +N+LI G+C+ K D A+ LF+E+ K P + S+N+LI G
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM VT IL+D LC EGR+L+A +++ ++GV P Y
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG---------------------------------- 360
+++ C N +A ++ + + K G
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504
Query: 361 NL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD------- 412
NL P + + +LI+GL L + L+++M G PD +T+N LL+ C
Sbjct: 505 NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKA 564
Query: 413 ---------------------VGRTVDADRLRLLAST------KGLDPDGMTYHILVSGY 445
V ++L++ G P+ TY IL++
Sbjct: 565 ISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL 624
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATY 473
++ E L+++M D PD T+
Sbjct: 625 CKDGSFGEAMLLLSKMEDNDRPPDAITF 652
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 36/299 (12%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YNVLI+G+ K + D+A+ + + + P + ++N LI G C + +
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKK 391
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM P+VV++N LI D LC
Sbjct: 392 LLDEMHGSAQPPDVVTYNILI-----------------------------------DALC 416
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EGR+L+A +++ ++GV P Y +++ C N +A ++ + + K G P ++
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G + EA L ++M + ++PD ++N L++ LC++GR L
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G PD +TY+IL+ + + + +L +++ EG PD T ++ +D L K
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEK 594
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 13/286 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+LI+ K +ALG M++ VKP++VT+N ++ G+C ++A +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M + G P+++++N LI G+ DE + + EM + L+DGLCN
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG--NAGIAL--EVVDELWKKGNLP 363
GR+ EL+ + G P Y L++ C + I+L ++V+ +W P
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-----P 577
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+++ L + K A ++ +L G P+ T+ L+ LC G +A +
Sbjct: 578 DFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA--ML 635
Query: 424 LLASTKGLD--PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LL+ + D PD +T+ I++ + N + E L EM+ G +
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++A K R+ + L M K +P++ YN +++G+ + A ++RM
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM 466
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ ++PD++ +N+LI+G+C+ + D A+ LF+EMR K P++ S+N+LI G +
Sbjct: 467 VKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM + G +T IL+D C KA L G+ P + +
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAI 585
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC +A + + L G P+V T LI L + EA L+ KM
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
PD++TF ++ L T A++LR +GL
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 39/207 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR--KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + K +++ ++ F+ MR LI P ++ YN LI+G D
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLI---PDIASYNSLIDGLCNLGRIPHVQELLD 534
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE--------------------- 253
M PDV+T+NIL+ FC+ + FD A+ LFR++ E
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEK 594
Query: 254 -------------KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
GC+PNV ++ LI + F E + + +M + ++T EI
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVL 327
++ L KA +L + RG++
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 34/332 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN ++NG+ K ++A + +V + PD T+ LI G+C+ K D A +
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+EM KGC N V++ LI G ER+ DE +++ +M + C + T +L+ LC
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCG 335
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R +A LV + +G+ P Y L++ LC + A E++ ++ +KG +P+VI
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395
Query: 368 CTTLIEGL------------------RRLR----------KGV------EASGLMEKMLK 393
LI G R LR KG +A G++ KML+
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLE 455
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+LPD VT+N L++ C G A RL L + +GL PD TY ++ + R +E
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEE 515
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L + + + IP++ Y + +DG A K
Sbjct: 516 ACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 156/304 (51%), Gaps = 6/304 (1%)
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
+FE KLI G YN L+N + D+ Y M+ D+V P++ T+N +++G+
Sbjct: 174 SFELKYKLIIG-----CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ + A + E G +P+ ++ +LI G+ + D + EM GC +
Sbjct: 229 CKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNE 288
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
V L+ GLC E R+ +A +L + P Y L++ LCG AL +V E
Sbjct: 289 VAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKE 348
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ +KG P++ T LI+ L K +A L+ +ML++G++P+ +T+N L+ C G
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
DA + L ++ L P+ TY+ L+ GY + N K ++N+ML+ +PD+ TYNS
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHK-AMGVLNKMLERKVLPDVVTYNS 467
Query: 476 YMDG 479
+DG
Sbjct: 468 LIDG 471
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 39/369 (10%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
C R + + A + R ++ L L E K I +P++ Y VLI+ + +K
Sbjct: 319 CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGI--KPNIHTYTVLIDSLCSQCKLEK 376
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A +M+ + P+V+T+N LI+G+C+ + AL + M + PN ++N LI+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK 436
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ +R + + + +M+E VT L+DG C G A L+ + RG++P
Sbjct: 437 GYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ Y +++ LC A ++ D L +K +P+V+ T LI+G + K EA ++
Sbjct: 496 DPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLML 555
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGR------------------TVDADRL---RLLAS 427
EKML + LP+S+TFN L+ LC G+ TV D + RLL
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKD 615
Query: 428 --------------TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ G PD TY + Y RE R ++ E++V +M + G PDL TY
Sbjct: 616 GDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY 675
Query: 474 NSYMDGLSN 482
+S + G +
Sbjct: 676 SSLIKGYGD 684
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 2/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + K + D L E M + RP+ YN LI G+ K R KA+G ++M
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESR-NLRPNTRTYNELIKGYCK-RNVHKAMGVLNKM 453
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +V PDVVT+N LI G CR+ FD A L M ++G P+ ++ ++I ++
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E ++ + + + V L+DG C G+V +A ++ + LP + L
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G A + +++ K P+V T LI L + A ++ML G
Sbjct: 574 IHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGT 633
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+ T+ ++ C GR DA+ + G+ PD TY L+ GY R
Sbjct: 634 KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFV 693
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
++ M D G P T+ S + L
Sbjct: 694 VLKRMHDTGCEPSQHTFLSLIKHL 717
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 143/288 (49%), Gaps = 1/288 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G R D+A+ + +M D P V T+ +LI C +++ AL L +EM
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
EKG PN+ ++ LI + K ++ + +M+E G + +T L++G C G +
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A ++V R + P Y L++ C + N A+ V++++ ++ LP V+ +LI
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G R A L+ M G++PD T+ +++ LC R +A L K +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVI 529
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ + Y L+ GY + + E ++ +ML + +P+ T+N+ + GL
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 150/331 (45%), Gaps = 20/331 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K+ R+ + F+++ + D P+V +Y LI+G+ K + ++A ++M+
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQK-DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKN 562
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ +TFN LI G C + K A L +M + P V + LI + FD
Sbjct: 563 CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+M+ G + + T + C EGR+ A ++V GV P F Y L++
Sbjct: 623 RRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGY 682
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-------------- 386
G A V+ + G PS +LI+ L ++ G G
Sbjct: 683 GDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFD 742
Query: 387 ----LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHIL 441
L+EKM++ G+ P++ ++ L+ +C++G A+++ + +G+ P + ++ L
Sbjct: 743 IVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNAL 802
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+S + + E +V++M+ G +P L +
Sbjct: 803 LSCCCKLEKHNEAAKVVDDMICVGHLPQLES 833
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 57/343 (16%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ ++ + L E M K ID +P+VS +LI+ +K +FD A + +M
Sbjct: 570 FNALIHGLCTDGKLKEATLLEEKMVK-IDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF------ 270
+ KPD T+ I +CR + A + +M+E G +P++ ++++LI+G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688
Query: 271 ---------------------------------FGERK--------------FDEGVNMA 283
+G+ K FD V +
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF--SRRGVLPKDFDYFGLVEKLC 341
+M+E G ++ + E L+ G+C G L+ E V D + G+ P + + L+ C
Sbjct: 749 EKMVEHGVTPNAKSYEKLMLGICEIGN-LRVAEKVFDHMQQKEGISPSELVFNALLSCCC 807
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A +VVD++ G+LP + +C LI L + + + + + +L+ G D +
Sbjct: 808 KLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDEL 867
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ +++ + G L + G TY +L+ G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + Y++I +GC L++ L G V + ++ ++ V P + Y +
Sbjct: 172 DESFELKYKLI-IGCY------NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V C GN A + V + + G P T+LI G + + A + ++M +G
Sbjct: 225 VNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGC 284
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKEG 454
+ V + L+ LC V R +D + + L K D P TY +L+ R+ E
Sbjct: 285 RRNEVAYTHLIHGLC-VERRID-EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEA 342
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
NLV EM ++G P++ TY +D L + K
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK 373
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 161/330 (48%), Gaps = 3/330 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKA 209
P R F+ + +++ ++ F+ M R+ + +P+V +N L++G K + + A
Sbjct: 239 PPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGV--QPTVVTFNTLMSGMCKASDLNNA 296
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M + + PDV T+ I G C+ + A+ +F EM E+G NPN V TLI
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E G+ + +EM G + V LV+G C + A ++V + + G+ P
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 416
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ C EG A+E+ E+ +G + T LI GL + + V+A ++
Sbjct: 417 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 476
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M++ G+ PD+ T+ +++ C G + KG +P +TY+++++G+
Sbjct: 477 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLG 536
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ K + L+N ML+ G P+ TYN +DG
Sbjct: 537 QMKNADMLLNAMLNIGVCPNDITYNILLDG 566
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A FY ++ V P+ FN+L+ R+ K A +F EM +G P VV+FNTL+
Sbjct: 225 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 284
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + M + G T + GLC GR+ A E+ + RG+
Sbjct: 285 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P L++ C EG+ LE+ E+ +G ++A L+ G R+R A+ +
Sbjct: 345 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDI 404
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E+M K+G+ PD VT+ L++ C G A ++ S +G+ D +TY L+SG ++
Sbjct: 405 VEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSK 464
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R + E ++ EM++ G PD TY +D
Sbjct: 465 AGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 496
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 138/296 (46%), Gaps = 12/296 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR--M 216
+ K R+ D + FE M R L P+ + LI+ C+E D G R M
Sbjct: 319 IQGLCKTGRIQDAMEMFEEMCERGL---NPNTVVLTTLIDA--HCKEGDVTAGLELRWEM 373
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VK D+V +N L++GFCR + A + EMR+ G P+ V++ TLI G E +
Sbjct: 374 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGEL 433
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + M EM + G VT L+ GL GR + A ++ + G+ P + Y +
Sbjct: 434 DTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMV 493
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G+ + + E+ KG P ++ ++ G L + A L+ ML G+
Sbjct: 494 IDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGV 553
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
P+ +T+N LL+ C G+ D + L+ S KG+ D Y L++ + ++ K
Sbjct: 554 CPNDITYNILLDGHCKHGKVRDTEELK---SAKGMVSDFGVYTSLINEFVKKKSAK 606
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + + + G P FN L+R K N+ EM+ G + + VT L+
Sbjct: 226 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 285
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G+C + A L ++ G+ P + Y ++ LC G A+E+ +E+ ++G P
Sbjct: 286 GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNP 345
Query: 364 SVIACTTLIEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+ + TTLI+ ++G +G L +M G+ D V +N L+ C V A+
Sbjct: 346 NTVVLTTLIDA--HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAND 403
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ GL PD +TY L+ G +E + EM DEG D TY + + GLS
Sbjct: 404 IVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLS 463
Query: 482 NARKSVRQTR 491
A +SV R
Sbjct: 464 KAGRSVDAER 473
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 154/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LI G + +A+ DRMV + +PDVVT+N +++G CR+ LAL L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E+ +V +++T+I + D +++ EM G + S VT LV GLC
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ L+ D R ++P + L++ EG A E+ E+ +G P++I
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G + EA+ +++ M++ PD VTF L++ C V R D ++ S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL + +TY ILV G+ + + K E L EM+ G +PD+ TY +DGL + K
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 162/312 (51%), Gaps = 2/312 (0%)
Query: 176 AFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +++I RP S+ ++ + + ++F+ L F ++ + + ++ T NI+I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FCR K A + ++ + G P+ +FNTLI+G F E K E V + M+E GC+
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT +V+G+C G A +L+ R V F Y +++ LC +G A+ +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG SV+ +L+ GL + K + + L++ M+ I+P+ +TFN LL+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ +A+ L T+G+ P+ +TY+ L+ GY +NR E N+++ M+ PD+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 474 NSYMDGLSNARK 485
S + G ++
Sbjct: 372 TSLIKGYCMVKR 383
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V KA + NDG L + M R+++ P+V +NVL++ FVK + +A Y
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+++T+N L+ G+C + A + M C+P++V+F +LI+G+ +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + + + G ++VT ILV G C G++ A EL + GVLP Y
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G ALE+ ++L K ++ TT+IEG+ + K +A L + +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ ++ LC G +A+ L G P+ TY+ L+ + R+
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM GF D ++ +D L
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDML 588
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ SV YN L+ G K +++ MV + P+V+TFN+L+ F + K A
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM +G +PN++++NTL+ G+ + + E NM M+ C VT L+ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
RV ++ + S+RG++ Y LV+ C G +A E+ E+ G LP V+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++GL K +A + E + K + V + ++E +C G+ DA L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
KG+ P+ MTY +++SG ++ E L+ +M ++G P+ TYN+ +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN ++NG + + AL +M VK DV T++ +I CR+ D A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG +VV++N+L+RG K+++G + +M+ + +T +L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++ +A EL + RG+ P Y L++ C + A ++D + + P ++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G +++ + + + K G++ ++VT++ L++ C G+ A+ L
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEG----ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G+ PD MTY IL+ G + ++ E+L +D G + Y + ++G+
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCK 485
Query: 483 ARK 485
K
Sbjct: 486 GGK 488
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 35/272 (12%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D A+ + M+R R P +V F+ S R K+F+L L +++ G N+ + N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I F K ++ ++++LG E + T L+ GL EG+V +A L
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL--------- 180
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
VD + + G P V+ +++ G+ R A
Sbjct: 181 --------------------------VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+ KM + + D T++ +++ LC G A L TKG+ +TY+ LV G
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ + +G L+ +M+ +P++ T+N +D
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 150/304 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+++ Y +LI+GF K + ++A M+ + V +N LIS C++ K AL
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EM KGC P++ +FN+LI G + ++ + + +M+ G +SVT L+
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL 533
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +LV D RG + Y GL++ LC G L + +E+ +KG PS+I
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSII 593
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C LI G K A M M+ G PD VT+N L+ LC GR +A L
Sbjct: 594 TCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL 653
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+G+ PD +TY+ L+ RE + L+ ++ GF+P+ T+N + S
Sbjct: 654 QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNS 713
Query: 487 VRQT 490
QT
Sbjct: 714 EGQT 717
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 165/325 (50%), Gaps = 6/325 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF-YDR 215
+ + ++ K R+++ +A+ + G P+V +N L+NGFV+ ++A F YD+
Sbjct: 318 YGYLMHGLCKTCRIDEA----QALLSKVPG-PNVVHFNTLVNGFVRNGRLNEATAFVYDK 372
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PDV TF+ L++G C+ F AL L +M KGC PN+ ++ LI GF + +
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + EM+ G ++V L+ LC G++ +A ++ + S +G P F +
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC AL + ++ +G + + + TLI R + EA L+ ML G
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
D +T+N L++ LC G L KGL P +T +IL++G+ +
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +M+ GF PD+ TYNS ++GL
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGL 637
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 193/451 (42%), Gaps = 39/451 (8%)
Query: 47 TAHHTHLLRFLK---THLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTID 103
+AH T R LK L + N+ITP L KL P IF WA
Sbjct: 44 SAHETEWERLLKPFDLKELRRSFNKITPFQL-----CKLLELPLDVETSMEIFKWAGAQK 98
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
+ H + + ++ L ++ F + +L +GI E +F +
Sbjct: 99 GYCHSFSVYYLLIDKLGAAAGFKVIDRLL-------LQMKEEGIVF---RESLFILIMKY 148
Query: 164 FVKANRMNDGLLAFEAMRKLIDGR------PSVSIYNVLINGFV--KCREFDKALGFYDR 215
+ +A L +A R L+D + PS YNV+++ V C + FYD
Sbjct: 149 YGRAG------LPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNV-FYD- 200
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ V P+ TF +++ C + D A L R+M + GC PN + + TLI +
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + + EM +GC T ++ G C RVL+ +LV +G P D Y
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM-EKMLKE 394
L+ LC ++ L K P+V+ TL+ G R + EA+ + +KM+
Sbjct: 321 LMHGLC----KTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINN 376
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G +PD TF+ L+ LC G A L KG P+ TY IL+ G+ ++ + +E
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA 436
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ EML +GF + YN+ + L K
Sbjct: 437 GLILREMLTKGFSLNTVGYNALISALCKHGK 467
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 164/322 (50%), Gaps = 4/322 (1%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA + ++ + K RP+++ YNV+++G K F + ++RMV + ++PDV
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDV 299
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
+T+ ILI G CR+ D A ++ E+ + G + +N+L++GF + E ++
Sbjct: 300 ITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF-WD 358
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV--LPKDFDYFGLVEKLCGE 343
+ T I++ GL + G V +A EL D + V +P + L+ LC
Sbjct: 359 SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIEL-WDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A A + +E G V + +++I GL + + V+A + EKM K+G P+S +
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ C V RT DA R+ + G P +TY+ L+ G + + +E ++ EM++
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
GF PD+ TY S + GL + +K
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKK 559
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 178/413 (43%), Gaps = 74/413 (17%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKC 203
I C R + ++AFV+A R +D F ++ GR P++ YN+++
Sbjct: 112 ILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCAR 171
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D+A+ +D + R +V PD +T++ L+ G + + D AL L EM G P+VV +
Sbjct: 172 GDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCY 231
Query: 264 NTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
N L+ G F +F++ + + +++ + G + T +++DGLC GR + E+
Sbjct: 232 NALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMV 291
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE--------- 373
+ P Y L+ LC G+ A V E+ K G + +L++
Sbjct: 292 ANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQ 351
Query: 374 ------------GLRRLR------KGVEASGLMEKMLK--------EGILPDSVTFNCLL 407
GLR LR KG+ SG++++ ++ +PD+VTF L+
Sbjct: 352 EAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411
Query: 408 E-----------------------------------DLCDVGRTVDADRLRLLASTKGLD 432
LC+VGR VDA ++ G
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ Y+ L+SG+ + R + + ++M D G P + TYN+ +DGL A K
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 137/263 (52%), Gaps = 6/263 (2%)
Query: 156 IFHFA--VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+F ++ +N R+ D + +E M K DG +P+ IYN LI+GF + A+
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDK--DGCKPNSHIYNALISGFCQVYRTSDAVRI 496
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y +M + P V+T+N LI G C+ +K+ A + REM E G P++ ++ +LIRG F
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF- 331
++K D+ +++ +++ G + + IL+ GLC+ G+V +A + D + P +
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ L G A + + + G P +I+ T I+GL + E L++++
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676
Query: 392 LKEGILPDSVTFNCLLEDLCDVG 414
L GI+P +T+N L+ + G
Sbjct: 677 LSRGIIPTVITWNILVRAVIKYG 699
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 156/356 (43%), Gaps = 39/356 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ V F +A R+ + +++ G ++ YN++I G D+A+ +D
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAG--FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDL 393
Query: 216 MVRD-RVKPDVVTFNILISGFCRN-----------------KKFDL-------------- 243
+ +D PD VTF LI G C+N K+ D+
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453
Query: 244 ----ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
A+ ++ +M + GC PN +N LI GF + + V + +M + GC + +T
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+DGLC + +A + + G P Y L+ L + AL + ++ K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLLEDLCDVGRTVD 418
G V+ LI GL K EA + M K+ P+ VT+N L++ L + G
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A L + GL+PD ++Y+ + G +R EG L++E+L G IP + T+N
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 41/193 (21%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ KA + + A R++++ P ++ Y LI G ++ D AL +
Sbjct: 512 YNTLIDGLCKAEKYQE---ASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-------------------- 254
+++ +K DV+ NILI G C K D AL +F +M+EK
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628
Query: 255 ----------------GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
G P+++S+NT I+G + EG+ + E++ G + +T
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688
Query: 299 EILVDGLCNEGRV 311
ILV + G +
Sbjct: 689 NILVRAVIKYGPI 701
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 362 LPSVIACT-------TLIEGLRRLRKGVEASGLMEKM----LKEGILPDSVTFNCLLEDL 410
LPS++ C L++ R R+ +A + I P+ T+N +L L
Sbjct: 109 LPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSL 168
Query: 411 CDVGRTVDADRLRLLAST---KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C G D DR L + + + PD +TY L+ G +++R +L++EM G
Sbjct: 169 CARG---DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQ 225
Query: 468 PDLATYNSYMDGLSNA 483
PD+ YN+ + G A
Sbjct: 226 PDVVCYNALLGGCFKA 241
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + +A R+ + + + MR P V YN LI G K +A+ + RM
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAY--AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD T+N +I G+C+ A L ++ KG P+ V++ +LI G E
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + E G + V LV GLC +G +L A +++ + + G P Y +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC GN A V+++ KG LP V TLI+G + K A L+E+M + GI
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD++T+N +L LC G+ + + KG P+ +TY+IL+ + R N+ +E
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
++ +M EG PD ++N+ + G
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGF 546
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ +N +++ K + +A ++++ + ++ T+NI I G C + A+ L
Sbjct: 185 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 244
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
MR P+VV++NTLIRG + E ++ M+ GC T ++DG C
Sbjct: 245 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 303
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V +A EL+ D +G +P Y L+ LC EG+ ALE+ +E KG P ++
Sbjct: 304 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 363
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++GL + A +M +M +EG PD T+N ++ LC +G DA + A
Sbjct: 364 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 423
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG PD T++ L+ GY + + LV M + G PD TYNS ++GL A K
Sbjct: 424 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 481
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 11/333 (3%)
Query: 159 FAVNAFVKANRMNDGLL-------AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKA 209
+AV V N + GL A +R++++ P YN +I+G+ K +A
Sbjct: 251 YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEA 310
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
V PD VT+ LI+G C + AL LF E + KG P++V +N+L++G
Sbjct: 311 TELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 370
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + EM E GC T I+++GLC G + A ++ D +G LP
Sbjct: 371 LCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPD 430
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + L++ C AL++V+ +W+ G P I +++ GL + K E + +
Sbjct: 431 VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQ 490
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M+ +G P+ +T+N L+E+ C + +A ++ + S +GL PD ++++ L+ G+ R N
Sbjct: 491 EMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR-N 549
Query: 450 RRKEGENLVNEMLDE-GFIPDLATYNSYMDGLS 481
EG L+ + L+E G+ T+N+ + S
Sbjct: 550 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+ I G + +A+ D M R PDVVT+N LI G C+ A+ R M
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P+ ++NT+I G+ E + + + G VT L++GLC EG V
Sbjct: 284 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL + +G+ P Y LV+ LC +G AL+V++E+ ++G P + +I
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL ++ +A+ +M + +G LPD TFN L++ C + A +L G+
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY+ +++G + + E EM+ +G P+ TYN ++ + K
Sbjct: 464 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 516
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 131/292 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LING + ++AL ++ +KPD+V +N L+ G C AL +
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E+GC+P++ ++N +I G + + + I G T L+DG C
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ A +LV G+ P Y ++ LC G E E+ KG P+ I
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIE R K EAS ++ KM +EG+ PD+V+FN L+ C G A L
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG T++ L+ ++ + E + +EML +G D TY +DG
Sbjct: 564 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 158/356 (44%), Gaps = 33/356 (9%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ A+ +A R+ D + AFE M L P+ YN +++ V D+A Y R
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVR 111
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG----CN-------------- 257
M+ V PD+ T I + FC + +AL L R + +G C
Sbjct: 112 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 171
Query: 258 -------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
PN+ +FN ++ E + ++I+ G + T I + G
Sbjct: 172 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GR+ +A LV D R +P Y L+ LC + A+ + + +G LP
Sbjct: 232 LCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T+I+G ++ EA+ L++ + +G +PD VT+ L+ LC G A L
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
A KG+ PD + Y+ LV G + ++NEM +EG PD+ TYN ++GL
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 14/317 (4%)
Query: 174 LLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
L A + M ++ + P + YN++ING K A + + PDV TFN L
Sbjct: 378 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 437
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G+C+ K D AL L M E G P+ +++N+++ G K +E EMI GC
Sbjct: 438 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 497
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ +T IL++ C ++ +A ++++ S+ G+ P + L+ C G+ A
Sbjct: 498 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 557
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ +L +KG + TLI A + ++ML +G DS T+ L++ C
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617
Query: 412 DVGRTVDADR--LRLLASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
+T + DR + L+ K G P T+ +++ T +R + +++ M+ G +P
Sbjct: 618 ---KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Query: 469 DLATYNSYMDGLSNARK 485
++ +D + NA K
Sbjct: 675 EV------VDTILNADK 685
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ +N K ++D + ++ G P V +N LI+G+ K + D AL
Sbjct: 397 QTYNIVINGLCKMGNISDATVVMN--DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM + PD +T+N +++G C+ K + F+EM KGC+PN +++N LI F
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 514
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K +E + +M + G +V+ L+ G C G + A L +G +
Sbjct: 515 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 574
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ G+ N +A ++ DE+ KG+ LI+G + A + +M+K
Sbjct: 575 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 634
Query: 394 EGILPDSVTFNCLLEDL 410
+G +P TF ++ L
Sbjct: 635 KGFIPSMSTFGRVINSL 651
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 9/241 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N KA ++N+ F+ M ++ G P+ YN+LI F + + ++A +
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEM--ILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 526
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++ + PD V+FN LI GFCRN + A LF+++ EKG + +FNTLI F G+
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ EM+ G S T +L+DG C V +A +++ ++G +P +
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 646
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-LMEKMLKE 394
++ L A+ ++ + K G +P V+ L +K + A L+E ++K+
Sbjct: 647 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTI-----LNADKKEIAAPKILVEDLMKK 701
Query: 395 G 395
G
Sbjct: 702 G 702
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ L E M + P YN ++NG K + ++ + M
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEY-GIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 492
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ +T+NILI FCR+ K + A + +M ++G +P+ VSFNTLI GF
Sbjct: 493 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 552
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + ++ E G ++ T L+ + + A ++ + +G + Y L
Sbjct: 553 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 612
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C N A + E+ KKG +PS+ +I L + +A G++ M+K G+
Sbjct: 613 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 672
Query: 397 LPDSV 401
+P+ V
Sbjct: 673 VPEVV 677
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F ++N+M + M + +G P +N LI GF + + + A + +
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQ--EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ TFN LI F +A +F EM KG + ++ LI G
Sbjct: 562 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 621
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D EMI+ G S T +++ L RV +A ++ + GV+P+
Sbjct: 622 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE------ 675
Query: 336 LVEKLCGEGNAGIALE--VVDELWKKGNL 362
+V+ + IA +V++L KKG++
Sbjct: 676 VVDTILNADKKEIAAPKILVEDLMKKGHI 704
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 217/479 (45%), Gaps = 18/479 (3%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLH 76
SP P PA IPL S T + + ++ T L F++ + I + L+
Sbjct: 6 SPFPSPALHIPLHSH--CTKSTNINHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEA--LN 61
Query: 77 FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFIS 136
F + +P + DF + I +H +TT + +V+ + SS +LN +
Sbjct: 62 FFHTMAKMNPLPSVIDFTLLL--GFIVKMKH-YTTAISLVKEMHSSLGIKPDTFILNVVI 118
Query: 137 ANPC--PCSNDGIFSCPEMERI--------FHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
+ C G M ++ F +N + + + + K
Sbjct: 119 NSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEK-TGY 177
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R V Y VLING K + +A+G+ +M P+VV ++ ++ G C++ ALG
Sbjct: 178 RSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALG 237
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM KG PN+V++ LI+G ++ E ++ EM+++G + ILVD LC
Sbjct: 238 LCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLC 297
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A ++ G +P F Y L+++ C + A V + + +G LP ++
Sbjct: 298 KEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIV 357
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A T+LI G +++ +A L+++M+K G PD VT+ L+ C VGR + A L L
Sbjct: 358 AYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNM 417
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G P+ T I++ G + E +L + M ++ Y+ +DG+ +A K
Sbjct: 418 HKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 36/372 (9%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + +N K + ++ + M + + P+V +Y+ +++G K +ALG
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEER-NWNPNVVVYSTVMDGLCKDGLVSEALGLCL 240
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M +KP++VT+ LI G C ++ A L EM + G P++ S N L+ E
Sbjct: 241 EMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEG 300
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + ++ MI +G T L+D C + ++ +A + RG LP Y
Sbjct: 301 KIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYT 360
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C N A+ ++DE+ K G P V+ TTLI G ++ + + A L M K
Sbjct: 361 SLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKY 420
Query: 395 GILP-----------------------------------DSVTFNCLLEDLCDVGRTVDA 419
G +P + V ++ +L+ +C G+ A
Sbjct: 421 GQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTA 480
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L KGL + Y I+++G+ ++ + E+L++ M + G +PD TYN ++ G
Sbjct: 481 LELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540
Query: 480 LSNARKSVRQTR 491
L R+ R +
Sbjct: 541 LVAEREIARSIK 552
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 4/280 (1%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L+ P V YN LI+ + + D+A ++ MV PD+V + LI G+C+ K +
Sbjct: 314 LVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNIN 373
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ L EM + G P+VV++ TLI GF + + M + G + TC I++
Sbjct: 374 KAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIIL 433
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGLC + +A L + + Y +++ +C G ALE+ L KG
Sbjct: 434 DGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQ 493
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+V A T +I G + +A L+ M + G +PDS T+N ++ L + +
Sbjct: 494 INVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKY 553
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ KG D T ++++ Y N +G+N + E L
Sbjct: 554 LTMMRDKGFSVDATTTEMIIN-YLSTN---QGDNELREFL 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-GILPDSVTFNCLL 407
AL + K LPSVI T L+ + +++ A L+++M GI PD+ N ++
Sbjct: 59 ALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVI 118
Query: 408 EDLCDV-----GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
LC + G +V L+L GL+P +T+ IL++G + LV+ +
Sbjct: 119 NSLCHLKLVAFGFSVLGTMLKL-----GLEPSVVTFTILINGLCVKGDVGRAVELVDHVE 173
Query: 463 DEGFIPDLATYNSYMDGLSNARKS 486
G+ D+ TY ++GL K+
Sbjct: 174 KTGYRSDVKTYGVLINGLCKMGKT 197
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + +A R+ + + + MR P V YN LI G K +A+ + RM
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAY--AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD T+N +I G+C+ A L ++ KG P+ V++ +LI G E
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + E G + V LV GLC +G +L A +++ + + G P Y +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC GN A V+++ KG LP V TLI+G + K A L+E+M + GI
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD++T+N +L LC G+ + + KG P+ +TY+IL+ + R N+ +E
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
++ +M EG PD ++N+ + G
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGF 545
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ +N +++ K + +A ++++ + ++ T+NI I G C + A+ L
Sbjct: 184 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 243
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
MR P+VV++NTLIRG + E ++ M+ GC T ++DG C
Sbjct: 244 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 302
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V +A EL+ D +G +P Y L+ LC EG+ ALE+ +E KG P ++
Sbjct: 303 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 362
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++GL + A +M +M +EG PD T+N ++ LC +G DA + A
Sbjct: 363 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 422
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG PD T++ L+ GY + + LV M + G PD TYNS ++GL A K
Sbjct: 423 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 480
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 11/333 (3%)
Query: 159 FAVNAFVKANRMNDGLL-------AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKA 209
+AV V N + GL A +R++++ P YN +I+G+ K +A
Sbjct: 250 YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEA 309
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
V PD VT+ LI+G C + AL LF E + KG P++V +N+L++G
Sbjct: 310 TELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 369
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + EM E GC T I+++GLC G + A ++ D +G LP
Sbjct: 370 LCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPD 429
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + L++ C AL++V+ +W+ G P I +++ GL + K E + +
Sbjct: 430 VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQ 489
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M+ +G P+ +T+N L+E+ C + +A ++ + S +GL PD ++++ L+ G+ R N
Sbjct: 490 EMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR-N 548
Query: 450 RRKEGENLVNEMLDE-GFIPDLATYNSYMDGLS 481
EG L+ + L+E G+ T+N+ + S
Sbjct: 549 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+ I G + +A+ D M R PDVVT+N LI G C+ A+ R M
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P+ ++NT+I G+ E + + + G VT L++GLC EG V
Sbjct: 283 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL + +G+ P Y LV+ LC +G AL+V++E+ ++G P + +I
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL ++ +A+ +M + +G LPD TFN L++ C + A +L G+
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY+ +++G + + E EM+ +G P+ TYN ++ + K
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 515
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 131/292 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LING + ++AL ++ +KPD+V +N L+ G C AL +
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E+GC+P++ ++N +I G + + + I G T L+DG C
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ A +LV G+ P Y ++ LC G E E+ KG P+ I
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIE R K EAS ++ KM +EG+ PD+V+FN L+ C G A L
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG T++ L+ ++ + E + +EML +G D TY +DG
Sbjct: 563 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 158/356 (44%), Gaps = 33/356 (9%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ A+ +A R+ D + AFE M L P+ YN +++ V D+A Y R
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVR 110
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG----CN-------------- 257
M+ V PD+ T I + FC + +AL L R + +G C
Sbjct: 111 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 170
Query: 258 -------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
PN+ +FN ++ E + ++I+ G + T I + G
Sbjct: 171 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GR+ +A LV D R +P Y L+ LC + A+ + + +G LP
Sbjct: 231 LCEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T+I+G ++ EA+ L++ + +G +PD VT+ L+ LC G A L
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
A KG+ PD + Y+ LV G + ++NEM +EG PD+ TYN ++GL
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 10/315 (3%)
Query: 174 LLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
L A + M ++ + P + YN++ING K A + + PDV TFN L
Sbjct: 377 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 436
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G+C+ K D AL L M E G P+ +++N+++ G K +E EMI GC
Sbjct: 437 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 496
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ +T IL++ C ++ +A ++++ S+ G+ P + L+ C G+ A
Sbjct: 497 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 556
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ +L +KG + TLI A + ++ML +G DS T+ L++ C
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616
Query: 412 DVGRTVDADRLRLLASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
VD + L+ K G P T+ +++ T +R + +++ M+ G +P++
Sbjct: 617 KTA-NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675
Query: 471 ATYNSYMDGLSNARK 485
+D + NA K
Sbjct: 676 ------VDTILNADK 684
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ +N K ++D + ++ G P V +N LI+G+ K + D AL
Sbjct: 396 QTYNIVINGLCKMGNISDATVVMN--DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM + PD +T+N +++G C+ K + F+EM KGC+PN +++N LI F
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 513
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K +E + +M + G +V+ L+ G C G + A L +G +
Sbjct: 514 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 573
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ G+ N +A ++ DE+ KG+ LI+G + A + +M+K
Sbjct: 574 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 633
Query: 394 EGILPDSVTFNCLLEDL 410
+G +P TF ++ L
Sbjct: 634 KGFIPSMSTFGRVINSL 650
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 9/241 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N KA ++N+ F+ M ++ G P+ YN+LI F + + ++A +
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEM--ILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 525
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++ + PD V+FN LI GFCRN + A LF+++ EKG + +FNTLI F G+
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ EM+ G S T +L+DG C V +A +++ ++G +P +
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 645
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-LMEKMLKE 394
++ L A+ ++ + K G +P V+ L +K + A L+E ++K+
Sbjct: 646 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTI-----LNADKKEIAAPKILVEDLMKK 700
Query: 395 G 395
G
Sbjct: 701 G 701
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ L E M + P YN ++NG K + ++ + M
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEY-GIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 491
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ +T+NILI FCR+ K + A + +M ++G +P+ VSFNTLI GF
Sbjct: 492 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 551
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + ++ E G ++ T L+ + + A ++ + +G + Y L
Sbjct: 552 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 611
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C N A + E+ KKG +PS+ +I L + +A G++ M+K G+
Sbjct: 612 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 671
Query: 397 LPDSV 401
+P+ V
Sbjct: 672 VPEVV 676
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F ++N+M + M + +G P +N LI GF + + + A + +
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQ--EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ TFN LI F +A +F EM KG + ++ LI G
Sbjct: 561 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 620
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D EMI+ G S T +++ L RV +A ++ + GV+P+
Sbjct: 621 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE------ 674
Query: 336 LVEKLCGEGNAGIALE--VVDELWKKGNL 362
+V+ + IA +V++L KKG++
Sbjct: 675 VVDTILNADKKEIAAPKILVEDLMKKGHI 703
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 155/310 (50%), Gaps = 3/310 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++A + R+ D L+ + M L G P V YN+L+ K R + +AL D M +
Sbjct: 170 IHALCERGRVADALVVLDGM--LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAE 227
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+P+ VT+N++I CR D A L + +GC PN V++NT+++GF ++ +
Sbjct: 228 GCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDA 287
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM+ C + T ++++ LC +G + K + S+ G Y ++
Sbjct: 288 DEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISG 347
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+C +GN ALE++ + G P ++ T+++GL + +A LM KM + LPD
Sbjct: 348 MCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPD 407
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ TFN ++ C G + A + KG +P+ TY ++ G T+ + ++ L+N
Sbjct: 408 NSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLN 467
Query: 460 EMLDEGFIPD 469
EM ++GF D
Sbjct: 468 EMANKGFNTD 477
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 1/294 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YN ++ GF + A D MVR+ P+ T N++I+ CR
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTL 324
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+M + GC NVV++N +I G + D + + M GC+ VT ++ GLC
Sbjct: 325 YLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLC 384
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ R A EL+I S+ LP + + ++ C +G A EV ++ +KG P+
Sbjct: 385 SADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNST 444
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+T+I GL + K +A L+ +M +G D + + L E L + + ++
Sbjct: 445 TYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKL 503
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G+ P + Y+ ++ G R + +++ +M+ G +PD +TY ++GL
Sbjct: 504 QDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGL 557
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 2/274 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+CP E + +N + + L E M K +V YN +I+G + D
Sbjct: 298 NCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKH-GCTANVVTYNAVISGMCEQGNVDS 356
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL M KPD+VT+N ++ G C +++ A L +M + P+ +FNT+I
Sbjct: 357 ALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIIS 416
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ + + + +M E GC +S T ++ GL G++ +A EL+ + + +G
Sbjct: 417 FWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG-FN 475
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
D Y L E L E ++VV +L G P + T++ GL R K A ++
Sbjct: 476 TDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVL 535
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
M+ G +PD T+ L+E L G + +A L
Sbjct: 536 ADMVSCGCMPDESTYIILIEGLFYEGYSKEAREL 569
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + YN ++ G ++ A +M ++ PD TFN +IS +C+ A
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F++M EKGCNPN +++T+I G K ++ + + EM G + +L + L
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMY-RVLTESLN 488
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E ++ + ++V G+ P+ Y ++ LC G A++V+ ++ G +P
Sbjct: 489 KEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDES 548
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
LIEGL EA L+ ++ +L +S+ N
Sbjct: 549 TYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKN 586
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P+V N L+R + + A + G E ++ T LVDG C G + A +
Sbjct: 94 PDVPLANRLVRDLC---RRGRPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRV 150
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
V + + L+ LC G AL V+D + +G P V+ L++ +
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
R +A L++ M EG P++VT+N +++ +C G A L ++G P+ +
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
Y+ ++ G+ R + + +++EM+ E P+ AT N ++ L RK + Q
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTL--CRKGLLQ 320
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 18/232 (7%)
Query: 100 STIDSF--RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIF 157
S + SF + D T+ +++ L S+ R+ + ++ +S ND + I
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMS------QNDRLPDNSTFNTII 415
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + L AFE +++ + P+ + Y+ +I G K + ++AL +
Sbjct: 416 SFWCQKGLI-------LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNE 468
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D + + +L + K + + + ++++ G +P V +NT++ G K
Sbjct: 469 MANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
D +++ +M+ GC T IL++GL EG +A EL+ R VL
Sbjct: 528 TDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVL 579
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR---EFDKALGFY 213
F+ +NA K +MN E M K+ P+V YN LI+G+ K + KA
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MV + V P++ TFNILI GF ++ ++ +F+EM ++ PNV+S+N+LI G
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K E ++M +M+ G + + +T L++G C + +A ++ +G +P Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C G + +E+ ++G +P V LI GL R A L +++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G LPD VTF+ L+E C G + A L S GL P +TY+I++ GY +E K
Sbjct: 465 KG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 454 GENLVNEMLDEGFIP-DLATYNSYMDGLSNARK 485
N+ +M E + ++A+YN + G S K
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 181/410 (44%), Gaps = 47/410 (11%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM-------ERIFHFAVNAFVKA 167
++ SLA++ R+S++ S L+ N IF M I V A+
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+R G AF+ ++S ++I + R D Y M+R +++P+V T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY-VYKEMIRRKIQPNVFT 225
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF---GERKFDEGVNMAY 284
FN++I+ C+ K + A + +M+ GC+PNVVS+NTLI G+ G K + +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 285 EMIELGCEFSSVTCEILVD-----------------------------------GLCNEG 309
EM+E + T IL+D GLCN G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++ +A + GV P Y L+ C AL++ + +G +P+
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI+ +L K + L E+M +EGI+PD T+NCL+ LC G A +L ++K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD +T+HIL+ GY R+ ++ L+ EM G P TYN M G
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 36/308 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F K + + + F+ M D +P+V YN LING + +A+ D+M
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+P+++T+N LI+GFC+N AL +F ++ +G P +N LI + K
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 277 DEGVNMAYEMIELG---------CEFSS-------------------------VTCEILV 302
D+G + EM G C + VT IL+
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILM 477
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+G C +G KA L+ + S+ G+ P+ Y +++ C EGN A + ++ K+ L
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 363 P-SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+V + L++G + K +A+ L+ +ML++G++P+ +T+ + E++ D G D +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 422 LRLLASTK 429
STK
Sbjct: 598 HLFNVSTK 605
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 166/331 (50%), Gaps = 4/331 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + + ++ +A ++ + + M+K P +SI N I+ V DKA+ F +RM
Sbjct: 235 FGYVMVSYSRAGKLRNAMRVLTMMQK-AGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++P+V+T+N LI G+C + + A+ L EM KGC+P+ +S+ T++ GF + K
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLCKEKR 352
Query: 277 DEGVNMAYEMIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ V + E + VT V L G +A E + + R Y
Sbjct: 353 IKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYS 412
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V C EG A E+V+E++ KG +P V+ T++I GL + RK +A ++ +M K
Sbjct: 413 AIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKH 472
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++V++ LL LC G +++A + ++ P+ +TY +L+ G+ RE + E
Sbjct: 473 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 532
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+LV EM+ +GF P N + L K
Sbjct: 533 CDLVREMIKKGFFPTPVEINLLIQSLCQEEK 563
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 1/323 (0%)
Query: 154 ERIFHFAVNAFV-KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
++I ++ V F+ K R+ + L E M K + P YN ++ K D+AL F
Sbjct: 336 DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEF 395
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
R + D V ++ ++ FCR + D A + EM KGC P+VV++ ++I G
Sbjct: 396 LREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQ 455
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
ERK D+ M +M + GC+ ++V+ L++GLC G L+A E++ +P
Sbjct: 456 ERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAIT 515
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ EG + A ++V E+ KKG P+ + LI+ L + K EA ME+ L
Sbjct: 516 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 575
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G + V F ++ C A L PD +TY ++ ++ R +
Sbjct: 576 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 635
Query: 453 EGENLVNEMLDEGFIPDLATYNS 475
E L +ML G IP TY +
Sbjct: 636 EATKLAMKMLRVGLIPTPVTYRT 658
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 51/428 (11%)
Query: 93 FHIFAWASTIDSFRHDHT----TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIF 148
F WA +RHD F +++ S + + + VL + GI
Sbjct: 212 LRFFYWADRQWRYRHDPIRRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKA-------GIE 264
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
P++ I + A++ V NR++ + E M ++++ P+V YN LI G+ +
Sbjct: 265 --PDLS-ICNTAIHVLVMGNRLDKAVRFLERM-QIVEIEPNVITYNCLIKGYCDLHRLED 320
Query: 209 AL----------------------GF-------------YDRMVRD-RVKPDVVTFNILI 232
A+ GF ++M++D + PD VT+N +
Sbjct: 321 AMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFV 380
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
++ D AL RE E+ + V ++ ++ F E + D+ + EM GC
Sbjct: 381 HMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCI 440
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
VT +++GLC E +V +A +++ + G P Y L+ LC GN+ A E+
Sbjct: 441 PDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 500
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + +P+ I + L+ G RR K EA L+ +M+K+G P V N L++ LC
Sbjct: 501 MNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 560
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ +A R G + + + ++ G+ +++ + +L+++M PD+ T
Sbjct: 561 EEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVT 620
Query: 473 YNSYMDGL 480
Y + +D L
Sbjct: 621 YTTIIDAL 628
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 171/422 (40%), Gaps = 26/422 (6%)
Query: 54 LRFLKTHLLTPTN---NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHT 110
+R L +L +N +Q+T ++ +H L H F + FR D
Sbjct: 356 VRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALE------FLREAEERRFRVDKV 409
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
+ IV S R + ++N + + C P++ + +N + ++
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGC---------IPDVV-TYTSVINGLCQERKV 459
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ M K +P+ Y L+NG K +A + D P+ +T+++
Sbjct: 460 DQAKKMLRQMYKH-GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 518
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ GF R K A L REM +KG P V N LI+ E K DE + + G
Sbjct: 519 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 578
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C + V ++ G C + + A L+ D P Y +++ L +G A
Sbjct: 579 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 638
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ ++ + G +P+ + T+I R+ + + L+EKML +N ++E L
Sbjct: 639 KLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKL 696
Query: 411 CDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G A +L ++L + +D + T H+L+ Y + N+ M + IP
Sbjct: 697 CSFGNLEQAYKLLGKVLRTASKIDAN--TCHMLIESYLSKGIPLMSYNVACRMFNRNLIP 754
Query: 469 DL 470
DL
Sbjct: 755 DL 756
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 160/308 (51%), Gaps = 3/308 (0%)
Query: 182 KLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
KL++ + + I Y+ ING K + +A+ + M PD T+NILI+G C++ +
Sbjct: 82 KLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQ 141
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
++ + L EM+ +G +P VV++ TLI GF + D +++ EM G ++VT
Sbjct: 142 LEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTA 201
Query: 301 LVDGLCNEGRVLKACELVIDFSRRG--VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ GLC+ G V +A ++ + RG P Y L+ LC +G + +E +DE+
Sbjct: 202 LIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMII 261
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+ T LI GL + +EA+ L+ +M+ G D V +N L++ LC +G
Sbjct: 262 SGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDF 321
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A +++L KG+ PD TY L+ G E L+ EM +G +P+ TY + ++
Sbjct: 322 AREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381
Query: 479 GLSNARKS 486
G + A ++
Sbjct: 382 GFTQADRT 389
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K ++ + + F M + P YN+LING K + + + D M
Sbjct: 98 INGLCKKGQIAEAMEIFREMEEK-GSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARG 156
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P VVT+ LI GFC + D A+ + EM +G PN V++ LI+G + + +
Sbjct: 157 FSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAI 216
Query: 281 NMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM G C + VT L+ GLC +G E + + G P + Y L+
Sbjct: 217 LVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIH 276
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC +G+ A +++E+ G V+ +LI+GL ++ + A + M+++G+ P
Sbjct: 277 GLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAP 336
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+ L++ LCD G +A L KG+ P+ +TY L++G+T+ +R LV
Sbjct: 337 DVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLV 396
Query: 459 NEMLDEGFIP 468
NEM G +P
Sbjct: 397 NEMKSNGLMP 406
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 3/287 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K ++ G+ + M+ P+V Y LI+GF D A+ D M
Sbjct: 129 YNILINGLCKDAQLEMGVSLMDEMQAR-GFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVSFNTLIRGFFGER 274
+ P+ VT+ LI G C + + A+ + +EM+ +G C PNVV++ LI G +
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F+ G+ EMI GC ++ T L+ GLC +G L+A L+ + G Y
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A E+ + +KG P V T+LI+GL EA GLM++M +
Sbjct: 308 SLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
GI+P+SVT+ L+ RT A +L + GL P G Y IL
Sbjct: 368 GIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV--R 218
++ F A R++ + + M P+ Y LI G C E ++A+ M
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHR-GITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRG 226
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+VVT+ LI G C+ F++ + EM GC PN ++ LI G + F E
Sbjct: 227 NECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLE 286
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+ +GCE V L+DGLC G + A E+ I +GV P F Y L++
Sbjct: 287 AAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQ 346
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G AL ++ E+ KG +P+ + TTLI G + + A L+ +M G++P
Sbjct: 347 GLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406
Query: 399 DSVTFNCLLEDL 410
+ L + L
Sbjct: 407 AGDIYKILFKSL 418
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
R + +L ++R + +V+S++ I G + + E + + EM E G S
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T IL++GLC + ++ L+ + RG P Y L+ C G A++++DE+
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG--ILPDSVTFNCLLEDLCDVG 414
+G P+ + T LI+GL + A ++++M G P+ VT+ L+ LC G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
G P+ TY L+ G ++ E L+NEM+ G D+ YN
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307
Query: 475 SYMDGL 480
S +DGL
Sbjct: 308 SLIDGL 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y LI G D+ALG M + P+ VT+ LI+GF + + D AL L
Sbjct: 336 PDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQL 395
Query: 248 FREMREKGCNPNVVSFNTLIRGFF 271
EM+ G P + L + +
Sbjct: 396 VNEMKSNGLMPAGDIYKILFKSLY 419
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 164/322 (50%), Gaps = 4/322 (1%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA + ++ + K RP+++ YNV+++G K F + ++RMV + ++PDV
Sbjct: 240 KAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDV 299
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
+T+ ILI G CR+ D A ++ E+ + G + +N+L++GF + E ++
Sbjct: 300 ITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF-WD 358
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV--LPKDFDYFGLVEKLCGE 343
+ T I++ GL + G V +A EL D + V +P + L+ LC
Sbjct: 359 SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIEL-WDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A A + +E G V + +++I GL + + V+A + EKM K+G P+S +
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ C V RT DA R+ + G P +TY+ L+ G + + +E ++ EM++
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
GF PD+ TY S + GL + +K
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKK 559
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 141/266 (53%), Gaps = 12/266 (4%)
Query: 156 IFHFA--VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+F ++ +N R+ D + +E M K DG +P+ IYN LI+GF + A+
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDK--DGCKPNSHIYNALISGFCQVYRTSDAVRI 496
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y +M + P V+T+N LI G C+ +K+ A + REM E G P++ ++ +LIRG F
Sbjct: 497 YSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFS 556
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF- 331
++K D+ +++ +++ G + + IL+ GLC+ G+V +A + D + P +
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLM 388
Y L++ L G A + + + G P +I+ T I+GL R+ +G++ L+
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQ---LL 673
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVG 414
+++L GI+P +T+N L+ + G
Sbjct: 674 DEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 177/413 (42%), Gaps = 74/413 (17%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKC 203
I C R + ++AFV+A R +D F ++ GR P++ YN+++
Sbjct: 112 ILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCAR 171
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D+A+ +D + R +V PD +T++ L+ G + + D AL L EM P+VV +
Sbjct: 172 GDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCY 231
Query: 264 NTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
N L+ G F +F++ + + +++ + G + T +++DGLC GR + E+
Sbjct: 232 NALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMV 291
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE--------- 373
+ P Y L+ LC G+ A V E+ K G + +L++
Sbjct: 292 ANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQ 351
Query: 374 ------------GLRRLR------KGVEASGLMEKMLK--------EGILPDSVTFNCLL 407
GLR LR KG+ SG++++ ++ +PD+VTF L+
Sbjct: 352 EAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411
Query: 408 E-----------------------------------DLCDVGRTVDADRLRLLASTKGLD 432
LC+VGR VDA ++ G
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ Y+ L+SG+ + R + + ++M D G P + TYN+ +DGL A K
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 156/356 (43%), Gaps = 39/356 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ V F +A R+ + +++ G ++ YN++I G D+A+ +D
Sbjct: 336 MYNSLVKGFCQAGRVQEAWKFWDSAG--FAGLRNLRTYNIMIKGLFDSGMVDEAIELWDL 393
Query: 216 MVRD-RVKPDVVTFNILISGFCRN-----------------KKFDL-------------- 243
+ +D PD VTF LI G C+N K+ D+
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453
Query: 244 ----ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
A+ ++ +M + GC PN +N LI GF + + V + +M + GC + +T
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+DGLC + +A + + G P Y L+ L + AL + ++ K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLLEDLCDVGRTVD 418
G V+ LI GL K EA + M K+ P+ VT+N L++ L + G
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A L + GL+PD ++Y+ + G +R EG L++E+L G IP + T+N
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFD 207
C ++ ++ KA + + A R++++ P ++ Y LI G ++ D
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQE---ASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK------------- 254
AL + +++ +K DV+ NILI G C K D AL +F +M+EK
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621
Query: 255 -----------------------GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
G P+++S+NT I+G + EG+ + E++ G
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681
Query: 292 EFSSVTCEILVDGLCNEGRV 311
+ +T ILV + G +
Sbjct: 682 IPTVITWNILVRAVIKYGPI 701
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 362 LPSVIACT-------TLIEGLRRLRKGVEASGLMEKM----LKEGILPDSVTFNCLLEDL 410
LPS++ C L++ R R+ +A + I P+ T+N +L L
Sbjct: 109 LPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSL 168
Query: 411 CDVGRTVDADRLRLLAST---KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C G D DR L + + + PD +TY L+ G +++R +L++EM
Sbjct: 169 CARG---DLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQ 225
Query: 468 PDLATYNSYMDG 479
PD+ YN+ + G
Sbjct: 226 PDVVCYNALLGG 237
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 1/332 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + +N K R D + M + +P++ IYN++I+ F K KA Y
Sbjct: 189 EVCYGTLINGLCKIGRSIDAFQLLQEMEGQVV-KPNIVIYNMIIDSFCKDELTCKARDLY 247
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++V + PD++T+ LI GFCR ++ L EM K NPNV +FN LI F +
Sbjct: 248 LKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRK 307
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K E M M++ G + VT L+ G C G VL+A +L RG+LP + Y
Sbjct: 308 GKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSY 367
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C A+ + +E+ K + ++ ++LI+GL + + A L +
Sbjct: 368 TILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINN 427
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G P+ +T+N L++ C + L L KGL P +TY+IL++GY + R +E
Sbjct: 428 DGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIRE 487
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
NL++ M + PD TYNS DGL + +
Sbjct: 488 AMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 132/260 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +NVLI+ F + + +A G ++ MV+ +PD+VTFN LISG C + A L
Sbjct: 292 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 351
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F + E+G P+V S+ LI G+ ++ DE V++ EM V L+DGLC
Sbjct: 352 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 411
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A EL + G P Y L++ C + + +E+ + KG P+V+
Sbjct: 412 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 471
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G + ++ EA L+ M + + PDS+T+N L + LC GR DA L +
Sbjct: 472 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMH 531
Query: 428 TKGLDPDGMTYHILVSGYTR 447
G D TY++L+ + +
Sbjct: 532 VGGPPVDVATYNVLLDAFCK 551
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV +N +I VK + A+ +MV V P + T +I I+ +C + A +
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ ++G PN ++ T+++G + + ++ + G V L++GLC
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 308 EGRVL-----------------------------------KACELVIDFSRRGVLPKDFD 332
GR + KA +L + G+ P
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ C G G +++ E+ K P+V LI+ R K +EA G+ M+
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K G PD VTFN L+ C G ++A +L +G+ PD +Y IL+ GY + R
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +L NEM + + D+ Y+S +DGL + +
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGR 414
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%)
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D A+ LF + P+V+ FNT+I + +++ +M+ G S T I
Sbjct: 66 DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++ C+ G + A ++ +RG P + +++ LC G A++ D + +G
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
L + TLI GL ++ + ++A L+++M + + P+ V +N +++ C T A
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L L G+DPD +TY L+ G+ R + E + L+ EM+++ P++ T+N +D
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305
Query: 482 NARKSVR 488
K +
Sbjct: 306 RKGKMIE 312
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 198/442 (44%), Gaps = 40/442 (9%)
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ ITPS ++ ++++ +D A A + + HD ++F ++V L S+ +F
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSIAVFDS---ATAEYANGYLHDQSSFGYMVSRLVSANKF 67
Query: 126 SELHSVLNFISANPCPCSNDGI-------------------------FSCPEMERIFHFA 160
++ + C S D + F C ++ +
Sbjct: 68 KAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFYDRMV 217
+ V+ N++N ++ MR+ I P+V+ NVLI CR D L + M
Sbjct: 128 LAILVEENQLNLAFKFYKNMRE-IGLPPTVASLNVLIKAL--CRNDGTVDAGLKIFHEMP 184
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD T+ LISG CR + D A LF EM EK C P VV++ +LI G G + D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + EM G E + T L+DGLC +GR L+A EL RG P Y L+
Sbjct: 245 EAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC E A+E++D + +G P +I G + K EA+ +++M+ GI
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGIT 364
Query: 398 PDSVTFNCLLEDLCDVGRTV------DADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
P+ +T+N ++ +V R + A L L ++G+ + T LV ++
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEF 424
Query: 452 KEGENLVNEMLDEGFIPDLATY 473
++ LV+E++ +G IP+ T+
Sbjct: 425 QKAVQLVDEIVTDGCIPNKGTW 446
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 149/301 (49%), Gaps = 11/301 (3%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR-----NKKFDLAL 245
S + +++ V +F A RM +++ VV+ +IL+S CR ++ FD +L
Sbjct: 52 SSFGYMVSRLVSANKFKAAEDIVARM---KIENCVVSEDILLS-ICRGYGRVHRPFD-SL 106
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+F +M++ C+P+ ++ T++ E + + M E+G + + +L+ L
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 306 C-NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C N+G V ++ + +RG P + Y L+ LC G A ++ E+ +K P+
Sbjct: 167 CRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ T+LI GL + EA +E+M +GI P+ T++ L++ LC GR++ A L
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ +G P+ +TY L++G +E + +E L++ M +G PD Y + G
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVS 346
Query: 485 K 485
K
Sbjct: 347 K 347
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 329 KDFD-------YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
KDFD Y ++ L E +A + + + G P+V + LI+ L R
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT 172
Query: 382 VEAS-GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
V+A + +M K G PDS T+ L+ LC GR +A +L K P +TY
Sbjct: 173 VDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L++G E V EM +G P++ TY+S MDGL +S++
Sbjct: 233 LINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQ 280
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 198/397 (49%), Gaps = 13/397 (3%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
IF + S+R +TF ++ + A+ F L VL+ + C IF E
Sbjct: 76 IFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMK-----CEKRVIF-----E 125
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ F A+ KA+ + F+ M + + + +N ++N ++ F +AL FY+
Sbjct: 126 KCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYN 185
Query: 215 RMVRDR---VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ + + P+V+TFN++I C+ D A+ +FR+M + C P+V ++ TL+ G
Sbjct: 186 HVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLC 245
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ DE V++ EM GC S VT +L++GLC +G + +A +LV + +G +P +
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEV 305
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ LC +G A+ ++D + +P+V+ T+I GL + + ++ + ++ M
Sbjct: 306 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALM 365
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G + ++ L+ L G++ +A L + KG + + + Y ++ G R+ +
Sbjct: 366 EERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKP 425
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +++EM ++G P+ T +S M G A S R
Sbjct: 426 DDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 159/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A K ++D + F M + P V Y L++G K D+A+ D M
Sbjct: 202 FNLVIKAMCKVGLVDDAIQVFRDM-TIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D P VTFN+LI+G C+ A L M KGC PN V++NTLI G + K
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ +++ M+ C + VT +++GL +GR L ++ RG ++ Y L
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTL 380
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L EG + A+ + E+ KG + I + +I+GL R K +A ++ +M +G
Sbjct: 381 ISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGC 440
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P++ T + L++ + G + A + + + + Y +L+ G ++ + KE
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 500
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +ML +G PD+ Y+S ++GLS A
Sbjct: 501 VWTQMLGKGCKPDVVAYSSMINGLSIA 527
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 5/323 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ KA+R+++ + + M+ IDG PS +NVLING K + +A D M
Sbjct: 241 MDGLCKADRIDEAVSLLDEMQ--IDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLK 298
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P+ VT+N LI G C K + A+ L M C PNVV++ T+I G + + +G
Sbjct: 299 GCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDG 358
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M E G + L+ GL EG+ +A L + + +G Y +++
Sbjct: 359 ACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDG 418
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC +G A+EV+ E+ KG P+ C++L++G A + + M K +
Sbjct: 419 LCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQN 478
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V ++ L+ LC G+ +A + KG PD + Y +++G + ++ L N
Sbjct: 479 EVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYN 538
Query: 460 EMLDEG--FIPDLATYNSYMDGL 480
EML +G PD+ TYN ++ L
Sbjct: 539 EMLCQGPDSQPDVVTYNILLNTL 561
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 178/385 (46%), Gaps = 25/385 (6%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA 160
TI D T+ ++ L + R E S+L+ + DG F P F+
Sbjct: 226 TIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI-------DGCFPSP---VTFNVL 275
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR------PSVSIYNVLINGFVKCREFDKALGFYD 214
+N K ++ KL+D P+ YN LI+G + +KA+ D
Sbjct: 276 INGLCKKGDLSRA-------AKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLD 328
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RMV + P+VVT+ +I+G + + + M E+G N ++TLI G F E
Sbjct: 329 RMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEG 388
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E +++ EM G E +++ ++DGLC +G+ A E++ + + +G P +
Sbjct: 389 KSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCS 448
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ GN+ A+EV ++ K + + + LI GL + K EA + +ML +
Sbjct: 449 SLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGK 508
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G PD V ++ ++ L G DA +L +L PD +TY+IL++ +++
Sbjct: 509 GCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSIS 568
Query: 453 EGENLVNEMLDEGFIPDLATYNSYM 477
+L+N MLD G PDL T ++
Sbjct: 569 RAIDLLNSMLDRGCDPDLVTCTIFL 593
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 128/309 (41%), Gaps = 59/309 (19%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N VK R DG M + + +Y+ LI+G K + +A+ + M
Sbjct: 346 INGLVKQGRALDGACVLALMEER-GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + + ++ +I G CR+ K D A+ + EM KGC PN + ++L++GFF V
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAV 464
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY------- 333
+ +M + + V +L+ GLC +G+V +A + +G P Y
Sbjct: 465 EVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGL 524
Query: 334 --FGLVE----------------------------KLCGEGNAGIALEVVDELWKKGNLP 363
GLVE LC + + A+++++ + +G P
Sbjct: 525 SIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDP 584
Query: 364 SVIACTTLIEGLR---------------------RLRKGVEASGLMEKMLKEGILPDSVT 402
++ CT + LR + ++ + AS ++E ML++ + P T
Sbjct: 585 DLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHST 644
Query: 403 FNCLLEDLC 411
+ ++E+LC
Sbjct: 645 WARVVENLC 653
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 2/297 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+ RP+ Y L+ R +A+G M V+PDVVT+ LI G C D A
Sbjct: 108 ETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKA 167
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ L REM E G PNVV ++ L++G+ +++ + EM G E V L+D
Sbjct: 168 VELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDS 227
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC EG+V KA +++ RG+ P Y L+ +C EG+ A+ + + + +KG
Sbjct: 228 LCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALD 287
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKML--KEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+ TLI GL + + EA GL+E+M+ + + P+ VTFN ++ LC GR A ++
Sbjct: 288 AVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQV 347
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R + + G + +T+++L+ G R ++ K+ L++EM G PD TY+ ++G
Sbjct: 348 RDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILING 404
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 3/271 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFRE 250
YN LI G E D+A+G + M+ V+P+VVTFN +I G C+ + A +
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E GC N+V+FN LI G K + + + EM G E S T IL++G C +
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L+ R G+ P+ Y L+ LC +G A DE+ K L V+A +T
Sbjct: 411 VDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYST 469
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+I G RLR A ++ ML EG++PDSVT++ L+ + G A+R+ + G
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
PD + L+ GY + ++ L+ EM
Sbjct: 530 FVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 10/333 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGF 212
++ + + KA R FE M GR P V +Y LI+ + + KA
Sbjct: 185 VYSCLLQGYCKAGRWECVSKVFEEM----SGRGIEPDVVMYTGLIDSLCREGKVKKATQV 240
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D+M+ ++P+VVT+N+LI+ C+ A+ L M EKG + V++NTLI G G
Sbjct: 241 MDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSG 300
Query: 273 ERKFDEGVNMAYEMI--ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ DE + + EMI E E + VT ++ GLC GR+ +A ++ + G
Sbjct: 301 VLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNL 360
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L+ L A+E++DE+ G P + LI G ++ + A L+ K
Sbjct: 361 VTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSK 420
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M ++GI P+ V + LL LC+ G ++ R K D + Y ++ G R
Sbjct: 421 MRRDGIEPELVHYIPLLAALCEQG-MMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRD 479
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
RK E + MLDEG IPD TY+ ++ +N+
Sbjct: 480 RKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + R + V + ++ N C C+ F+ + ++ ++
Sbjct: 326 VTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACN----------LVTFNLLIGGLLRVHK 375
Query: 170 MNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ A E M ++ P Y++LINGF K + D+A +M RD ++P++V
Sbjct: 376 VKK---AMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ L++ C + A F EM K C +VV+++T+I G R M+
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G SVT +L++ N G + A ++ + G +P + L++ +G+
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTE 551
Query: 348 IALEVVDELWKK 359
LE++ E+ K
Sbjct: 552 KVLELIREMTAK 563
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ LC +G A + + P+ ++ TTL+ L R+ +A GL+ M
Sbjct: 81 YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQ 140
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G+ PD VT+ L+ LCD A L G++P+ + Y L+ GY + R +
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWE 200
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ EM G PD+ Y +D L K + T+
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQ 239
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F+ M K + + V Y+ +I+G + R+ A F M+ + + PD VT+++LI+ F
Sbjct: 453 FDEMHK--NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFA 510
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM----IELGCE 292
+ A + ++M G P+V F++LI+G+ + ++ + + EM I L +
Sbjct: 511 NSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSK 570
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFS-RRGVLPKDFDYFGLVEKLCGEGNAGIA 349
S LV NEG+ L D +G + + ++ KLC + +A
Sbjct: 571 IISTIYTCLVAN--NEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLCNKVEPAVA 626
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 40/358 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N R L FE M D P+ YNV+I GF KA +D+M++
Sbjct: 384 INQLYVEGRFETALTIFEWMLSH-DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442
Query: 221 VKPDVVTFNI-----------------------------------LISGFCRNKKFDLAL 245
P+V+T+NI LISGF R K + A
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF EM E G +PNVV++N +I G+ K D+ + + ++M+E G SS T +++ G
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
R+ +A ++G+LP Y ++ LC G +A ++ E+ K+ P++
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++LI+GL + + +A E++L +G P+ T+ L+ LC GR +AD+L
Sbjct: 623 CTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KGL P Y L+ G + + + + M+ GF P L+ Y + + L A
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 217/524 (41%), Gaps = 76/524 (14%)
Query: 14 HNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTH----LLTPTNNQI 69
H SP + + P P + L S T ++ +HL+ LK H LL NN
Sbjct: 33 HPSSPLSISSNTDPFPELVSKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNN-- 90
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
S+L F F W S F+HD + F+ ++ L F
Sbjct: 91 -TESVLRF------------------FHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPAD 131
Query: 130 SVLNFISANPCPCSNDG-----IFSCPEMERIFHFAVNAF------VKANRMN-DGLLAF 177
+V + + C N+G I E+ + F + ++ + + DGL
Sbjct: 132 NVRILMIKS---CRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRD 188
Query: 178 EAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
+ L G RP++ +N +I + +A + PD T+ LI G C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N DLA +F M + GC+PN V+++ LI G E + +E ++M EMI+ G E +
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
I + LC+ GR +A +L+ +RG P Y L+ L +G +A+ V ++
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
G +P+ + + LI L + A + E ML LP++ T+N +++ C +G
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYI 428
Query: 417 VDA---------------------------------DRLRLLASTK--GLDPDGMTYHIL 441
A + +RLL K GL D TY L
Sbjct: 429 QKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANL 488
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+SG++R + + +L NEM++ G P++ TYN+ ++G K
Sbjct: 489 ISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 5/260 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N ++ +++D L F M + PS YN++I+GF K +A F +M
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVE-SGNVPSSGTYNMMISGFSKTNRISEAENFCGKM 578
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ + P+V+T+ I G C+N + LA +F EM+++ PN+ ++++LI G E +
Sbjct: 579 VKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQA 638
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ A +++ GCE + T LV GLC +GR +A +LV ++G+ P + Y L
Sbjct: 639 ED----AERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C AL++ D + G P + LI L + +A + + MLK+
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHW 754
Query: 397 LPDSVTFNCLLEDLCDVGRT 416
D V + LL+ L G T
Sbjct: 755 NSDEVVWTVLLDGLLKEGET 774
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%)
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
G+ +V E+ G P++ +I+ L K EA +M + G PD+ T+ L
Sbjct: 184 GLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSL 243
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C G A + G DP+ +TY L++G E R +E +++ EM+D+G
Sbjct: 244 IIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGI 303
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
P + Y + L +A +S +
Sbjct: 304 EPTVHAYTIPIVSLCDAGRSCEAVK 328
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+PS IY L+ G K E + AL +D MV +P + + LI C+ A
Sbjct: 685 QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQC 744
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC------------EFS 294
+F+ M +K N + V + L+ G E + D + + + M C E S
Sbjct: 745 MFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELS 804
Query: 295 SVTCEILVDGLCNEGRVLK 313
++ C I + + + ++K
Sbjct: 805 ALGCSIEIPQISKQLGIVK 823
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ Y +LI + D + D M+ ++PD+ FN ++ G CR D A
Sbjct: 24 SLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFI 83
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
R + KG P+V+S++ L+RG +RK+++G + +M+ GCE + VT IL+ LC +
Sbjct: 84 RYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRD 143
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G+V +A L+ +G+ P + Y L+ C E +A+E ++ + G LP ++
Sbjct: 144 GKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNY 203
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T++ L + K EA + EK+ + G P+ ++N L L G + A + L +
Sbjct: 204 NTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLS 263
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K +DPD +TY+ L+S R+ + L+ +M + P + +YN + GLS +
Sbjct: 264 KDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHR 320
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 4/266 (1%)
Query: 187 RPSVSIYNVLINGFVKCRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
RP + I+N ++ G CRE D+A F + PDV++++IL+ G +K++
Sbjct: 57 RPDMFIFNAVVGGM--CREGLVDRAFEFIRYISAKGYAPDVISYSILLRGLLNQRKWEDG 114
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +M KGC PNVV+++ LI + K +E V++ M E G + + + L+
Sbjct: 115 EKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAA 174
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C E RV A E + G LP +Y ++ LC G A AL++ ++L + G P+
Sbjct: 175 FCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPN 234
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V + TL L + A G++ +ML + I PD +T+N L+ LC A L +
Sbjct: 235 VSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLV 294
Query: 425 LASTKGLDPDGMTYHILVSGYTRENR 450
+ P ++Y+I++ G ++ +R
Sbjct: 295 DMESSVYQPSVISYNIVLLGLSKVHR 320
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%)
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S VT IL++ +G V +L+ + G+ P F + +V +C EG A E
Sbjct: 23 ISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEF 82
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ + KG P VI+ + L+ GL RK + LM ML +G P+ VT++ L+ LC
Sbjct: 83 IRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCR 142
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+ +A L + +GL PD +Y L++ + +E+R + M+ +G +PD+
Sbjct: 143 DGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVN 202
Query: 473 YNSYMDGLSNARKS 486
YN+ + L K+
Sbjct: 203 YNTILSTLCKNGKA 216
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +++ + ++ + + + M++ G P Y+ LI F K D A+ F +
Sbjct: 133 YSILISSLCRDGKVEEAVSLLKVMKE--QGLTPDAYSYDPLIAAFCKESRVDLAIEFLES 190
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV--------------- 260
M+ D PD+V +N ++S C+N K D AL +F ++ E GC PNV
Sbjct: 191 MISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGH 250
Query: 261 --------------------VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+++N+LI + D+ + + +M + S ++ I
Sbjct: 251 KIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYNI 310
Query: 301 LVDGLCNEGRVLKACE 316
++ GL R+ A E
Sbjct: 311 VLLGLSKVHRISDAIE 326
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 165/326 (50%), Gaps = 7/326 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ A+N V+A + + F R + P+ Y LI+G K + D+A D M
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERCV----PNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 217 VRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
RDR + P V N +I G C+ +F ALG F+ + C P++++FN L+ +
Sbjct: 57 -RDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 276 FDEGVNMAYEM-IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + M C + VT +++GLC +G++ +A EL+ + G P Y
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LVE LC G ++ E+ ++G P VI TL+ GL + R+ EA L++ M++
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P VT+N L+E C + A RL + S +G PD + Y+ +++G R+ R +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L+ +M+ +PD+ TY++ +DGL
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGL 321
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 12/346 (3%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFD 207
C E + ++ KA +++ A+E + ++ D P V+++N +I G K F
Sbjct: 26 CVPNEFTYGSLIHGLCKAGKLDQ---AYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFG 82
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTL 266
ALG++ + + PD++TFNIL+ ++ + + A +F M C PNVV++ T+
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G + K D + + M E GC + +T +LV+GLC GR K L+ + +RRG
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L+ LC ALE+V + + G P+V+ +L+E R ++ A
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L++ M + G PD + +N ++ LC R DA L PD +TY ++ G
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322
Query: 447 RENR-----RKEGENLVNEMLDE-GFIPDLATYNSYMDGLSNARKS 486
++ R + E + EM+ + G P+ TY ++GL ARKS
Sbjct: 323 KDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS 368
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 177/388 (45%), Gaps = 41/388 (10%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F IF T + T+ ++ L + +L+ ++ C CP
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGC---------CPN 170
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ + V KA R + G + M + +P V +YN L+NG K R D+AL
Sbjct: 171 V-ITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNTLLNGLCKSRRLDEALEL 228
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
M+R P VVT+N L+ FCR+K+ D A L + M E+GC P+V+++NT+I G
Sbjct: 229 VQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCR 288
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + D+ + +M+ C +T ++DGLC + RV D D
Sbjct: 289 DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV------------------DAD 330
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ +E C E+++ + + G P+ +IEGL R RK +A L+ +M+
Sbjct: 331 W--KLEAAC---------EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++PD +F+ ++ LC A ++ + S + P+ + Y L+ G ++
Sbjct: 380 DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVD 439
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ V E++ E F P +ATYNS +DGL
Sbjct: 440 KAVR-VFELMVESFRPGVATYNSVLDGL 466
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N +N V+ + +A+ + +R P+ T+ LI G C+ K D A L EMR+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P V N +I+G +F + + + C +T ILVD L GRV +
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A F + E + LP+V+ TT+I
Sbjct: 119 A-------------------FQIFESMHTSSQC---------------LPNVVTYTTVIN 144
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + K A L++ M + G P+ +T++ L+E LC GRT L + +G P
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
D + Y+ L++G + R E LV M+ G P + TYNS M+ +++ R R
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y V+I G + R+ +AL RM+ V PD+ +F+++I C++ D A +
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGL 305
F M E+ C PN V++ LI G + D+ V + M+E F T ++DGL
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE---SFRPGVATYNSVLDGL 466
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR+ +A +V + P Y L+ LC A E+ + KG V
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L + ++ +A G+ K+++ G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREF 206
CP ++ + + R++D A +++++ R P V Y+ +I+G K
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDD---AQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 207 DK------ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
D A + M + P+ T+ ++I G CR +K AL L R M + P++
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC---EL 317
SF+ +I D + M E C+ + V L+DGL G V KA EL
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+++ R GV Y +++ LCG G A+ +V+ + K P + LI GL R
Sbjct: 448 MVESFRPGVAT----YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ EA L + + +G + +N L+ +LC R DA
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPC---PCSNDGIFSCPEMERIFHFAVNAF 164
D ++F ++ SL S+ + + +S C P + + ++
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVA-------------YAALIDGL 432
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K ++ + FE M + RP V+ YN +++G ++A+ + M+ PD
Sbjct: 433 SKGGEVDKAVRVFELMVESF--RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
++ LI G CR + A LF+ + KG V +N L+ +++ + +A
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550
Query: 285 EMIELG 290
++IE G
Sbjct: 551 KLIEAG 556
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 151/300 (50%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+S ++ + K +A+ D M KPDVVT+N+LI+G C+ + D A+
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M GC PNV++ N ++R ++ + + +M+ GC S VT IL++ LC +
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + +A +++ G P Y L+ C E A+E +D + +G P ++
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TL+ L + K A ++ ++ +G P +T+N +++ L VG+T A +L
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
KGL PD +TY LVSG +RE + E +++ G P+ TYNS M GL +R++ R
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 380
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 171/342 (50%), Gaps = 2/342 (0%)
Query: 140 CPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLING 199
C + +F C + F F V K + + + + MR +P V YNVLING
Sbjct: 69 CCINQQTLFPCFSLSG-FSFYVQTTCKESGVGQAMKLLDEMRNK-GSKPDVVTYNVLING 126
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
K D+A+ F + M +P+V+T NI++ C ++ A L +M KGC+P+
Sbjct: 127 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 186
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VV+FN LI + +++ +M GC +S++ L+ G C E ++ +A E +
Sbjct: 187 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 246
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
RG P Y L+ LC +G +A+E++++L KG P +I T+I+GL ++
Sbjct: 247 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 306
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
K A L+++M ++G+ PD +T++ L+ L G+ +A + G+ P+ +TY+
Sbjct: 307 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 366
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
++ G + + + + M+ + P ATY ++G++
Sbjct: 367 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 408
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 11/287 (3%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
I+RS+ S+ R+ + +L+ + C S F+ +N + +
Sbjct: 157 IILRSMCSTGRWMDAEKLLSDMLRKGCSPS----------VVTFNILINFLCRQGLLGRA 206
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ E M + P+ YN L++GF K ++ D+A+ + D MV PD+VT+N L++
Sbjct: 207 IDILEKM-PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 265
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C++ K D+A+ + ++ KGC+P ++++NT+I G K + + + EM G +
Sbjct: 266 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 325
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+T LV GL EG+V +A + D G+ P Y ++ LC A++ +
Sbjct: 326 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 385
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ K P+ T LIEG+ EA L+ ++ G++ S
Sbjct: 386 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKS 432
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 171/373 (45%), Gaps = 40/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F R+ AF + KL+ +P + +N LI G +
Sbjct: 179 FGIPPDVYTLNILINSFCHLRRLG---YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+ + + +PDVVT+ L++G C+ A+ L R M +K C PNV+++NT
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ EMI G CE+ VT
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG + A ++V +RGV P Y L++ C A+
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 415
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + KG +P+V + LI G ++++ +A GL+E+M +G++ D+VT+N L+ L
Sbjct: 416 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR A L G PD +TY IL+ + + E L+ + D+
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 535
Query: 471 ATYNSYMDGLSNA 483
YN +DG+ A
Sbjct: 536 LVYNIAIDGMCRA 548
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + PS + L+ K + + L +M + PDV T
Sbjct: 129 NTLDDALSSFNRMLHM-HPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 187
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC ++ A + ++ + GC P+ +FNTLIRG E K E +++ + I
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + VT L++GLC G A L+ ++ P Y +++ LC +
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ KG P + +LI L L + + L+ +M+ I+P+ V F+ ++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G A + + +G++PD +TY L+ G+ + E + + M+ +G +
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427
Query: 468 PDLATYNSYMDGLSNARK 485
P++ +YN ++G ++
Sbjct: 428 PNVRSYNILINGYCQIQR 445
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +++ +++ K A D M++ V+PDVVT+ L+ G C + D A+ +
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 417
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KGC PNV S+N LI G+ ++ D+ + + +M G +VT L+ GLC+
Sbjct: 418 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L + G +P Y L++ LC + A+ ++ + ++
Sbjct: 478 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 537
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
I+G+ R + A L + +G+ PD T+N ++ LC G +A++L
Sbjct: 538 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 597
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G DG Y+ ++ G+ R N L+ EML EGF D++T ++ LS+
Sbjct: 598 ENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSD 652
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 112/237 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+LING+ + + DKA+G ++M + D VT+N LI G C + A+ L
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM G P++V++ L+ E + + + + + I +DG+C
Sbjct: 488 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 547
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A +L + S +G+ P Y ++ LC G A ++ ++ + G
Sbjct: 548 AGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCI 607
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T+I G R + A+ L+++ML EG D T ++E L D G +RLRL
Sbjct: 608 YNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLRL 664
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 178 EAM--RKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
EAM K I+G + +YN+ I+G + E + A + + ++PDV T+NI+I
Sbjct: 518 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 577
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ D A LFR+M E GC+ + +NT+IRGF + + EM+ G
Sbjct: 578 HGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFS 637
Query: 293 FSSVTCEILVDGLCNEG 309
T ++V+ L ++G
Sbjct: 638 ADVSTTTLIVEMLSDDG 654
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 165/329 (50%), Gaps = 7/329 (2%)
Query: 156 IFHF--AVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALG 211
+FHF +N F + R++ AF + K+I P ++ LING +F +A+
Sbjct: 119 VFHFNILINCFSRLQRVD---FAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME 175
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F+D MV +P++ T+N +I GFC+ K +A+GL ++M + G P++V +NT+I G
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+R E +++ E+ G T IL+ GLCN + +A L + ++P
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ LV+KLC EG A ++ + +KG P+ +L+ G K EA + + M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +G +P+ V++N L+ C R +A L S +GL P+ Y+ L+SG + R
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
E L +M +G PDL T +D L
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSL 444
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 149/291 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+LIN F + + D A ++++ +PD VTF+ LI+G C KF A+ F EM
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PN+ ++NT+I+GF K V + +M + G V ++DGLC + V
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ + +GV P F Y L+ LC A + +E+ +P V+ L+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + EA G+++ M+++G+ P+ T+N L+ C + +A + TKG
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ ++Y+IL++GY + R E L +EM G IP+ YN+ + GL A
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQA 412
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 154/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + ++ L++ V+ + + L R+ R++ DV FNILI+ F R ++ D A +
Sbjct: 82 PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ + G P+ V+F++LI G E KF + EM+ G + + T ++ G C
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ A L+ + G P Y +++ LC + AL++ E+ KG P V
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ L+ GL + EAS L +M+ I+PD VTFN L++ LC G +A + +
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG++P+ TY+ L++GY +N+ E + + M+ +G +P++ +YN ++G A++
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQR 379
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 147/302 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN +I GF K + A+G +M + +PD+V +N +I G C+++ AL
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALD 245
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F E++ KG P+V +++ L+ G + +E + EM+ L VT ILVD LC
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG + +A ++ +GV P Y L+ C + A V D + KG +P+V+
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ LI G + ++ EA L ++M G++P++ +N L+ LC GR +A L
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+G PD +T IL+ + L M D P+L TY+ + + + K
Sbjct: 426 QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Query: 487 VR 488
R
Sbjct: 486 YR 487
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 1/294 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F K + + + M K GRP + IYN +I+G K R +AL + +
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDK-AGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI 250
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDV T++IL+ G C + + + A LF EM P+VV+FN L+ E
Sbjct: 251 KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + MIE G E + T L++G C + +V +A + +G +P Y L
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C A E+ DE+ +G +P+ TLI GL + + EA L + M +G
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGC 430
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
PD VT LL+ LC +G +A RL L P+ +TY IL+ + +
Sbjct: 431 SPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 138/273 (50%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+ AL ++ M+ P +V F+ L+S R K + L L + + +V FN L
Sbjct: 66 EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNIL 125
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I F ++ D ++ ++I+LG E +VT L++GLC E + +A E + G
Sbjct: 126 INCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGY 185
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y +++ C G +A+ ++ ++ K G P ++ T+I+GL + R EA
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALD 245
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ ++ +G+ PD T++ L+ LC+ + +A L + + PD +T++ILV
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E E + ++ M+++G P+ ATYNS M+G
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%)
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+K C N AL + + K LP ++ L+ L R++ L +++ I
Sbjct: 57 QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
D FN L+ + R A + G +PD +T+ L++G E++
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+EM+ G+ P+L TYN+ + G K+
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKT 205
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDK 208
C R F F ++ K+ R+ D L F+AM + +G PSV YN +I G+ K +
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ--NGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL + M ++ PD T+N LI G C ++K + A L ++G P VV+F LI
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLIN 400
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ KFD+ + M +M+ C+ L++ L + R+ +A EL+ + S G++P
Sbjct: 401 GYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP 460
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y +++ C G IALEV+ + + G P+ +L+ GL + +K +A L+
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 520
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
KM K+GI+P+ +T+ LL+ CD +A RL + GL PD Y +L +
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R +E + + + +G Y + +DG S A
Sbjct: 581 GRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKA 612
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 173/414 (41%), Gaps = 37/414 (8%)
Query: 96 FAWASTIDSFRH---DHTTFLFIVRSLASSYRFSELH-SVLNFI-SANPCPCSNDGIFSC 150
F W + D FRH H L ++ + ++ L S+LN +A S D I +
Sbjct: 77 FEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAI 136
Query: 151 PEME--------RIFHFAVNAF-----------VKANRMNDGLLAFEAMRKLIDGRPSVS 191
+ ++FA+ + V + + DGLL P
Sbjct: 137 RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLL------------PDTV 184
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
YN +I + K + A ++ ++ ++P+ T N L+ G+CR + A LF M
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
GC N S+ LI+G + + + + M GC + L+ GLC GRV
Sbjct: 245 PLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A L + GV+P Y ++ G AL++ + + K G P TL
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL +K EA L+ +KEG P VTF L+ C + DA R++ +
Sbjct: 365 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D + L++ +++R KE + L+NE+ G +P++ TY S +DG + K
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 175/425 (41%), Gaps = 61/425 (14%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D F ++ SL R E +LN ISAN G+ P + + ++ + K+
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISAN-------GLV--PNV-ITYTSIIDGYCKS 475
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++ L + M + DG +P+ YN L+ G VK ++ KA+ +M +D + P+V+
Sbjct: 476 GKVDIALEVLKMMER--DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPN--------------------------- 259
T+ L+ G C FD A LF M + G P+
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 260 -----VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
V + TLI GF D + MI+ GC S T +L+ LC + R+ +A
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ S RG+ F Y L++++ EG A + +E+ G+ PS T I
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + +A L+ KM +EG+ PD VT+N L++ +G A +P+
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Query: 435 GMTYHILVS-------GYTRENRRKEGENLV---------NEMLDEGFIPDLATYNSYMD 478
TY +L+ Y R NL+ M+ G P + TY+S +
Sbjct: 774 YWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 833
Query: 479 GLSNA 483
G A
Sbjct: 834 GFCKA 838
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 32/351 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI----YNVLINGFVKCREFDKA 209
E + +A KA R A EA ++ R V++ Y LI+GF K D A
Sbjct: 567 EHAYAVLTDALCKAGR------AEEAYSFIV--RKGVALTKVYYTTLIDGFSKAGNTDFA 618
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+RM+ + PD T+++L+ C+ K+ + AL + +M +G + ++ LI
Sbjct: 619 ATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDE 678
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E K D M EM G + S+ T + ++ C EGR+ A +L++ R GV P
Sbjct: 679 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPD 738
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDEL---------WK---------KGNLPSVIACTTL 371
Y L++ G A + + W KGNL V + T
Sbjct: 739 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT- 797
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G+ L + L+E+M+K G+ P T++ L+ C GR +A L KGL
Sbjct: 798 -SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL 856
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
P+ Y +L+ ++ + V+ M + GF P L +Y + GL N
Sbjct: 857 SPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 27/323 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ +L R +E +L+ +S C+ IF+ + ++ ++
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT---IFA-------YTILIDEMLRE 682
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + M +PS + Y V IN + K + A +M R+ V PDVVT
Sbjct: 683 GKHDHAKRMYNEMTS-SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR----------------GFF 271
+NILI G D A + M C PN ++ L++ G +
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ D + M++ G + T L+ G C GR+ +AC L+ +G+ P +
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C AL V + + G P + + L+ GL + L +
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921
Query: 392 LKEGILPDSVTFNCLLEDLCDVG 414
L+ G D V + L + L G
Sbjct: 922 LELGYNHDEVAWKILNDGLLKAG 944
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V+ Y+ LI GF K ++A D M + P+ + +LI C K F+ AL
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSF 882
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M E G P + S+ L+ G E F++ ++ +++ELG V +IL DGL
Sbjct: 883 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942
Query: 308 EGRV 311
G V
Sbjct: 943 AGYV 946
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+ +V +G E D +RMV+ + P V T++ LI+GFC+ + + A L M
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
KG +PN + LI+ + F++ ++ M E G + + +LV GLCNEG
Sbjct: 852 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
K L D G + + L + L G I +++ + K+
Sbjct: 912 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 153/304 (50%), Gaps = 2/304 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ Y L+ R +A+G M V+PDVVT+ LI G C D A+
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM E G PNVV ++ L+ G+ +++ + EM G E V L+D LC
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+V KA ++ + RG+ P Y L+ +C EG+ AL++ + +KG P V+
Sbjct: 211 RHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVV 270
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLK--EGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TLI GL + + EA L+E+M++ + PD +TFN ++ LC +G A ++R
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRA 330
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ + G + + +++L+ G R ++ K+ L++EM G PD TY+ ++G R
Sbjct: 331 MMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMR 390
Query: 485 KSVR 488
+ R
Sbjct: 391 QVER 394
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVR--DRVKPDVVTFNILISGFCRNKKFDLA 244
+P V YN LI G E D+A+ + M++ RV+PD++TFN +I G C+ A
Sbjct: 266 QPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQA 325
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L + M E GC N+V+FN LI G K + + + EM G + S T IL++G
Sbjct: 326 LQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILING 385
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +V +A + + +G+ P+ Y L++ +C +G G A ++ +E+ + L +
Sbjct: 386 FCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDA 445
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
A +T+I G + + A ++ M+ EG++PD+VT++ + G A+R+
Sbjct: 446 A-AYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ G PD + L+ GY + ++ L EM
Sbjct: 505 QMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM 541
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 333 YFGLVEKLCGEGNAGIAL---EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ LC +G AL V+ + + P+ I+ TTL+ L R+ +A GL+
Sbjct: 59 YNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLR 118
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M G+ PD VT+ L+ LCD A L G++P+ + Y L+ GY +
Sbjct: 119 SMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG 178
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + + EM G PD+ Y + +D L K + R
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAAR 220
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 171/335 (51%), Gaps = 7/335 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N F + +R+ D L F+ M + +P+V IYN +I+G K ++ D AL +RM
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+D + PDVVT+N LISG C + ++ A + M ++ P+V +FN LI E +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E EMI + VT +L+ GLC R+ +A E+ +G P Y L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +++ E+ ++G + + + T LI+G R K A + +M+ G+
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEG 454
P+ +T+N LL LCD G+ A L +LA + G+D D +TY+I++ G + +
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKA--LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
++ + +G +PD+ TY + M GL +K +R+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGL--YKKGLRR 483
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 164/330 (49%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K + + + +E M+ L G P ++ N+L+N F +C + AL F +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQML--GIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P +VTF L++GFCR + AL +F +M G PNVV +NT+I G ++
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +++ M + G VT L+ GLC+ GR A +V ++R + P F +
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ EG A E +E+ ++ P ++ + LI GL + EA + M+ +G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT++ L+ C + +L S +G+ + +TY IL+ GY R + E
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ G P++ TYN + GL + K
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 2/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ ++ L++ K +++D + +++M + ++ T NIL++ FCR + LAL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 248 FREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+M + G P++V+F +L+ GF G+R +D + M +M+ +G + + V ++DGLC
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+V A +L+ + G+ P Y L+ LC G A +V + K+ P V
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+ + + EA E+M++ + PD VT++ L+ LC R +A+ +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG PD +TY IL++GY + + + G L EM G + + TY + G A K
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 155/323 (47%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + ++++ L M KL PS+ + L+NGF + AL +D+MV
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KP+VV +N +I G C++K+ D AL L M + G P+VV++N+LI G ++ +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M M + T L+D EGRV +A E + RR + P Y L+ L
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A E+ + KG P V+ + LI G + +K L +M + G++ ++
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L++ C G+ A+ + G+ P+ +TY++L+ G + ++ ++ +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M G D+ TYN + G+ A
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKA 444
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S Y ++ ++ + D +L + MV+ R P + F+ L+S + KK+D+ + L+ +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+ G N+ + N L+ F + ++ +MI+LG E S VT L++G C R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V A + G P Y +++ LC AL++++ + K G P V+ +
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + +A+ ++ M K I PD TFN L++ GR +A+ +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
LDPD +TY +L+ G +R E E + M+ +G PD+ TY+ ++G ++K
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 351 EVVDELWKKGNLPSV----IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+VV LW++ + + C L+ R + A + KM+K G P VTF L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C R DA + G P+ + Y+ ++ G + + +L+N M +G
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
PD+ TYNS + GL ++ + TR
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATR 242
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 180/396 (45%), Gaps = 18/396 (4%)
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL-NFISANPC-----------PCSNDG 146
+S + F+H H + FI+ L SS FS S+L IS +
Sbjct: 28 SSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQPH 87
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCR 204
+ S P I +NA V++ L F M R L+ P + +N L+ +K
Sbjct: 88 LDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLV---PGSNTFNNLLILLIKSN 144
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
F+KA ++ + VK DV +F I+I G C D + +M E G +PNVV +
Sbjct: 145 FFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYT 203
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G + G + Y+M EL + T +L++G G EL
Sbjct: 204 TLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLT 263
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G++P + Y ++ + C +G A E+ DE+ ++G +V+ TLI GL + R+ +EA
Sbjct: 264 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 323
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
LM +M ++G+ P+ +++N L++ C +G A L + G P TY+IL++G
Sbjct: 324 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 383
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ ++V EM G P TY MD L
Sbjct: 384 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 419
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 139/293 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLINGF K + Y++M + P+V T+N +I C + K + A LF EMR
Sbjct: 237 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 296
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G NVV++NTLI G ER+ E + M G + ++ L+DG C+ G +
Sbjct: 297 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 356
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L G P Y L+ N+ ++V E+ +G PS + T L+
Sbjct: 357 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILM 416
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L R +A + M K G++ D + L+ LC VG +A +L L
Sbjct: 417 DALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 476
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ + Y+ ++ GY +E L+ EM + G +P++A+YNS + L K
Sbjct: 477 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 1/321 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+ + +N F K DG+ +E M KL P+V YN +I + + A +
Sbjct: 234 QYTYTVLINGFFKMGLKKDGIELYEKM-KLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 292
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M V +VVT+N LI G C+ ++ A L M+ G +PN++S+NTLI G+
Sbjct: 293 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI 352
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+ ++ +M G S T IL+ G ++V + RG+ P Y
Sbjct: 353 GNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 412
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L N A ++ + K G + + LI GL + EAS L + + +
Sbjct: 413 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 472
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ P+ V +N ++ C G + A RL G+ P+ +Y+ + ++ + E
Sbjct: 473 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTE 532
Query: 454 GENLVNEMLDEGFIPDLATYN 474
E L+ +M++ G P ++ +N
Sbjct: 533 AEVLLKDMIELGLKPSISIWN 553
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 140 CPCSNDG----IFSCPEMERIFHFAVNAFVKANRMNDGLL----AFEAMRKLI----DG- 186
C C NDG F + R A N V N + GL EA R + DG
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNV-VTYNTLIGGLCQERRVLEAERLMCRMKRDGL 335
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P++ YN LI+G+ DKA +++M P + T+NILI+GF K
Sbjct: 336 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 395
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ REM +G +P+ V++ L+ ++ + M + G +L+ GLC
Sbjct: 396 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 455
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +L + P D Y ++ C EG++ AL ++ E+ + G +P+V
Sbjct: 456 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVA 515
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ + I+ L + K EA L++ M++ G+ P +N +
Sbjct: 516 SYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 324 RGVLPKDFDYFGLVEKLCGE-GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G + D FG++ K C E G EV+ ++ + G P+V+ TTLI+G +
Sbjct: 157 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
L KM + ++ + T+ L+ +G D L G+ P+ TY+ ++
Sbjct: 217 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ + L +EM + G ++ TYN+ + GL R+ + R
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 325
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ IYN +I G+ K +AL M + + P+V ++N I C+++K+ A
Sbjct: 476 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEV 535
Query: 247 LFREMREKGCNPNVVSFNTLIRGFF 271
L ++M E G P++ +N + + F
Sbjct: 536 LLKDMIELGLKPSISIWNMISKARF 560
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 168/329 (51%), Gaps = 5/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V KA + NDG+ + M RK+I P+V +NVLI+ FVK + +A Y
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKII---PNVITFNVLIDVFVKEGKLQEANELYK 299
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+ +T+N L+ G+C + A + M C+P++V+F +LI+G+ +
Sbjct: 300 EMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVK 359
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DEG+ + ++ + G ++VT ILV G C G++ A EL + GVLP Y
Sbjct: 360 RVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG 419
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G ALE+ ++L K ++ T +IEG+ + K +A L + +
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCK 479
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ ++ LC G +A+ L G +P+ TY+ L+ + R+
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L+ EM GF D ++ +D LS+A
Sbjct: 540 AKLIEEMKSCGFSADASSIKMVIDMLSSA 568
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 155/298 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LING + +A+ RMV + +P+VVT+N +++G C++ LAL L
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E+ +V +++T+I + D +++ EM G + S VT LV GLC
Sbjct: 193 LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ +L+ D + R ++P + L++ EG A E+ E+ KG P+ I
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++G + EA+ +++ M++ PD VTF L++ C V R + +L S
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL + +TY ILV G+ + + + E L EM+ G +PD+ TY +DGL + K
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGK 430
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 160/312 (51%), Gaps = 2/312 (0%)
Query: 176 AFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +++I RP S+ ++ +G ++F+ L F +M + + ++ T NI+I+
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FCR K A + ++ + G P+ +FNTLI G E K E V + M+E GC+
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT +V+G+C G A +L+ R V F Y +++ LC +G A+ +
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG S++ +L+ GL + K + L++ M I+P+ +TFN L++
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ +A+ L TKG+ P+ +TY+ L+ GY +NR E N+++ M+ PD+ T+
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348
Query: 474 NSYMDGLSNARK 485
S + G ++
Sbjct: 349 TSLIKGYCKVKR 360
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 147/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ S+ YN L+ G K +++ + M ++ P+V+TFN+LI F + K A
Sbjct: 237 KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM KG +PN +++N+L+ G+ + + E NM M+ C VT L+ G C
Sbjct: 297 LYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYC 356
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
RV + +L S+RG++ Y LV+ C G IA E+ E+ G LP V+
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++GL K +A + E + K + D V + ++E +C G+ DA L
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
KG+ P+ MTY +++SG ++ E L+ +M ++G P+ TYN+ +
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 151/299 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN ++NG K + AL +M VK DV T++ +I CR+ D A+
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG ++V++N+L+ G K+++GV + +M + +T +L+D
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++ +A EL + +G+ P Y L++ C + A ++D + + P ++
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G ++++ E L K+ K G++ ++VT++ L++ C G+ A+ L
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + ++ D+ Y ++G+ K
Sbjct: 407 VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 126/294 (42%), Gaps = 38/294 (12%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
DGR V L +G V +E D A+ + M+R R P +V F+ SG K+F+L
Sbjct: 28 DGR--VCYGERLRSGIVDIKE-DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLV 84
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L ++M G N+ + N +I F K ++ ++++LG E + T L++G
Sbjct: 85 LDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 144
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC E +V +A LV G P Y +V +C G+ +AL+
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD------------- 191
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
L+ KM + + D T++ +++ LC G A L
Sbjct: 192 ----------------------LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
TKG+ +TY+ LV G + + +G L+ +M IP++ T+N +D
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 33/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGF---------------V 201
F+ +N K ++ F + ++ +P++ YN L+ GF +
Sbjct: 228 FNIMINVLCKEGKLKKAK-GFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 202 KCREFDKALGFYD-----------------RMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
K + F + Y+ M + PD V++NILI G N ++A
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
EM ++G P ++NTLI G F E K + + E+ E G SVT IL++G
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G KA L + G+ P F Y L+ LC + A E+ +++ KG P
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ TL++G + A L+++M I PD VT+NCL+ LC G+ +A L
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+G+ PD ++Y+ L+SGY+++ K + +EML GF P L TYN+ + GLS +
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 485 K 485
+
Sbjct: 587 E 587
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 213/516 (41%), Gaps = 68/516 (13%)
Query: 17 SPPPPPAPSIPLPSRPET--PPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSL 74
SP S+ S PE+ PP+T + + + H++ + L TP+ + ++L
Sbjct: 23 SPAAARLSSLAQTSTPESVLPPITSEILLESIRSSQWHIVEHVADKL-TPS---LVSTTL 78
Query: 75 LHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTT---FLFIVRSLASSYRFSELHSV 131
L +K+ P F + + ID +R D T + ++ L+S ++L +
Sbjct: 79 LSLVKT-----PNLA------FNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQL--L 125
Query: 132 LNFISANPCPCSN---DGIFSCPEMER----IFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
+++ N + + + +E +F V + +++ + F M++
Sbjct: 126 KEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK- 184
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
P N ++ + + A FY M R +K +V TFNI+I+ C+ K A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
G M G P +V++NTL++GF + + + EM G + T ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+CNEGR A E++ + G++P Y L+ G+ +A DE+ K+G +P+
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TLI GL K A L+ ++ ++GI+ DSVT+N L+ C G A L
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA------------- 471
T G+ P TY L+ R+N+ +E + L +++ +G PDL
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 472 ----------------------TYNSYMDGLSNARK 485
TYN M GL K
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+LING+ + + KA +D M+ D ++P T+ LI CR K A LF ++
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P++V NTL+ G D ++ EM + VT L+ GLC EG+
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL+ + RRG+ P Y L+ +G+ A V DE+ G P+++ L+
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+GL + ++G A L+ +M EGI+P+ +F ++E + ++
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YNV+I G + R D+A+ MV + PD+ T++ILI+GFC K+ A +
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G P +++N LI GF + ++ + EM+ G E + + L++G+C
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ KA E++ + +GV P Y L+E C N A E++DE+ K+ P+V+
Sbjct: 368 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ +I GL R + ++ +M+ G+ P++V + L+ GR ++ +
Sbjct: 428 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 487
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G+ PD Y+ L+ G+ + R +E + EML+ P+ TY +++DG S A
Sbjct: 488 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 543
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 148/326 (45%), Gaps = 34/326 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IY LI G K +A + ++ RV DV T+++LI G RN K A G+
Sbjct: 563 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 622
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F E++EKG PN ++N+LI G + D+ + EM G VT IL+DGLC
Sbjct: 623 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 682
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP---- 363
G + +A L D RG+ P Y +V+ C N A ++++E+ +G P
Sbjct: 683 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 742
Query: 364 ------------------------------SVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
S ++ TLIEG + K EA+ L+E+M++
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 802
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ +P+ VT+ L++ C G +A RL L + + P TY L+ GY E
Sbjct: 803 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
L EM+ +G PD TY +D
Sbjct: 863 VSALFEEMVAKGIEPDKMTYYVMIDA 888
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE + ++ + P+V Y+V+ING +C MV + +KP+ V + L++
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+ + + + + MRE+G P+V +N+LI GF ++ +E EM+E
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
++ T +DG G + A + GVLP Y L+E C EGN A V
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + L V + LI GL R K EA G+ ++ ++G+LP++ T+N L+ C
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A +L KG++PD +TY+IL+ G + + +NL +++ G P+ TY
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708
Query: 474 NSYMDGLSNAR 484
+ +DG ++
Sbjct: 709 AAMVDGYCKSK 719
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 6/314 (1%)
Query: 178 EAMRKLIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
E K+ DG P V Y +I+ K A M P++VT+N++
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G CR + D A+ L R M +KG P++ +++ LI GF E++ E M EMI++G
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ +T L+DG +G + +A + + G+ + L+ +C G ALE
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++ E+ +KG P + LIEG R + A L+++M K + P +T++ ++ LC
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G + + GL P+ + Y L++ + +E R +E ++ M ++G +PD+
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496
Query: 472 TYNSYMDGLSNARK 485
YNS + G A++
Sbjct: 497 CYNSLIIGFCKAKR 510
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 143/285 (50%), Gaps = 1/285 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN+LI+G K E ++A +D + + P+ VT+ ++ G+C++K A L
Sbjct: 668 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 727
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G P+ +N ++ E KF++ +++ EM+E G S+V+ L++G C
Sbjct: 728 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCK 786
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A L+ + + +P Y L++ C G G A + E+ ++ +P+
Sbjct: 787 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 846
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L+ G + E S L E+M+ +GI PD +T+ +++ C G ++A +L+
Sbjct: 847 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 906
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
KG+ Y L+ ++ E L+NE+ + GF L T
Sbjct: 907 VKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPT 951
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 6/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F KA RM + M R+L RP+ Y I+G+ K E + A +++
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRL---RPNAHTYGAFIDGYSKAGEMEIADRYFN 554
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ V P+V + LI G C+ A +FR + + +V +++ LI G
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 614
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E + E+ E G ++ T L+ G C +G V KA +L+ + +G+ P Y
Sbjct: 615 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 674
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A + D++ +G P+ + +++G + + A L+E+ML
Sbjct: 675 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 734
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD+ +N +L C + A L KG ++++ L+ GY + + +E
Sbjct: 735 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEA 793
Query: 455 ENLVNEMLDEGFIPDLATYNSYMD 478
+L+ EM+++ FIP+ TY S +D
Sbjct: 794 NHLLEEMIEKQFIPNHVTYTSLID 817
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS+ N L+ +K + + +D M +V PDV T+ +IS C+ A
Sbjct: 177 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 236
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ EM EKGC+PN+V++N +I G R DE + + M++ G T +IL++G C
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R +A ++++ G+ P+ Y L++ +G+ A + DE+ +
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM---------V 347
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
AC GI + + +N LL +C G+ A +
Sbjct: 348 AC--------------------------GIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG++PD TY +L+ G+ R L++EM P + TY+ ++GL
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ +N K + L F+ M L G S +N LI G+ K + +A +
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEM--LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEE 799
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + P+ VT+ LI C+ A L+ EM+E+ P ++ +L+ G+
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 859
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EM+ G E +T +++D C EG V++AC+L + +G+ Y
Sbjct: 860 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDA 919
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC + L++++E+ + G + C+ + G + EA+ ++ M+K G
Sbjct: 920 LIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL 422
+ ++ + L++ + + D+D L
Sbjct: 980 WVSNTTSLGDLVDGNQNGANSEDSDNL 1006
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 128/304 (42%), Gaps = 35/304 (11%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+G P+ I+++L++ + K +A+ + +P +++ N L+ + K +L
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 199
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+F M P+V ++ +I + + EM E GC + VT +++ G
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC + +A EL +G++P + Y
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTY------------------------------- 288
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
LI G ++ EA ++ +M+ G+ P+ +T+N L++ G A R++
Sbjct: 289 ----DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 344
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G++ + + ++ L++G + + ++ ++ EM+++G PD TY+ ++G +
Sbjct: 345 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 404
Query: 485 KSVR 488
R
Sbjct: 405 NMAR 408
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 207/459 (45%), Gaps = 41/459 (8%)
Query: 62 LTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLAS 121
L + QITPS + L+++ +D A A + FRHDHTTF ++ L S
Sbjct: 6 LLKWSKQITPSKVEQLLRAERDLRKAKIIFDS---ASAEYSNGFRHDHTTFGVMISKLVS 62
Query: 122 SYRFSELHSVLNFISANPCP---------CSNDGIFSCP-EMERIFH------------- 158
+ F +LN + C C G P + R+FH
Sbjct: 63 ANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKS 122
Query: 159 ----FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK-CREFDKALGFY 213
FA+ V+ N++ + ++ MR++ R SV NVLI K D A +
Sbjct: 123 YISVFAI--LVEENQLKVAMSFYKYMREM-GVRQSVVSLNVLIKALCKNSGTIDAAFEIF 179
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M + PD T+ LI+G C+ K A LF+EM KGC+P+VV+++ L+ G
Sbjct: 180 REMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQA 239
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE + + +M + E + T L+DGLC G L+A EL+ R+ P Y
Sbjct: 240 GNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTY 299
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC EG A+E +D + +G P +I G +RK EA+ +++M+
Sbjct: 300 STLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVL 359
Query: 394 EGILPDSVTF-------NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
I P+ VT+ N +++ LC G + +L + T+G+ D T+ LV +
Sbjct: 360 GQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFC 419
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ + + +EM+ +G +PD +++ + G + RK
Sbjct: 420 KKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRK 458
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 8/231 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ +A +++ + F+ M+K P+V Y+ L++G K +A+ + MVR R
Sbjct: 233 MHGLCQAGNVDEAMGLFDKMKKKAI-EPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KP++VT++ LI+G C+ K A+ M+ +G P+ + +I GF RKF E
Sbjct: 292 HKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAA 351
Query: 281 NMAYEMIELGCEFSSVTCEI-------LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
EM+ + VT + +V GLC G + ++ +L I RG+ +
Sbjct: 352 TYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTF 411
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
LV+ C +G+ A + DE+ G +P + ++ G RK EA
Sbjct: 412 DSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREA 462
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K ++ + + + M KL +P +Y +INGF R+F +A + D MV +
Sbjct: 303 INGLCKEGKLAEAVETLDRM-KLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQ 361
Query: 221 VKPDVVTF-------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ P+ VT+ N+++ G C N + + L+ MR +G + + +F++L++ F +
Sbjct: 362 ISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKK 421
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
+ + EM+ GC +V G + +V +A E ++
Sbjct: 422 GDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFESIV 467
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 165/326 (50%), Gaps = 7/326 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ A+N V+A + + F R + P+ Y LI+G K + D+A D M
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREERCV----PNEFTYGSLIHGLCKAGKLDQAYELLDEM 56
Query: 217 VRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
RDR + P V N +I G C+ +F ALG F+ + C P++++FN L+ +
Sbjct: 57 -RDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGR 115
Query: 276 FDEGVNMAYEM-IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + M C + VT +++GLC +G++ +A EL+ + G P Y
Sbjct: 116 VEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYS 175
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LVE LC G ++ E+ ++G P VI TL+ GL + R+ EA L++ M++
Sbjct: 176 VLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRS 235
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P VT+N L+E C + A RL + S +G PD + Y+ +++G R+ R +
Sbjct: 236 GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDA 295
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L+ +M+ +PD+ TY++ +DGL
Sbjct: 296 QALLKQMVAARCVPDVITYSTIIDGL 321
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 12/346 (3%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFD 207
C E + ++ KA +++ A+E + ++ D P V+++N +I G K F
Sbjct: 26 CVPNEFTYGSLIHGLCKAGKLDQ---AYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFG 82
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTL 266
ALG++ + + PD++TFNIL+ ++ + + A +F M C PNVV++ T+
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G + K D + + M E GC + +T +LV+GLC GR K L+ + +RRG
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L+ LC ALE+V + + G P+V+ +L+E R ++ A
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L++ M + G PD + +N ++ LC R DA L PD +TY ++ G
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322
Query: 447 RENR-----RKEGENLVNEMLDE-GFIPDLATYNSYMDGLSNARKS 486
++ R + E + EM+ + G P+ TY ++GL ARKS
Sbjct: 323 KDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKS 368
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 177/388 (45%), Gaps = 41/388 (10%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F IF T + T+ ++ L + +L+ ++ C CP
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGC---------CPN 170
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ + V KA R + G + M + +P V +YN L+NG K R D+AL
Sbjct: 171 V-ITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNTLLNGLCKSRRLDEALEL 228
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
M+R P VVT+N L+ FCR+K+ D A L + M E+GC P+V+++NT+I G
Sbjct: 229 VQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCR 288
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + D+ + +M+ C +T ++DGLC + RV D D
Sbjct: 289 DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV------------------DAD 330
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ +E C E+++ + + G P+ +IEGL R RK +A L+ +M+
Sbjct: 331 W--KLEAAC---------EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMI 379
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++PD +F+ ++ LC A ++ + S + P+ + Y L+ G ++
Sbjct: 380 DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVD 439
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ V E++ E F P +ATYNS +DGL
Sbjct: 440 KAVR-VFELMVESFRPGVATYNSVLDGL 466
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N +N V+ + +A+ + +R P+ T+ LI G C+ K D A L EMR+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P V N +IRG +F + + + C +T ILVD L GRV +
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A F + E + LP+V+ TT+I
Sbjct: 119 A-------------------FQIFESMHTSSQC---------------LPNVVTYTTVIN 144
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + K A L++ M + G P+ +T++ L+E LC GRT L + +G P
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQP 204
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
D + Y+ L++G + R E LV M+ G P + TYNS M+ +++ R R
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y V+I G + R+ +AL RM+ V PD+ +F+++I C++ D A +
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGL 305
F M E+ C PN V++ LI G + D+ V + M+E F T ++DGL
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE---SFRPGVATYNSVLDGL 466
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR+ +A +V + P Y L+ LC A E+ + KG V
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L + ++ +A G+ K+++ G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREF 206
CP ++ + + R++D A +++++ R P V Y+ +I+G K
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDD---AQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327
Query: 207 DK------ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
D A + M + P+ T+ ++I G CR +K AL L R M + P++
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC---EL 317
SF+ +I D + M E C+ + V L+DGL G V KA EL
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+++ R GV Y +++ LCG G A+ +V+ + K P + LI GL R
Sbjct: 448 MVESFRPGVAT----YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ EA L + + +G + +N L+ +LC R DA
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPC---PCSNDGIFSCPEMERIFHFAVNAF 164
D ++F ++ SL S+ + + +S C P + + ++
Sbjct: 386 DLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVA-------------YAALIDGL 432
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K ++ + FE M + RP V+ YN +++G ++A+ + M+ PD
Sbjct: 433 SKGGEVDKAVRVFELMVESF--RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPD 490
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
++ LI G CR + A LF+ + KG V +N L+ +++ + +A
Sbjct: 491 GASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVAN 550
Query: 285 EMIELG 290
++IE G
Sbjct: 551 KLIEAG 556
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N +I FV+ D A+ Y +M R+ ++ +FNILI FC K +L F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGCNPNVVSFNTLIRGF------------FG---ERKFDEGVNMAYEMIELGCEFSSVTC 298
G P+VV+FNTL+ G FG E F E V + +M+E+G +T
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L++GLC EGRVL+A LV +G+ Y +V +C G+ AL ++ ++ +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
P V+ + +I+ L + +A L +ML++GI P+ T+NC+++ C GR D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A RL + ++PD +T++ L+S +E + E E L +EML PD TYNS +
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 479 GL 480
G
Sbjct: 410 GF 411
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++ K +D F E + K I P+V YN +I+GF + A
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDV+TFN LIS + K A L EM + P+ V++N++I GF
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+FD+ A M +L VT ++D C RV + +L+ + SRRG++ Y
Sbjct: 416 RFDD----AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C N A ++ E+ G P I C L+ G K EA L E +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D+V +N ++ +C + +A L G++PD TY++++SG+ ++ +
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L ++M D G PD +TYN+ + G A
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 26/342 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE----------- 205
F+ + F ++++ L F + KL +P V +N L++G C E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGL--CLEDRISEALALFG 200
Query: 206 ------FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
F +A+ +D+MV + P V+TFN LI+G C + A L +M KG + +
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VV++ T++ G +N+ +M E + V ++D LC +G A L
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ +G+ P F Y +++ C G A ++ ++ ++ P V+ LI +
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTY 438
K EA L ++ML I PD+VT+N ++ C R DA + L+AS PD +T+
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTF 435
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ Y R R EG L+ E+ G + + TYN+ + G
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 161/409 (39%), Gaps = 86/409 (21%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMV 217
+ FV+ NR + +A RK+ R ++IY N+LI F C + +L + ++
Sbjct: 112 VIGVFVRMNRPD---VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLF---------------REMREKGCNPNVVS 262
+ +PDVVTFN L+ G C + AL LF +M E G P V++
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FNTLI G E + E + +M+ G VT +V+G+C G A L+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL------- 375
+ P Y ++++LC +G+ A + E+ +KG P+V +I+G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 376 ---RRLR-------------------------KGVEASGLMEKMLKEGILPDSVT----- 402
R LR K EA L ++ML I PD+VT
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 403 --------------------------FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
FN +++ C R + +L S +GL +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ L+ G+ + ++L EM+ G PD T N + G K
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 157 FHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ + +A R+++G LL + R L+ + + YN LI+GF + + A +
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLV---ANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ V PD +T NIL+ GFC N+K + AL LF ++ + + V++N +I G
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K DE ++ + G E T +++ G C + + A L G P + Y
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG 360
L+ G ++E++ E+ G
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ F+D MVR R V N +I F R + D+A+ L+R+M + N+ SF
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N L I+ C+ C L L G++ K
Sbjct: 145 NIL--------------------IKCFCD-----CHKLSFSLSTFGKLTKL--------- 170
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G P + L+ LC E AL + + + G L E
Sbjct: 171 -GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------E 209
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L ++M++ G+ P +TFN L+ LC GR ++A L KGL D +TY +V+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + K NL+++M + PD+ Y++ +D L
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F + ++ + L FE ++ +V+ YN++I+G K + D+A + + V+
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVA-YNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+N++ISGFC A LF +M++ G P+ ++NTLIRG + D+ + +
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
EM G + T +++ D L +GR+ K+
Sbjct: 630 ISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 187/414 (45%), Gaps = 22/414 (5%)
Query: 69 ITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSEL 128
+ P S H +K H + ++ F S +F+H H T+ ++ L + +
Sbjct: 36 VCPVSESHVVKVLRQEHDIVSSLEY--FKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGV 93
Query: 129 HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
+L + PCS + +F F + + ++N GL F +R+ P
Sbjct: 94 SYLLQQMKLENVPCS----------QELFQFVIKCYRRSNLGEQGLKMFYRIREF-GCEP 142
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
SV IYN++++ + F Y+ M + ++P+V T+N+L+ C+N K D A L
Sbjct: 143 SVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLL 202
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV--TCEILVDGLC 306
EM KGC+P+ VS+ T+I D+ EL +F V L+ G+C
Sbjct: 203 VEMSNKGCDPDDVSYTTVISSMCKLGDVDKAR-------ELAMKFEPVVPVYNALIHGVC 255
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E R +A +L+ + RGV P Y ++ L GN ++L V ++ +G P+V
Sbjct: 256 KECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQ 315
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G + +A GL M++EG+ P+ V +N L+ LC G +A +
Sbjct: 316 TFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQM 375
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ P+ TY ++ G+ + N+M++ G P++ Y +D L
Sbjct: 376 EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVL 429
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V +YN LI+G K F +A + MV V P+V++++ +IS +L+L
Sbjct: 241 EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLA 300
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M +GC PNV +F +LI+GFF + + V + MI G + V L+ GLC
Sbjct: 301 VFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLC 360
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++G + +A + + + P Y ++ G+ A E +++ G P+V+
Sbjct: 361 SDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVV 420
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T +++ L ++ +A L++ M+ +G P +TFN ++ LC GR A +
Sbjct: 421 VYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQM 480
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
P+ TY+ L+ G R N +E L+ E+ + D TYN+ M G S
Sbjct: 481 EKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFS 535
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 145/330 (43%), Gaps = 36/330 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+V + LI GF A+G ++ M+R+ V P+VV +N LI G C + D A+
Sbjct: 311 RPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAIS 370
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ +M + PNV +++T+I GF +MI GC + V +VD LC
Sbjct: 371 VWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLC 430
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+A +L+ + G P + ++ LC G A+ V+D++ K LP++
Sbjct: 431 QMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIR 490
Query: 367 ACTTLIEGLRRLRKGVEASGLME-----------------------------------KM 391
L++GL R EA GL+ KM
Sbjct: 491 TYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM 550
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRENR 450
L GI D++T N + C +G+ A + L +++ K D +T+ I++ G
Sbjct: 551 LVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLG 610
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+E ++EML G P++AT+N + G
Sbjct: 611 TEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 3/239 (1%)
Query: 172 DGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
D + A E K+I+ RP+V +Y +++ + FD+A D M+ D P V+TFN
Sbjct: 399 DLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFN 458
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
I G CR + + A+ + +M + C PN+ ++N L+ G F F E + E+ E
Sbjct: 459 NFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEER 518
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
EF VT ++ G G + +L+ G+ V C G A
Sbjct: 519 KVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTA 578
Query: 350 LEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
++V+D + + +I T ++ G+ EA + +MLK GI P+ T+N L+
Sbjct: 579 IKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLV 637
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
N +N + K + A+ D + ++ + D++T I++ G C + A+ EM
Sbjct: 563 NTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEML 622
Query: 253 EKGCNPNVVSFNTLIRGFFGE 273
++G PN+ ++N L+RGFF +
Sbjct: 623 KRGIFPNIATWNVLVRGFFSK 643
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 5/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ K R+ L+ M + G P V Y +I+ +A F + M
Sbjct: 18 IQGLCKVKRLEQALIFLGKM--VSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANR 75
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+VVT+ +LI G C+ + D A+ L +MR+K C P V++N+LI G + E
Sbjct: 76 NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEA 134
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ EM+ GC T L+ G C + A + RG P Y L++
Sbjct: 135 YDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDG 194
Query: 340 LCGEGNAGIALEVVDELWKKGN-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC EG A+++ + K G+ +P+ + +LI G R+ K EA L+E+M + G P
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT+ L+ C + R DA L + KGL PD +T+ L+ G RENR + +++
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
EM + P + TYN+ +DG A +
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQ 341
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 169/365 (46%), Gaps = 40/365 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++A NR+++ E M R L P+V Y VLI+G K D+A+
Sbjct: 49 YTAVIHALCVENRLHEARKFLEEMANRNLT---PNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M R + P VT+N LISG C+ ++ A L EM GC P++ ++ TLI GF +
Sbjct: 106 KM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK 164
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKDFDY 333
K D+ + + +++ G VT L+DGLC EGR+ +A +L + G +P Y
Sbjct: 165 KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C G A+ +++ + + G+ P V+ TTL+ G +L + +A L+ +M +
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD VTF L++ LC R DA + K P TY+ ++ GY R N+ +E
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Query: 454 GENLVNEMLD------------EGFI---------------------PDLATYNSYMDGL 480
+ E +D G PD+ Y + +DGL
Sbjct: 345 ARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 481 SNARK 485
+K
Sbjct: 405 CREKK 409
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI G K + ++AL F +MV PDV T+ +I C + A EM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ PNVV++ LI G + DE V + +M + C ++VT L+ GLC R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERAS 132
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L+ + G +P F Y L+ C + AL V ++L +G P V+ + LI
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 373 EGLRRLRKGVEASGLMEKMLKEG-ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+GL + + EA L +M+K G +P++VT+N L+ C +G+ +A L + G
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY L++G+ + R + +L+N+M +G PD+ T+ S MDGL
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 163/311 (52%), Gaps = 7/311 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ K R+ + + F M K P+ YN LI+GF + + D+A+ +RM
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PDVVT+ L++GFC+ + D A L +M KG P+VV+F +L+ G E +
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ V++ EM C + T ++DG C ++ +A + +++ P + +
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIM 365
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-G 395
+ LC + A+E+V+E ++ P V+ TT+I+GL R +K EA + KML+E G
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
LP+S+T++ L+ LC+ G DR R KG P+ TY++L+ + + NR ++
Sbjct: 426 CLPNSITYSTLVTGLCNAGML---DRARGYIE-KGCVPNIGTYNLLIDAFRKANRDEDAR 481
Query: 456 NLVNEMLDEGF 466
L+++M+ GF
Sbjct: 482 ELLDDMVQRGF 492
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 42/365 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ KA R ++ A++ + +++ P + Y LI GF K ++ D AL ++
Sbjct: 118 YNSLISGLCKAERASE---AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGE 273
++V +PDVVT++ LI G C+ + A+ LF M + G C PN V++N+LI GF
Sbjct: 175 QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 234
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K DE +N+ M E G VT L++G C R+ A +L+ +R+G+ P +
Sbjct: 235 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM-EKML 392
L++ LC E A+ ++ E+ +K P+V T+++G R + EA M E+M
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM- 353
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
P+ V+FN ++ LC V R+ +A L A + +PD + Y ++ G RE +
Sbjct: 354 --DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411
Query: 453 EGENLVNEMLDE--------------------------------GFIPDLATYNSYMDGL 480
E + +ML+E G +P++ TYN +D
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAF 471
Query: 481 SNARK 485
A +
Sbjct: 472 RKANR 476
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 4/259 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D VT+ LI G C+ K+ + AL +M KG +P+V ++ +I E + E
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM + VT +L+DGLC GRV +A L+ R+ +P Y L+ LC
Sbjct: 69 LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCK 127
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A A ++++E+ G +P + TTLI G + +K +A + E+++ G PD VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 403 FNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++CL++ LC GR +A L R++ S + P+ +TY+ L+SG+ R + E NL+
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 461 MLDEGFIPDLATYNSYMDG 479
M + G PD+ TY + M+G
Sbjct: 247 MAETGSSPDVVTYTTLMNG 265
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C VT L+ GLC R+ +A + +G P + Y ++ LC E A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ ++E+ + P+V+ T LI+GL + + EA L+ KM K+ + P +VT+N L+ L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C R +A L G PD TY L++G+ + + + + +++ GF PD+
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 471 ATYNSYMDGL 480
TY+ +DGL
Sbjct: 186 VTYSCLIDGL 195
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC AL + ++ KG P V T +I L + EA +E+M
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P+ VT+ L++ LC GR +A L L K P +TY+ L+SG + R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVAL-LSKMRKKCVPTAVTYNSLISGLCKAERAS 132
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E +L+ EM+ G IPD+ TY + + G ++KS
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 198/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ + + FSE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + L F+ RK+++
Sbjct: 61 ILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L + F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++DE+ KG P I TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL PD TY ++++ ++ +G L+ EM +G P
Sbjct: 361 GLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L + C EG+ +A V D + K G PSV++ TL+ G RL E L M G
Sbjct: 148 LXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + A+ L KGL P+G+T+ L+ G+ + R
Sbjct: 208 VXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGL 292
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E+ L+ G FN L C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESK 227
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 152/297 (51%), Gaps = 10/297 (3%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N +I FV+ D A+ Y +M R+ ++ +FNILI FC K +L F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS----------VTCEILVD 303
G P+VV+FNTL+ G E + E + + M+E G F +T L++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC EGRVL+A LV +G+ Y +V +C G+ AL ++ ++ + P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ + +I+ L + +A L +ML++GI P+ T+NC+++ C GR DA RL
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++PD +T++ L+S +E + E E L +EML PD TYNS + G
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++ K +D F E + K I P+V YN +I+GF + A
Sbjct: 293 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLR 350
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDV+TFN LIS + K A L EM + P+ V++N++I GF
Sbjct: 351 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 410
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+FD+ A M +L VT ++D C RV + +L+ + SRRG++ Y
Sbjct: 411 RFDD----AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 466
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C N A ++ E+ G P I C L+ G K EA L E +
Sbjct: 467 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 526
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D+V +N ++ +C + +A L G++PD TY++++SG+ ++ +
Sbjct: 527 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 586
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L ++M D G PD +TYN+ + G A
Sbjct: 587 NVLFHKMKDNGHEPDNSTYNTLIRGCLKA 615
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 17/335 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY--- 213
F+ + F ++++ L F + KL +P V +N L++G +AL +
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 214 -------DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D+MV + P V+TFN LI+G C + A L +M KG + +VV++ T+
Sbjct: 203 VETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 262
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ G +N+ +M E + V ++D LC +G A L + +G+
Sbjct: 263 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 322
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F Y +++ C G A ++ ++ ++ P V+ LI + K EA
Sbjct: 323 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 382
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGY 445
L ++ML I PD+VT+N ++ C R DA + L+AS PD +T++ ++ Y
Sbjct: 383 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDVY 437
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R R EG L+ E+ G + + TYN+ + G
Sbjct: 438 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 472
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 161/404 (39%), Gaps = 81/404 (20%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMV 217
+ FV+ NR + +A RK+ R ++IY N+LI F C + +L + ++
Sbjct: 112 VIGVFVRMNRPD---VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLF----------REMREKGCNPNVVSFNTLI 267
+ +PDVVTFN L+ G C + AL LF +M E G P V++FNTLI
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLI 228
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G E + E + +M+ G VT +V+G+C G A L+ +
Sbjct: 229 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 288
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL----------RR 377
P Y ++++LC +G+ A + E+ +KG P+V +I+G R
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348
Query: 378 LR-------------------------KGVEASGLMEKMLKEGILPDSVT---------- 402
LR K EA L ++ML I PD+VT
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408
Query: 403 ---------------------FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
FN +++ C R + +L S +GL + TY+ L
Sbjct: 409 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 468
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ + ++L EM+ G PD T N + G K
Sbjct: 469 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 512
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ + +A R+++G+ + R L+ + + YN LI+GF + + A +
Sbjct: 430 FNTIIDVYCRAKRVDEGMQLLREISRRGLV---ANTTTYNTLIHGFCEVDNLNAAQDLFQ 486
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ V PD +T NIL+ GFC N+K + AL LF ++ + + V++N +I G
Sbjct: 487 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 546
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K DE ++ + G E T +++ G C + + A L G P + Y
Sbjct: 547 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 606
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG 360
L+ G ++E++ E+ G
Sbjct: 607 TLIRGCLKAGEIDKSIELISEMRSNG 632
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F + ++ + L FE ++ +V+ YN++I+G K + D+A + + V+
Sbjct: 506 GFCENEKLEEALELFEVIQMSKIDLDTVA-YNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 564
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+N++ISGFC A LF +M++ G P+ ++NTLIRG + D+ + +
Sbjct: 565 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 624
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
EM G + T +++ D L +GR+ K+
Sbjct: 625 ISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 655
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDK 208
C R F F ++ K+ R+ D L F+AM + +G PSV YN +I G+ K +
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ--NGVVPSVMTYNAMIVGYSKLGRMND 341
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL + M ++ PD T+N LI G C ++K + A L ++G P VV+F LI
Sbjct: 342 ALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLIN 400
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ KFD+ + M +M+ C+ L++ L + R+ +A EL+ + S G++P
Sbjct: 401 GYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP 460
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y +++ C G IALEV+ + + G P+ +L+ GL + +K +A L+
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 520
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
KM K+GI+P+ +T+ LL+ CD +A RL + GL PD Y +L +
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R +E + + + +G Y + +DG S A
Sbjct: 581 GRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKA 612
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 175/425 (41%), Gaps = 61/425 (14%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D F ++ SL R E +LN ISAN G+ P + + ++ + K+
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISAN-------GLV--PNV-ITYTSIIDGYCKS 475
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++ L + M + DG +P+ YN L+ G VK ++ KA+ +M +D + P+V+
Sbjct: 476 GKVDIALEVLKMMER--DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPN--------------------------- 259
T+ L+ G C FD A LF M + G P+
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 260 -----VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
V + TLI GF D + MI+ GC S T +L+ LC + R+ +A
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ S RG+ F Y L++++ EG A + +E+ G+ PS T I
Sbjct: 654 LPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINS 713
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + +A L+ KM +EG+ PD VT+N L++ +G A +P+
Sbjct: 714 YCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Query: 435 GMTYHILVS-------GYTRENRRKEGENLV---------NEMLDEGFIPDLATYNSYMD 478
TY +L+ Y R NL+ M+ G P + TY+S +
Sbjct: 774 YWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIA 833
Query: 479 GLSNA 483
G A
Sbjct: 834 GFCKA 838
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 172/414 (41%), Gaps = 37/414 (8%)
Query: 96 FAWASTIDSFRH---DHTTFLFIVRSLASSYRFSELH-SVLNFI-SANPCPCSNDGIFSC 150
F W + D FRH H L ++ + ++ L S+LN +A S D I +
Sbjct: 77 FEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAI 136
Query: 151 PEME--------RIFHFAVNAF-----------VKANRMNDGLLAFEAMRKLIDGRPSVS 191
+ ++FA+ + V + + DGLL P
Sbjct: 137 RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLL------------PDTV 184
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
YN +I + K + A + ++ ++P+ T N L+ G+CR + A LF M
Sbjct: 185 TYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMM 244
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
GC N S+ LI+G + E + + M GC + L+ GLC GRV
Sbjct: 245 PLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRV 304
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A L + GV+P Y ++ G AL++ + + K G P TL
Sbjct: 305 GDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL +K EA L+ +KEG P VTF L+ C + DA R++ +
Sbjct: 365 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D + L++ +++R KE + L+NE+ G +P++ TY S +DG + K
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 32/351 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI----YNVLINGFVKCREFDKA 209
E + +A KA R A EA ++ R V++ Y LI+GF K D A
Sbjct: 567 EHAYAVLTDALCKAGR------AEEAYSFIV--RKGVALTKVYYTTLIDGFSKAGNTDFA 618
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+RM+ + PD T+++L+ C+ K+ + AL + +M +G + ++ LI
Sbjct: 619 ATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDE 678
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E K D M EM G + S+ T + ++ C EGR+ A +L++ R GV P
Sbjct: 679 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPD 738
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDEL---------WK---------KGNLPSVIACTTL 371
Y L++ G A + + W KGNL V + T
Sbjct: 739 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT- 797
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G+ L + L+E+M+K G+ P T++ L+ C GR +A L KGL
Sbjct: 798 -SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL 856
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
P+ Y +L+ ++ + V+ M + GF P L +Y + GL N
Sbjct: 857 SPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 27/323 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ +L R +E +L+ +S C+ IF+ + ++ ++
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT---IFA-------YTILIDEMLRE 682
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + M +PS + Y V IN + K + A +M R+ V PDVVT
Sbjct: 683 GKHDHAKRMYNEMTS-SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR----------------GFF 271
+NILI G D A + M C PN ++ L++ G +
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ D + M++ G + T L+ G C GR+ +AC L+ +G+ P +
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C AL V + + G P + + L+ GL + L +
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921
Query: 392 LKEGILPDSVTFNCLLEDLCDVG 414
L+ G D V + L + L G
Sbjct: 922 LELGYNHDEVAWKILNDGLLKAG 944
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V+ Y+ LI GF K ++A D M + P+ + +LI C K F+ AL
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSF 882
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M E G P + S+ L+ G E F++ ++ +++ELG V +IL DGL
Sbjct: 883 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 942
Query: 308 EGRV 311
G V
Sbjct: 943 AGYV 946
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+ +V +G E D +RMV+ + P V T++ LI+GFC+ + + A L M
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
KG +PN + LI+ + F++ ++ M E G + + +LV GLCNEG
Sbjct: 852 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
K L D G + + L + L G I +++ + K+
Sbjct: 912 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 145/297 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y LI+GF K + A F+ M + PDV+T+ +ISGFC+ A L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG P+ V+F LI G+ + + MI+ GC + VT L+DGLC
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + A EL+ + + G+ P F Y +V LC GN A+++V E G +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + + +A ++++ML +G+ P VTFN L+ C G D ++L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ T++ LV Y N K + +M G PD TY + + G AR
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y +I+GF + + +A + M ++PD VTF LI+G+C+ A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M + GC+PNVV++ TLI G E D + +EM ++G + + T +V+G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC G + +A +LV +F G+ Y L++ C G A E++ E+ KG P+
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ L+ G + L+ ML +GI P++ TFN L++ C A +
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G+ PDG TY LV G+ + KE L EM +GF ++TY+ + G +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 485 K 485
K
Sbjct: 681 K 681
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN + + ++ E M++ +P+ IY +I + + +A + M+R
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD V + LI GFC+ A F EM + P+V+++ +I GF E
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +EM G E SVT L++G C G + A + + G P Y L++
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC EG+ A E++ E+WK G P++ +++ GL + EA L+ + G+ D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+VT+ L++ C G A + KGL P +T+++L++G+ ++GE L+N
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 460 EMLDEGFIPDLATYNS 475
ML +G P+ T+NS
Sbjct: 586 WMLAKGIAPNATTFNS 601
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ ++NG+ + E DK + M R +KP+ + +I CR K A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +G P+ V + TLI GF YEM +T ++ G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +++A +L + +G+ P + L+ C G+ A V + + + G P+V+
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+GL + A+ L+ +M K G+ P+ T+N ++ LC G +A +L
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL+ D +TY L+ Y + + + ++ EML +G P + T+N M+G
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVN 281
+V ++NI+I C+ + A L M KG P+V+S++T++ G+ FGE ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE------LD 298
Query: 282 MAYEMIEL----GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+++IE+ G + +S ++ LC ++ +A E + R+G+LP Y L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C G+ A + E+ + P V+ T +I G ++ VEA L +M +G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PDSVTF L+ C G DA R+ G P+ +TY L+ G +E L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNA 483
++EM G P++ TYNS ++GL +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKS 504
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN-KKFDLALGLFRE 250
+++V V +A +++M+ + V + N+ ++ ++ K A+ +FRE
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
E G NV S+N +I + E ++ M G ++ +V+G C G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ K +L+ R+G+ P + Y ++ LC A E E+ ++G LP + TT
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G + AS +M I PD +T+ ++ C +G V+A +L KG
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+PD +T+ L++GY + K+ + N M+ G P++ TY + +DGL
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN ++NG K ++A+ + D VT+ L+ +C++ + D A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +EM KG P +V+FN L+ GF ++G + M+ G ++ T LV C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ A + D RGV P Y LV+ C N A + E+ KG SV
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ LI+G + +K +EA + ++M +EG+ D F+
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 40/320 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + KA M D AF +I P+V Y LI+G K + D A M +
Sbjct: 428 INGYCKAGHMKD---AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++P++ T+N +++G C++ + A+ L E G N + V++ TL+ + + D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+ G + + VT +L++G C G + +L+ +G+ P + LV+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C + NL + A+ + + M G+ P
Sbjct: 605 QYC----------------IRNNLKA-------------------ATAIYKDMCSRGVGP 629
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+ L++ C +A L KG TY +L+ G+ + + E +
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 459 NEMLDEGFIPDLATYNSYMD 478
++M EG D ++ + D
Sbjct: 690 DQMRREGLAADKEIFDFFSD 709
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E E+G ++ + I++ +C GR+ +A L++ +G P Y +V C G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
++++ + +KG P+ ++I L R+ K EA +M+++GILPD+V +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G A + ++ + PD +TY ++SG+ + E L +EM +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 465 GFIPDLATYNSYMDGLSNA 483
G PD T+ ++G A
Sbjct: 416 GLEPDSVTFTELINGYCKA 434
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N+ VK + + L A A+ K + R P Y L+ G K R +A + M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V T+++LI GF + KKF A +F +MR +G + F+ FF + K+
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD-----FFSDTKY 712
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 147/298 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y ++ K + D AL + M +KPD +N ++SG C+ +K + A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M ++ NPNVV++NTLI G + + + EM G + V+ L+DG C
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ ++ A ++ R +P Y L++ L G A EV+D + KKG P+V
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ LI+G ++R+ EA L+E+M+ +GI P VT+N LL LC + DA +L +
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ P +TY+ L+ + L EM+ +G PD TY++ GL+ A K
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGK 304
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V K R++D L E M R + +P IYN +++G + + ++A +++MV+
Sbjct: 16 VERLCKTKRIDDALATVEEMATRGI---KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 72
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
R+ P+VVT+N LI+G C+ + + A LF+EM KG P VS+NTLI GF ++
Sbjct: 73 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVA 132
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ +M+ C + VT L+DGL G+V A E++ ++GV P Y L++
Sbjct: 133 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 192
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C A ++++++ +G P+V+ L+ L R K +A L M + P
Sbjct: 193 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 252
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
VT+N LL LC + A RL KG PD +TY L G TR + E + L+
Sbjct: 253 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 312
Query: 459 NEM 461
+M
Sbjct: 313 EKM 315
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P + ++E L + ++ +A +E+M GI PD+ +N +L LC + +A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ ++P+ +TY+ L++G + R + L EM +G++P +YN+ +DG
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 483 ARKSV 487
+ V
Sbjct: 127 KKDLV 131
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N+ +A+++ D AF+ R + R P+V YN L+ ++ D A Y
Sbjct: 222 YNILLNSLCRADKLED---AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 278
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
M+ PD +T++ L G R K A L +M+ NP
Sbjct: 279 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 198/442 (44%), Gaps = 40/442 (9%)
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ ITPS ++ ++++ +D A A + + HD ++F ++V L S+ +F
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSMAVFDS---ATAEYANGYVHDQSSFGYMVLRLVSANKF 67
Query: 126 SELHSVLNFISANPCPCSNDGI-------------------------FSCPEMERIFHFA 160
++ + C S D + F C ++ +
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFYDRMV 217
+ V+ N++N ++ MR+ I P+V+ NVLI CR D L + M
Sbjct: 128 LAILVEENQLNLAFKFYKNMRE-IGLPPTVASLNVLIKAL--CRNDGTVDAGLKIFLEMP 184
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD T+ LISG CR + D A LF EM EK C P VV++ +LI G G + D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + EM G E + T L+DGLC +GR L+A EL RG P Y L+
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC E A+E++D + +G P +I G + K EA+ +++M+ GI
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 398 PDSVTFNCLLEDLCDVGRTVDAD------RLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
P+ +T+N ++ +V R + A+ L L ++G+ + T LV ++
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Query: 452 KEGENLVNEMLDEGFIPDLATY 473
++ LV+E++ +G IP T+
Sbjct: 425 QKAVQLVDEIVTDGCIPSKGTW 446
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 214 DRMVRDRVKPDVVTFNILISGFCR-----NKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
D +VR +++ VV+ +IL+S CR ++ FD +L +F +M++ C+P+ ++ T++
Sbjct: 72 DLIVRMKIENCVVSEDILLS-ICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC-NEGRVLKACELVIDFSRRGVL 327
E + + M E+G + + +L+ LC N+G V ++ ++ +RG
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y L+ LC G A ++ E+ +K P+V+ T+LI GL + EA
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E+M +GI P+ T++ L++ LC GR++ A L + +G P+ +TY L++G +
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + +E L++ M +G PD Y + G K
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 329 KDFD-------YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
KDFD Y ++ L E +A + + + G P+V + LI+ L R
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT 172
Query: 382 VEAS-GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
V+A + +M K G PDS T+ L+ LC GR +A +L K P +TY
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L++G E + EM +G P++ TY+S MDGL +S++
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 44/428 (10%)
Query: 96 FAWAS--TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC--- 150
F W S T +FRH ++ ++ L + E +++ + + S +F+
Sbjct: 2 FTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILE 61
Query: 151 ---PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID-------- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 62 TKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYF 121
Query: 186 -------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
G P S+ +N+L++ F K E A +D + + ++P VV+FN L
Sbjct: 122 KLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 181
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
++G+ + + L + M+ G P+V +++ LI G E K D+ + EM++ G
Sbjct: 182 MNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGL 241
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT L+DG C GRV A E+ + + P Y L+ LC +G+ A +
Sbjct: 242 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQD 301
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++DE+ KG P I TTLI+G + A +M+KE I D V + L+ LC
Sbjct: 302 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLC 361
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
GR+VDA+++ + GL P+ TY ++++ + ++ G L+ EM +G++P +
Sbjct: 362 QEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 421
Query: 472 TYNSYMDG 479
TYN M+G
Sbjct: 422 TYNVLMNG 429
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 183/395 (46%), Gaps = 14/395 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F F WA +RH F ++ L+++ V+ + G+ E
Sbjct: 111 FEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRR-------GVRRGTE 163
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALG 211
F + ++ +A ++ + M+K DG P +SI N+ +N V DKAL
Sbjct: 164 Q---FAQLMLSYSRAGKLRSAMRVLHLMQK--DGCAPDISICNMAVNVLVVAGRVDKALE 218
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F +RM R V+PDV T+N LI G C ++ A+ + M + GC P+ +S+ T++
Sbjct: 219 FAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLC 278
Query: 272 GERKFDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E++ +E + M F VT +L+ GL G +A E + + + +
Sbjct: 279 KEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDE 338
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V C G A E+V E+ KG P V+ +T+++G R+ + +A +M+
Sbjct: 339 VGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKH 398
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K P++VT LL LC VG+T +A L + + P +TY +++ G+ RE +
Sbjct: 399 MYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGK 458
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE ++V +ML +GF P N + L RK
Sbjct: 459 LKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRK 493
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 12/371 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV-K 166
D T+ +++ L + R + ++ + N CP P+ +I ++ V +F+ K
Sbjct: 231 DVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCP---------PD--KISYYTVMSFLCK 279
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+ + + MR P YNVLI+G K D+AL F R + D V
Sbjct: 280 EKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEV 339
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
++ ++ FC N + A + EM KGC P+VV+++T++ GF + D+ M M
Sbjct: 340 GYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM 399
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ C+ ++VT L++GLC G+ +A EL+ P D Y ++ EG
Sbjct: 400 YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKL 459
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ +VV ++ +KG P+ + LI L + RK EA ME+ +G + V F +
Sbjct: 460 KESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTV 519
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ G A L PD +TY ++V ++ R KE LV +ML+ G
Sbjct: 520 IHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV 579
Query: 467 IPDLATYNSYM 477
+P TY + +
Sbjct: 580 LPTPVTYRTVI 590
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 9/284 (3%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ DR R R P+V F+ ++S + D A + R M +G F L+ +
Sbjct: 116 WADRQWRYRHAPEV--FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYS 173
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
K + + + M + GC C + V+ L GRV KA E R GV P +
Sbjct: 174 RAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVY 233
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ LCG A+E++ + + G P I+ T++ L + ++ E GL+++M
Sbjct: 234 TYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRM 293
Query: 392 LKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ G+ PD VT+N L+ L G +A + K D + Y +V + R
Sbjct: 294 RNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGR 353
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG------LSNARKSVR 488
E + +V EM+ +G PD+ TY++ +DG L ARK ++
Sbjct: 354 MAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMK 397
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 163/406 (40%), Gaps = 23/406 (5%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
+Q+T + L+H L H F S FR D + IV S + R +
Sbjct: 302 DQVTYNVLIHGLAKHGHADEALE------FLRESEGKRFRVDEVGYSAIVHSFCLNGRMA 355
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
E ++ + + C P++ + V+ F + ++ + M K D
Sbjct: 356 EAKEIVGEMISKGCQ---------PDVV-TYSTVVDGFCRIGELDQARKMMKHMYK-NDC 404
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ + L+NG K + +A ++ + P +T+++++ GF R K +
Sbjct: 405 KPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCD 464
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +M +KG P V N LI +RK E + + GC + V ++ G
Sbjct: 465 VVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFS 524
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G + A L+ D P Y +V+ L +G A +V+++ +G LP+ +
Sbjct: 525 RQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPV 584
Query: 367 ACTTLIEGLRRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T+I R KG + L+EKML + + +N ++E LC G+ +A L
Sbjct: 585 TYRTVIH--RYCEKGNLEDLLNLLEKMLARQEMKSA--YNQVVEKLCAFGKLNEAYSLLY 640
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
D T HIL+ + + N+ M IPD+
Sbjct: 641 KILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 183/383 (47%), Gaps = 9/383 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
++RH ++ ++ L + E S++ + + S +F+ ++ ++
Sbjct: 8 TYRHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ + D + F +K P + VL +K R F GFY
Sbjct: 68 VFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVL-EHLMKLRYFRLVWGFYKE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ P + FNIL+ FC+ + LA +F + + P+VVSFNTL+ G+
Sbjct: 127 ILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M G + T +L++GLC E ++ +A E++ + G++P +
Sbjct: 187 LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A+E+ ++ +G LP +I TLI GL R +A L+E+M+ +G
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ L++ C G LR + + D +TY L+SG RE R + E
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAE 366
Query: 456 NLVNEMLDEGFIPDLATYNSYMD 478
++ EML G PD TY M+
Sbjct: 367 KMLREMLTVGLKPDNGTYTMIMN 389
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 144/285 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N+L++ F K E A +D + + ++P VV+FN L++G+ R D L
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G P+V +++ LI G E K DE M EM++ G + VT L+DG C
Sbjct: 194 KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V A E+ +G LP Y L+ LC G+ G A ++V+E+ KG P I
Sbjct: 254 NGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKIT 313
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + L ++M++E I D VT+ L+ LC GR DA+++
Sbjct: 314 YTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREML 373
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
T GL PD TY ++++ + + K L+ EM G +P + T
Sbjct: 374 TVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 36/246 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N +++ +++G AM +P V Y+VLING K + D+A + M
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKSAMHA-TGVQPDVYTYSVLINGLCKESKMDEANEMLNEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + + P+ VTF LI G C+N K DLA+ ++++M +G P+++++NTLI G
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDL 292
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDG-------------------------------- 304
+ ++ EMI G + +T L+DG
Sbjct: 293 GQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTAL 352
Query: 305 ---LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
LC EGR A +++ + G+ P + Y ++ + C G+ A +++ E+ + G
Sbjct: 353 ISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGP 412
Query: 362 LPSVIA 367
+P V+
Sbjct: 413 VPGVVT 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C EG +A V D + K PSV++ TL+ G RL E L M G
Sbjct: 142 LMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATG 201
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + +A+ + GL P+G+T+ L+ G+ + +
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAM 261
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ +ML +GF+PDL TYN+ + GL R + Q R
Sbjct: 262 EIYKQMLSQGFLPDLITYNTLIYGLCR-RGDLGQAR 296
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKLCGE 343
E++E G S IL+ C EG ++ ++V D ++ + P + L+
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGE-MRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ + + G P V + LI GL + K EA+ ++ +ML G++P+ VTF
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ C G+ A + ++G PD +TY+ L+ G R + +LV EM+
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIM 304
Query: 464 EGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 305 KGLKPDKITYTTLIDG 320
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +LR G +++L+ G P FN L+ C G A +
Sbjct: 103 TCRKVLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAI 162
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L P ++++ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 163 TKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESK 221
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 11/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YNVL+ C + + R+ R+ KPDV ++N +I G CR + AL +
Sbjct: 162 PTAATYNVLLKAH--CSDAAAHIEDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDM 219
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM K P VV++ T+I E FD+ + + +EM G + VT L+DGLC
Sbjct: 220 FSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCK 279
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A EL+ + LP Y +++ LC E A+EV+D + +G P
Sbjct: 280 GGRATSALELLDRMVKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGL 339
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVDAD 420
LI GL + VEA+ +++M+ GI P+ VT+ N +L LCD G A
Sbjct: 340 FGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAF 399
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ T+ + D T+H+LV +++ N K +V +ML E IP+ T+++ + G
Sbjct: 400 QVYQSTRTRSISTDPTTFHLLVESFSKNNIEKAAR-VVLDMLSERCIPERETWDAIISGY 458
Query: 481 SNARKSVRQ 489
+ +K VRQ
Sbjct: 459 WS-KKKVRQ 466
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L+ M G P + T+N LL+ C D LRL + PD +Y+ ++
Sbjct: 148 ARSLLADMRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIP--KPDVCSYNTIID 205
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G R R E ++ +EM+ + P + TY + + L+
Sbjct: 206 GLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLA 243
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 5/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ K R+ L+ M + G P V Y +I+ +A F + M
Sbjct: 18 IQGLCKVKRLEQALIFLGKM--VSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANR 75
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+VVT+ +LI G C+ + D A+ L +MR+K C P V++N+LI G + E
Sbjct: 76 NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEA 134
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ EM+ GC T L+ G C + A + RG P Y L++
Sbjct: 135 YDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDG 194
Query: 340 LCGEGNAGIALEVVDELWKKGN-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC EG A+++ + K G+ +P+ + +LI G R+ K EA L+E+M + G P
Sbjct: 195 LCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSP 254
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT+ L+ C + R DA L + KGL PD +T+ L+ G RENR + +++
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
EM + P + TYN+ +DG A +
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQ 341
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 169/365 (46%), Gaps = 40/365 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++A NR+++ E M R L P+V Y VLI+G K D+A+
Sbjct: 49 YTAVIHALCVENRLHEARKFLEEMANRNLT---PNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M R + P VT+N LISG C+ ++ A L EM GC P++ ++ TLI GF +
Sbjct: 106 KM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK 164
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKDFDY 333
K D+ + + +++ G VT L+DGLC EGR+ +A +L + G +P Y
Sbjct: 165 KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C G A+ +++ + + G+ P V+ TTL+ G +L + +A L+ +M +
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD VTF L++ LC R DA + K P TY+ ++ GY R N+ +E
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Query: 454 GENLVNEMLD------------EGFI---------------------PDLATYNSYMDGL 480
+ E +D G PD+ Y + +DGL
Sbjct: 345 ARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 481 SNARK 485
+K
Sbjct: 405 CREKK 409
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI G K + ++AL F +MV PDV T+ +I C + A EM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ PNVV++ LI G + DE V + +M + C ++VT L+ GLC R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERAS 132
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L+ + G +P F Y L+ C + AL V ++L +G P V+ + LI
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 373 EGLRRLRKGVEASGLMEKMLKEG-ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+GL + + EA L +M+K G +P++VT+N L+ C +G+ +A L + G
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY L++G+ + R + +L+N+M +G PD+ T+ S MDGL
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 163/311 (52%), Gaps = 7/311 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ K R+ + + F M K P+ YN LI+GF + + D+A+ +RM
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PDVVT+ L++GFC+ + D A L +M KG P+VV+F +L+ G E +
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ V++ EM C + T ++DG C ++ +A + +++ P + +
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIM 365
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-G 395
+ LC + A+E+V+E ++ P V+ TT+I+GL R +K EA + KML+E G
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
LP+S+T++ L+ LC+ G DR R KG P+ TY++L+ + + NR ++
Sbjct: 426 CLPNSITYSTLITGLCNAGML---DRARGYIE-KGCVPNIGTYNLLIDAFRKANRDEDAR 481
Query: 456 NLVNEMLDEGF 466
L+++M+ GF
Sbjct: 482 ELLDDMVQRGF 492
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 42/365 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ KA R ++ A++ + +++ P + Y LI GF K ++ D AL ++
Sbjct: 118 YNSLISGLCKAERASE---AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 174
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGE 273
++V +PDVVT++ LI G C+ + A+ LF M + G C PN V++N+LI GF
Sbjct: 175 QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 234
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K DE +N+ M E G VT L++G C R+ A +L+ +R+G+ P +
Sbjct: 235 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTF 294
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM-EKML 392
L++ LC E A+ ++ E+ +K P+V T+++G R + EA M E+M
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM- 353
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
P+ V+FN ++ LC V R+ +A L A + +PD + Y ++ G RE +
Sbjct: 354 --DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVD 411
Query: 453 EGENLVNEMLDE--------------------------------GFIPDLATYNSYMDGL 480
E + +ML+E G +P++ TYN +D
Sbjct: 412 EACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAF 471
Query: 481 SNARK 485
A +
Sbjct: 472 RKANR 476
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 4/259 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D VT+ LI G C+ K+ + AL +M KG +P+V ++ +I E + E
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM + VT +L+DGLC GRV +A L+ R+ +P Y L+ LC
Sbjct: 69 LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCK 127
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A A ++++E+ G +P + TTLI G + +K +A + E+++ G PD VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 403 FNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++CL++ LC GR +A L R++ S + P+ +TY+ L+SG+ R + E NL+
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM-PNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 461 MLDEGFIPDLATYNSYMDG 479
M + G PD+ TY + M+G
Sbjct: 247 MAETGSSPDVVTYTTLMNG 265
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C VT L+ GLC R+ +A + +G P + Y ++ LC E A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ ++E+ + P+V+ T LI+GL + + EA L+ KM K+ + P +VT+N L+ L
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C R +A L G PD TY L++G+ + + + + +++ GF PD+
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 471 ATYNSYMDGL 480
TY+ +DGL
Sbjct: 186 VTYSCLIDGL 195
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC AL + ++ KG P V T +I L + EA +E+M
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P+ VT+ L++ LC GR +A L L K P +TY+ L+SG + R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVAL-LSKMRKKCVPTAVTYNSLISGLCKAERAS 132
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E +L+ EM+ G IPD+ TY + + G ++KS
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N + + R+++ + + M + G +P+ +N LI+G + +A+ DRMV
Sbjct: 772 LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+PD+VT+ ++++G C+ DLA L +M + P V+ +NT+I G + D+
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+N+ EM G + VT L+ LCN GR A L+ D R + P F + L++
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG A ++ DE+ K+ PS++ ++LI G + EA + E M+ + PD
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+N L++ C R + + S +GL + +TY+IL+ G + + +
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM+ +G P++ TYN+ +DGL
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGL 1090
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 165/323 (51%), Gaps = 3/323 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 872 IYNTIIDGLCKYKHMDDALNLFKEMETKGI--RPNVVTYSSLISCLCNYGRWSDASRLLS 929
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDV TF+ LI F + K A L+ EM ++ +P++V++++LI GF
Sbjct: 930 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 989
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M+ C VT L+ G C RV + E+ + S+RG++ Y
Sbjct: 990 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 1049
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A E+ E+ G P+++ TL++GL + K +A + E + +
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 455 ENLVNEMLDEGFIPDLATYNSYM 477
+ L EM ++G +P+ YN+ +
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLI 1192
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + F M K RP S+ +N L++ VK +++D + +M ++ D+
Sbjct: 168 KLNDAIDLFSDMVK---SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFNI+I+ FC + LAL + +M + G P+ V+ +L+ GF + + V++ +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+G + V ++D LC RV A + + R+G+ P Y LV LC
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ ++ KK P+VI + L++ + K +EA L E+M++ I PD VT++ L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC R +A+++ L +KG D ++Y+ L++G+ + R ++G L EM G
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464
Query: 467 IPDLATYNSYMDGLSNA 483
+ + TYN+ + G A
Sbjct: 465 VSNTVTYNTLIQGFFQA 481
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 169/330 (51%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K N+ + + E M+ L G P + Y++LIN F + + AL +
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNL--GIPHNHYTYSILINCFCRRSQLPLALAVLGK 755
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P++VT + L++G+C +K+ A+ L +M G PN V+FNTLI G F K
Sbjct: 756 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 815
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + M+ GC+ VT ++V+GLC G A L+ + + P Y
Sbjct: 816 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 875
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC + AL + E+ KG P+V+ ++LI L + +AS L+ M++
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD TF+ L++ G+ V+A++L + +DP +TY L++G+ +R E +
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + PD+ TYN+ + G ++
Sbjct: 996 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V ++ LI+ FVK + +A YD MV+ + P +VT++ LI+GFC + + D A +
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ +EG+ + EM + G ++VT IL+ GL
Sbjct: 998 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A E+ + GV P Y L++ LC G A+ V + L + P++
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ PD V +N ++ C G +AD L
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 1177
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ Y+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 1178 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 1234
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 154/292 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K +FD + ++M + + T++ILI+ FCR + LAL +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G PN+V+ ++L+ G+ ++ E V + +M G + ++VT L+ GL
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ +G P Y +V LC G+ +A +++++ + P V+
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L ++M +GI P+ VT++ L+ LC+ GR DA RL
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++PD T+ L+ + +E + E E L +EM+ P + TY+S ++G
Sbjct: 933 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 984
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN F + NR++D + + M + I +P + YN +I+ K + + A F+ + R
Sbjct: 265 VNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+VVT+ L++G C + ++ A L +M +K PNV++++ L+ F K E
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 383
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + + VT L++GLC R+ +A ++ +G L Y L+
Sbjct: 384 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 443
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +++ E+ ++G + + + TLI+G + +A +M GI PD
Sbjct: 444 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL LCD G A + + +D D +TY ++ G + + +E +L
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 563
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G PD+ TY + M GL
Sbjct: 564 LSLKGLKPDIVTYTTMMSGL 583
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 148/329 (44%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F +++ L M KL P L+NGF + A+ D+M
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD+V +N +I C+ K+ + A F+E+ KG PNVV++ L+ G ++
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +MI+ + +T L+D G+VL+A EL + R + P Y L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ D + KG L V++ TLI G + ++ + L +M + G+
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ ++VT+N L++ G A G+ PD TY+IL+ G ++
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M D+ TY + + G+ K
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGK 553
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ K R+ND F E RK I RP+V Y L+NG + A
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSDAARLLSD 353
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ P+V+T++ L+ F +N K A LF EM +P++V++++LI G +
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE M M+ GC V+ L++G C RV +L + S+RG++ Y
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G+ A E ++ G P + L+ GL + +A + E M K
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D VT+ ++ +C G+ +A L S KGL PD +TY ++SG + E E
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593
Query: 456 NLVNEMLDEGFIPDLAT 472
L +M EG + + T
Sbjct: 594 ALYTKMKQEGLMKNDCT 610
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 11/311 (3%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN ++R +D L + ++K I P+V Y+ L++ FVK + +A ++ MVR
Sbjct: 335 VNGLCNSSRWSDAARLLSDMIKKKI--TPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD+VT++ LI+G C + + D A +F M KGC +VVS+NTLI GF ++ ++G
Sbjct: 393 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 452
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM + G ++VT L+ G G V KA E G+ P + Y L+
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G AL + +++ K+ ++ TT+I G+ + K EA L + +G+ PD
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+ ++ LC G + + L +GL + T + L+
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIK 624
Query: 460 EMLDEGFIPDL 470
+ML G+ P L
Sbjct: 625 KMLSCGYAPSL 635
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 135/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+ + MV+ R P ++ F+ L+S + KFD+ + L +M+ G N +++
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F + + + +M++LG E + VT L++G C+ R+ +A LV
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + L+ L A A+ ++D + KG P ++ ++ GL + A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM + + P + +N +++ LC DA L TKG+ P+ +TY L+S
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++M++ PD+ T+++ +D K V +
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F + L +P V YN +I+GF + ++A + M
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ +N LI R+ + + L +EMR G
Sbjct: 1177 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 183/395 (46%), Gaps = 14/395 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F F WA +RH F ++ L+++ V+ + G+ E
Sbjct: 111 FEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRR-------GVRRGTE 163
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALG 211
F + ++ +A ++ + M+K DG P +SI N+ +N V DKAL
Sbjct: 164 Q---FAQLMLSYSRAGKLRSAMRVLHLMQK--DGCAPDISICNMAVNVLVVAGRVDKALE 218
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F +RM R V+PDV T+N LI G C ++ A+ + M + GC P+ +S+ T++
Sbjct: 219 FAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLC 278
Query: 272 GERKFDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E++ +E + M F VT +L+ GL G +A E + + + +
Sbjct: 279 KEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDE 338
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V C G A E+V E+ KG P V+ +T+++G R+ + +A +M+
Sbjct: 339 VGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKH 398
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K P++VT LL LC VG+T +A L + + P +TY +++ G+ RE +
Sbjct: 399 MYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGK 458
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE ++V +ML +GF P N + L RK
Sbjct: 459 LKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRK 493
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 169/371 (45%), Gaps = 12/371 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV-K 166
D T+ +++ L + R + ++ + N CP P+ +I ++ V +F+ K
Sbjct: 231 DVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCP---------PD--KISYYTVMSFLCK 279
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+ + + MR P YNVLI+G K D+AL F R + D V
Sbjct: 280 EKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEV 339
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
++ ++ FC N + A + EM KGC P+VV+++T++ GF + D+ M M
Sbjct: 340 GYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHM 399
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ C+ ++VT L++GLC G+ +A EL+ P D Y ++ EG
Sbjct: 400 YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKL 459
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ +VV ++ +KG P+ + LI L + RK EA ME+ +G + V F +
Sbjct: 460 KESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTV 519
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ G A L PD +TY ++V ++ R KE LV +ML+ G
Sbjct: 520 IHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV 579
Query: 467 IPDLATYNSYM 477
+P TY + +
Sbjct: 580 LPTPVTYRTVI 590
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 9/284 (3%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ DR R R P+V F+ ++S + D A + R M +G F L+ +
Sbjct: 116 WADRQWRYRHAPEV--FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYS 173
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
K + + + M + GC C + V+ L GRV KA E R GV P +
Sbjct: 174 RAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVY 233
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ LCG A+E++ + + G P I+ T++ L + ++ E GL+++M
Sbjct: 234 TYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRM 293
Query: 392 LKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ G+ PD VT+N L+ L G +A + K D + Y +V + R
Sbjct: 294 RNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGR 353
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG------LSNARKSVR 488
E + +V EM+ +G PD+ TY++ +DG L ARK ++
Sbjct: 354 MAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMK 397
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 163/406 (40%), Gaps = 23/406 (5%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
+Q+T + L+H L H F S FR D + IV S + R +
Sbjct: 302 DQVTYNVLIHGLAKHGHADEALE------FLRESEGKRFRVDEVGYSAIVHSFCLNGRMA 355
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
E ++ + + C P++ + V+ F + ++ + M K D
Sbjct: 356 EAKEIVGEMISKGCQ---------PDVV-TYSTVVDGFCRIGELDQARKMMKHMYK-NDC 404
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ + L+NG K + +A ++ + P +T+++++ GF R K +
Sbjct: 405 KPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCD 464
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +M +KG P V N LI +RK E + + GC + V ++ G
Sbjct: 465 VVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFS 524
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G + A L+ D P Y +V+ L +G A +V+++ +G LP+ +
Sbjct: 525 RQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPV 584
Query: 367 ACTTLIEGLRRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T+I R KG + L+EKML + + +N ++E LC G+ +A L
Sbjct: 585 TYRTVIH--RYCEKGNLEDLLNLLEKMLARQEMKSA--YNQVVEKLCAFGKLNEAYSLLY 640
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
D T HIL+ + + N+ M IPD+
Sbjct: 641 KILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 204/457 (44%), Gaps = 40/457 (8%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
QIT S + +K++ + +D ++ + FRHDH TF ++ L S +F
Sbjct: 12 QITNSLVEQLIKAEKDINKTLVMFDSATEEYS---NGFRHDHNTFGAMIHRLVSVNQFRP 68
Query: 128 LHSVLNFISANPCPCSNDGIFSCP----------EMERIFH----FAV-----------N 162
+L + C + D + + R+FH F V +
Sbjct: 69 AEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFD 128
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCRE-FDKALGFYDRMVRDR 220
V+ N + + ++ MR+ G P +V N+LI K E + A + M
Sbjct: 129 ILVEENHVKRAIGFYKEMRE--KGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRG 186
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD T+ LI+G C+ K A L EM EKG +P+VVS+ +LI G DE +
Sbjct: 187 CQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAI 246
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EMI G E + T L+DGLC G +A EL+ RR +LP Y L+ L
Sbjct: 247 ELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGL 306
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG A+E++D + +G P +I GL EA+ +++M GI P+
Sbjct: 307 CKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNR 366
Query: 401 VTF-------NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
++ N +++ LC+ A +L L T+G+ + T+ LV + + +
Sbjct: 367 ASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNK 426
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
++ EM+ +G IPD +N M GL + RK VR+T
Sbjct: 427 AARILEEMILDGCIPDEGMWNVLMCGLWD-RKKVRET 462
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ ++N +++ + E M +I+G P+V Y+ L++G K +A+ + MVR
Sbjct: 233 IHGLCQSNNLDEAIELLEEM--IINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRR 290
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
R+ P++VT++ LI+G C+ K A+ + MR +G P+ + +I G + E
Sbjct: 291 RLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEA 350
Query: 280 VNMAYEMIELGCE-------FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
N EM G F ++V GLCN +A +L + RG+ +
Sbjct: 351 ANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGT 410
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ LV+ C G+ A +++E+ G +P L+ GL +K E + L+ L
Sbjct: 411 FDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAEL 470
Query: 393 KE 394
K+
Sbjct: 471 KQ 472
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 200/428 (46%), Gaps = 44/428 (10%)
Query: 96 FAWAS--TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC--- 150
F W S T +FRH ++ ++ L + E +++ + + S +F+
Sbjct: 2 FTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILE 61
Query: 151 ---PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID-------- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 62 TQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYF 121
Query: 186 -------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
G P S+ +N+L++ F K + AL +D + + ++P VV+FN L
Sbjct: 122 KLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTL 181
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
++G+ R D L M G P+V +++ LI G E K D+ + EM++ G
Sbjct: 182 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGL 241
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT L+DG C GRV A E+ + + P Y L+ LC +G+ A +
Sbjct: 242 VPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 301
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++DE+ KG P I+ TTLI+G + A ++M++E I D V + L+ LC
Sbjct: 302 LIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC 361
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
GR++DA+++ + GL PD TY ++++ + ++ G L+ EM +G +P +
Sbjct: 362 QEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 421
Query: 472 TYNSYMDG 479
TYN M+G
Sbjct: 422 TYNVLMNG 429
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + + P +F L+ + C EG+ +AL V D + K G PSV++
Sbjct: 118 LKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVS 177
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G RL E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 178 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 238 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGL 290
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 143/292 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P ++NVL+ V+ E A +D M V+ VV+FN +ISG CR D A L
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M E G P+V ++ LI+G + ++ + +M G + ++V IL+D C
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 357
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G EL + RGV P Y +V LC + A +V E+ G P +
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + + A + + M+ EG+ D VT+ L+ L GR+ DA+R+
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL+PD TY +++ + R+ K G L+ EM ++G P + TYN M+G
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 529
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 1/329 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P ++F+ + V+ + F+ M+ R VS +N +I+G + + D A
Sbjct: 237 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS-FNTMISGMCRAGDLDGAE 295
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ RM V PDV T+ LI G CR + + A G+F +M +G PN V F LI
Sbjct: 296 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAH 355
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + + + EM E G +VT +V+GLC + A +V++ G+ P
Sbjct: 356 CKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 415
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ C E +A+E+ + +G + T LI GL + + +A ++ +
Sbjct: 416 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 475
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M++ G+ PD+ T+ +++ C G RL KG P +TY+++++G+ + +
Sbjct: 476 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 535
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K + L+N M++ G PD TYN +DG
Sbjct: 536 MKNADMLLNAMINIGVSPDDITYNILLDG 564
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y LI G + + A G +++M +KP+ V F ILI C+ + L L
Sbjct: 308 PDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLEL 367
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
REMRE+G P+ V++N ++ G R + EM G +VT L+DG C
Sbjct: 368 HREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 427
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + A E+ + GV + Y L+ L G + A V+ E+ + G P
Sbjct: 428 EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTT 487
Query: 368 CTTLIEGLRRLRKGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
T +I+ RKG +GL +++M +G P VT+N ++ C +G+ +AD L
Sbjct: 488 YTMVIDAF--CRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNA 545
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G+ PD +TY+IL+ G+ + + + E L + +G +PDL Y S
Sbjct: 546 MINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTS 592
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + R+ D FE M R + +P+ ++ +LI+ K + + L + M
Sbjct: 317 IQGLCRVGRIEDARGVFEKMCGRGM---KPNAVVFTILIDAHCKKGDAETMLELHREMRE 373
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V+PD VT+N +++G CR + A G+ EMR G P+ V++ TLI G+ E + D
Sbjct: 374 RGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDM 433
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + M+ G VT L+ GL GR A ++ + G+ P + Y +++
Sbjct: 434 AMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID 493
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G+ L ++ E+ KG P V+ ++ G +L + A L+ M+ G+ P
Sbjct: 494 AFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 553
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
D +T+N LL+ C G+ D + L+ S KG PD Y +V ++ K
Sbjct: 554 DDITYNILLDGHCKHGKVTDIEELK---SAKGTVPDLGVYTSIVGEIVKKKTTK 604
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A FY +++ + P+ FN+L+ R + A +F EM+ +G VVSFNT+I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G D + M E G T L+ GLC GR+ A + RG+
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + L++ C +G+A LE+ E+ ++G P + ++ GL R R ASG+
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M G+ PD+VT+ L++ C A ++ +G+ D +TY L+SG ++
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R + E ++ EM++ G PD TY +D
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDA 494
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 307 NEGRVLKACELVIDFSRRGV-------------------------------LPKDFDYFG 335
EG + AC LV+ RRG+ LP + F
Sbjct: 185 EEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFN 244
Query: 336 -LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L G A V DE+ +G +V++ T+I G+ R A L +M +
Sbjct: 245 VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEA 304
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD T+ L++ LC VGR DA + +G+ P+ + + IL+ + ++ +
Sbjct: 305 GVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 364
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM + G PD TYN+ ++GL AR
Sbjct: 365 LELHREMRERGVRPDAVTYNAIVNGLCRAR 394
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 174/332 (52%), Gaps = 9/332 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID-GRPSVS----IYNVLINGFVKCREFDKALGFYDR 215
+N +K N G+ FEAM + + GR SVS YN LING K ++ +A+G
Sbjct: 1 MNIVLKGLCRNGGV--FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 58
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M P+ VT L+ G C++ + D A+ L M++KG + +VV + TLI GF
Sbjct: 59 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D G + EM+ G + VT LV GLC G+ +A ++ + G+ P Y G
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC +G A A+++++ + +KG PS + L+ GL + ++A ++ M+++G
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
D VT+N L++ LCD G+ +A +L + + L+P+ T+++L+ G +E R +
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M+ +G +L TYN + G A K
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 8/318 (2%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNIL 231
AF+ +R +I+ + V YN L+ G + D+AL ++ M + ++P+V TFN+L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G C+ + A+ + R+M +KG N+V++N L+ G K E + + ++++LG
Sbjct: 287 IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 346
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+S T IL+DG C + A L + G+ P FDY L+ LC EG+ A
Sbjct: 347 VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKS 406
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ E+ P +I+ T+I+G + L KM++ G+ PD++TF+ L+ L
Sbjct: 407 LFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLS 466
Query: 412 DVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+G +A R++AS G PD + Y L+ G + + E NL+++M +G + D
Sbjct: 467 KLGELDEAKSALERMVAS--GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 524
Query: 470 LATYNSYMDGLSNARKSV 487
++ + L ++ + V
Sbjct: 525 RKIVSTILTCLCHSIQEV 542
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 40/357 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K RM++ + EAM+K G V +Y LI+GF D+ +D M+
Sbjct: 75 MDGLCKDGRMDEAMELLEAMKK--KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK 132
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ +VVT++ L+ G CR ++ A + M E G +P+VV++ LI G + +
Sbjct: 133 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHA 192
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-------------- 325
+++ M+E G E S+VT +L+ GLC EG V+ A +++ +G
Sbjct: 193 MDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 252
Query: 326 -----------------------VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+ P F + L+ LC EG A+++ ++ KKG+
Sbjct: 253 LCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSC 312
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+++ L+ G + K EA L +++L G +P+S T++ L++ C + A L
Sbjct: 313 GNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 372
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
T GL+P Y+ L++ +E ++ ++L EM + PD+ ++N+ +DG
Sbjct: 373 FCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 2/298 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
PS YNVL++G K A M+ K DVVT+N L+ G C K D AL
Sbjct: 205 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 264
Query: 247 LFREM--REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
LF M E PNV +FN LI G E + + V + +M++ G + VT +L+ G
Sbjct: 265 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 324
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G++ +A EL G +P F Y L++ C IA + E+ G P+
Sbjct: 325 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 384
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ TL+ L + +A L ++M PD ++FN +++ G L++
Sbjct: 385 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 444
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
GL PD +T+ L++ ++ E ++ + M+ GF PD Y+S + GLS+
Sbjct: 445 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 502
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 13/319 (4%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D T+ +++ L + E + N + N C +F+ F+ +
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE-NCLEPNVFT-------FNMLIGGLC 291
Query: 166 KANRMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
K R+ A + RK++ ++ YN+L+ G +K + +A+ + +++ P
Sbjct: 292 KEGRLTK---AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 348
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+ T++ILI GFC+ + ++A GLF EMR G NP + +NTL+ E ++ ++
Sbjct: 349 NSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLF 408
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
EM CE ++ ++DG G EL + G+ P + L+ +L
Sbjct: 409 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKL 468
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A ++ + G P + +L++GL E L+ +M +G + D
Sbjct: 469 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 528
Query: 404 NCLLEDLCDVGRTVDADRL 422
+ +L LC + VD L
Sbjct: 529 STILTCLCHSIQEVDVMEL 547
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P + +N +I+G +K +F +MV ++PD +TF+ LI+ + + D A
Sbjct: 417 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 476
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
M G P+ + +++L++G + E +N+ ++M G ++ LC
Sbjct: 477 ALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536
Query: 307 NEGRVLKACELVIDF 321
+ + + EL+ F
Sbjct: 537 HSIQEVDVMELLPTF 551
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N +I FV+ D A+ Y +M R+ ++ +FNILI FC K +L F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGCNPNVVSFNTLIRGF------------FG---ERKFDEGVNMAYEMIELGCEFSSVTC 298
G P+VV+FNTL+ G FG E F E V + +M+E+G +T
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L++GLC EGRVL+A LV +G+ Y +V +C G+ AL ++ ++ +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
P V+ + +I+ L + +A L +ML++GI P+ T+NC+++ C GR D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A RL + ++PD +T++ L+S +E + E E L +EML PD TYNS +
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 479 GL 480
G
Sbjct: 410 GF 411
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++ K +D F E + K I P+V YN +I+GF + A
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDV+TFN LIS + K A L EM + P+ V++N++I GF
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+FD+ A M +L VT ++D C RV + +L+ + SRRG++ Y
Sbjct: 416 RFDD----AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C N A ++ E+ G P I C L+ G K EA L E +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D+V +N ++ +C + +A L G++PD TY++++SG+ ++ +
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L ++M D G PD +TYN+ + G A
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 26/342 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE----------- 205
F+ + F ++++ L F + KL +P V +N L++G C E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGL--CLEDRISEALALFG 200
Query: 206 ------FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
F +A+ +D+MV + P V+TFN LI+G C + A L +M KG + +
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VV++ T++ G +N+ +M E + V ++D LC +G A L
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ +G+ P F Y +++ C G A ++ ++ ++ P V+ LI +
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTY 438
K EA L ++ML I PD+VT+N ++ C R DA + L+AS PD +T+
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTF 435
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ Y R R EG L+ E+ G + + TYN+ + G
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 161/409 (39%), Gaps = 86/409 (21%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMV 217
+ FV+ NR + +A RK+ R ++IY N+LI F C + +L + ++
Sbjct: 112 VIGVFVRMNRPD---VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLF---------------REMREKGCNPNVVS 262
+ +PDVVTFN L+ G C + AL LF +M E G P V++
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FNTLI G E + E + +M+ G VT +V+G+C G A L+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL------- 375
+ P Y ++++LC +G+ A + E+ +KG P+V +I+G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 376 ---RRLR-------------------------KGVEASGLMEKMLKEGILPDSVT----- 402
R LR K EA L ++ML I PD+VT
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 403 --------------------------FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
FN +++ C R + +L S +GL +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ L+ G+ + ++L EM+ G PD T N + G K
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F K NR +D F+ M P V +N +I+ + + + D+ + +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R + + T+N LI GFC + A LF+EM G P+ ++ N L+ GF K
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 277 DEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + + +E+I++ + +V I++ G+C +V +A +L GV P Y
Sbjct: 519 EEALEL-FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ CG+ A + ++ G+ P TLI G + + ++ L+ +M G
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 396 ILPDSVTFNCLLEDLCDV 413
D+ T E +C V
Sbjct: 638 FSGDAFTIKMAEEIICRV 655
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ F+D MVR R V N +I F R + D+A+ L+R+M + N+ SF
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N +I+ C+ C L L G++ K
Sbjct: 145 NI--------------------LIKCFCD-----CHKLSFSLSTFGKLTKL--------- 170
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G P + L+ LC E AL + + + G L E
Sbjct: 171 -GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------E 209
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L ++M++ G+ P +TFN L+ LC GR ++A L KGL D +TY +V+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + K NL+++M + PD+ Y++ +D L
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 151/299 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +L+ K + +A+ D M PD+VT+N++++G C+ + + A+
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF 258
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + GC PN VS+N +++G F ++++ + EM GC + VT +L+ LC
Sbjct: 259 LKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCR 318
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A E++ + G P Y L+ C + A+E V+ + +G P +++
Sbjct: 319 RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ L R + A L+ ++ +G P +++N +++ L G+T +A L +
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+KGL PD +TY + SG RE+R +E ++ D G P A YN+ + GL R++
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRET 497
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 153/311 (49%), Gaps = 3/311 (0%)
Query: 173 GLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
G +A R+L+ P YN LI G AL + M R PDVVT+
Sbjct: 146 GAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYT 205
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
IL+ C+ + A+ L EM +KGC P++V++N ++ G E + ++ + +
Sbjct: 206 ILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSY 265
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GCE ++V+ I++ GL R A +L+ + + +G P + L+ LC G A
Sbjct: 266 GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPA 325
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+EV++++ + G P+ ++ L+ + +K +A +E M+ G PD V++N LL
Sbjct: 326 MEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G A L KG P ++Y+ ++ G T+ + KE L++EM +G PD
Sbjct: 386 LCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPD 445
Query: 470 LATYNSYMDGL 480
+ TY++ GL
Sbjct: 446 IITYSTIASGL 456
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 149/295 (50%), Gaps = 2/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YNV++NG + + A+ F + +P+ V++NI++ G ++++ A L
Sbjct: 234 PDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKL 293
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDE-GVNMAYEMIELGCEFSSVTCEILVDGLC 306
EM KGC PNVV+FN LI F R E + + +M + GC +S++ L+ C
Sbjct: 294 MEEMAHKGCPPNVVTFNMLI-SFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFC 352
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ ++ KA E V RG P Y L+ LC G +A+E++ +L KG P +I
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLI 412
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ T+I+GL + K EA L+++M +G+ PD +T++ + LC R +A R
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G+ P Y+ ++ G + +L M+ G +P+ +TY ++GL+
Sbjct: 473 QDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 143/313 (45%), Gaps = 5/313 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + R+ D A E ++ L P+ YN+++ G ++ A +
Sbjct: 239 YNVVLNGICQEGRVED---AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLME 295
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M P+VVTFN+LIS CR + A+ + +M + GC PN +S+N L+ F ++
Sbjct: 296 EMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQK 355
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 356 KIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYN 415
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ L G ALE++DE+ KG P +I +T+ GL R + EA K+
Sbjct: 416 TVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI P + +N +L LC T +A L + G P+ TY ILV G E KE
Sbjct: 476 GIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535
Query: 455 ENLVNEMLDEGFI 467
L ++ G +
Sbjct: 536 RELFAQLCSRGVV 548
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV+ +N +++G+C + D A L +M P+ ++NTLIRG G + + +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+M GC VT IL++ C +A +L+ + +G P Y ++ +C
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
EG A+E + L G P+ ++ +++GL + +A LME+M +G P+ VT
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
FN L+ LC G A + G P+ ++Y+ L+ + ++ + + V M+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368
Query: 463 DEGFIPDLATYNSYMDGL 480
G PD+ +YN+ + L
Sbjct: 369 SRGCYPDIVSYNTLLTAL 386
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 110/229 (48%), Gaps = 3/229 (1%)
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
P+V+ +N ++ G+ G + D + +M E + T L+ GLC GR A
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALA 187
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
++ D RRG LP Y L+E C A++++DE+ KG P ++ ++ G+
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + +A ++ + G P++V++N +L+ L R DA++L + KG P+ +
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
T+++L+S R + ++ +M G P+ +YN + +K
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E + +L D P + YN +I+G K + +AL D M ++PD++T++ +
Sbjct: 394 VAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SG CR + + A+ F ++++ G P +N ++ G R+ +++ MI GC
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCM 513
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ T ILV+GL EG V +A EL RGV+ K G ++ L G
Sbjct: 514 PNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMKKGSIKMLDG 563
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ LC GRT DA R+LA++ PD M Y+ +V+GY + LV +M E
Sbjct: 110 LIKKLCASGRTADAR--RVLAAS---GPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE- 163
Query: 466 FIPDLATYNSYMDGL 480
PD TYN+ + GL
Sbjct: 164 --PDAYTYNTLIRGL 176
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 166/330 (50%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K + + + +E M+ L G P ++ N+L+N F +C + AL F +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQML--GIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +PD+VTF L++GFCR + AL +F M E G PNVV +NT+I G ++
Sbjct: 142 MMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +++ M G +VT L+ GLCN GR A +V ++R + P F +
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ EG A E+ +E+ ++ P ++ + LI GL + EA + M+ +G
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT++ L+ C + +L S +G+ + +TY +L+ GY R + E
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAE 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ G P++ TYN + GL + K
Sbjct: 382 EIFKWMVFCGVPPNIITYNVLLHGLCDNGK 411
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 36/348 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N F + +R+ D L F+ M ++ P+V IYN +I+G K ++ D AL +RM
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEM-GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLAL------------------------------- 245
D ++PD VT+N LISG C + ++D A
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272
Query: 246 ----GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
L+ EM + +P++V+++ LI G + DE M M+ GC VT IL
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++G C +V +L + S+RGV+ Y L++ C G +A E+ + G
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P++I L+ GL K +A ++ M K G+ D VT+N ++ +C G DA
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
L + KGL PD TY ++ G ++ R E + L +M ++G +P+
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 154/299 (51%), Gaps = 2/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ ++ L++ K +++D + +++M + ++ T NIL++ FCR + LAL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 248 FREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+M + G P++V+F +L+ GF G+R +D + M M+E+G E + V ++DGLC
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYD-ALYMFDRMVEMGYEPNVVIYNTIIDGLC 197
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+V A +L+ G+ P Y L+ LC G A +V + K+ P V
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+ + + EA L E+M++ + PD VT++ L+ LC R +A+++
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFM 317
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG PD +TY IL++GY + + + G L EM G + + TY + G A K
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 142/295 (48%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S Y ++ ++ + D +L + MV+ R P + F+ L+S + KK+D+ + L+ +
Sbjct: 47 SDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+ G N+ + N L+ F + ++ +M++LG E VT L++G C R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A + G P Y +++ LC AL++++ + G P + +
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + +A+ ++ M K I PD TFN L++ GR +A+ L +
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
LDPD +TY +L+ G +R E E + M+ +G PD+ TY+ ++G ++K
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 351 EVVDELWKKGNLPSV----IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+VV LW++ + + C L+ R + A + KM+K G PD VTF L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C R DA + G +P+ + Y+ ++ G + + +L+N M +G
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
PD TYNS + GL N+ + TR
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATR 242
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 176/391 (45%), Gaps = 12/391 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F F W + SFR T ++ LA F +L + N I P
Sbjct: 81 FRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGFDTYWKILEELK-------NSNIQIPPP 132
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
F + A+ K+ + +F M+ +P V YN +++ V+ F AL
Sbjct: 133 ---TFSVLIAAYAKSGMAEKAVESFGKMKDF-GCKPDVFTYNSILHVMVQKEVFLLALAV 188
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y++M++ P+ TF IL++G C+N K D AL +F EM +KG PN + + ++ G
Sbjct: 189 YNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQ 248
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
++ D+ + M GC S+TC L+DG C G++ +A L+ F + G +
Sbjct: 249 AKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKG 308
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L E +++K G P V+ T LI G + A ++ M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ G+ PD+ +N L++ CDVG A L+L S P TY IL+ G R
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E + N+M + G P + T+N+ +DGL A
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKA 459
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 18/333 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N K + +D L F+ M +K I P+ IY ++++G + + D +
Sbjct: 204 FVILLNGLCKNGKTDDALKMFDEMTQKGIP--PNTMIYTIILSGLCQAKRTDDVHRLLNT 261
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M PD +T N L+ GFC+ + D A L + ++G + +++LI G F ++
Sbjct: 262 MKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+DE +M + G E V IL+ G C G V A ++ D ++RG+ P + Y
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G A + E+ K P+ T LI G+ R EA + +M G
Sbjct: 382 LIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL-----------RLLASTKGLDPDGMTYHILVSG 444
P +TFN L++ LC G +A L L ++G D T +G
Sbjct: 442 CSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDT----ANG 497
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ R +R ++ ++++M+ G P A Y M
Sbjct: 498 FHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLM 530
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 170/390 (43%), Gaps = 35/390 (8%)
Query: 112 FLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
+ I+ L + R ++H +LN + + C CP+ + ++ F K +++
Sbjct: 239 YTIILSGLCQAKRTDDVHRLLNTMKVSGC---------CPD-SITCNALLDGFCKLGQID 288
Query: 172 DGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ + K +G + Y+ LI+G + + +D+ + +M + ++PDVV + I
Sbjct: 289 EAFALLQLFEK--EGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI GFC D AL + +M ++G +P+ +N LI+GF D+ ++ E+ +
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C +S T IL+ G+C G + +A ++ G P + L++ LC G L
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE----L 462
Query: 351 EVVDELWKK---GNLPSVIA--------CTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
E L+ K G PS+ G R+ + +A ++++M+K G P
Sbjct: 463 EEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPS 522
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
S + CL+ C G+ A L L + T + + + E E V
Sbjct: 523 SAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHF----EKGELEKAVR 578
Query: 460 EMLDEGFIP---DLATYNSYMDGLSNARKS 486
+L+ F ++A Y ++ GL AR+S
Sbjct: 579 CLLEMNFKLNNFEIAPYTIWLIGLCQARRS 608
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%)
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V+ N +I + FD + E+ + T +L+ G KA E
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
G P F Y ++ + + +AL V +++ K P+ L+ GL + K
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A + ++M ++GI P+++ + +L LC RT D RL G PD +T +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ G+ + + E L+ EG++ + Y+S +DGL A++
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 152/299 (50%), Gaps = 2/299 (0%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
RP+ Y ++ G R +A+ M V+ DVVT+ LI G C + D AL
Sbjct: 119 ARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAAL 178
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L EM G PNVV ++ L+RG+ ++ + + +M G + + L+D L
Sbjct: 179 ELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDL 238
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C EG+ KA ++ +RG+ P Y L+ LC EG+ AL + E+ KG P V
Sbjct: 239 CKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDV 298
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGIL--PDSVTFNCLLEDLCDVGRTVDADRLR 423
+ TLI GL + + EA +E+M++ + PD VTFN ++ LC +GR A ++R
Sbjct: 299 VTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVR 358
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ + +G + +TY+ L+ G+ R ++ K NL++E+ G PD TY+ ++G S
Sbjct: 359 EMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 10/310 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++ +N+ K + + L +RK +D + P V YN LI G E D+A+ F
Sbjct: 266 YNVLINSLCKEGSVREAL----TLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321
Query: 214 DRMVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M++ V+PDVVTFN +I G C+ + A+ + M E+GC N+V++N LI GF
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
K +N+ E+ G E S T IL++G V +A + + +RG+ + F
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ +C +G A+ + +E+ K L + IA +T+I G + L++ M
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDA-IAYSTMIHGACKSGDMKTVKQLIQDM 500
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L EG+ PD+VT++ L+ +G +A+R+ + G PD + L+ GY+ E +
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQT 560
Query: 452 KEGENLVNEM 461
+ L++EM
Sbjct: 561 DKVLKLIHEM 570
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ ++ TT++ GL R+ EA L+ M G+ D VT+ L+ LCD A L
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G+ P+ + Y L+ GY R R ++ + +M G PD+ + +D L
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240
Query: 483 ARKSVRQTR 491
K+ + +
Sbjct: 241 EGKTGKAAK 249
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y++LIN + K + ++A +M PDV F+ LI G+ + D L L
Sbjct: 507 PDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKL 566
Query: 248 FREMREKGC--NPNVVSFNTLIR 268
EMR K +P ++S T+IR
Sbjct: 567 IHEMRAKNVAFDPKIIS--TIIR 587
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 2/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + +A R+ + + + MR P V YN LI G K +A+ + RM
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGMRAY--AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD T+N +I G+C+ A L ++ KG P+ V++ +LI G E
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + E G + V LV GLC +G +L A +++ + + G P Y +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC GN A V+++ KG LP V TLI+G + K A L+E+M + GI
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD++T+N +L LC G+ + + KG P+ +TY+IL+ + R N+ +E
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
++ +M EG PD ++N+ + G
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYG 547
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ +N +++ K + +A ++++ + ++ T+NI I G C + A+ L
Sbjct: 187 PNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL 246
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
MR P+VV++NTLIRG + E ++ M+ GC T ++DG C
Sbjct: 247 VDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 305
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V +A EL+ D +G +P Y L+ LC EG+ ALE+ +E KG P ++
Sbjct: 306 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 365
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++GL + A +M +M +EG PD T+N ++ LC +G DA + A
Sbjct: 366 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 425
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG PD T++ L+ GY + + LV M + G PD TYNS ++GL A K
Sbjct: 426 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGK 483
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 11/333 (3%)
Query: 159 FAVNAFVKANRMNDGLL-------AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKA 209
+AV V N + GL A +R++++ P YN +I+G+ K +A
Sbjct: 253 YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEA 312
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
V PD VT+ LI+G C + AL LF E + KG P++V +N+L++G
Sbjct: 313 TELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 372
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + EM E GC T I+++GLC G + A ++ D +G LP
Sbjct: 373 LCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPD 432
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + L++ C AL++V+ +W+ G P I +++ GL + K E + +
Sbjct: 433 VFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQ 492
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M+ +G P+ +T+N L+E+ C + +A ++ + S +GL PD ++++ L+ G+ R N
Sbjct: 493 EMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR-N 551
Query: 450 RRKEGENLVNEMLDE-GFIPDLATYNSYMDGLS 481
EG L+ + L+E G+ T+N+ + S
Sbjct: 552 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+ I G + +A+ D M R PDVVT+N LI G C+ A+ R M
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMM 285
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P+ ++NT+I G+ E + + + G VT L++GLC EG V
Sbjct: 286 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 345
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL + +G+ P Y LV+ LC +G AL+V++E+ ++G P + +I
Sbjct: 346 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL ++ +A+ +M + +G LPD TFN L++ C + A +L G+
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 465
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY+ +++G + + E EM+ +G P+ TYN ++ + K
Sbjct: 466 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 518
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 156/352 (44%), Gaps = 33/352 (9%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ A+ +A R+ D + AFE M L P+ YN +++ V D+A Y RM+
Sbjct: 59 SIRAYARAGRLRDAVDAFERM-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAA 117
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG----CN------------------ 257
V PD+ T I + FC + +AL L R + +G C
Sbjct: 118 GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLF 177
Query: 258 ---------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
PN+ +FN ++ E + ++I+ G + T I + GLC
Sbjct: 178 DQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA 237
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ +A LV D R +P Y L+ LC + A+ + + +G LP
Sbjct: 238 GRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 296
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T+I+G ++ EA+ L++ + +G +PD VT+ L+ LC G A L A
Sbjct: 297 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 356
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG+ PD + Y+ LV G + ++NEM +EG PD+ TYN ++GL
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 131/292 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LING + ++AL ++ +KPD+V +N L+ G C AL +
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 385
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E+GC+P++ ++N +I G + + + I G T L+DG C
Sbjct: 386 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ A +LV G+ P Y ++ LC G E E+ KG P+ I
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIE R K EAS ++ KM +EG+ PD+V+FN L+ C G A L
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 565
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG T++ L+ ++ + E + +EML +G D TY +DG
Sbjct: 566 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 10/315 (3%)
Query: 174 LLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
L A + M ++ + P + YN++ING K A + + PDV TFN L
Sbjct: 380 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTL 439
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G+C+ K D AL L M E G P+ +++N+++ G K +E EMI GC
Sbjct: 440 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 499
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ +T IL++ C ++ +A ++++ S+ G+ P + L+ C G+ A
Sbjct: 500 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 559
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ +L +KG + TLI A + ++ML +G DS T+ L++ C
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619
Query: 412 DVGRTVDADRLRLLASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
VD + L+ K G P T+ +++ T +R + +++ M+ G +P++
Sbjct: 620 KTA-NVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678
Query: 471 ATYNSYMDGLSNARK 485
+D + NA K
Sbjct: 679 ------VDTILNADK 687
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ +N K ++D + ++ G P V +N LI+G+ K + D AL
Sbjct: 399 QTYNIVINGLCKMGNISDATVVMN--DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 456
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM + PD +T+N +++G C+ K + F+EM KGC+PN +++N LI F
Sbjct: 457 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 516
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K +E + +M + G +V+ L+ G C G + A L +G +
Sbjct: 517 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 576
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ G+ N +A ++ DE+ KG+ LI+G + A + +M+K
Sbjct: 577 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 636
Query: 394 EGILPDSVTFNCLLEDL 410
+G +P TF ++ L
Sbjct: 637 KGFIPSMSTFGRVINSL 653
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N KA ++N+ F+ M ++ G P+ YN+LI F + + ++A +
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEM--ILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 528
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++ + PD V+FN LI GFCRN + A LF+++ EKG + +FNTLI F G+
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ EM+ G S T +L+DG C V +A +++ ++G +P +
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 648
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++ L A+ ++ + K G +P V+
Sbjct: 649 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ L E M + P YN ++NG K + ++ + M
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEY-GIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ +T+NILI FCR+ K + A + +M ++G +P+ VSFNTLI GF
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + ++ E G ++ T L+ + + A ++ + +G + Y L
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVL 614
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C N A + E+ KKG +PS+ +I L + +A G++ M+K G+
Sbjct: 615 IDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 674
Query: 397 LPDSV 401
+P+ V
Sbjct: 675 VPEVV 679
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 12/223 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F ++N+M + M + +G P +N LI GF + + + A + +
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQ--EGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ TFN LI F +A +F EM KG + ++ LI G
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D EMI+ G S T +++ L RV +A ++ + GV+P+
Sbjct: 624 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE------ 677
Query: 336 LVEKLCGEGNAGIALE--VVDELWKKGNLPSVIACTTLIEGLR 376
+V+ + IA +V++L KKG++ S L EG+R
Sbjct: 678 VVDTILNADKKEIAAPKILVEDLMKKGHI-SYPTYEVLHEGVR 719
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 3/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N +M+ ++ ++ M L+ G +P+V YNV+IN K + ++ALGF +
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDM--LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQ 192
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VV ++ LI G+C + D A +F M KGC PNV ++ +L+ G+ +
Sbjct: 193 MEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIER 252
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E V + E + G VT ++ GLC GR L A +L G P Y
Sbjct: 253 IEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGV 312
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC GN A + E+ + P+++ T LI+ L + K + L +++ EG
Sbjct: 313 LLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ T+ L+ LC G ++A +L G PD Y++++ G+ +
Sbjct: 373 LKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMAR 432
Query: 456 NLVNEMLDEGFIPDLAT 472
LV EM++ GF D AT
Sbjct: 433 QLVEEMVNRGFSADAAT 449
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 168/335 (50%), Gaps = 7/335 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F +R++ GL + KL PS+ + L+NG + D+ + YD M+
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKL-GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+V T+N++I+ ++ K + ALG ++M + GC PNVV+++TLI G+ + DE
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M+ GC + T L++G C R+ +A +L+ + R+G++P + ++ L
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A ++ + G+ P+++ L++GL + EA L ++M + + P+
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V + L++ LC G+ D L +GL P+ TY LV +E E L +
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402
Query: 461 MLDEGFIPDLATYNSYMDGL------SNARKSVRQ 489
M ++G PD YN + G S AR+ V +
Sbjct: 403 MEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 142/287 (49%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++LIN F D L ++++ ++P +VTF L++G C K D + L+ +M
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G PNV ++N +I K +E + +M ++GC + V L+DG C G++ +
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A + +G P + Y L+ C A++++DE +KG +P ++ TT+I
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL R + + A L + G P+ +T+ LL+ LC G +A L + P
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + Y IL+ + + K+G+ L + ++DEG P++ TY + + L
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 151/315 (47%), Gaps = 1/315 (0%)
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+D L +F M L P + ++ L + V+ ++ + + ++ D+ + +I
Sbjct: 44 DDALASFRLML-LRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSI 102
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+ FC + D L + ++ + G P++V+F TL+ G E K D+ + + +M+ G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ + T ++++ L G+ +A + + G +P +Y L++ C G A
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
V D + KG P+V T+L+ G ++ + EA L+++ L++G++PD VTF ++ L
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C GR + A +L G P+ MTY +L+ G + +E L EM P+L
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342
Query: 471 ATYNSYMDGLSNARK 485
Y +D L K
Sbjct: 343 VIYTILIDSLCKCGK 357
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
++ D AL + M+ + P +V F+ L S R ++ + L +E+ G ++ S
Sbjct: 41 KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
+ LI F + D G+++ ++++LG E S VT L++GLC EG++ + L D
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
RG+ P + Y ++ L G A AL + ++ K G +P+V+ +TLI+G + E
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A + + M+ +G P+ T+ L+ C + R +A +L KGL PD +T+ ++S
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G R R + L + G P++ TY +DGL
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%)
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
K D AL FR M + P +V F+ L ++ V ++ E+ LG E +
Sbjct: 41 KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL++ C+ RV ++ + G+ P + L+ LC EG + + D++
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G P+V +I L + K EA G +++M K G +P+ V ++ L++ C G+ +
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + L +KG P+ TY L++GY + R +E L++E L +G +PD+ T+ + +
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280
Query: 479 GLSNA 483
GL A
Sbjct: 281 GLCRA 285
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K + + F+ M++ +P++ IY +LI+ KC + + R++ +
Sbjct: 314 LDGLCKHGNLEEAFALFQEMQR-STVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+V T+ L+ C+ A LFR+M E GC P+ ++N +I+GF +
Sbjct: 373 LKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMAR 432
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+ EM+ G + T +L D N+ LK
Sbjct: 433 QLVEEMVNRGFSADAATRALLNDFPTNDIPALKT 466
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-----DVGRT 416
LP ++ + L + R+ L +++ GI D + + L+ C D G +
Sbjct: 59 LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
V + L+L GL+P +T+ L++G E + + L ++ML G P++ TYN
Sbjct: 119 VLSKILKL-----GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173
Query: 477 MDGLSNARKS 486
++ LS + K+
Sbjct: 174 INSLSKSGKA 183
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 178/388 (45%), Gaps = 34/388 (8%)
Query: 104 SFRH--DHTTFLFIVRSLASSYRFSELHSVLN-----FISANPCPCSN--DGIFSCPEME 154
S RH D+TT +V+SL R + ++ ++AN S DG+ C ++
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236
Query: 155 R-------------------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ ++ KA R+ D + FE M P+ YN
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM----SCAPTAITYNS 292
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI G+ + + D+A+ +MV D PDV+T+ L+S FC+ + D A LF++M
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+P+VV+F +L+ G GE + ++ + + E+ GC + T +VDG C +V KA
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTLI-E 373
ELV DF RG +P Y LV C G AL+ +D+L +G P+ +A +I +
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L R + +A E+M++ G +P + TF ++ LC + A L G P
Sbjct: 473 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 532
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEM 461
T +VS Y R ++ + L +E+
Sbjct: 533 GPGTCDAVVSAYCRAGMIQKADELASEL 560
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 192/431 (44%), Gaps = 25/431 (5%)
Query: 61 LLTPTNNQITPSSLLH-FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSL 119
LL + + P +LLH + L + H + + D+ D T+ +V L
Sbjct: 103 LLDMKSRGMNPGTLLHNVVIGGLCRAGRLRH---ALGVYRQMNDAHPPDFLTYTKLVHGL 159
Query: 120 ASSYRFSELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+ + R + VL +SA P + V + +R++D E
Sbjct: 160 SKAGRLRDAVQVLQEMVSARHVPDNT-----------TLTVVVQSLCLGDRVDDARELVE 208
Query: 179 AMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFY-DRMVRDRVKPDVVTFNILISGFC 236
M L G + +I Y+ L++G KC D+A+ + R PD+VT++ +I G C
Sbjct: 209 EM--LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC 266
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + A+ +F EM C P +++N+LI G+ DE + + +M++ C +
Sbjct: 267 KAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+ C GR+ A EL + P + LV+ LCGEG ALE+++E+
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
++G P++ +++G + + +A L+ G +P++VT+N L+ C GRT
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Query: 417 VDA-DRLRLLASTKGLDPDGMT-YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A L L S G P + Y I++ R+ R + EM+ G++P AT+
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503
Query: 475 SYMDGLSNARK 485
+ + L A +
Sbjct: 504 TVVFALCKAHQ 514
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 8/333 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYD 214
+ + + +A R+ L + R++ D P Y L++G K A+
Sbjct: 117 LHNVVIGGLCRAGRLRHALGVY---RQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQ 173
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV R PD T +++ C + D A L EM +G N ++++ L+ G
Sbjct: 174 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCE 233
Query: 275 KFDEGVNMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE V + E+ G VT ++DGLC GR+ A ++ F P Y
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI---FEEMSCAPTAITY 290
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C G+ A+ ++ ++ P VI TTL+ ++ + +A L ++M+
Sbjct: 291 NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVA 350
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ PD VTF L++ LC GR DA L + +G P TY+ +V GY + N+ ++
Sbjct: 351 NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRK 410
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E LV + GF+P+ TYN + G A ++
Sbjct: 411 AEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 224 DVVTFNILISGFCRNKKF-DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D TF +++ G + K L L E+R++G +P+ V NT++ R + +
Sbjct: 9 DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+M ELG + T L+ LC + +A L++D RG+ P + ++ LC
Sbjct: 69 FDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G AL V ++ + P + T L+ GL + + +A ++++M+ +PD+ T
Sbjct: 128 AGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTT 186
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN-LVNEM 461
+++ LC R DA L +G+ + +TY LV G + R E L+ E+
Sbjct: 187 LTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEV 246
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
GF PD+ TY++ +DGL A +
Sbjct: 247 TRRGFTPDIVTYSTVIDGLCKAGR 270
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 218/461 (47%), Gaps = 20/461 (4%)
Query: 39 LPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAW 98
L ++T T+ THLL L P QIT L L S T F +A
Sbjct: 12 LKTLTSILTSEKTHLLE-----TLNPYIPQITQPLLSSLLSSPSLAKKPETLVSFFQWAQ 66
Query: 99 ASTIDSFRHDHTT-FLFIVRSLASSYRFSELHSVL-NFISANPCPCS--NDGI-----FS 149
+S ++F D L +VRSL S ++F++ S+L ++I + S N + S
Sbjct: 67 SSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLS 126
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK---CREF 206
P + +F A++A++ A + + L F+ M +L +P++ N L+ G V+
Sbjct: 127 PPPSKALFDIALSAYLHAGKPHVALQVFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNT 265
A +D MV+ V DV TFN+L++G+C K + ALG+ M E NP+ V++NT
Sbjct: 186 ASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNT 245
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+++ + + + ++ +M G + VT LV G C G + +A ++V +
Sbjct: 246 ILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+LP Y L+ +C G+ LE++D + P V+ TLI+G L +EA
Sbjct: 306 ILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAK 365
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSG 444
LME+M +G+ P+ VT N L+ LC + + R ++ L G PD +TYH L+
Sbjct: 366 KLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKA 425
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y + ++ EM +G + T N+ +D L RK
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N A + +GL + M+ L +P V YN LI+G + +A ++M
Sbjct: 313 YNILINGVCNAGSIREGLELMDVMKSL-KLQPDVVTYNTLIDGCFELGLSLEAKKLMEQM 371
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERK 275
D VKP+ VT NI + C+ +K + +E+ E G +P++V+++TLI+ +
Sbjct: 372 ENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ M EM + G + +++T ++D LC E +V +A L+ +RG + + Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ E A E+ DE+ + P+V +LI GL K A +++ + G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+LPD TFN ++ C GR A + PD T +IL++G +E ++
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
N N ++ E + D TYN+ + +K
Sbjct: 612 NFFNTLITEREV-DTVTYNTMISAFCKDKK 640
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ LI ++K + AL M + +K + +T N ++ C+ +K D A L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNL 473
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++G + V++ TLI G+F E K ++ M EM + + T L+ GLC+
Sbjct: 474 LDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ A E + + G+LP D + ++ C EG A E +E K P
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C L+ GL + +A ++ E + D+VT+N ++ C + +A L
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
K L+PD TY+ +++ + + E + L+ +
Sbjct: 653 EKRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 152/294 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLI+G K + Y++M D V P++ T+N +++ C++ + A LF EMR
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMR 295
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G + N+V++NTLI G E K +E + +M G + +T L+DG C G++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L D RG+ P Y LV C +G+ A +VV E+ ++G PS I T LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILI 415
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ R+ +A L M + G+ PD T++ L+ C G+ +A RL L K L+
Sbjct: 416 DTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLE 475
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
P+ + Y+ +V GY +E L EM ++ P++A+Y ++ L RKS
Sbjct: 476 PNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 203/436 (46%), Gaps = 18/436 (4%)
Query: 58 KTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVR 117
KT +L T ++ P L S H Q TH I + + L V
Sbjct: 7 KTLILLATLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVI 66
Query: 118 SLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAF 177
S +F S+L++++ + + R++ +NA+V++ ++ + F
Sbjct: 67 SGKIQSQFFTSSSLLHYVTESE---------TSETKSRLYEVMINAYVQSQSLDSSISYF 117
Query: 178 EAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
M +D P + +N L+ V F++ F++ + +V DV +F I+I G
Sbjct: 118 NEM---VDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDVYSFGIVIKGC 173
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C + + + L E+RE G +PNVV + TLI G + ++ ++ +EM + G +
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANE 233
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
T +L+ GL G + E+ GV P + Y ++ + C +G A ++ DE
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ ++G +++ TLI GL R K EA+ +M++M +GI P+ +T+N L++ C VG+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L ++GL P +TY+ILVSG+ ++ +V EM + G P TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413
Query: 476 YMDG---LSNARKSVR 488
+D + N K+++
Sbjct: 414 LIDTFARMDNMEKAIQ 429
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 165 VKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
+KAN N + M+ DG P++ YN LI+GF + KAL + + P
Sbjct: 317 MKANEANK---VMDQMKS--DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+VT+NIL+SGFC+ A + +EM E+G P+ +++ LI F ++ + +
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M ELG T +L+ G C +G++ +A L + + P Y +V C E
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G++ AL + E+ +K P+V + +IE L + RK EA GL+EKM+ GI P
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSIL 551
Query: 404 NCL 406
N +
Sbjct: 552 NLI 554
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ F +MN+ F+ M +KL P+ IYN ++ G+ K +AL +
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKLMVAKKL---EPNKVIYNTMVLGYCKEGSSYRALRLFR 502
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M + P+V ++ +I C+ +K A GL +M + G +P+ N + R
Sbjct: 503 EMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 4/305 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFD--KALGFYDRMVRDRVKPDVVTFNILISGF 235
EA L + P + YN +++ C EF + + MV+ ++P+VVT+ ++ F
Sbjct: 210 EARGFLAETVPVQASYNAVVHAL--CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 267
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ ++ +A + M GC PNV++F L++GFF + K + ++M + M++ G S+
Sbjct: 268 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 327
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
++ +L+ GLC G + A + R +LP Y LV+ G+ A+ + +E
Sbjct: 328 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 387
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ G P+V+ T +I+ L + +A L++KML + P++VTFN L+ LCD GR
Sbjct: 388 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 447
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A + G P+ TY+ L+ G RE K+ +V EML+ GF L TYN+
Sbjct: 448 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 507
Query: 476 YMDGL 480
++ L
Sbjct: 508 VINCL 512
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 167/380 (43%), Gaps = 23/380 (6%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
DS RH T VR LA++ + L + C+ D + + A+
Sbjct: 49 DSARHHEAT----VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVA----------AIG 94
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
AF +A + L F L P V +YN L++ ++ + YD M + V
Sbjct: 95 AFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVD 154
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+V T+N+LI C+N + D A + EM KGC+P+ VS T++ G + +E
Sbjct: 155 PNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGF 214
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
E + + +++V V LC E R+ + +V + +RG+ P Y +V+ C
Sbjct: 215 LAETVPVQASYNAV-----VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+A ++ + G P+V+ T L++G K +A + M+ EG P +++
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+N L+ LC +G A L S K L P+ TY LV G++ + NE
Sbjct: 330 YNVLIRGLCCIGDLKGA--LDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 387
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M G P++ Y + +D L
Sbjct: 388 MKSSGCKPNVVVYTNMIDVL 407
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 5/320 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYD 214
F V F + +++D L + M +D PS YNVLI G + AL F++
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWM---VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ + P+ T++ L+ GF D A+ ++ EM+ GC PNVV + +I +
Sbjct: 352 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 411
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
FD+ ++ +M+ C ++VT L+ LC+ GRV +A + R G P D Y
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EGN A +V E+ G S++ T+I L ++ A L+ +M+ +
Sbjct: 472 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 531
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD+ TFN ++ C G+ A L + + + Y IL+S + +
Sbjct: 532 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 591
Query: 455 ENLVNEMLDEGFIPDLATYN 474
+ +ML EG P+ AT+N
Sbjct: 592 MVYLLKMLYEGICPNEATWN 611
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ F A ++ +L + M K +P+V +Y +I+ K FD+A D+M+ D
Sbjct: 369 VDGFSNAGDLDGAMLIWNEM-KSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VTFN LI C + AL +F MR GC+PN ++N L+ G F E +
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 487
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M EM+ G E S VT +++ LC A L+ +G+ P F + ++
Sbjct: 488 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 547
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG IA ++ ++ +V+A T LI L K A + KML EGI P+
Sbjct: 548 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 607
Query: 401 VTFNCLLEDL 410
T+N L+ +
Sbjct: 608 ATWNVLVRAI 617
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
+CP F+ + R+ L F MR+ +G P+ YN L++G +
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR--NGCHPNDRTYNELLHGLFREGNHK 484
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A M+ + + +VT+N +I+ C+ A+ L M +G P+ +FN +I
Sbjct: 485 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 544
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ E K + +M + C + V IL+ LCN+G++ A ++ G+
Sbjct: 545 HAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC 604
Query: 328 PKDFDYFGLVEKL 340
P + + LV +
Sbjct: 605 PNEATWNVLVRAI 617
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L E G + V D + K G P+V LI L + + A ++++M
Sbjct: 125 YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 184
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G PD V+ ++ +C +GR +A LA T P +Y+ +V E R
Sbjct: 185 RKGCHPDEVSHGTIVSGMCKLGRVEEARGF--LAETV---PVQASYNAVVHALCGEFRMW 239
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E ++VNEM+ G P++ TY + +D AR+
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 272
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R ++ G +P +N +I+ + K + A +M +VV + ILIS C
Sbjct: 527 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 586
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
K A+ +M +G PN ++N L+R F
Sbjct: 587 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 618
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 172/320 (53%), Gaps = 5/320 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
+++ +++ K +N+ AF+ ++I P V Y+ LI+GF + + A+ +
Sbjct: 227 MYNTIIDSMCKVKLVNE---AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M+ + +KPDV TFNIL++ FC++ K +F M ++G PN V++N+L+ G+
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ ++ M + G + I+++G C + +A L + R+ ++P Y
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L G AL++VD++ +G P++ ++++ L ++ + +A L+ K+
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI P+ T++ L++ LC G+ DA ++ KG + + TY I++ G+ E E
Sbjct: 464 KGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNE 523
Query: 454 GENLVNEMLDEGFIPDLATY 473
L+++M D G IPD TY
Sbjct: 524 ALALLSKMEDNGCIPDAKTY 543
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 154/308 (50%), Gaps = 1/308 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F ++ND + F M L + +P V +N+L+N F K + + +D M++
Sbjct: 267 ISGFCILGKLNDAIDLFNKMI-LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+ VT+N L+ G+C K+ + A +F M + G NP++ S++ +I GF +KFDE +
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM VT L+DGL GR+ A +LV RGV P Y +++ L
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A+ ++ +L KG P++ + LI+GL + K +A + E +L +G +
Sbjct: 446 CKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNV 505
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+ +++ C G +A L G PD TY I++ +++ E L+ E
Sbjct: 506 DTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565
Query: 461 MLDEGFIP 468
M+ G P
Sbjct: 566 MIARGVRP 573
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 152/294 (51%), Gaps = 2/294 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G K E AL R+ + V+P+VV +N +I C+ K + A LF EM
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +P+VV+++ LI GF K ++ +++ +MI + T ILV+ C +G+ +
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK-M 311
Query: 313 KACELVIDFS-RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
K + V D ++G+ P Y L++ C A + + + + G P + + + +
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G +++K EA L ++M ++ I+PD VT++ L++ L GR A +L +G+
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P TY+ ++ + ++ + L+ ++ D+G P++ TY+ + GL + K
Sbjct: 432 PPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 150/323 (46%), Gaps = 1/323 (0%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F N ++D + F + + P+ +N ++ VK + + L +M +K
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIK 117
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P++V NILI+ FC+ A +F ++ + G P+ ++F TLI+G + + +
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLF 177
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+++ LG F ++ L+ GLC G A +L+ V P Y +++ +C
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A ++ E+ KG P V+ + LI G L K +A L KM+ E I PD T
Sbjct: 238 VKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT 297
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
FN L+ C G+ + + + +G+ P+ +TY+ L+ GY + +++ N M
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
G PD+ +Y+ ++G +K
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKK 380
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LI G + +A F+D++V D +++ LI G C+ + AL L
Sbjct: 153 PDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL 212
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + PNVV +NT+I + +E ++ EMI G VT L+ G C
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCI 272
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A +L + P + + LV C +G V D + K+G P+ +
Sbjct: 273 LGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++G +++ +A + M + G+ PD +++ ++ C + + +A L
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + PD +TY L+ G ++ R LV++M D G P + TYNS +D L
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
K + ++++ + F N D A+ LF + + P FN ++ + + +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
++ +M G + + V C IL++ C G + A + + G +P + L++ LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
+G A D++ G I+ TLI GL ++ + A L++++ + P+ V
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N +++ +C V +A L +KG+ PD +TY L+SG+ + + +L N+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286
Query: 462 LDEGFIPDLATYN 474
+ E PD+ T+N
Sbjct: 287 ILENIKPDVYTFN 299
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 69/280 (24%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK------------LIDG------------------ 186
F+ VNAF K +M +G F+ M K L+DG
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF------- 235
P + Y+++INGF K ++FD+A+ + M R + PDVVT++ LI G
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 236 ----------------------------CRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
C+ + D A+ L ++++KG PN+ +++ LI
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+G K ++ + ++ G + T I++ G C EG +A L+ G +
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
P Y ++ L + +A +++ E+ +G P IA
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 5/332 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ ++ K + DGL E M+ RP+ YN LI+GF K FD+A + +
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + V+P+V+T N L+ G C++ + A+ F EM+ KG N ++ LI F G
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM+ GC +V L+ GLC GR+ A +V G Y
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C + E++ E+ + G P I TLI L + AS +MEKM+KEG
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRL---LASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P VT+ ++ C + VD + +++ + ST + P+ + Y+IL+ R N
Sbjct: 599 LRPSVVTYGAIIHAYCS-KKNVD-EGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+L+ +M + P+ TYN+ + G+ + +
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYNAILKGVRDKK 688
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 143/305 (46%), Gaps = 9/305 (2%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
+ G + N L+ + R+ + M + +++P VVTF IL++ C+ ++ D
Sbjct: 275 LGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDE 334
Query: 244 ALGLFREMREK------GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSS 295
AL +F +R K G P+VV FNTLI G K ++G+++ EM ++G ++
Sbjct: 335 ALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM-KMGNINRPNT 393
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT L+DG G +A EL + GV P LV+ LC G A+E +E
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNE 453
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ KG + T LI + A E+ML G PD+V + L+ LC GR
Sbjct: 454 MKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGR 513
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
DA + G D Y++L+SG+ ++ + + L+ EM + G PD TYN+
Sbjct: 514 MNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNT 573
Query: 476 YMDGL 480
+ L
Sbjct: 574 LISYL 578
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 4/256 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++AF N +N + FE M L G P +Y LI+G + A ++
Sbjct: 470 ISAFCGVNNINRAMQCFEEM--LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
D +N+LISGFC+ KK + L EM E G P+ +++NTLI F
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVE 338
+ +MI+ G S VT ++ C++ V + ++ + S V P Y L++
Sbjct: 588 SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC + A+ +++++ K P+ +++G+R + +A LM++M++E P
Sbjct: 648 ALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRP 707
Query: 399 DSVTFNCLLEDLCDVG 414
D +T L E L VG
Sbjct: 708 DYITMEVLTEWLSAVG 723
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+L LF ++ +P + + L+R + + +++ EM + FS VT EI+
Sbjct: 160 SLLLFNQLDPSSKSPQLC--HGLLRVLLKSGRAGDALHVLDEMPQANSGFS-VTGEIVFG 216
Query: 304 GLCNEGRVLKACE---LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L GR E LV RGV P F LV KLCG+ G+A EV+ + + G
Sbjct: 217 ELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLG 276
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA- 419
+C L+ L R R + L+ +M K I P VTF L+ LC R +A
Sbjct: 277 GAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEAL 336
Query: 420 ---DRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI--PDLAT 472
DRLR + G++PD + ++ L+ G + + ++G +L+ EM G I P+ T
Sbjct: 337 QVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM-KMGNINRPNTVT 395
Query: 473 YNSYMDGLSNA 483
YN +DG A
Sbjct: 396 YNCLIDGFFKA 406
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 169 RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR-DRVKPDV 225
+ D A + M K+I RPSV Y +I+ + + D+ + + M +V P+
Sbjct: 580 KTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNT 639
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
V +NILI CRN D A+ L +M+ K PN ++N +++G ++ + +
Sbjct: 640 VIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDR 699
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLK 313
M+E C +T E+L + L G + K
Sbjct: 700 MVEEACRPDYITMEVLTEWLSAVGEIEK 727
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 163/345 (47%), Gaps = 45/345 (13%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC-------- 236
D +P+V Y++LI+G K + +KAL +D+M+ + P TFN +I+G C
Sbjct: 534 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 593
Query: 237 RNK---------------------------KFDLALGLFREMREKGCNPNVVSFNTLIRG 269
R+K D AL ++REM E G +PNVV++ +LI G
Sbjct: 594 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 653
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + D + EM E G E L+DG C + A +L + G+ P
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 713
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC-----TTLIEGLRRLRKGVEA 384
Y ++ N AL +W K + I C TTLI+GL + + V A
Sbjct: 714 RIVYNSMISGFRDLNNMEAAL-----VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 768
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
S L +ML +GI+PD +TF+ L+ LC+ G+ +A ++ K + P + Y+ L++G
Sbjct: 769 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 828
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
Y RE KE L +EMLD G +PD TY+ ++G +S+ +
Sbjct: 829 YFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSR 873
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 177 FEAMRKLID-----GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+E KL D G ++ YN++++ K + D+A D MV + P+VV++N +
Sbjct: 451 WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G CR D+A +F +M + PNVV+++ LI G F + ++ +++ +M+ L
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ T +++GLC G++ +A + + +F G +P Y +V+ EGN AL
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
V E+ + G P+V+ T+LI G + + A ++M ++G+ D ++ L++ C
Sbjct: 631 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 690
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
A L GL P+ + Y+ ++SG+ N + +M+++ DL
Sbjct: 691 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 750
Query: 472 TYNSYMDGL 480
TY + +DGL
Sbjct: 751 TYTTLIDGL 759
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 215/512 (41%), Gaps = 65/512 (12%)
Query: 19 PPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFL 78
P P P P + +P + P + +P ++ T + + + TP S H +
Sbjct: 51 PEDPNPKANFPEKI-SPESSFPGNSSSPYPRYSQ-----DTVPTSQIHQETTPLSQNHVI 104
Query: 79 KSKLHH--HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS----VL 132
+ L H PQ F A T F + ++ L R E H +L
Sbjct: 105 DALLCHVNDPQSA---LRYFKRAETQRGFIRGVDAYCVLLHILM---RSPETHGHARKLL 158
Query: 133 N-FIS--ANPCPCS-NDGIFSCPEM------ERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
N ++S ++P P D + +C + R+F++ +NA+++ANR+ + + F AM
Sbjct: 159 NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAM-I 217
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV------------------------- 217
D P V N+L+ V+ + Y++MV
Sbjct: 218 CQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVE 277
Query: 218 ---------RDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
++R VK D ++I+I C+ +L L L EM+E+G P+ +F ++I
Sbjct: 278 EAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 337
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ E + + EMI G + V L+ G C +G + A L + G+
Sbjct: 338 VACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLF 397
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+E C GN A E+ ++ G PSV +L+ G + EAS L
Sbjct: 398 PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKL 457
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ + G+ + T+N ++ LC G+ +A L +G+ P+ ++Y+ ++ G+ R
Sbjct: 458 FDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCR 516
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++ ++ML P++ TY+ +DG
Sbjct: 517 KGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 1/293 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV N L+ G++K +++A +D V D ++ T+NI++S C+ K D A L
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSL 491
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +G PNVVS+N +I G + D ++ +M+ + + VT IL+DG
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G KA +L + P DF + ++ LC G A + + ++G +PS +
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++++G + A + +M + G+ P+ VT+ L+ C R A + R
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL+ D Y L+ G+ + + ++L E+L+ G P+ YNS + G
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L+N +++ + A+ ++ M+ V P V NIL++ R +G R++
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRN----MIGELRDL 247
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
K ++RG +G+ T ++V EGRV
Sbjct: 248 YNK----------MVLRGIYGDH---------------------FTVHVMVRACLKEGRV 276
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A E + RGV Y +++ +C + N+ + LE+++E+ ++G +PS T++
Sbjct: 277 EEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSV 336
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I VEA L E+M+ G + V L++ C G A L + GL
Sbjct: 337 IVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGL 396
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY +L+ G ++ L +M G P + NS + G A
Sbjct: 397 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 448
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 4/327 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID-GRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + ++ R D A ++ ++D G P V Y LI+ K ++ +A+ +D+
Sbjct: 364 FNLVIKGLLRDKRWKD---AIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDK 420
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M VKP +VT++ L+ G+C + D AL L+ EM +KG PN V++ TL++G+ ++
Sbjct: 421 MKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKA 480
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
FD + EM + G T IL++GL RV + E++ F G +P Y
Sbjct: 481 FDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNS 540
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ G G A + ++ KKG P+++ T+ I+G R A L+ + ++G
Sbjct: 541 IINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD +N ++ C G A +L GL PD Y+ V+GY E
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
M+ + + D Y + +DG S
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSK 687
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 154/312 (49%), Gaps = 9/312 (2%)
Query: 172 DGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
D L F+ MR G+ +Y+V+I V+ A+ +D M VKPD +
Sbjct: 168 DALTLFDEMR----GKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVY 223
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-I 287
I ISG C+ + D AL + +MRE G P +++++++ R+ DE + + +M +
Sbjct: 224 AITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLL 283
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + V +L+ G C G V KA +L + GV P + Y L++ EG
Sbjct: 284 ATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTD 343
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
++ ++ ++G LPS +I+GL R ++ +A GL++ ++ G+ PD T+ CL+
Sbjct: 344 ETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLI 402
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC + +A L G+ P +TYH L+ GY + R E L +EM D+GF
Sbjct: 403 HWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFP 462
Query: 468 PDLATYNSYMDG 479
P+ TY + M G
Sbjct: 463 PNEVTYTTLMKG 474
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 1/326 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + V+ VK RM++ L + M + V + +L++G+ E KAL +
Sbjct: 255 ELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLF 314
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D +V D V P VT+ +LI G D L R+M E+G P+ FN +I+G +
Sbjct: 315 DEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRD 374
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+++ + + + +++ G T L+ LC ++ +A L GV P Y
Sbjct: 375 KRWKDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C +G AL++ E+ KG P+ + TTL++G + + A L+ +M +
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ T+N L+ L V R + D + ++G P MTY+ +++G+ +
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+ +M +G P++ TY S++DG
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDG 579
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 156/386 (40%), Gaps = 75/386 (19%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K ++++ + ++ M++ +PS+ Y+ L+ G+ + D+AL Y M
Sbjct: 402 IHWLCKHQKLHEAVNLWDKMKE-AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN----------------------- 257
P+ VT+ L+ G+ + K FD A L EMR+ G +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520
Query: 258 ------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
P +++N++I GF M +M + G + VT +DG
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C A +L+I R G+ P Y ++ C +GN AL + L K G P V
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKE------------------------------- 394
+ + G + L+ EAS M+K+
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700
Query: 395 ----GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRE 448
++PD TF L LC G +D + RLL + LD P+ +TY++L++ R+
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSG-DIDGAK-RLLDDMRRLDVSPNIVTYNMLINACVRD 758
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYN 474
+ +E L +EML G +PD TY+
Sbjct: 759 GKLQEAFQLHDEMLSSGVVPDDTTYD 784
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 15/339 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ +++ F +++LN + N C + ++ +N
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG----------DYTYNILINGL 510
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
NR+ + E +++ + P+ YN +INGFVK A G Y +M + +
Sbjct: 511 YMVNRVCE---VDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGIT 567
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P++VT+ I G+CR DLA+ L +R G P++ ++N I F + ++
Sbjct: 568 PNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHF 627
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+++ G V G N + +A + ++ V+ Y L++
Sbjct: 628 LVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSK 687
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
GN ALE+ E+ +P T L GL R A L++ M + + P+ VT
Sbjct: 688 VGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVT 747
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+N L+ G+ +A +L + G+ PD TY IL
Sbjct: 748 YNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + L +G + + D A D M R V P++VT+N+LI+ R+ K A L
Sbjct: 708 PDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQL 767
Query: 248 FREMREKGCNPNVVSFNTLIR 268
EM G P+ +++ L R
Sbjct: 768 HDEMLSSGVVPDDTTYDILPR 788
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G +P + T L+ +A L ++M +G D+ ++ ++ G D
Sbjct: 144 RGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCD 203
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A RL + G+ PD Y I +SG + ++ +M + GF P TY+S +D
Sbjct: 204 AVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVD 263
Query: 479 GLSNARK 485
L R+
Sbjct: 264 VLVKVRR 270
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 35/366 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K+ L + L+ RP V +Y +I+ F K + A Y M+ +
Sbjct: 165 INGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 224
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+VVTFN LI GFC + A+GL EM NPNV +FN LI G E + +
Sbjct: 225 IYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKAT 284
Query: 281 NMAYEMIELGCEFSSVTC-----------------------------------EILVDGL 305
++ MI+ G E + VT ++++GL
Sbjct: 285 SVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGL 344
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C V +A +L + + + P Y L++ LC G +++DE+ +G ++
Sbjct: 345 CKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANI 404
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +L+ GL + + +A L+ KM EGI PD T+ L++ LC GR DA R+
Sbjct: 405 ITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG + Y ++++G +E E +L+++M D G +PD TY + + L K
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNK 524
Query: 486 SVRQTR 491
+ + +
Sbjct: 525 NGKAVK 530
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 153/316 (48%), Gaps = 5/316 (1%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ ++D + +F + + + P + +N +++ VK F A+ F +M ++P++ T
Sbjct: 31 DNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFT 90
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNILI+ F + + A + ++ + G P+ V+ NTL+RG K E +N +I
Sbjct: 91 FNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVI 150
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL---PKDFDYFGLVEKLCGEG 344
V+ L++GLC G A +L+ G+L P Y +++ C +
Sbjct: 151 RKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDK 208
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A ++ E+ K P+V+ +LI G + + EA GL+ +M + P+ TFN
Sbjct: 209 LVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFN 268
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ LC G A + + +G++P+ +TY L+ GY + +++ N +
Sbjct: 269 ILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328
Query: 465 GFIPDLATYNSYMDGL 480
G P++ +Y+ ++GL
Sbjct: 329 GVTPNVHSYSVMINGL 344
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N+LI+G K E KA M++ V+P+VVT+ L+ G+ K+ + A +
Sbjct: 262 PNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHV 321
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F + +G PNV S++ +I G + DE V + EM ++VT L+DGLC
Sbjct: 322 FNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCK 381
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +L+ + + RG Y L+ LC A+ ++ ++ +G P +
Sbjct: 382 SGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMST 441
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++GL + + +A + + +L +G + + ++ LC G +A L
Sbjct: 442 YTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQME 501
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
G PD +TY L+S + N+ + L+ EM+
Sbjct: 502 DNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N K +++ + F+ M L + P+ Y+ LI+G K D
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMH-LKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDE- 394
Query: 217 VRDRVKP-DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +R +P +++T+N L++G C+N + D A+ L +M+++G P++ ++ TL+ G +
Sbjct: 395 INNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGR 454
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + +++ G + ++++GLC EG +A L+ G +P Y
Sbjct: 455 LKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYET 514
Query: 336 LVEKLCGEGNAGIALEVVDEL 356
L+ L G A++++ E+
Sbjct: 515 LISALFKNNKNGKAVKLLREM 535
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 13/170 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID-----GRPS-VSIYNVLINGFVKCREFDKALGFYD 214
++ K+ R++D + LID G+P+ + YN L+NG K + DKA+
Sbjct: 376 IDGLCKSGRISD-------VWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLT 428
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M + ++PD+ T+ L+ G C+N + A +++++ KG N+ + +I G E
Sbjct: 429 KMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG 488
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
FDE +++ +M + GC +VT E L+ L + KA +L+ + R
Sbjct: 489 FFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 176/391 (45%), Gaps = 12/391 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F F W + SFR T ++ LA F +L + N I P
Sbjct: 81 FRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGFDTYWKILEELK-------NSNIQIPPP 132
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
F + A+ K+ + +F M+ +P V YN +++ V+ F AL
Sbjct: 133 ---TFSVLIAAYAKSGMAEKAVESFGKMKDF-GCKPDVFTYNSILHVMVQKEVFLLALAV 188
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y++M++ P+ TF IL++G C+N K D AL +F EM +KG PN + + ++ G
Sbjct: 189 YNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQ 248
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
++ D+ + M GC S+TC L+DG C G++ +A L+ F + G +
Sbjct: 249 AKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKG 308
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L E +++K G P V+ T LI G + A ++ M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ G+ PD+ +N L++ CDVG A L+L S P TY IL+ G R
Sbjct: 369 QRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLD 428
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E + N+M + G P + T+N+ +DGL A
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKA 459
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 22/316 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN LI GF DKA + ++ P T+ ILI G CRN D A +
Sbjct: 374 PDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQI 433
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE--------------F 293
F +M GC+P++++FN LI G + +E ++ Y+M E+G
Sbjct: 434 FNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVM 492
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ + + +V+ LC G +LKA +L++ + GV+P Y L+ C N A ++
Sbjct: 493 DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLF 552
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
EL KG+ P + TLI+G R+ + +A ++++M+K G P S + CL+ C
Sbjct: 553 RELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRK 612
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP---DL 470
G+ A L L + T + + + E E V +L+ F ++
Sbjct: 613 GKLSVAFSLWLKYLRSLPSQEDETLKLAEEHF----EKGELEKAVRCLLEMNFKLNNFEI 668
Query: 471 ATYNSYMDGLSNARKS 486
A Y ++ GL AR+S
Sbjct: 669 APYTIWLIGLCQARRS 684
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 151/342 (44%), Gaps = 16/342 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +N K + +D L F+ M +K I P+ IY ++++G + + D +
Sbjct: 204 FVILLNGLCKNGKTDDALKMFDEMTQKGIP--PNTMIYTIILSGLCQAKRTDDVHRLLNT 261
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M PD +T N L+ GFC+ + D A L + ++G + +++LI G F ++
Sbjct: 262 MKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+DE +M + G E V IL+ G C G V A ++ D ++RG+ P + Y
Sbjct: 322 YDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNA 381
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G A + E+ K P+ T LI G+ R EA + +M G
Sbjct: 382 LIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL-----------RLLASTKGLDP--DGMTYHILV 442
P +TFN L++ LC G +A L L ++G D D + +V
Sbjct: 442 CSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMV 501
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ L+ ++ D G +PD+ TYN ++G A+
Sbjct: 502 ERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAK 543
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
KA ++ V PD++T+N+LI+GFC+ K + A LFRE++ KG +P+ V++ TLI
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI 571
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF + ++ + +M++ GC SS + L+ C +G++ A L + + R L
Sbjct: 572 DGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS--L 629
Query: 328 PKDFD-YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P D L E+ +G A+ + E+ K N + T + GL + R+ EA
Sbjct: 630 PSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALK 689
Query: 387 --LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ K + + P S L+ LC G A + L KG + L+
Sbjct: 690 IFLVLKECQMDVNPPSCVM--LINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRS 747
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATY 473
+++ K +L+N M G+ DL Y
Sbjct: 748 LILQDKMKHALDLLNRMNSAGY--DLDEY 774
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%)
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V+ N +I + FD + E+ + T +L+ G KA E
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
G P F Y ++ + + +AL V +++ K P+ L+ GL + K
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A + ++M ++GI P+++ + +L LC RT D RL G PD +T +
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ G+ + + E L+ EG++ + Y+S +DGL A++
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 36/354 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A KA + FE MR+ V+ YNV+I+G + ++A GF + MV
Sbjct: 250 IEAHCKARDFDAAKKVFEEMRRRDCAMNEVT-YNVMISGLCRSGAVEEAFGFKEEMVDYG 308
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD T+ L++G C+ + A L EM G PN+V + TL+ GF E K E
Sbjct: 309 LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAF 368
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EMI G + + + + L+ GLC G++ +A +L+ + + G+ P F Y L++
Sbjct: 369 DILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGH 428
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG----- 395
+ + A E+++E+ G LP+V + +I GL + + EA L+E+M+ EG
Sbjct: 429 FQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 488
Query: 396 ------------------------------ILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ PD +N L++ L VGR +A+
Sbjct: 489 FMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+GL PD TY L+ GY + ++ + L+ +ML+ G P+ TY ++G
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N K +R+ + + M G +P++ +Y L++GF+K + +A M+
Sbjct: 320 MNGLCKGSRLKEAKALLDEMS--CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA 377
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V+P+ + ++ LI G C+ + A L +EM + G P+ ++N L++G F + D
Sbjct: 378 GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGA 437
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM G + + I+++GLC G +A L+ + G+ P F Y L+
Sbjct: 438 FELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 497
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EGN +A E ++++ K P + +LI+GL + + EA ++ K G++PD
Sbjct: 498 HSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPD 557
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T++ L+ C G AD+L GL P+ TY L+ GY + N ++ +++
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617
Query: 460 EMLDEGFIPDLATYNSYMDGLSNAR 484
ML G PD Y + LS +
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSE 642
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 139/299 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS ++ +VL++ + K A M + P N L+ R +L L
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G P+V +++T I R FD + EM C + VT +++ GLC
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V +A + G+ P F Y L+ LC A ++DE+ G P+++
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G + K EA ++++M+ G+ P+ + ++ L+ LC +G+ A +L
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
GL PD TY+ L+ G+ +++ + L+NEM + G +P++ +Y ++GL +S
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 153/319 (47%), Gaps = 4/319 (1%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA EA+ K+ P + YN LI G ++A +Y ++ + + PD T++ LI
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI 565
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G+C+ + A L R+M G PN ++ L+ G+F +++ ++ M+ G +
Sbjct: 566 HGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDK 625
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ I++ L + A ++ + + G++P Y L+ LC + A+ +
Sbjct: 626 PDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGL 685
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+DE+ K+G P ++ LI+G R A + + +L +G++P+ VT+ L++ C
Sbjct: 686 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCK 745
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G DA L +G+ PD Y++L +G + ++ L EM + G+ +++
Sbjct: 746 NGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSL 804
Query: 473 YNSYMDGLSNARKSVRQTR 491
+N+ + G R +++T
Sbjct: 805 FNTLVHGFCK-RGKLQETE 822
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 153/348 (43%), Gaps = 43/348 (12%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE + ++ + P+V Y ++ING + E +A + M+ + +KP+ + LI
Sbjct: 437 AFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLII 496
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + LA +M + +P++ +N+LI+G + +E ++ + G
Sbjct: 497 GHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVP 556
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE--------------- 338
T L+ G C G + KA +L+ G+ P Y L+E
Sbjct: 557 DEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSIL 616
Query: 339 -KLCGEG-------------------NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ G G N +A V+ E+ K G +P + ++LI GL ++
Sbjct: 617 QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKI 676
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST---KGLDPDG 435
+A GL+++M KEG+ P V +N L++ C R+ D R R + + KGL P+
Sbjct: 677 ADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC---RSGDISRARNVFDSILAKGLVPNC 733
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY L+ G + + +L EMLD G PD YN G S+A
Sbjct: 734 VTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDA 781
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 1/236 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P IY ++I + + A + ++ + PD+ ++ LISG C+ + A+G
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM ++G P +V +N LI GF N+ ++ G + VT L+DG C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + A +L + RG+ P F Y L + AL + +E++ +G +V
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YANVS 803
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
TL+ G + K E L+ M+ I+P++ T ++ + G+ +A R+
Sbjct: 804 LFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRV 859
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 16/254 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ + ++R+L+ S VL + N P++ I+ ++ K
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL---------VPDL-HIYSSLISGLCKI 676
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
M + + M K +G P + YN LI+GF + + +A +D ++ + P+ V
Sbjct: 677 ADMEKAVGLLDEMAK--EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCV 734
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ LI G C+N A L++EM ++G P+ +N L G ++ + + EM
Sbjct: 735 TYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 794
Query: 287 IELGCEFSSVTC-EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
G +++V+ LV G C G++ + +L+ R ++P +V + G
Sbjct: 795 FNRG--YANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGK 852
Query: 346 AGIALEVVDELWKK 359
G A V EL +K
Sbjct: 853 LGEAHRVFAELQQK 866
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 23/352 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + F K M D E M+K + S+ YN+ + G ++ E +A D M
Sbjct: 296 FNLMLKGFCKHGMMGDARGLVETMKK-VGNFDSLECYNIWLMGLLRNGELLEARLVLDEM 354
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V ++P+ T+NI++ G CRN A GL M G P+ V+++TL+ G+ K
Sbjct: 355 VAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKV 414
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E ++ +EMI GC+ ++ TC L+ L EGR L+A E++ + + P +
Sbjct: 415 FEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIV 474
Query: 337 VEKLCGEGNAGIALEVVDELW-------KKGN---------------LPSVIACTTLIEG 374
V LC G A E+V E+W KGN LP I TTLI G
Sbjct: 475 VNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLING 534
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L ++ + EA +ML + + PDSVT++ + C G+ A R+ G
Sbjct: 535 LCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKT 594
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
TY+ L+ G N+ E L +EM ++G PD+ TYN+ + L K+
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKA 646
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 158/359 (44%), Gaps = 39/359 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V + ++D + F+++R PS+ +YN+L+ ++ Y M+
Sbjct: 85 VRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAA 144
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV------------------- 260
RV P TFN+LI C ++ FD AL LF +M +KGC PN
Sbjct: 145 RVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQA 204
Query: 261 ---------------VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
V +NTL+ F E +E + M ELG VT + L
Sbjct: 205 LELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISAL 264
Query: 306 CNEGRVLKACELVIDFSRRGVL----PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
C G+V++A + D L P + +++ C G G A +V+ + K GN
Sbjct: 265 CRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGN 324
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
S+ + GL R + +EA ++++M+ +GI P++ T+N +++ LC DA
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L L G+ PD + Y L+ GY + E +++++EM+ G P+ T N+ + L
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSL 443
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 192/463 (41%), Gaps = 60/463 (12%)
Query: 69 ITPSSLLH--FLKSKLHHH-PQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
++PS L+ L+S L HH P F + + A TF ++ SL S F
Sbjct: 111 LSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQ----TYTFNLLIHSLCESRAF 166
Query: 126 SELHSVLNFISANPCPCSND---GIF---------------------SCPEMERI-FHFA 160
+ + C C N+ GI SC R+ ++
Sbjct: 167 DHALQLFEKMPQKGC-CPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTL 225
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ F + N+ E M +L P V +N I+ + + +A + M D
Sbjct: 226 VSRFCREEMNNEAERLVERMNEL-GVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDA 284
Query: 221 V----KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+P+VVTFN+++ GFC++ A GL M++ G ++ +N + G +
Sbjct: 285 ELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGEL 344
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EM+ G E ++ T I++DGLC + A L+ R GV P Y L
Sbjct: 345 LEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTL 404
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A V+ E+ + G P+ C TL+ L + + +EA +++KM ++
Sbjct: 405 LHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCY 464
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG---LD-------------------PD 434
PD+VT N ++ LC G A + T G LD PD
Sbjct: 465 QPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPD 524
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
G+TY L++G + R +E + EML + PD TY++++
Sbjct: 525 GITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFI 567
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 57/319 (17%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN++++G + A G D M+R+ V PD V ++ L+ G+C K A +
Sbjct: 361 PNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSV 420
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM--------------------- 286
EM GC PN + NTL+ + E + E M +M
Sbjct: 421 LHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCR 480
Query: 287 ---------------------IELGCEFSS---------------VTCEILVDGLCNEGR 310
++ G F+S +T L++GLC GR
Sbjct: 481 NGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGR 540
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A + I+ + + P Y + C +G A V+ ++ + G ++
Sbjct: 541 LEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNA 600
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + E GL ++M ++GI PD T+N ++ LC+ G+ DA L KG
Sbjct: 601 LILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKG 660
Query: 431 LDPDGMTYHILVSGYTREN 449
+ P+ ++ IL+ +++ +
Sbjct: 661 ISPNVSSFKILIKAFSKSS 679
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 149/346 (43%), Gaps = 36/346 (10%)
Query: 174 LLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD------------ 219
L A E ++K+ + +P N+++NG + E DKA M +
Sbjct: 450 LEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFA 509
Query: 220 ----------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
PD +T+ LI+G C+ + + A F EM K P+ V+++T I
Sbjct: 510 SLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWS 569
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + K + +M GC + T L+ GL + ++ + L + +G+ P
Sbjct: 570 FCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPD 629
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ LC G A A+ ++ E+ KG P+V + LI+ + A L E
Sbjct: 630 ICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689
Query: 390 KML-----KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L KE + S+ FN LL G+ +A L ++ + L Y L++
Sbjct: 690 VALNICGRKEALY--SLMFNELLAG----GQLSEAKELFEVSLDRYLTLKNFMYKDLIAR 743
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
++ R + +L+ +++D+G+ D A++ +DGLS R + RQ
Sbjct: 744 LCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSK-RGNKRQA 788
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 9/280 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LING K ++A + M+ ++PD VT++ I FC+ K A +
Sbjct: 523 PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRV 582
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M GC+ + ++N LI G + E + EM E G T ++ LC
Sbjct: 583 LKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCE 642
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV----VDELWKKGNLP 363
G+ A L+ + +G+ P + L++ + +A E+ ++ +K L
Sbjct: 643 GGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALY 702
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
S++ L G + EA L E L + + + L+ LC R DA+ L
Sbjct: 703 SLMFNELLAGG-----QLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLL 757
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
KG D ++ ++ G ++ +++ + L M++
Sbjct: 758 YKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P LI L R A L EKM ++G P+ T L+ LC G A L
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQA--L 205
Query: 423 RLLASTKGLD-PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L+ + + + Y+ LVS + RE E E LV M + G +PD+ T+NS + L
Sbjct: 206 ELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALC 265
Query: 482 NARKSVRQTR 491
A K + +R
Sbjct: 266 RAGKVMEASR 275
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 176/339 (51%), Gaps = 9/339 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGF 212
R++ +N++V++ +N L+ +++D P + +N L+ V F++ F
Sbjct: 95 RLYEVIINSYVQSQSLN---LSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF 151
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++ + +V DV +F ILI G C + + + L E+ E G +PNVV + TLI G
Sbjct: 152 FNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + ++ ++ +EM +LG + T +L++GL G + E+ GV P +
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ +LC +G A +V DE+ ++G +++ TLI GL R K EA+ ++++M
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+GI P+ +T+N L++ C VG+ A L ++GL P +TY+ILVSG+ R+
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLS---NARKSVR 488
+V EM + G P TY +D + N K+++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 152/299 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLING K + Y++M D V P++ T+N +++ C++ + A +F EMR
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G + N+V++NTLI G E K +E + +M G + +T L+DG C G++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L D RG+ P Y LV C +G+ A ++V E+ ++G PS + T LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ R +A L M + G++PD T++ L+ C G+ +A RL K +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
P+ + Y+ ++ GY +E L+ EM ++ P++A+Y ++ L RKS R
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 210/495 (42%), Gaps = 52/495 (10%)
Query: 35 PPVTLPSVTLTPTAH---HTH--------------LLRFLKTHLLTPTNNQI-----TPS 72
PP+ S+ +P H HTH L ++ LL + +I T S
Sbjct: 19 PPLKAFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSHAQSLLLQVISGKIHSQFFTSS 78
Query: 73 SLLHFLKSKLHHHPQFTHYDFHIFAWASTI--------------DSFRHDHTTFLFIVRS 118
SLLH+L +F Y+ I ++ + + F F +++
Sbjct: 79 SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF 138
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+ S F++ S F + N D ++S F + +A + +F+
Sbjct: 139 VVGSSSFNQWWS---FFNENKSKVVLD-VYS-------FGILIKGCCEAGEIEK---SFD 184
Query: 179 AMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
+ +L + P+V IY LI+G K E +KA + M + + + T+ +LI+G
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N ++ +M+E G PN+ ++N ++ + + + + EM E G + V
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+ GLC E ++ +A ++V G+ P Y L++ CG G G AL + +L
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+G PS++ L+ G R A+ ++++M + GI P VT+ L++
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
A +LRL GL PD TY +L+ G+ + + E L M+++ P+ YN+
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 477 MDGLSNARKSVRQTR 491
+ G S R +
Sbjct: 485 ILGYCKEGSSYRALK 499
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 4/289 (1%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
DG+F P + ++ +N K R D F+ MR+ ++ YN LI G +
Sbjct: 262 DGVF--PNL-YTYNCVMNQLCKDGRTKDAFQVFDEMRER-GVSCNIVTYNTLIGGLCREM 317
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ ++A D+M D + P+++T+N LI GFC K AL L R+++ +G +P++V++N
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L+ GF + M EM E G + S VT IL+D + KA +L +
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G++P Y L+ C +G A + + +K P+ + T+I G + A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L+++M ++ + P+ ++ ++E LC ++ +A+RL G+DP
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + + ++N+ + M+ DG P++ YN LI+GF + KAL
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKS--DGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + P +VT+NIL+SGFCR A + +EM E+G P+ V++ LI F
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M ELG T +L+ G C +G++ +A L + P + Y
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C EG++ AL+++ E+ +K P+V + +IE L + RK EA L+EKM+ G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 396 ILPDS 400
I P +
Sbjct: 544 IDPST 548
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ F +MN+ F++M + + P+ IYN +I G+ K +AL M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ P+V ++ +I C+ +K A L +M + G +P+ + + R
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 199/431 (46%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + ++++ + D + + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D+ + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+ VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++DE+ KG P I TTLI+G + A ++M++E I D V + L+
Sbjct: 301 ANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C +G+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 139 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ML G+ PD T++ L+ LC + DA++L K L P+G+T+ L+ G+
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHC 258
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + +PDL TYN+ + GL
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENK 227
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 5/330 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
E + F VNA KA R+ + F+AM R L P++ YN+L++ F K + D ALG
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGLT---PNIPTYNLLMDAFRKVGQLDMALG 191
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M R +P VVT+NIL+ C + A LF +M GC+P+ +++TL+ G
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ +E + EM++ G V L+ L G + + +L+ + SR+G P F
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ L A EV + + G P +I+ LI+ R +A ++E+M
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM 371
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
++ G +P++ T+N L+ L G+ +A + T G PD +TY+ L+ +
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGEN 431
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L +M D+G PD +Y +DGL+
Sbjct: 432 QRAARLFQQMKDKGVEPDTLSYAVRIDGLA 461
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 1/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F ++ +++ + F M K+ P Y L+N K +A F+D M
Sbjct: 103 YNVLIRYFGRSGQLDSAMEMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P++ T+N+L+ F + + D+ALGLF EM+ +G P+VV++N L+ +
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ ++M GC S T LV+GL GRV +A ++ + RGV +Y L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L GN +++ E+ +KG P + T+++ L + K A + +M++ G
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +++N L++ G A ++ G P+ TY+ L+ + + E
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++ EM G PD+ TYN MD L ++ R R
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAAR 436
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 36/357 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A+ + N+ D F P+V + LI+ V EF++A Y ++V+
Sbjct: 37 ITAYGRGNKSGDAFDLFNQAESFA-CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC------------------------ 256
+ D +N+LI F R+ + D A+ +FREM+ KG
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 257 -----------NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
PN+ ++N L+ F + D + + EM G + S VT IL+D L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C+ GRV A +L + G P + Y LV L G A +V E+ +G +
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +L+ L + LM++M ++G PD+ +FN +++ L + A +
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G PD ++Y+IL+ Y R + ++ EM++ GFIP+ TYNS + L+
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLAT 392
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+ + R K A LF + C+P V +F LI +F+ + ++++ G
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C+ +L+ G++ A E+ + +G P ++ Y LV L G A
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
D + ++G P++ L++ R++ + A GL +M + G P VT+N LL+ L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C GR A +L + G PD TY LV+G + R +E + EM+D G DL
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 471 ATYNSYMDGLSNA 483
YNS + L+ A
Sbjct: 276 VNYNSLLATLAKA 288
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 13/367 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVK 166
D T+ F+V +L + R E S + + P + P ++ ++AF K
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP-------NIP----TYNLLMDAFRK 182
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++ L F M++ +PSV YN+L++ A + +M D PD
Sbjct: 183 VGQLDMALGLFAEMKRR-GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ L++G ++ + + A +FREM ++G ++V++N+L+ D + EM
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + + ++D L + A E+ G P Y L++ G+A
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++++E+ + G +P +LI L + EA ++E+M G PD VT+N L
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRL 421
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ L G A RL KG++PD ++Y + + G ++R E L +M G
Sbjct: 422 MDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGC 481
Query: 467 IPDLATY 473
D A Y
Sbjct: 482 PVDKAMY 488
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R D A + + ++++ P YN LI+ + D+A + M +PDVV
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVV 416
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N L+ + + A LF++M++KG P+ +S+ I G + + DE + + +M
Sbjct: 417 TYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Query: 287 IELGCEFSSVTCEILV 302
+GC IL+
Sbjct: 477 KAVGCPVDKAMYRILI 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP V YN L++ K E +A + +M V+PD +++ + I G + + D AL
Sbjct: 412 RPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALV 471
Query: 247 LFREMREKGCNPNVVSFNTLIRG 269
LF++M+ GC + + LIR
Sbjct: 472 LFKDMKAVGCPVDKAMYRILIRA 494
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 178/402 (44%), Gaps = 71/402 (17%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +NAF K + + F+ ++++ P+ +YN L+NG+VK RE D+A Y+ M
Sbjct: 339 FNTVINAFCKEGNVVEARKLFDGLKEM-GFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 397
Query: 217 VRDRVKPDVVTFNILISG-----------------------------------FCRNKKF 241
+ + PD +TFNIL+SG C +
Sbjct: 398 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 457
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D A+ +M EKG +P++++FN++I + D+ M+ G S TC L
Sbjct: 458 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 517
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GL GR+ +A EL+ +G+ + + L++K G+ A + E+ ++G
Sbjct: 518 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 577
Query: 362 LPSVIACTTLIEGLRR--------------LRKGV---------------------EASG 386
P V+A + I+GL + LRKG+ EA
Sbjct: 578 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 637
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L + M G+LPD T N ++ LC GR A + + GL PD +TY+ L++GY
Sbjct: 638 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 697
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +NLVN M G PDL TYN + G ++R+ R
Sbjct: 698 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNR 739
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 1/338 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C ++ +NA R +D L F M + P+V +N +IN F K
Sbjct: 295 FHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER-GCNPTVVTFNTVINAFCKEGNVV 353
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A +D + P+ + +N L++G+ + ++ D A L+ EMR+KG P+ ++FN L+
Sbjct: 354 EARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILV 413
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + ++G + ++ LG +I V GLC GR+ +A E ++D +G+
Sbjct: 414 SGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLS 473
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + ++ G A E + G PS C++L+ GL + EA+ L
Sbjct: 474 PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 533
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M+++G+ +++ F LL+ G V A L +G+ PD + + + G ++
Sbjct: 534 IGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSK 593
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +E N+ EML +G IP+ YNS + G K
Sbjct: 594 QGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 133/293 (45%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S+ + L+ FV +AL RM V+P IL R + LF++
Sbjct: 197 SVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKD 256
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
+ +G P +F+ +I GF + G ++ + M + CE ++ I+++ C GR
Sbjct: 257 VIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGR 316
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A RG P + ++ C EGN A ++ D L + G P+ I T
Sbjct: 317 TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 376
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ G ++R+ +A+ L E+M K+GI PD +TFN L+ GR D DRL S G
Sbjct: 377 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 436
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L PD + I VSG R E + +ML++G P + +NS + S A
Sbjct: 437 LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 489
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 11/279 (3%)
Query: 176 AFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++I+ SV+ + VL++ F K + A + M R + PDVV F+ I
Sbjct: 530 ATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFID 589
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + + A +F EM KG PN ++N+LI GF K +E + + M G
Sbjct: 590 GLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLP 649
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
T +++ GLC +GR+ A + +D + G+ P Y L+ C + A +V
Sbjct: 650 DIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLV 709
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-D 412
+ ++ G+ P + I G R+ A ++++++ GI+P++VT+N +L +C D
Sbjct: 710 NRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD 769
Query: 413 VGRTVDADRLRLLAS---TKGLDPDGMTYHILVSGYTRE 448
+ DR +L + P+ +T ++L+S + ++
Sbjct: 770 I-----LDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 35/223 (15%)
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
++L+R F + + + M E+G S+ IL L G +L D
Sbjct: 199 LDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVI 258
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
RRG P + + G++ C +G C L E L L
Sbjct: 259 RRGPQPCKYTFSGIILGFCRKG-----------------------CIHLGESLLHL---- 291
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
M K P++ +N ++ C GRT DA L +G +P +T++ ++
Sbjct: 292 --------MPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVI 343
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + +E E L + + + GF P+ YN+ M+G R+
Sbjct: 344 NAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMRE 386
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 219/475 (46%), Gaps = 23/475 (4%)
Query: 29 PSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHL--LTPTNNQITPSSLLHFLKSK-LHHH 85
PS P+ ++ T +L K L L P ++PS + SK L H
Sbjct: 4 PSTSHQGPIQEENLEQQLIQTITTILNATKPSLSALAPYAAHLSPSLISSIFASKALSSH 63
Query: 86 PQFTHYDFHIFAWAST-IDSFRHDHTTFLFIVRSLASS----YRFSELHSVL-NFISANP 139
P ++F WA + SF L + +L S Y FS+ S+L +FIS++
Sbjct: 64 PSVL---LNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDR 120
Query: 140 CPCSNDGIF----SCPE-MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
+ I PE + + ++ A+V+ ++ + F M++L + RP++ N
Sbjct: 121 QHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL-NYRPNLLTCN 179
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGFCRNKKFDLALGLFRE 250
L+N V+ L ++++D +K P+ +FNILI G+C K AL +
Sbjct: 180 TLMNSLVRYPSSSSIL-LARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNK 238
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E GC P+ VS+NT++ R E ++ +M G + T +LV G C G
Sbjct: 239 MSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGL 298
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A +++ +R +LP + Y LV C +G A + DE+ K LP V+ T
Sbjct: 299 LKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNT 358
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G + R E L+E+M K+G+ ++VT+N +L+ +C G +A G
Sbjct: 359 LIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENG 418
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L PD +TY+ L+ Y + + + +++EM +G D T N+ + L +K
Sbjct: 419 LSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKK 473
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ VN F ++++ + M K+ + P V YN LI+G + R+ + + M
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKM-NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ VK + VT+NI++ C+ A +M E G +P+ V++NTLI + K
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M EM G + + T ++ LC E ++ +A L+ S+RG + + Y L
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGIL 499
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ + AL + DE+ ++ +PS I ++I GL + RK +A + +ML+ G+
Sbjct: 500 ILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL 559
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD T+N ++ C G A + PD T +IL+ G RE ++
Sbjct: 560 VPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALK 619
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L N ++ +G D+ TYN+ + L
Sbjct: 620 LFNTLVSKGKDIDVVTYNTIISSL 643
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 3/314 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + K M + + M + +G P YN LI + K + KA D
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEE--NGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDE 448
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +K D T N ++ C KK D A L ++G + VS+ LI G+F + K
Sbjct: 449 MTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEK 508
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +N+ EM E S++T ++ GLC +V +A + + + G++P + Y
Sbjct: 509 GDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNI 568
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C EGN A + +E+ + P V C L+ GL R +A L ++ +G
Sbjct: 569 IIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
D VT+N ++ LC G+ +A L K L PD TY ++++ T R KE E
Sbjct: 629 KDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAE 688
Query: 456 NLVNEMLDEGFIPD 469
+M++ G + D
Sbjct: 689 EFTLKMVESGIVHD 702
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + + +++ D L M + P YN +++ +K R +A M
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEF-GCVPDTVSYNTILDALLKRRLLQEARDLLLDM 274
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ T+N+L+ G+CR A + M P V ++N L+ GF + K
Sbjct: 275 KSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKI 334
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR-VLKACELVIDFSRRGVLPKDFDYFG 335
DE + EM ++ VT L+DG C++ R + L+ + ++GV Y
Sbjct: 335 DEAFRIRDEMEKMNVLPDVVTYNTLIDG-CSQWRDSSEVYSLIEEMDKKGVKCNAVTYNI 393
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ +C +GN A +D++ + G P + TLI + K +A +M++M +G
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG 453
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D+ T N +L LC + +A L AS +G D ++Y IL+ GY ++ +
Sbjct: 454 LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRAL 513
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
NL +EM + +P TYNS + GL +RK
Sbjct: 514 NLWDEMKERQIMPSTITYNSVIGGLCQSRK 543
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 296 VTCEILVDGLC---NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+TC L++ L + +L A +++ D + GV+P + L+ C E AL+
Sbjct: 176 LTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDW 235
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
V+++ + G +P ++ T+++ L + R EA L+ M +G+ P+ T+N L+ C
Sbjct: 236 VNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCR 295
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+G +A ++ + + L P TY++LV+G+ + + E + +EM +PD+ T
Sbjct: 296 LGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVT 355
Query: 473 YNSYMDGLSNARKS 486
YN+ +DG S R S
Sbjct: 356 YNTLIDGCSQWRDS 369
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCRE--FDKALGFYDRMVRDRVKPDVVTFNIL 231
AF+ ++I+ +P V N+L+ G CRE +KAL ++ +V DVVT+N +
Sbjct: 582 AFQFHNEMIENLFKPDVYTCNILLRGL--CREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
IS C+ KF+ A L EM K P+ ++ +I + E +M+E G
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Query: 292 -----------------------EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+F S+ ++ LCN+ + A L ++ ++ GV
Sbjct: 700 VHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVAL 759
Query: 329 KDFDYFGLVEKL 340
+ Y L+E L
Sbjct: 760 NKYTYLNLMEGL 771
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 159/323 (49%), Gaps = 5/323 (1%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
K+ +++D A +R++I+ P +Y LI+GF K A +D M + R+
Sbjct: 55 LCKSGKVDD---AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRI 111
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PD + + +I G CR K A +F +M +G P+ V++ TLI G+ + ++ +
Sbjct: 112 VPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS 171
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ +M++ G + VT L DGLC G+V A EL+ + +G+ Y LV LC
Sbjct: 172 LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC 231
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
GN A+++++E+ G P I TTL++ + + V+A L+ +ML G+ P +
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TFN L+ C G D +RL KG+ P+ TY+ L+ Y N + + M
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351
Query: 462 LDEGFIPDLATYNSYMDGLSNAR 484
G +PD TYN + G AR
Sbjct: 352 CARGVMPDSNTYNILIKGHCKAR 374
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 141/291 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN +I K + D A M+ + PD V + LI GFC+ A
Sbjct: 42 KPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYK 101
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM ++ P+ +++ +I G K E + +M G E VT L+DG C
Sbjct: 102 LFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYC 161
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + KA L + G+ P Y L + LC G A E++ E+ KG ++
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNIC 221
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+L+ GL + +A LME+M G+ PD++TF L++ C G V A L
Sbjct: 222 TYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+GL P +T+++L++G+ ++GE L+ ML++G +P+ TYNS M
Sbjct: 282 LDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 135/266 (50%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDVV+++ +I+G+C + L L +EM+ KG PN+ ++N++I K D+ +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI G +V L+DG C G + A +L + ++ ++P Y ++ LC
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G A +V ++++ +G P + TTLI+G + + +A L +M++ G+ P+ VT
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L + LC +G+ A+ L KGL + TY+ LV+G + ++ L+ EM
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVR 488
G PD T+ + MD + V+
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVK 273
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 36/358 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ F K + F+ M K P Y +I G +C + +A +++
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFNK 140
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V+PD VT+ LI G+C++ + + A L +M + G PNVV++ L G +
Sbjct: 141 MFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ 200
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +EM G + + T LV+GLC G + +A +L+ + G+ P +
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---------RRLRKGVEASG 386
L++ C G A E++ E+ +G P+VI L+ G RL + G
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Query: 387 LM--------------------------EKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+M + M G++PDS T+N L++ C +A
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW 380
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L + KG + +Y+ ++ G+ ++ + E L EM EG D YN ++D
Sbjct: 381 FLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVD 438
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+ +G P+VVS++T+I G+ + + + + EM G + + T ++ LC G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V A ++ + +G++P Y L++ C GN A ++ DE+ K+ +P IA T
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+I GL R K +EA + KM G+ PD VT+ L++ C G A L G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL---SNARKSV 487
L P+ +TY L G + + L++EM +G ++ TYNS ++GL N R++V
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 488 R 488
+
Sbjct: 241 K 241
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 166/373 (44%), Gaps = 40/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F NR+N AF + K++ +P + + LI G +
Sbjct: 103 FGIPHNVYTLNVLINSFCHLNRVN---FAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+M+ + +PDVV + LI+G C+ A+ L R M + C P+VV + T
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV----------------------- 302
LI +R+ + N+ EMI G + VTC LV
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 303 ------------DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
D LC EG V +A ++V + GV P Y L++ C A+
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + KG P+V + TLI G ++ + +A L E+M ++ ++P++VT+N L+ L
Sbjct: 340 KVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR DA L G PD +TY IL+ + + L+ + PD+
Sbjct: 400 CHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDI 459
Query: 471 ATYNSYMDGLSNA 483
Y +DG+ A
Sbjct: 460 QIYTIVIDGMCRA 472
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 151/316 (47%), Gaps = 1/316 (0%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
++ N ++D L +F M + PS+ + ++ K + + L +M +
Sbjct: 49 YLHFNTLDDALSSFNRMLHM-HPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPH 107
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+V T N+LI+ FC + + A + ++ + GC P+ SF TLI+G E + E +++
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+MI G + V L++GLC G A L+ + P Y L+ LC +
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
A + E+ KG P+++ C +L+ L L + + L+ +M+ I+P++++
Sbjct: 228 RQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
+++ LC G A + + G++PD +TY L+ G+ + E + + M+
Sbjct: 288 TTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVH 347
Query: 464 EGFIPDLATYNSYMDG 479
+G P++ +YN+ ++G
Sbjct: 348 KGCAPNVFSYNTLING 363
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+ +++D + P+ +++ K +A D M + V+PDVVT+ LI G C
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A+ +F M KGC PNV S+NTLI G+ + D+ + + EM ++VT
Sbjct: 332 RSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVT 391
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ GR+ A L + G +P Y L++ LC + A+ ++ +
Sbjct: 392 YNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIE 451
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + T +I+G+ R + +A L + +G+ P+ T+N + LC G
Sbjct: 452 GSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLD 511
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L + DG TY+ + G+ R N L+ EML GF D++T +
Sbjct: 512 EATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLV 571
Query: 478 DGLSN 482
LS+
Sbjct: 572 GMLSD 576
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 149/375 (39%), Gaps = 70/375 (18%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V IY LING K A+ M + +PDVV + LI C++++ A
Sbjct: 176 QPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFN 235
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG +PN+V+ N+L+ ++ + EM++ ++++ +VD LC
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG V +A ++V + GV P Y L++ C A++V D + KG P+V
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355
Query: 367 ACTTLIEG---LRRLRKGV--------------------------------EASGLMEKM 391
+ TLI G + R+ K + +A L +M
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415
Query: 392 LKEGILPDSVTFNCLLEDLCD-----------------------------------VGRT 416
+ G +PD VT+ LL+ LC G
Sbjct: 416 VACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGEL 475
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
DA L S+KGL P+ TY+I+ G + E L EM + D TYN+
Sbjct: 476 EDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTI 535
Query: 477 MDGLSNARKSVRQTR 491
G ++ R +
Sbjct: 536 TQGFLRNNETSRAIQ 550
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%)
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
S + D AL F M P++V F ++ +++ ++++ +M G
Sbjct: 47 SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T +L++ C+ RV A ++ + G P + L++ LC EG G AL +
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
D++ +G P V+ TLI GL + A L+ M K PD V + L+ LC
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L TKG+ P+ +T + LV K L+NEM+D +P+ +
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286
Query: 473 YNSYMDGL 480
+ +D L
Sbjct: 287 LTTVVDAL 294
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 179 AMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
A+ K I+G P + IY ++I+G + E + A + + +KP+V T+NI+ G
Sbjct: 445 ALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEF 293
C+ D A LF EM E C+ + ++NT+ +GF + + + EM+ G C+
Sbjct: 505 CKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDV 564
Query: 294 SSVTCEILVDGLCNEG 309
S+ T +LV L ++G
Sbjct: 565 STTT--LLVGMLSDDG 578
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%)
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+V LI L + A ++ K+LK G PD+ +F L++ LC G+ +A L
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G PD + Y L++G + L+ M PD+ Y + + L
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227
Query: 484 RKSVR 488
R+ +
Sbjct: 228 RQQTQ 232
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 7/335 (2%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDK 208
C R F F ++ K+ R+ D L F+AM + +G PSV YN +I G+ K +
Sbjct: 169 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ--NGVVPSVMTYNAMIVGYSKLGRMND 226
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL + M ++ PD T+N LI G C ++K + A L ++G P VV+F LI
Sbjct: 227 ALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLIN 285
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ KFD+ + M +M+ C+ L++ L + R+ +A EL+ + S G++P
Sbjct: 286 GYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVP 345
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y +++ C G IALEV+ + + G P+ +L+ GL + +K +A L+
Sbjct: 346 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 405
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
KM K+GI+P+ +T+ LL+ CD +A RL + GL PD Y +L +
Sbjct: 406 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 465
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R +E + + + +G Y + +DG S A
Sbjct: 466 GRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKA 497
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D F ++ SL R E +LN ISAN
Sbjct: 311 DLQVFGKLINSLIKKDRLKEAKELLNEISAN----------------------------- 341
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
GL+ P+V Y +I+G+ K + D AL M RD +P+ T
Sbjct: 342 -----GLV------------PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWT 384
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N L+ G ++KK A+ L +M++ G PNV+++ TL++G E FD + +EM+
Sbjct: 385 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRL-FEMM 443
Query: 288 EL-GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
E G + +L D LC GR +A ++ R+GV Y L++ GN
Sbjct: 444 EQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNT 500
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A +++ + +G P + L+ L + ++ EA ++++M GI + L
Sbjct: 501 DFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTIL 560
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++++ G+ A R+ ++ G P TY + ++ Y +E R ++ E+L+ +M EG
Sbjct: 561 IDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGV 620
Query: 467 IPDLATYNSYMDG 479
PD+ TYN +DG
Sbjct: 621 APDVVTYNILIDG 633
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 38/347 (10%)
Query: 176 AFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +A+R+ R ++S YN + + + Y ++V+D + PD VT+N +I
Sbjct: 17 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+C+ A FR + E G P + N L+ G+ + + + M +GC+
Sbjct: 77 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 136
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ + IL+ GLC+ V KA L + R G P + L+ LC G G A +
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D + + G +PSV+ +I G +L + +A + E M K G PD T+N L+ LCD
Sbjct: 197 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD- 255
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYT--------------------------- 446
+T +A+ L A +G P +T+ L++GY
Sbjct: 256 QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVF 315
Query: 447 --------RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+++R KE + L+NE+ G +P++ TY S +DG + K
Sbjct: 316 GKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 362
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 32/351 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI----YNVLINGFVKCREFDKA 209
E + +A KA R A EA ++ R V++ Y LI+GF K D A
Sbjct: 452 EHAYAVLTDALCKAGR------AEEAYSFIV--RKGVALTKVYYTTLIDGFSKAGNTDFA 503
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+RM+ + PD T+++L+ C+ K+ + AL + +M +G + ++ LI
Sbjct: 504 ATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDE 563
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E K D M EM G + S+ T + ++ C EGR+ A +L++ R GV P
Sbjct: 564 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPD 623
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDEL---------WK---------KGNLPSVIACTTL 371
Y L++ G A + + W KGNL V + T
Sbjct: 624 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT- 682
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G+ L + L+E+M+K G+ P T++ L+ C GR +A L KGL
Sbjct: 683 -SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGL 741
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
P+ Y +L+ ++ + V+ M + GF P L +Y + GL N
Sbjct: 742 SPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 792
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 27/323 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ +L R +E +L+ +S C+ IF+ + ++ ++
Sbjct: 518 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT---IFA-------YTILIDEMLRE 567
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + + M +PS + Y V IN + K + A +M R+ V PDVVT
Sbjct: 568 GKHDHAKRMYNEMTS-SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 626
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR----------------GFF 271
+NILI G D A + M C PN ++ L++ G +
Sbjct: 627 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 686
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ D + M++ G + T L+ G C GR+ +AC L+ +G+ P +
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 746
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C AL V + + G P + + L+ GL + L +
Sbjct: 747 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 806
Query: 392 LKEGILPDSVTFNCLLEDLCDVG 414
L+ G D V + L + L G
Sbjct: 807 LELGYNHDEVAWKILNDGLLKAG 829
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V+ Y+ LI GF K ++A D M + P+ + +LI C K F+ AL
Sbjct: 708 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSF 767
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M E G P + S+ L+ G E F++ ++ +++ELG V +IL DGL
Sbjct: 768 VSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLK 827
Query: 308 EGRV 311
G V
Sbjct: 828 AGYV 831
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+ +V +G E D +RMV+ + P V T++ LI+GFC+ + + A L M
Sbjct: 677 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 736
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
KG +PN + LI+ + F++ ++ M E G + + +LV GLCNEG
Sbjct: 737 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 796
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
K L D G + + L + L G I +++ + K+
Sbjct: 797 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y +ING K E A G + +M +PDVVT++ +I C++++ + AL
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M+ KG +PN+ ++N+LI+G ++ E M EM+ L + VT +L++ C
Sbjct: 67 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG V +A ++ + GV P Y L+ + A ++ D + KG P V
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ LI G + ++ EA L +M+ +G+ PD V++N L++ LC +GR +A L
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
T G PD TY IL+ G+ ++ + L M P++ YN +D + +R
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 304
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 137/265 (51%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +PDV T+ +I+G C+ + A GLF++M E GC P+VV+++T+I +R+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E +++ M G + T L+ GLCN R +A ++ + ++P +
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C EGN A V+ + + G P+V+ ++L+ G + EA L + M+ +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD ++N L+ C R +A +L +GL PD ++Y+ L+ G + R +E
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+L ML G +PDL TY+ +DG
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGF 265
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 138/287 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y+ +I+ K R ++AL + M + P++ T+N LI G C ++ A
Sbjct: 42 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 101
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ EM PN+V+F+ LI F E E + M E+G E + VT L++G
Sbjct: 102 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 161
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ V +A +L +G P F Y L+ C G A ++ +E+ +G P ++
Sbjct: 162 LQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 221
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI+GL +L + EA L + ML G LPD T++ LL+ C G A RL
Sbjct: 222 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ L P+ + Y+IL+ + KE L +E+ +G P++ +
Sbjct: 282 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 155/317 (48%), Gaps = 14/317 (4%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
A N F K NR+ GL+ P+ Y+VL+NGF K + Y+ M R
Sbjct: 211 LAKNLFCKMNRL--GLV------------PNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+ +N LIS +C + D A +F EMREKG V+++N LI G +KF E
Sbjct: 257 SGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V + +++ ++G + VT IL++G C+ ++ A L G+ P Y L+
Sbjct: 317 AVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIA 376
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
N AL++V E+ ++ PS + T LI+ RL +A + M K G++P
Sbjct: 377 GYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVP 436
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T++ LL LC G +A +L L P+ + Y+ ++ GY +E L+
Sbjct: 437 DVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLL 496
Query: 459 NEMLDEGFIPDLATYNS 475
NEM+ G +P++A++ S
Sbjct: 497 NEMVQSGMVPNVASFCS 513
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N F K +G +E M++ G P+ YN LI+ + DKA +
Sbjct: 231 YSVLMNGFFKQGLQREGFQMYENMKR--SGIVPNAYAYNCLISEYCNDGMVDKAFKVFAE 288
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + V+T+NILI G CR KKF A+ L ++ + G +PN+V++N LI GF RK
Sbjct: 289 MREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRK 348
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D V + ++ G + VT L+ G + A +LV + R + P Y
Sbjct: 349 MDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTI 408
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ + A E+ + K G +P V + L+ GL EAS L + + +
Sbjct: 409 LIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH 468
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+SV +N ++ C G + A RL G+ P+ ++ + R+ + KE E
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAE 528
Query: 456 NLVNEMLDEGFIPDLATY 473
L+ +M++ G P ++ Y
Sbjct: 529 LLLGQMINSGLKPSVSLY 546
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 184/424 (43%), Gaps = 45/424 (10%)
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS-----NDGIFS-CPE 152
+T +H + FI+ L SS + S++ + + P S F+ C
Sbjct: 28 TATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTPCST 87
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALG 211
++ VNA+V ++ + L M + +G P + +N L+ ++ FDKA
Sbjct: 88 YTPLYDTVVNAYVHSHSTDQALTFLHHM--IHEGHVPLSNTFNNLLCLLIRSNYFDKAWW 145
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ + + +V D +F I+I G C F L + E G +PNVV + TLI G
Sbjct: 146 IFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCC 204
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ N+ +M LG + T +L++G +G + ++ + R G++P +
Sbjct: 205 KDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ + C +G A +V E+ +KG V+ LI GL R +K EA L+ K+
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
K G+ P+ VT+N L+ CDV + A RL + GL P +TY+ L++GY++
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384
Query: 452 KEGENLVNEMLD-----------------------------------EGFIPDLATYNSY 476
+LV EM + G +PD+ TY+
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVL 444
Query: 477 MDGL 480
+ GL
Sbjct: 445 LHGL 448
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 34/324 (10%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+Y+ ++N +V D+AL F M+ + P TFN L+ R+ FD A +F E+
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150
Query: 252 REK----------------------------------GCNPNVVSFNTLIRGFFGERKFD 277
+ K G +PNVV + TLI G +
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
N+ +M LG + T +L++G +G + ++ + R G++P + Y L+
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C +G A +V E+ +KG V+ LI GL R +K EA L+ K+ K G+
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VT+N L+ CDV + A RL + GL P +TY+ L++GY++ +L
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 458 VNEMLDEGFIPDLATYNSYMDGLS 481
V EM + P TY +D +
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFA 414
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
AM + P+V IY LI+G K A + +M R + P+ T+++L++GF +
Sbjct: 182 AMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQ 241
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
++ M+ G PN ++N LI + + D+ + EM E G +T
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTY 301
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL+ GLC + +A +LV ++ G+ P Y L+ C A+ + ++L
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKS 361
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+++ TLI G ++ A L+++M + I P VT+ L++ + T
Sbjct: 362 SGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEK 421
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + L GL PD TY +L+ G KE L + + P+ YN+ +
Sbjct: 422 ACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIH 481
Query: 479 GLSNARKSVRQTR 491
G S R R
Sbjct: 482 GYCKEGSSYRALR 494
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 168/324 (51%), Gaps = 9/324 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ KA R ++ E M + G P + Y LI GF K ++ D AL +++
Sbjct: 57 YNSLISGLCKAERASEAYDLLEEM--VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 114
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGER 274
+V +PDVVT++ LI G C+ + A+ LF M + G C PN V++N+LI GF
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 174
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K DE +N+ M E G VT L++G C R+ A +L+ +R+G+ P +
Sbjct: 175 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFT 234
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM-EKMLK 393
L++ LC E A+ ++ E+ +K P+V T+++G R+ + EA M E+M
Sbjct: 235 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM-- 292
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
P+ V+FN ++ LC V R+ +A L A + +PD + Y ++ RE + E
Sbjct: 293 -DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDE 351
Query: 454 GENLVNEMLDE-GFIPDLATYNSY 476
+ +ML+E G +P+ TY+++
Sbjct: 352 ACRVYRKMLEEPGCLPNSITYSTF 375
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 3/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN LI+G K +A + MV PD+ T+ LI+GFC++KK D AL +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLC 306
F ++ +G P+VV+++ LI G E + E +++ MI+ G C ++VT L+ G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ +A L+ + G P Y L+ C A ++++++ +KG P+V+
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+L++GL R + +A ++ +M ++ P T+N +L+ C V + +A + L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFML-- 289
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ ++++I++ G + NR E LV E PD+ Y + +D L +K
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P VT+N LISG C+ ++ A L EM GC P++ ++ TLI GF +K D+ + +
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLC 341
+++ G VT L+DGLC EGR+ +A +L + G +P Y L+ C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A+ +++ + + G+ P V+ TTL+ G +L + +A L+ +M ++G+ P+ V
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ LC R DA + K P TY+ ++ GY R N+ +E + E
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291
Query: 462 LDEGFIPDLATYNSYMDGLSNARKS 486
+D P++ ++N + GL +S
Sbjct: 292 MD--CPPNVVSFNIMIRGLCKVNRS 314
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+P Y L+ LC A A ++++E+ G +P + TTLI G + +K +A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSG 444
+ E+++ G PD VT++CL++ LC GR +A L R++ S + P+ +TY+ L+SG
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCM-PNTVTYNSLISG 169
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + E NL+ M + G PD+ TY + M+G
Sbjct: 170 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G G A++ +E+ P+ + +LI GL + + EA L+E+M+ G +PD
Sbjct: 37 GRRGCGAAVQDAEEV------PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF 90
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+ L+ C ++ DA R+ +G PD +TY L+ G +E R KE +L M
Sbjct: 91 TYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 150
Query: 462 LDEG-FIPDLATYNSYMDGLSNARK 485
+ G +P+ TYNS + G K
Sbjct: 151 IKSGSCMPNTVTYNSLISGFCRMGK 175
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DGR-PSVSIYNVLINGFVKCREF 206
CP ++ ++A K + + A + ++K+I DG P V YN +++G K
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEE---ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
++AL ++ M R P+ + N +I G C+ K D A +F EM K P+ S+ L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G K +E + M++ G S+VT +++ G+C + +A EL +G
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F + L++ C G A ++ + G++P V+ +TLI GL + + +A
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E M+K P VT N L+ LC GR +A + + G PD +TY+ LV G+
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R + + L+++M+ G P++ TY + + GL A +
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 161/381 (42%), Gaps = 11/381 (2%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L S R E + N + C R + + +
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMER----------LGCTPNRRSHNTIILGLCQQ 163
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++++ F M + D P Y +LI+G K + ++A + RM+ + P VT
Sbjct: 164 SKIDQACQVFHEM-EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N++I G C D AL LF+ MR KGC P+ +FN LI K DE + M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G VT L+ GLC+ RV A L+ D +R P L+ LC G
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A EV+D + G P V+ TL+ G R + A L+ M+ G+ P+ VT+ L+
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC R +A + + G P+ TY L+ G+ + G L EM+ G
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 462
Query: 468 PDLATYNSYMDGLSNARKSVR 488
PD Y + L + +S R
Sbjct: 463 PDHVVYGTLAAELCKSGRSAR 483
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 4/297 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y +LI+G K + + A + +++ V P V + LI G C FD A L
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M +GC P+ V++N +I +E ++ +MIE G VT ++DGLC
Sbjct: 68 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A L + R G P + ++ LC + A +V E+ K P +
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+GL + K EA L ++ML GI P +VT+N ++ +C + T+D + L L S
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMC-LAYTLD-EALELFKS 245
Query: 428 --TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+KG P T++IL+ + + + E L+ M D+G +PD+ TY++ + GL +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 4/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ KA ++ND F+ + L G PS Y LI+G FD A +
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 70
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R P VT+N++I C+ + A L ++M E G P+VV++NT++ G +
Sbjct: 71 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 130
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + + EM LGC + + ++ GLC + ++ +AC++ + + + P + Y
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ L G A ++ + G PS + +I G+ EA L + M +G
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P TFN L++ C G+ +A RL + G PD +TY L+SG R +
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+L+ +M+ P + T N+ + GL A + +++ R
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGR-IKEAR 345
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 143/330 (43%), Gaps = 5/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ A +++ L F++MR RPS +N+LI+ K + D+A RM
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSK-GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM 281
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D PDVVT++ LISG C + D A L +M ++ C P VV+ NTLI G +
Sbjct: 282 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + M+ G VT LV G C G+ +A EL+ D RG+ P Y L
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V LC A V ++ G P++ T LI G + L +M+ GI
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM---TYHILVSGYTRENRRKE 453
PD V + L +LC GR+ A + L + L + Y V G + +
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEI-LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEM 520
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
V +M+ G +P S + GL +
Sbjct: 521 ALGFVRDMVRGGQLPAPERCASLVAGLCKS 550
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E+ +P+ S+ LI G K ++ N+ +++ G S+V L+ GLC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A EL D +RRG P Y +++ C G A +++ ++ + G++P V+ T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+++GL + + EA L +M + G P+ + N ++ LC + A ++ K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ PD +Y IL+ G + + E L MLD G P TYN + G+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 15/267 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ R++D E M K +P+V N LI+G K +A D MV
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKR-QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDVVT+N L+ G CR + + A L +M +G PNVV++ L+ G + E
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M GC + T L+ G C+ G+V +L + G+ P Y L +L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 341 CGEGNAGIALEVV--------DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
C G + ALE++ E W G+ A ++GL K A G + M+
Sbjct: 476 CKSGRSARALEILREGRESLRSEAW--GDEVYRFA----VDGLLEAGKMEMALGFVRDMV 529
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ G LP L+ LC G+ +A
Sbjct: 530 RGGQLPAPERCASLVAGLCKSGQGGEA 556
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ KA R+ + +AM + G+ P V YN L++G + + ++A MV
Sbjct: 332 IHGLCKAGRIKEAREVLDAM--VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+VVT+ L+SG C+ + A G+F +M+ GC PN+ ++ LI GF + D G
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449
Query: 280 VNMAYEMIELG---------------CEF--SSVTCEIL--------------------V 302
+ + EM+ G C+ S+ EIL V
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 509
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
DGL G++ A V D R G LP LV LC G G A V++E+
Sbjct: 510 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%)
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+ R V P + Y L++ L G A + +L G PS +A T+LI GL
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L M + G P VT+N +++ C G +A L G PD +TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ G + +R +E L NEM G P+ ++N+ + GL K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 165
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 170/329 (51%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A K N+ D +++F +++ ++ YN+LIN F +C AL +M
Sbjct: 81 FSKLLSAIAKMNKF-DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +PD+VT N L++GFC + A+ L +M E G P+ V+F TLI G F K
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + M++ GC+ VT +V+GLC G A L+ + Y +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC + AL + E+ KG P+VI ++LI L + +AS L+ M++ I
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VTF+ L++ G+ V A++L + +DP+ TY L++G+ +R E +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ M+ + +P++ TYN+ ++G A++
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR++D + + M ++ +P + LI+G + +A+ DRMV+
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +++G C+ DLAL L +M NVV ++T+I R D+ +
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + +T L+ LCN GR A L+ D R + P + L++
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+G A ++ +E+ K+ P++ ++LI G L + EA ++E M+++ LP+
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ C R L S +GL + +TY L+ G+ + + + +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ G P++ TYN +DGL
Sbjct: 454 MVSVGVHPNILTYNILLDGL 473
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 1/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + +R++ L M KL P + N L+NGF A+ D+M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD VTF LI G + K A+ L M ++GC P++V++ ++ G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M E + V ++D LC A L + +GV P Y L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+++ + LI+ + K V+A L E+M+K I
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ T++ L+ C + R +A ++ L K P+ +TY+ L++G+ + R +G
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM G + + TY + + G AR
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K +FD + F ++M + ++ T+NILI+ FCR + LAL L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + + V + +M+E+G + +VT L+ GL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ +RG P Y +V LC G+ +AL +++++ +V+
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+T+I+ L + R +A L +M +G+ P+ +T++ L+ LC+ GR DA RL
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++P+ +T+ L+ + ++ + + E L EM+ P++ TY+S ++G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 15/352 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
++ D TF ++ L + SE ++++ + C P++ + VN
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ---------PDLV-TYGAVVNGL 228
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K D LA + K+ + +V IY+ +I+ K R D AL + M V+
Sbjct: 229 CKRG---DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+V+T++ LIS C ++ A L +M E+ NPN+V+F+ LI F + K + +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI+ + + T L++G C R+ +A +++ R+ LP Y L+ C
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ E+ ++G + + + TTLI G + R A + ++M+ G+ P+ +T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+N LL+ LC G+ A + ++PD TY+I++ G + + K G
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 161/330 (48%), Gaps = 3/330 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKA 209
P R F+ + +++ ++ F+ M R+ + +P+V +N L++G K + + A
Sbjct: 111 PPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGV--QPTVVTFNTLMSGMCKASDLNNA 168
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M + + PDV T+ I G C+ + A+ +F EM E+G NPN V TLI
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E G+ + +EM G + V LV+G C + A ++V + + G+ P
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 288
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ C EG A+E+ E+ +G + T LI GL + + V+A ++
Sbjct: 289 KVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILC 348
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M++ G+ PD+ T+ +++ C G + KG +P +TY+++++G+
Sbjct: 349 EMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLG 408
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ K + L+N ML+ G P+ TYN +DG
Sbjct: 409 QMKNADMLLNAMLNIGVCPNDITYNILLDG 438
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A FY ++ V P+ FN+L+ R+ K A +F EM +G P VV+FNTL+
Sbjct: 97 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 156
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + M + G T + GLC GR+ A E+ + RG+
Sbjct: 157 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 216
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P L++ C EG+ LE+ E+ +G ++A L+ G R+R A+ +
Sbjct: 217 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDI 276
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E+M K+G+ PD VT+ L++ C G A ++ S +G+ D +TY L+SG ++
Sbjct: 277 VEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSK 336
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R + E ++ EM++ G PD TY +D
Sbjct: 337 AGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 368
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 138/296 (46%), Gaps = 12/296 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR--M 216
+ K R+ D + FE M R L P+ + LI+ C+E D G R M
Sbjct: 191 IQGLCKTGRIQDAMEMFEEMCERGL---NPNTVVLTTLIDAH--CKEGDVTAGLELRWEM 245
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VK D+V +N L++GFCR + A + EMR+ G P+ V++ TLI G E +
Sbjct: 246 ATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGEL 305
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + M EM + G VT L+ GL GR + A ++ + G+ P + Y +
Sbjct: 306 DTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMV 365
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G+ + + E+ KG P ++ ++ G L + A L+ ML G+
Sbjct: 366 IDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGV 425
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
P+ +T+N LL+ C G+ D + L+ S KG+ D Y L++ + ++ K
Sbjct: 426 CPNDITYNILLDGHCKHGKVRDTEELK---SAKGMVSDFGVYTSLINEFVKKKSAK 478
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + + + G P FN L+R K N+ EM+ G + + VT L+
Sbjct: 98 AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMS 157
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G+C + A L ++ G+ P + Y ++ LC G A+E+ +E+ ++G P
Sbjct: 158 GMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNP 217
Query: 364 SVIACTTLIEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+ + TTLI+ ++G +G L +M G+ D V +N L+ C V A+
Sbjct: 218 NTVVLTTLIDA--HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAND 275
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ GL PD +TY L+ G +E + EM DEG D TY + + GLS
Sbjct: 276 IVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLS 335
Query: 482 NARKSVRQTR 491
A +SV R
Sbjct: 336 KAGRSVDAER 345
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 9/385 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH ++ ++ L++ R E S++ + + S +F+ + I+
Sbjct: 8 TFRHTLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ + D + F RK P + VL +K + F GFY
Sbjct: 68 VFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYKE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC+ + LA +F + + G P+VVSFNTLI G+
Sbjct: 127 ILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+G + M G T +L++GLC E ++ +A EL + +G++P +
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +ALE+ ++ ++G P +I TLI GL R +A L+ +M +G
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ L++ C G A LR + + D + Y L+SG +E R + E
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAE 366
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
++ EML G P+ TY ++G
Sbjct: 367 KMLREMLSVGLKPENGTYTMIINGF 391
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 3/278 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + F+A+ K RPSV +N LING+++
Sbjct: 127 ILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITK-CGLRPSVVSFNTLINGYIRLG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ DK M V PDV T +LI+G C+ K D A LF EM +KG PN V+F
Sbjct: 186 DLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G + D + + +M+ G +T L+ GLC +G + +A +L+++ S +
Sbjct: 246 TLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ A E+ + ++ +A T LI GL + + V+A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDA 365
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
++ +ML G+ P++ T+ ++ C G A +L
Sbjct: 366 EKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKL 403
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 1/246 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N +++ ++ G AM P V VLING K + D+A ++ M
Sbjct: 174 FNTLINGYIRLGDLDKGFRLKTAMHA-SGVHPDVYTNTVLINGLCKESKMDEANELFNEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTF LI G C++ + DLAL ++++M +G +P+++++NTLI G +
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDL 292
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ ++ EM G + +T L+DG C EG + A EL + D Y L
Sbjct: 293 KQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTAL 352
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC EG A A +++ E+ G P T +I G + AS L+++M ++G
Sbjct: 353 ISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGH 412
Query: 397 LPDSVT 402
+P VT
Sbjct: 413 VPCVVT 418
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 201/413 (48%), Gaps = 33/413 (7%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASS---YRFSELHSVLNFISANPCPCSNDGIFS 149
F WA D ++HD ++ ++ L S +R +++ L +P +
Sbjct: 11 IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVT------ 64
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
F + KA + L A+ + P V I+N LI+G K D+A
Sbjct: 65 -------FKILIRGNCKAGQATRALEFLRALDEF-SVAPDVYIFNFLIHGLFKDGNPDQA 116
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVSFNTLI 267
+ ++ M RV PD+ T+N +ISG C++ + A L EM +G P++V++NTLI
Sbjct: 117 VKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLI 176
Query: 268 R-GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
G + +E + + M G +T ++ LC GRV++A E++ S
Sbjct: 177 NAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---C 233
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + L++ C G ALEV++E+ ++ LP VI T L+ GL R+ + A
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-------RLLASTKGLD--PDGMT 437
L+E+++++G +PD + + L++ LC G +A +L +LA ++ P T
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
Y+I++ G ++ + +L+++++ G++PD+ TYN+ +DGL A + VR+
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR-VREA 405
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 9/300 (3%)
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
K + P + +N L++GF K +AL + M R+ + PDV+T+ IL++G CR +
Sbjct: 229 KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV 288
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI--ELGCEFSSV--- 296
+A L E+ +G P+V+++ +L+ G + +E + EM E+ E S+
Sbjct: 289 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMV 348
Query: 297 ----TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
T I++ GL +G + KA L+ D RG +P Y L++ LC A ++
Sbjct: 349 PPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
DE+ G P+ + +++ GL R+ + +A L+ +M ++ P+ V + L++ LC
Sbjct: 409 ADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 468
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R DA + +G+ D Y L+ R E + +EM+ GF+PD +T
Sbjct: 469 SDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 25/344 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+ +L + R E +L +S CS D + F+ ++ F KA
Sbjct: 204 DVITYNSIIHALCVAGRVVEAAEILKTMS-----CSPDLV--------TFNTLLDGFCKA 250
Query: 168 NRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ L E M R+ I P V Y +L+NG + + A + +VR PDV+
Sbjct: 251 GMLPRALEVLEEMCRENI--LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 308
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS---------FNTLIRGFFGERKFD 277
+ L+ G C++ + + A L +EM + +VS +N ++ G +
Sbjct: 309 AYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 368
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ V++ +++ G VT L+DGLC RV +AC+L + + G P D +V
Sbjct: 369 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVV 428
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC G A +V E+ +K + P+V+ T+LI+GL + + +A +++ M +G+
Sbjct: 429 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVA 488
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
D + L+ + GR +A + +G PDG T L
Sbjct: 489 LDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 44/284 (15%)
Query: 237 RNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGE-RKFDEGVNMAYEMIELGCEFS 294
R+ + DLA+ F E+ G +V S+N L+ +F G + +++ GC +
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTG-KVYKDLLHSGCSPN 61
Query: 295 SVTCEILVDGLCNEGRVLKACEL--------------VIDFSRRGVL------------- 327
VT +IL+ G C G+ +A E + +F G+
Sbjct: 62 LVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121
Query: 328 --------PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG--NLPSVIACTTLIE-GLR 376
P F Y ++ LC GN A E+++E+ ++G + P ++ TLI G+
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ EA +++ M G PD +T+N ++ LC GR V+A + T PD +
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE---ILKTMSCSPDLV 238
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
T++ L+ G+ + ++ EM E +PD+ TY ++GL
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 163/359 (45%), Gaps = 37/359 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + K R++D + FE M+ + P V YN LIN F K + K L FY M
Sbjct: 171 YNSMIDGYGKVGRLDDTVYFFEEMKSM-SCEPDVITYNSLINCFCKSGKLPKGLEFYREM 229
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +KP+VV+++ L+ FC+ A+ + +MR G PN ++ +L+
Sbjct: 230 KQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNL 289
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +A EM+E+G E++ VT L+DGLC+ R+ +A +L GV+P Y L
Sbjct: 290 SDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNAL 349
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N ALE+++EL +G P ++ T I GL L K A +M +M + GI
Sbjct: 350 IHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409
Query: 397 LPDS-----------------------------------VTFNCLLEDLCDVGRTVDA-D 420
++ VTF L++ LC A D
Sbjct: 410 KANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAID 469
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+++ GL P+ Y ++ G +EN+ K L +M EG +PD Y S MDG
Sbjct: 470 YFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 147/298 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P N L++ F K + D F+ M+ KP V T+NI+I + + A GL
Sbjct: 96 PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM+ +G P+ V++N++I G+ + D+ V EM + CE +T L++ C
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ K E + + G+ P Y LV+ C E A++ ++ + G++P+
Sbjct: 216 SGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFT 275
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L++ ++ +A L +ML+ G+ + VT+ L++ LCD R +A++L
Sbjct: 276 YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
T G+ P+ +Y+ L+ G+ + L+NE+ G PDL Y +++ GL K
Sbjct: 336 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 37/310 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ A RM + F M + G P+++ YN LI+GFVK + D+AL + +
Sbjct: 315 IDGLCDAERMKEAEKLFGKM--VTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++PD++ + I G C +K + A + EM+E G N + + TL+ +F EG
Sbjct: 373 GIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEG 432
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+++ EM EL E + VT +L+DGLC V KA DYFG +
Sbjct: 433 LHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKA----------------IDYFGRMSN 476
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
G P+ T +I+GL + + A+ L E+M +EG++PD
Sbjct: 477 ------------------DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPD 518
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ L++ G ++A LR + G+ D + Y LV G+++ N+ ++ + +
Sbjct: 519 RTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLE 578
Query: 460 EMLDEGFIPD 469
EM+ E +PD
Sbjct: 579 EMIGEEILPD 588
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++A+ K+ +GL E M++L D +V + VLI+G K + KA+ ++ R
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEEMQEL-DHEVTVVTFCVLIDGLCKNKLVSKAIDYFGR 473
Query: 216 MVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M D ++P+ + +I G C+ + A LF +M ++G P+ ++ +L+ G +
Sbjct: 474 MSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQG 533
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + + +M E+G + + LV G ++ KA + + +LP +
Sbjct: 534 NMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCI 593
Query: 335 GLVEK 339
G+++K
Sbjct: 594 GVLKK 598
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 145/288 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+VL+NGF K + Y+ M R + P+ +N LIS +C D A +
Sbjct: 226 PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKV 285
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EMREKG V+++N LI G +KF E V + +++ ++G + VT IL++G C+
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A L G+ P Y L+ N AL++V E+ ++ PS +
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ RL +A + M K G++PD T++ L+ LC G +A +L
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
L P+ + Y+ ++ GY +E L+NEM+ G +P++A++ S
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCS 513
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 183/424 (43%), Gaps = 45/424 (10%)
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS-----NDGIFS-CPE 152
+T +H + FI+ L SS + S++ + + P S F+ C
Sbjct: 28 TATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTPCLT 87
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALG 211
++ VNA+V ++ + L M + +G P + +N L+ ++ FDKA
Sbjct: 88 YTPLYDTIVNAYVHSHSTDQALTFLHHM--IHEGHVPLSNTFNNLMCLLIRSNYFDKAWW 145
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ + + +V D +F I+I G C F L + E G +PNVV + TLI G
Sbjct: 146 IFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCC 204
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
N+ +M LG + T +L++G +G + ++ + R G++P +
Sbjct: 205 KYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ + C G A +V E+ +KG V+ LI GL R +K EA L+ K+
Sbjct: 265 AYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
K G+ P+ VT+N L+ CDVG+ A RL + GL P +TY+ L++GY++
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384
Query: 452 KEGENLVNEMLD-----------------------------------EGFIPDLATYNSY 476
+LV EM + G +PD+ TY+
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVL 444
Query: 477 MDGL 480
+ GL
Sbjct: 445 IHGL 448
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 3/318 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N F K +G +E M++ G P+ YN LI+ + DKA +
Sbjct: 231 YSVLMNGFFKQGLQREGFQMYENMKR--SGIVPNAYAYNCLISEYCNGGMVDKAFKVFAE 288
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + V+T+NILI G CR KKF A+ L ++ + G +PN+V++N LI GF K
Sbjct: 289 MREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGK 348
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D V + ++ G + VT L+ G + A +LV + R + P Y
Sbjct: 349 MDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTI 408
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ A E+ + K G +P V + LI GL EAS L + + +
Sbjct: 409 LIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH 468
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+SV +N ++ C G + A RL G+ P+ ++ + R+ + KE E
Sbjct: 469 LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAE 528
Query: 456 NLVNEMLDEGFIPDLATY 473
L+ +M++ G P ++ Y
Sbjct: 529 LLLGQMINSGLKPSVSLY 546
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 34/324 (10%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+Y+ ++N +V D+AL F M+ + P TFN L+ R+ FD A +F E+
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150
Query: 252 REK----------------------------------GCNPNVVSFNTLIRGFFGERKFD 277
+ K G +PNVV + TLI G
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
N+ +M LG + T +L++G +G + ++ + R G++P + Y L+
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C G A +V E+ +KG V+ LI GL R +K EA L+ K+ K G+
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VT+N L+ CDVG+ A RL + GL P +TY+ L++GY++ +L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 458 VNEMLDEGFIPDLATYNSYMDGLS 481
V EM + P TY +D +
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFA 414
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
AM + P+V IY LI+G K A + +M R + P+ T+++L++GF +
Sbjct: 182 AMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQ 241
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
++ M+ G PN ++N LI + D+ + EM E G +T
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTY 301
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL+ GLC + +A +LV ++ G+ P Y L+ C G A+ + ++L
Sbjct: 302 NILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKS 361
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+++ TLI G ++ A L+++M + I P VT+ L++ + T
Sbjct: 362 SGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEK 421
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + L GL PD TY +L+ G KE L + + P+ YN+ +
Sbjct: 422 ACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIH 481
Query: 479 GLSNARKSVRQTR 491
G S R R
Sbjct: 482 GYCKEGSSYRALR 494
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 184/396 (46%), Gaps = 17/396 (4%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
+ F WA F+H+ T ++ + + R E H +L P C
Sbjct: 60 WTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE-ELEPL---------CFP 109
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
E ++ +N F KA +++ + M++ + V +++ LI G + D+AL
Sbjct: 110 NEIMYTTVINGFCKAGQVDQAFELLDEMKER-GVKMDVLLHSTLIQGLCRKGRIDEALEQ 168
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-----GCNPNVVSFNTLI 267
+ M + P+V+T+N +++G C+ + D AL LF +M ++ GC P+V+S++T+I
Sbjct: 169 FKSM-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
++ D+ M +GC + VT L+DGLC R + EL++ +G
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
D+ ++ L A + + L K G P+V+ + GL + + EA +
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M++ + PD +T++ +++ C GR AD + P +T+ L+ G++
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +E + +M++ GFIP L TYN MD + A
Sbjct: 408 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGA 443
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 161/332 (48%), Gaps = 9/332 (2%)
Query: 161 VNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+NAFVKA R + L E + L P+ +Y +INGF K + D+A D M
Sbjct: 83 LNAFVKAKRHEEAHRLLKEELEPLC--FPNEIMYTTVINGFCKAGQVDQAFELLDEMKER 140
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
VK DV+ + LI G CR + D AL F+ M E+ C+PNV+++NT++ G + DE
Sbjct: 141 GVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEA 199
Query: 280 VNMAYEM-----IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +M GCE ++ ++D LC RV KA E G P Y
Sbjct: 200 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 259
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC LE++ + +KG ++I ++ L + + +A E++LK
Sbjct: 260 SLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS 319
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P+ VT+N + LC GR +A R+ L + PD +TY ++ G+ + R +
Sbjct: 320 GKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 379
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+++ M+ IP T+ + + G S +KS
Sbjct: 380 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 411
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 4/328 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG----RPSVSIYNVLINGFVKCREFDKALGF 212
++ VN KANR+++ L F+ M K + P V Y+ +I+ K + DKA +
Sbjct: 183 YNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 242
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ RM P+VVT++ LI G C+ + L L M+EKG N++ FN ++ +
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ ++ +++ G + + VT + V GLC GRV +A ++++ V P
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +++ C G A +V + +P + TL+ G +K EA + E M+
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G +P T+N L++ +C A + K PD TY L+ R R
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E + ++ M + +P+ A ++ ++ L
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVL 510
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A K + FE + K +P+V YNV ++G K D+A M
Sbjct: 293 FNAMLHALWKNDEQEKACQFFERLLK-SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +V PDV+T++ +I GFC+ + D A +F M C P+ V+F TL+ GF +K
Sbjct: 352 VESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 411
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + +M+ G T +L+D +C V A E+ R+ P Y L
Sbjct: 412 REAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPL 471
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC A E +D + +P+ C L+E L + + EA +++ +++ G
Sbjct: 472 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGC 531
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P TF L+E+L + A + L + G D TY + V+ + + E
Sbjct: 532 QPLGETFKILVEELYLRKKWEAASK---LLRSPGFVADAATYSLCVAEICKAGKPDEAVE 588
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
++ +M+ +G PD TY + + L
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSL 612
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 37/363 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR------------KLIDG-----RPSVSI------- 192
+ ++A KA R++ F+ MR LIDG RPS +
Sbjct: 223 YSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMK 282
Query: 193 ----------YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+N +++ K E +KA F++R+++ KP+VVT+N+ + G C+ + D
Sbjct: 283 EKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVD 342
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A + EM E P+V++++++I GF + D+ ++ M+ C VT L+
Sbjct: 343 EAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLL 402
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G + +A + D G +P Y L++ +CG + ALE+ ++ +K
Sbjct: 403 HGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQ 462
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P LI+ L R R+ EA ++ M + ++P+ + L+E LC G +A +
Sbjct: 463 PDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV 522
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G P G T+ ILV RK+ E + GF+ D ATY+ + +
Sbjct: 523 LDNVVEVGCQPLGETFKILVEELYL---RKKWEAASKLLRSPGFVADAATYSLCVAEICK 579
Query: 483 ARK 485
A K
Sbjct: 580 AGK 582
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 3/256 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YNVL++ + AL Y +M R + +PD T+ LI CR ++ D A
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M PN + L+ + + DE ++ ++E+GC+ T +ILV+ L
Sbjct: 488 LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ A +L G + Y V ++C G A+EV++++ KG P
Sbjct: 548 RKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGT 604
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ L L + A EKM G P VT+ L+ + C +A R+
Sbjct: 605 YVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMV 664
Query: 428 TKGLDPDGMTYHILVS 443
G P T L S
Sbjct: 665 AAGFTPQAQTMRTLSS 680
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 7/245 (2%)
Query: 242 DLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D+A F+ K G N + L+ F ++ +E + E +E C + +
Sbjct: 57 DVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTT 116
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+++G C G+V +A EL+ + RGV + L++ LC +G ALE + ++
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 176
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-----GILPDSVTFNCLLEDLCDVGR 415
+ P+VI T++ GL + + EA L + M K G PD ++++ +++ LC R
Sbjct: 177 S-PNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 235
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A G P+ +TY L+ G + +R E L+ M ++GF ++ +N+
Sbjct: 236 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNA 295
Query: 476 YMDGL 480
+ L
Sbjct: 296 MLHAL 300
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 89/254 (35%), Gaps = 33/254 (12%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ ++ A+ + L + M++ +P + Y LI + R D+A F D
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRK-KRQPDCNTYAPLIQCLCRARRVDEAKEFLD 489
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M D V P+ + L+ C+ + D A + + E GC P +F L+ + +
Sbjct: 490 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRK 549
Query: 275 KF--------------------------------DEGVNMAYEMIELGCEFSSVTCEILV 302
K+ DE V + +M+ G T ++
Sbjct: 550 KWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
LC RV A + RG P Y L+ + C A A + + + G
Sbjct: 610 RSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFT 669
Query: 363 PSVIACTTLIEGLR 376
P TL LR
Sbjct: 670 PQAQTMRTLSSCLR 683
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 195/432 (45%), Gaps = 46/432 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 PEMER--------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
R +F + A++++ + D + + R+ P + VL +K
Sbjct: 61 ILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVL-EHLMK 119
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ F GFY+ ++ + FNIL+ FC++ LA +F + + G P+VVS
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVS 179
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ G+ DEG + M+ G + T +L++GLC E ++ A EL +
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G++P + L++ C G +A+E+ ++ + P +I TLI GL +
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLE---------------------------------- 408
+A L+++M +G+ PD +T+ L++
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359
Query: 409 -DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 468 PDLATYNSYMDG 479
P + TYN M+G
Sbjct: 420 PSVVTYNVLMNG 431
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C +G+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 139 PASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ML G+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + PDL TYN+ + GL
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 152/326 (46%), Gaps = 2/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + ++ R D + E + + G P V Y LI+ K ++ +A+ +D+M
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLELV--VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKM 421
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VKP +VT++ L+ G+C + D AL L+ EM +KG PN V++ TL++G+ ++ F
Sbjct: 422 KEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAF 481
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + EM + G T IL++GL RV + E++ F G +P Y +
Sbjct: 482 DNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSI 541
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G G A + ++ KKG P+++ T+ I+G R A L+ + ++GI
Sbjct: 542 INGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGI 601
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +N ++ C G A +L GL PD Y+ V+GY E
Sbjct: 602 QPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASK 661
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
M+ + + D Y + +DG S
Sbjct: 662 FYYSMIKQRVVADTEIYTTLIDGFSK 687
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 1/326 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + V+ VK RM++ L + M + V + +L++G+ E KAL +
Sbjct: 255 ELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLF 314
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D +V D V P VT+ +LI G D L R+M E+G + FN +I+G +
Sbjct: 315 DEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRD 374
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+++ + + + +++ G T L+ LC ++ +A L GV P Y
Sbjct: 375 KRWKDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTY 433
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C +G AL++ E+ KG P+ + TTL++G + + A L+ +M +
Sbjct: 434 HSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQ 493
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ T+N L+ L V R + D + ++G P MTY+ +++G+ +
Sbjct: 494 NGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGS 553
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+ +M +G P++ TY S++DG
Sbjct: 554 AFGMYRQMRKKGITPNIVTYTSFIDG 579
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 156/386 (40%), Gaps = 75/386 (19%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K ++++ + ++ M++ +PS+ Y+ L+ G+ + D+AL Y M
Sbjct: 402 IHWLCKHQKLHEAVNLWDKMKE-AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN----------------------- 257
P+ VT+ L+ G+ + K FD A L EMR+ G +
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520
Query: 258 ------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
P +++N++I GF M +M + G + VT +DG
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C A +L+I R G+ P Y ++ C +GN AL + L K G P V
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKE------------------------------- 394
+ + G + L+ EAS M+K+
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700
Query: 395 ----GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRE 448
++PD TF L LC G +D + RLL + LD P+ +TY++L++ R+
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSG-DIDGAK-RLLDDMRRLDVSPNIVTYNMLINACVRD 758
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYN 474
+ +E L +EML G +PD TY+
Sbjct: 759 GKLQEAFQLHDEMLSSGVVPDDTTYD 784
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 15/339 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ +++ F +++LN + N C + ++ +N
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG----------DYTYNILINGL 510
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
NR+ + E +++ + P+ YN +INGFVK A G Y +M + +
Sbjct: 511 YMVNRVCE---VDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGIT 567
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P++VT+ I G+CR DLA+ L +R G P++ ++N I F + ++
Sbjct: 568 PNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHF 627
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+++ G V G N + +A + ++ V+ Y L++
Sbjct: 628 LVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSK 687
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
GN ALE+ E+ +P T L GL R A L++ M + + P+ VT
Sbjct: 688 VGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVT 747
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+N L+ G+ +A +L + G+ PD TY IL
Sbjct: 748 YNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 127/338 (37%), Gaps = 72/338 (21%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RMV V PD + L+ R AL LF EMR KGC + ++ +IR
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ V + EM G + I + GLC +A +++ G P +
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 333 YFGLVEKL------------------------------------CGEGNAGIALEVVDEL 356
Y +V+ L C G G AL++ DE+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317
Query: 357 WKKGNLPSVIA--------------------CTTLIE---------------GLRRLRKG 381
G P+ + C +IE GL R ++
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A GL+E ++ G+ PD T+ CL+ LC + +A L G+ P +TYH L
Sbjct: 378 KDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GY + R E L +EM D+GF P+ TY + M G
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + L +G + + D A D M R V P++VT+N+LI+ R+ K A L
Sbjct: 708 PDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQL 767
Query: 248 FREMREKGCNPNVVSFNTLIR 268
EM G P+ +++ L R
Sbjct: 768 HDEMLSSGVVPDDTTYDILPR 788
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++ K M+D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGI--RPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDV TF+ LI F + K A L+ EM ++ +P++V++++LI GF
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M+ C V+ L+ G C RV + EL + S+RG++ Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A E+ E+ G P+++ TL++GL + K +A + E + +
Sbjct: 436 TLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ YN+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNT 576
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 170/330 (51%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K N+ + + E M+ L G P + Y++LIN F + + AL +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNL--GMPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P++VT + L++G+C +K+ A+ L +M G PN V+FNTLI G F K
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + M+ GC+ VT ++V+GLC G A L+ + + P Y
Sbjct: 202 ASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTT 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC + AL + E+ KG P+V+ ++LI L + +AS L+ M++
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD TF+ L++ G+ V+A++L + +DP +TY L++G+ +R E +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + PD+ +Y++ + G A++
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N + + R+++ + + M + G +P+ +N LI+G + +A+ DRMV
Sbjct: 158 LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK 215
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+PD+VT+ ++++G C+ DLA L +M + P V+ + T+I G + D+
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+N+ EM G + VT L+ LCN GR A L+ D R + P F + L++
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG A ++ DE+ K+ PS++ ++LI G + EA + E M+ + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V+++ L++ C R + L S +GL + +TY L+ G + + +
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK 455
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM+ +G P++ TYN+ +DGL
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGL 476
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 146/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V ++ LI+ FVK + +A YD MV+ + P +VT++ LI+GFC + + D A +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VVS++TLI+GF ++ DEG+ + EM + G ++VT L+ GL
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A E+ + GV P Y L++ LC G A+ V + L + P++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ PD V +N ++ C G +AD L
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ Y+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 164/314 (52%), Gaps = 5/314 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++D + F M K RP SI ++ L++ K +FD + ++M + +
Sbjct: 61 KLDDAVALFGEMVK---SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHY 117
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ILI+ FCR + LAL + +M + G PN+V+ ++L+ G+ ++ E V + +M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + ++VT L+ GL + +A L+ +G P Y +V LC G+
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+A +++++ + P V+ TT+I+GL + + +A L ++M +GI P+ VT++ L
Sbjct: 238 DLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ GR DA RL + ++PD T+ L+ + +E + E E L +EM+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 467 IPDLATYNSYMDGL 480
P + TY+S ++G
Sbjct: 358 DPSIVTYSSLINGF 371
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y V++NG K + D A ++M + +++P V+ + +I G C+NK D AL
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN 277
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE T L+D
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P Y L+ C A ++ + + K P V+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +TLI+G + ++ E L +M + G++ ++VT+ L++ L G A +
Sbjct: 398 SYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM 457
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-PDLATYNSYMDGLSNARK 485
+ G+ P+ MTY+ L+ G + N + E +V E L + P + TYN ++G+ A K
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCK-NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 35/302 (11%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
R+ G+ S L + + D A+ + MV+ R P ++ F+ L+S + K
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK 96
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
FD+ + L +M+ G N +++ LI F + + + +M++LG E + VT
Sbjct: 97 FDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C+ R+ +A LV D+++ G
Sbjct: 157 LLNGYCHSKRISEAVALV-----------------------------------DQMFVTG 181
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+ + TLI GL K EA L+++M+ +G PD VT+ ++ LC G T A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L L+P + Y ++ G + + NL EM +G P++ TY+S + L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 481 SN 482
N
Sbjct: 302 CN 303
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F + L +P V YN +I+GF + ++A + M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ +N LI R+ + + L +EMR G
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A K + D +++F +++ ++ YN++IN + + AL +M
Sbjct: 68 FSKLLSAIAKMKKF-DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P +VT N L++GFC + A+ L +M E G P+ V+F TL+ G F K
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + M+ GC+ VT +++GLC G A L+ + + Y +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC + AL + E+ KG P V ++LI L + +AS L+ ML+ I
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VTFN L++ G+ ++A++L + +DP+ +TY+ L++G+ +R E +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ M+ + +PD+ TYN+ ++G A+K V
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K ++D L F M K I RP V Y+ LI+ + A
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGI--RPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTFN LI F + K A LF EM ++ +PN+V++N+LI GF
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE + M+ C VT L++G C +V+ EL D SRRG++ Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ + A V ++ G P+++ TL++GL + K +A + E + K
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N + E +C G+ D L S KG+ PD + Y+ ++SG+ ++ ++E
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L +M ++G +PD TYN+
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNT 560
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 156/293 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K ++FD + F ++M V ++ T+NI+I+ CR + AL +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + E V + +M+E+G + +VT LV GL
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +G P Y ++ LC G +AL +++++ K V+
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+T+I+ L + R +A L +M +GI PD T++ L+ LC+ GR DA RL
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++P+ +T++ L+ + +E + E E L +EM+ P++ TYNS ++G
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + ++++ L M KL G PS+ N L+NGF +A+ D+M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD VTF L+ G ++ K A+ L M KGC P++V++ +I G +
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M + E V ++D LC V A L + +G+ P F Y L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ +LI+ + K +EA L ++M++ I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT+N L+ C R +A ++ L +K PD +TY+ L++G+ + + +G
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L +M G + + TY + + G A
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR+++ + + M ++ +P + L++G + + +A+ +RMV
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +I+G C+ + DLAL L +M + +VV ++T+I R D+ +
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G T L+ LCN GR A L+ D R + P + L++
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ ++ P+++ +LI G + EA + M+ + LPD
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ C + VD L S +GL + +TY L+ G+ + + + + +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G P++ TYN+ +DGL
Sbjct: 441 MVSDGVHPNIMTYNTLLDGL 460
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 149/300 (49%), Gaps = 6/300 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++AF K ++ + F+ M ++ ID P++ YN LINGF D+A +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV PDVVT+N LI+GFC+ KK + LFR+M +G N V++ TLI GFF
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ G + +T L+DGLC G++ KA + + + P + Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ E +C G ++ L KG P VIA T+I G + EA L KM ++G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 396 ILPDSVTFNCLLE-DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
LPDS T+N L+ L D + A+ ++ + S + D TY LV+ + R +G
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR-FAGDASTYG-LVTDMLHDGRLDKG 608
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N LI+ F K + +A +D M++ + P++VT+N LI+GFC + + D A +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI GF +K +G+ + +M G ++VT L+ G
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A + GV P Y L++ LC G A+ V + L K P +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ EG+ + K + L + +G+ PD + +N ++ C G +A L +
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD TY+ L+ + R+ + L+ EM F D +TY D L + R
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+A+ + MV+ R P +V F+ L+S + KKFDL + +M G + N+ ++N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+I + + + +M++LG S VT L++G C+ R+ +A LV
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + LV L A A+ +V+ + KG P ++ +I GL + + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM K I D V ++ +++ LC DA L KG+ PD TY L+S
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++ML+ P++ T+NS +D + K + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 164/335 (48%), Gaps = 4/335 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F + M+ MR+ P IY ++I GF + +AL D M
Sbjct: 302 FSCLIGLFTRRGEMDHAAEYLREMREF-GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDVVT+N L++G C+ ++ A L EM+E+G P++ +F TLI G+ +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + + + VT L+DG+C +G + KA EL D R + P Y L
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +G A +DE+ KG +P+++ ++I+G R + + KM + +
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD +T+N L+ G+ +A L + + + PD +TY++++SG++ +E +
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600
Query: 457 LVNEMLDEGFIPDLATYNSYMDG---LSNARKSVR 488
+ +M G PD TY S ++G N++KS +
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQ 635
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 165/344 (47%), Gaps = 43/344 (12%)
Query: 178 EAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
EA LID +P + YN ++ G ++ +DKA + M V PDV +FN+L
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF---GE-----------RKFD 277
I GFCR + + AL ++EMR + P+VVSF+ LI G F GE R+F
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI-GLFTRRGEMDHAAEYLREMREFG 329
Query: 278 ----------------------EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
E + + EM+ GC VT L++GLC E R+ A
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAE 389
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
EL+ + RGV P + L+ C +GN AL+ D + + P ++ TLI+G+
Sbjct: 390 ELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGM 449
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R +A+ L + M I P+ VT++ L++ C+ G+ +A KG+ P+
Sbjct: 450 CRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNI 509
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
MTY+ ++ GY R +G+ + +M + +PDL TYN+ + G
Sbjct: 510 MTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 13/320 (4%)
Query: 156 IFHFAVNAFVKAN------RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
I+ + F +A R+ D ++AF + P V YN L+NG K R A
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCL-------PDVVTYNTLLNGLCKERRLSDA 388
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M V PD+ TF LI G+CR+ + AL F + ++ P++V++NTLI G
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + +M + VT IL+D C +G+V A + + +G++P
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y +++ C GN + + ++ +P +I TLI G + K EA L++
Sbjct: 509 IMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLK 568
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M E + PD+VT+N ++ G +AD + +G++PD TY +++G+
Sbjct: 569 IMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAG 628
Query: 450 RRKEGENLVNEMLDEGFIPD 469
K+ L +EML +G PD
Sbjct: 629 NSKKSFQLHDEMLQKGLAPD 648
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L +A R ++ V+ Y N++++ + K +F + M + V PDVVT N+++
Sbjct: 142 LTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMV 201
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
R + A+ L M KG P +V++N++++G ++D+ + M G
Sbjct: 202 DARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVA 261
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ +L+ G C G + +A + R V P + L+ G A E
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ E+ + G +P + T +I G R +EA + ++M+ G LPD VT+N LL LC
Sbjct: 322 LREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCK 381
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R DA+ L +G+ PD T+ L+ GY R+ ++ + + D+ PD+ T
Sbjct: 382 ERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT 441
Query: 473 YNSYMDGL 480
YN+ +DG+
Sbjct: 442 YNTLIDGM 449
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I G+ + K F +M D+V PD++T+N LI G+ + K A L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M + P+ V++N +I GF E + +M G E T +++G
Sbjct: 567 LKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVV 626
Query: 308 EGRVLKACELVIDFSRRGVLPKD 330
G K+ +L + ++G+ P D
Sbjct: 627 AGNSKKSFQLHDEMLQKGLAPDD 649
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 39/231 (16%)
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
E ++ T I+V C + + ++ + +R V P + +V+ G+ A+
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++D + KG P ++ ++++GL R + +A + M G+ PD +FN L+ C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 412 DVGRTVDADRLRLLASTK-------------------------------------GLDPD 434
G +A LR + GL PD
Sbjct: 276 RAGELEEA--LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ Y +++ G+ R E + +EM+ G +PD+ TYN+ ++GL R+
Sbjct: 334 GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 14/401 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
+ F WA + H + ++ L+ + VL ++ C PE
Sbjct: 184 LNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECP-------PE 236
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
F + + ++ +A ++ + L M+K PS+SI N I VK + +KAL F
Sbjct: 237 A---FGYVMVSYSRAGKLRNALRVLTLMQK-AGVEPSLSICNTTIYVLVKGGKLEKALKF 292
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+RM +KPD+VT+N LI G+C + + AL L + KGC P+ VS+ T++ GF
Sbjct: 293 LERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVM-GFLC 351
Query: 273 ERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ K E V E + VT L+ L G A + + +G
Sbjct: 352 KEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDK 411
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V C +G A +V +++ +G P V+ T +++G RL + EA ++++
Sbjct: 412 VGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQ 471
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K G P++V++ LL LC G++++A + ++ P+ +TY ++ G RE +
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGK 531
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E +L EM+++GF P N + L +K V +
Sbjct: 532 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK 572
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 159/333 (47%), Gaps = 18/333 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS-------VSIYNVLINGFV-KCREFDK 208
++ + + NR+ D L +LI G PS VS Y V+ GF+ K ++ ++
Sbjct: 308 YNSLIKGYCDLNRIEDAL-------ELIAGLPSKGCPPDKVSYYTVM--GFLCKEKKIEE 358
Query: 209 ALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
++MV + + PD VT+N LI ++ D AL +E ++KG + + V ++ ++
Sbjct: 359 VKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIV 418
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
F + + DE ++ +M GC VT +VDG C GR+ +A +++ + G
Sbjct: 419 HSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCK 478
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ LC G + A E+++ + P+ I ++ GLRR K EA L
Sbjct: 479 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+M+++G P V N L++ LC + V+A + KG + + + ++ G+ +
Sbjct: 539 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 598
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +++++M G PD TY + D L
Sbjct: 599 IGDMEAALSVLDDMYLSGKHPDAVTYTALFDAL 631
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 151/350 (43%), Gaps = 48/350 (13%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID-----GRPSVSIYNVLINGFVKCREFDKALGFYDR 215
V++F + RM+ EA +ID P V Y +++GF + D+A +
Sbjct: 418 VHSFCQKGRMD------EAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQ 471
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + KP+ V++ L++G C + K A + E PN +++ ++ G E K
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGK 531
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E ++ EM+E G + V +L+ LC +V++A + + + +G ++
Sbjct: 532 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 591
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C G+ AL V+D+++ G P + T L + L + + EA+ L+ KML +G
Sbjct: 592 VIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 651
Query: 396 ILPDSVT---------------------------------FNCLLEDLCDVGRTVDADRL 422
+ P VT +N ++E LCD G +A++L
Sbjct: 652 LDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKL 711
Query: 423 --RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
++L + +D + T H+L+ Y ++ + M PDL
Sbjct: 712 LGKVLRTASKVDAN--TCHVLMESYLKKGVAISAYKVACRMFRRNLTPDL 759
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 171/425 (40%), Gaps = 34/425 (8%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
+Q+T ++L+H L H H D F + F D + IV S R
Sbjct: 375 DQVTYNTLIHMLSK--HGHAD----DALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMD 428
Query: 127 ELHS-VLNFIS--ANPCPCSNDGIFS-------CPEMERIFHFAVNAFVKANRMN----- 171
E S V++ S NP + I E ++I K N ++
Sbjct: 429 EAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALL 488
Query: 172 DGLL----AFEAMRKLID------GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
+GL + EA R++I+ P+ Y +++G + + +A MV
Sbjct: 489 NGLCHSGKSLEA-REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGF 547
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
P V N+LI C+N+K A E KGC NVV+F T+I GF + ++
Sbjct: 548 FPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALS 607
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ +M G +VT L D L +GR+ +A EL++ +G+ P Y ++ +
Sbjct: 608 VLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYS 667
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G L +++++ K+ +V +IE L EA L+ K+L+ D+
Sbjct: 668 QWGRVDDMLNLLEKMLKRQPFRTVY--NQVIEKLCDFGNLEEAEKLLGKVLRTASKVDAN 725
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T + L+E G + A ++ + L PD + + + E +NL+
Sbjct: 726 TCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRF 785
Query: 462 LDEGF 466
++ G
Sbjct: 786 VERGI 790
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 173/347 (49%), Gaps = 15/347 (4%)
Query: 150 CPEMER--IFH------FAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLING 199
C +ME I H +N F + +++ AF M K++ P I+N L+NG
Sbjct: 111 CKQMESKGIAHSIYTLSIMINCFCRCRKLS---YAFSTMGKIMKLGYEPDTVIFNTLLNG 167
Query: 200 F-VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
++CR +AL DRMV KP ++T N L++G C N K A+ L M E G P
Sbjct: 168 LCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N V++ ++ + + + +M E + +V I++DGLC +G + A L
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G Y L+ C G +++ ++ K+ P+V+ + LI+ +
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K EA L+++M++ GI P+++T+N L++ C R +A ++ L +KG DPD MT+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+IL++GY + NR +G L EM G I + TYN+ + G + K
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 171/347 (49%), Gaps = 12/347 (3%)
Query: 142 CSNDGIFSCPEMERIFH-FAVNAFVKANRMNDGLLAFEA------MRKLIDGRP--SVSI 192
C N+ +F C ER F F+ ++++ GL+ +A R +I RP +V
Sbjct: 34 CPNELLFCC---ERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVID 90
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N L + K ++++ L +M + + T +I+I+ FCR +K A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P+ V FNTL+ G E + E + + M+E+G + + +T LV+GLC G+V
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L+ G P + Y ++ +C G +A+E++ ++ ++ + + +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + A L +M +G D +T+N L+ C+ GR D +L + +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +L+ + +E + +E + L+ EM+ G P+ TYNS +DG
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 167/381 (43%), Gaps = 51/381 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K +++ F M I G + + YN LI GF +D
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEME--IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ P+VVTF++LI F + K A L +EM ++G PN +++N+LI GF E +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M MI GC+ +T IL++G C R+ EL + S RGV+ Y
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKML 392
LV+ C G +A ++ E+ + P +++ L++GL L K +E G +EK
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 393 KE--------------------------------GILPDSVTFNCLLEDLCDVGRTVDAD 420
E G+ D+ +N ++ +LC AD
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY------- 473
L + +G PD +TY+IL+ + ++ L+ EM GF D++T
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Query: 474 ------NSYMDGLSNARKSVR 488
S++D LS R S++
Sbjct: 624 SSGELDKSFLDMLSTTRASLK 644
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 161/327 (49%), Gaps = 1/327 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ +N R+++ L + M ++ +P++ N L+NG + A+ DR
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +P+ VT+ +++ C++ + LA+ L R+M E+ + V ++ +I G +
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D N+ EM G + +T L+ G CN GR +L+ D +R + P +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ EG A +++ E+ ++G P+ I +LI+G + + EA +++ M+ +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD +TFN L+ C R D L S +G+ + +TY+ LV G+ + + + +
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ PD+ +Y +DGL +
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCD 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 152/340 (44%), Gaps = 43/340 (12%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E +RK+ + + Y+++I+G K D A ++ M K D++T+N LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 233 SGFCRNKKFDLALGLFR-----------------------------------EMREKGCN 257
GFC ++D L R EM ++G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN +++N+LI GF E + +E + M MI GC+ +T IL++G C R+ EL
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL-- 375
+ S RGV+ Y LV+ C G +A ++ E+ + P +++ L++GL
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 376 -RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L K +E G +EK E D + ++ +C+ + DA L KG+ D
Sbjct: 486 NGELEKALEIFGKIEKSKME---LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
Y+I++S R++ + + L +M +EG PD TYN
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 36/295 (12%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++S + L +G V + D A+ + M++ R P V+ FN L S + K+++L L L
Sbjct: 53 NLSYRDKLSSGLVGIKA-DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC 111
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
++M KG ++ + + +I F RK + ++++LG E +V L++GLC E
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
RV +A LE+VD + + G+ P++I
Sbjct: 172 CRVSEA-----------------------------------LELVDRMVEMGHKPTLITL 196
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TL+ GL K +A L+++M++ G P+ VT+ +L +C G+T A L
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ + D + Y I++ G ++ NL NEM +GF D+ TYN+ + G NA
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 179/378 (47%), Gaps = 10/378 (2%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
D F+H T+ I++ L F + +VL + +E ++ A+
Sbjct: 34 DGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD---------IDNSLLEGVYIGAMK 84
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
++ + ++ + + FE M + PSV YN ++N V+ F +A + RM +
Sbjct: 85 SYGRKGKVQEAVDVFERM-DFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIV 143
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV TF I I FCR K+ AL L M +GC N V++ T++ GF+ E E +
Sbjct: 144 PDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYEL 203
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+M+ +G T L+ LC +G V ++ L+ ++G+ F + ++ LC
Sbjct: 204 FNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCR 263
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+G A+ ++D + ++G P V+ TLI GL + VEA + K++ G+ PD T
Sbjct: 264 KGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFT 323
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N L++ C +G +A+++ A KG PD TY L++G + + L N L
Sbjct: 324 YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAAL 383
Query: 463 DEGFIPDLATYNSYMDGL 480
+G P + YN + GL
Sbjct: 384 GKGLKPTVILYNMLIKGL 401
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 178/380 (46%), Gaps = 13/380 (3%)
Query: 108 DHTTFLFIVRSLASSYR-FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVK 166
D TF ++S + R S L + N +S C + + C V F +
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQG---CQLNAVAYCT--------VVAGFYE 193
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
N + F M + I P VS +N L++ K E ++ +++++ + ++
Sbjct: 194 ENYRVEAYELFNDMLR-IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLF 252
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFNI I G CR A+ + + +G P+VV++NTLI G E +++
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ G E T L+DG C G + A +++ +G +P +F Y L+ LC
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
AL + + KG P+VI LI+GL + ++A +M +M + G D T+N +
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC +G DA+ L A KG PD T++ L+ GY ++ + + ++N+M G
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492
Query: 467 IPDLATYNSYMDGLSNARKS 486
PD+ TYNS ++GLS A K+
Sbjct: 493 TPDVITYNSVLNGLSKAVKN 512
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 3/309 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + + KL++G P YN LI+G+ K A + PD T+ LI+
Sbjct: 305 AEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLIN 364
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C+N + D AL LF KG P V+ +N LI+G E + + M EM E GC
Sbjct: 365 GLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSS 424
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
T ++++GLC G V A L+ D +G +P F + L++ C + ++++
Sbjct: 425 DIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQIL 484
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+++W G P VI +++ GL + K + E M+++G +P+ +T+N L E LC
Sbjct: 485 NKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKA 544
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP-DLAT 472
G+ +A L KG+ PD +++ ++SG+ K L M ++ + AT
Sbjct: 545 GKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTAT 604
Query: 473 YNSYMDGLS 481
YN ++ +
Sbjct: 605 YNIMINAFA 613
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN LI G K +A + ++V ++PD T+N LI G+C+ A +
Sbjct: 284 PDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKI 343
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ KG P+ ++ +LI G + D + + + G + + + +L+ GLC
Sbjct: 344 LQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQ 403
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG +L+A +++ + S G + Y ++ LC G A ++++ KG +P V
Sbjct: 404 EGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFT 463
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + K ++ KM G+ PD +T+N +L L + D
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMV 523
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG P+ +TY+IL + + E +LV+E+L++G PD ++ + + G +N
Sbjct: 524 EKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFAN 578
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 142/317 (44%), Gaps = 9/317 (2%)
Query: 174 LLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
L A + M ++ + S I YN++ING K A + + PDV TFN L
Sbjct: 408 LQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTL 467
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G+C+ K + + + +M G P+V+++N+++ G K ++ + M+E GC
Sbjct: 468 IDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGC 527
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ +T IL + LC G+V +A +LV + +G+ P + ++ G+ A +
Sbjct: 528 VPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQ 587
Query: 352 VVDELWKKGNLPSVIAC-TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ + ++ + A +I L +M G PD+ T+ +++
Sbjct: 588 LFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGF 647
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G T + L KG P T+ +++ ++R E ++++ M+ G +P++
Sbjct: 648 CITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707
Query: 471 ATYNSYMDGLSNARKSV 487
++ +S A K V
Sbjct: 708 ------VNSISEADKKV 718
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N KA + D + FE M + P+ YN+L K + ++AL D +
Sbjct: 499 YNSVLNGLSKAVKNEDLMETFETMVEK-GCVPNKITYNILTESLCKAGKVNEALDLVDEI 557
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERK 275
+ + PD V+F +ISGF N A LFR M E+ + ++N +I F +
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLD 617
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
G + EM GC + T +++DG C G + +++ +G +P +
Sbjct: 618 LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGR 677
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++ LC + A++++ + G +P V+
Sbjct: 678 VINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 171/373 (45%), Gaps = 40/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCRE 205
F P + +N+F NR AF + K++ +P + + LI G +
Sbjct: 96 FGIPPDVYTLNILINSFCHLNRPG---FAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
AL +D+M+ + +P+VVT+ LI+G C+ + A+ L R M + C P+VV + +
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ +M+ G CE+ VT
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG++ +A ++V RGV P Y L++ C + A+
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + G P+VI+ TLI G ++++ +A+ L E+M ++ ++P++VT+N L+ L
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR DA L G PD TY IL+ +++ E L+ + PD+
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452
Query: 471 ATYNSYMDGLSNA 483
Y +DG+ A
Sbjct: 453 QIYTIVIDGMCRA 465
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 159/323 (49%), Gaps = 1/323 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + PS +N L+ K +++ ++M + PDV T
Sbjct: 46 NTLDDALSSFNRMLHM-HPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 104
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC + A + ++ + G P+ +F TLIRG E K + +++ +MI
Sbjct: 105 LNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 164
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + VT L++GLC G A L+ + P Y +++ LC +
Sbjct: 165 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 224
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + ++ +G P + T+LI L L + + L+ +M+ I+PD V F+ ++
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ +A + + +G++P+ +TY+ L+ G+ ++ E + + M+ G+
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344
Query: 468 PDLATYNSYMDGLSNARKSVRQT 490
P++ +YN+ ++G ++ + T
Sbjct: 345 PNVISYNTLINGYCKIQRMDKAT 367
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 156/314 (49%), Gaps = 4/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+ ++I+ + P V I++ +++ K + +A D M+ V+P+VVT+N L+ G C
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A+ +F M G PNV+S+NTLI G+ ++ D+ + EM + ++VT
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ GR+ A L + G +P Y L++ LC + + A+ ++ +
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + T +I+G+ R + A + + +G+ P+ T+ ++ LC G
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A++L + G PDG TY+ + G + L+ EML GF D++T +
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564
Query: 478 DGLSNAR--KSVRQ 489
+ L + + +SV+Q
Sbjct: 565 EMLCDDKLDQSVKQ 578
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 2/318 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF K++ P + Y LI+ E+ ++M+ ++ PDVV F+ ++
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ K A + M +G PNVV++N L+ G + + DE V + M+ G
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ ++ L++G C R+ KA L + ++ ++P Y L+ LC G A+ +
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ G +P + L++ L + EA L++ + + PD + +++ +C
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A + S+KGL P+ TY I+++G R E L EM G PD TY
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525
Query: 474 NSYMDGLSNARKSVRQTR 491
N+ GL ++++R +
Sbjct: 526 NTITQGLLQNKEALRAIQ 543
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K N + +M + + +P V +Y +I+ K R+ +A + +MV
Sbjct: 179 INGLCKVGNTNAAIRLLRSMEQG-NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQG 237
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD+ T+ LI C ++ L +M P+VV F+T++ E K E
Sbjct: 238 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 297
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ MI G E + VT L+DG C + + +A ++ G P Y L+
Sbjct: 298 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 357
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A + +E+ +K +P+ + TL+ GL + + +A L +M+ G +PD
Sbjct: 358 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDL 417
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+ LL+ LC +A L +DPD Y I++ G R + ++ +
Sbjct: 418 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 477
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G P++ TY ++GL
Sbjct: 478 LSSKGLRPNVRTYTIMINGL 497
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 163/345 (47%), Gaps = 45/345 (13%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC-------- 236
D +P+V Y++LI+G K + +KAL +D+M+ + P TFN +I+G C
Sbjct: 494 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEA 553
Query: 237 RNK---------------------------KFDLALGLFREMREKGCNPNVVSFNTLIRG 269
R+K D AL ++REM E G +PNVV++ +LI G
Sbjct: 554 RDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLING 613
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + D + EM E G E L+DG C + A +L + G+ P
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 673
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC-----TTLIEGLRRLRKGVEA 384
Y ++ N AL +W K + I C TTLI+GL + + V A
Sbjct: 674 RIVYNSMISGFRDLNNMEAAL-----VWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFA 728
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
S L +ML +GI+PD +TF+ L+ LC+ G+ +A ++ K + P + Y+ L++G
Sbjct: 729 SDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAG 788
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
Y RE KE L +EMLD G +PD TY+ ++G +S+ +
Sbjct: 789 YFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSR 833
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 177 FEAMRKLID-----GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+E KL D G ++ YN++++ K + D+A D MV + P+VV++N +
Sbjct: 411 WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G CR D+A +F +M + PNVV+++ LI G F + ++ +++ +M+ L
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ T +++GLC G++ +A + + +F G +P Y +V+ EGN AL
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
V E+ + G P+V+ T+LI G + + A ++M ++G+ D ++ L++ C
Sbjct: 591 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 650
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
A L GL P+ + Y+ ++SG+ N + +M+++ DL
Sbjct: 651 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 710
Query: 472 TYNSYMDGL 480
TY + +DGL
Sbjct: 711 TYTTLIDGL 719
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 1/293 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV N L+ G++K +++A +D V D ++ T+NI++S C+ K D A L
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSL 451
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +G PNVVS+N +I G + D ++ +M+ + + VT IL+DG
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G KA +L + P DF + ++ LC G A + + ++G +PS +
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++++G + A + +M + G+ P+ VT+ L+ C R A + R
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL+ D Y L+ G+ + + ++L E+L+ G P+ YNS + G
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 161/360 (44%), Gaps = 37/360 (10%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R+F++ +NA+++ANR+ + + F AM D P V N+L+ V+ + Y+
Sbjct: 151 RVFNYLLNAYIRANRIENAIDCFNAM-ICQDVIPWVPYMNILLTALVRRNMIGELRDLYN 209
Query: 215 RMV----------------------------------RDR-VKPDVVTFNILISGFCRNK 239
+MV ++R VK D ++I+I C+
Sbjct: 210 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKP 269
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+L L L EM+E+G P+ +F ++I + E + + EMI G + V
Sbjct: 270 NSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVAT 329
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ G C +G + A L + G+ P Y L+E C GN A E+ ++
Sbjct: 330 SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G PSV +L+ G + EAS L ++ + G+ + T+N ++ LC G+ +A
Sbjct: 390 GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEA 448
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L +G+ P+ ++Y+ ++ G+ R+ ++ ++ML P++ TY+ +DG
Sbjct: 449 CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L+N +++ + A+ ++ M+ V P V NIL++ R +G R++
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRN----MIGELRDL 207
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
K ++RG +G+ T ++V EGRV
Sbjct: 208 YNK----------MVLRGIYGDH---------------------FTVHVMVRACLKEGRV 236
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A E + RGV Y +++ +C + N+ + LE+++E+ ++G +PS T++
Sbjct: 237 EEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSV 296
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I VEA L E+M+ G + V L++ C G A L + GL
Sbjct: 297 IVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGL 356
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY +L+ G ++ L +M G P + NS + G A
Sbjct: 357 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 408
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 2/298 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y LING K A+ M + +P+VV F+ LI C++++ A
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EM KG +PN+V++N+LI G ++ + EM++ T +VD LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG V +A ++V RGV P Y L++ C +A++V D + K + +VI
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI G +++ +A L E+M ++ + P++VT+N L+ LC VGR DA L
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411
Query: 427 STKGLDPDGMTYHILVSGYTRENRR-KEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G PD +TY L S Y +NR + L+ + + PD+ Y + +DG+ A
Sbjct: 412 VARGQIPDLVTYRTL-SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
M +++D + P V N +++ K +A D M+ V+P+VVT+N L+ G C
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D+A+ +F M K C NV+S+NTLI G+ + D+ + + EM ++VT
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ GR+ A L + RG +P Y L + LC + A+ ++ +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + TT+++G+ R + +A L + +G+ P+ T+N ++ LC G
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L + G P+ TY+++ G+ R N L+ EML GF D++T +
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Query: 478 DGLSN--ARKSVRQ 489
LS+ +SV+Q
Sbjct: 568 GMLSDDGLDQSVKQ 581
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 152/334 (45%), Gaps = 3/334 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
+F +++ K ++ + F M + G P++ YN LI+G K E+ +
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV ++ PDV T N ++ C+ A + M +G PNVV++N L+ G
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D V + M+ C + ++ L++G C V KA L + SR+ + P Y
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A+ + E+ +G +P ++ TL + L + R +A L++ +
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
PD + +L+ +C G DA L S+KGL P+ TY+I++ G ++ E
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L +EM G P+ TYN G +++R
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS +N L+ K + L +M + PDV T I+I+ C + D A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ + G P+ +F TLIRG E K E +++ +MI G + + VT L++GLC
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A L+ + P + L++ LC + A + E+ KG P+++
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+LI GL +L + + LM +M+ I+PD T N +++ LC G +A + +
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G++P+ +TY+ L+ G+ N + + M+ + + ++ +YN+ ++G
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 359
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%)
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D AL F M K P+ V FN L+ + ++++ +M G T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+++ LC+ RV A + + G P + L+ LC EG G AL + D++ +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+V+ TLI GL ++ A L+ M + P+ V F+ L++ LC + +A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ TKG+ P+ +TY+ L+ G + K L+NEM+D +PD+ T N+ +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P D+ L+ + + L + ++ G P V +I L L + A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ K+LK G PD+ TF L+ LC G+ +A L +G P+ +TY L++G +
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M P++ +++ +D L R+
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 10/322 (3%)
Query: 171 NDGLLA----FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
N G+LA + L P+V+ YN I G K A+ M+ + + PDVV
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
++N LI G+CR A LF E+R P +V++NTL+ G + + + + EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE--- 343
I G VT ILV+G C G + A E + G+ + D + ++ GE
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL---ELDSYAYATRIVGELKL 492
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A + +E+ KG P +I +++GL +L EAS L++KM+ +G++PD VT+
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
++ + GR + +KGL P +TY +L+ G+ + R + +EM +
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
+G +P++ TYNS ++GL R+
Sbjct: 613 KGILPNVITYNSLINGLCKVRR 634
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 180/393 (45%), Gaps = 9/393 (2%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCP 151
+F WA + FR F I+ LA + + V+ I+AN + I C
Sbjct: 99 LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCV 158
Query: 152 EME---RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREF 206
E +I + + K + + L F+ K+I R P V N ++
Sbjct: 159 SSEVSVKILDLLIWVYSKKSMVEQCLSVFD---KMIKSRLSPDVKNCNRILRILRDKDLM 215
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ Y M +KP +VT+N L+ +C+ K L L EM+ +GC PN V++N L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G + +F++ + EM++ G + S+ T L+ G N+G + +A L + +G
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y + LC G A++ + ++ LP V++ TLI G RL ++A
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L +++ + P VT+N LL+ LC G A +L++ +G+ PD +TY ILV+G
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 455
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + +EML EG D Y + + G
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 156/358 (43%), Gaps = 36/358 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++++ K ++ GL M++ P+ YNVLING K EF++A G M
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRR-GCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +K T+N LI G+ AL L EM KG +P V ++N+ I G +
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 277 DEGVNMAYEMI-------------------ELGCEFSS----------------VTCEIL 301
+ + +M+ LG + VT L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGLC +G + A +L ++ G+ P Y LV C G+ +A E DE+ +G
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
A T I G +L A L E+ML +G PD + +N +++ LC +G +A
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L + G+ PD +TY ++ + R ++G + EML +G P + TY + G
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + + + L F+ +R I P++ YN L++G + E + A M
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRS-IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + + PD+VT+ IL++G C+ +A F EM +G + ++ T I G
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ EM+ G + ++VDGLC G + +A EL+ GV+P Y +
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G E+ E+ KG PSV+ T LI G + A +M ++GI
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LP+ +T+N L+ LC V R A KG+ P+ +Y IL++ +E +
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L +MLD G PD T+++ + L
Sbjct: 676 LYKQMLDRGVQPDSCTHSALLKQL 699
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 18/318 (5%)
Query: 125 FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
F EL S+ F + DG+ E+E V +K +N+G+
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELE------VAQQLKVEMINEGI---------- 440
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
P + Y +L+NG K A F+D M+ + ++ D + I G + A
Sbjct: 441 --APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L EM KG P+++ +N ++ G +E + +M+ G VT ++
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
GR+ K E+ + +G+ P Y L+ G+G A E+ +KG LP+
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
VI +LI GL ++R+ +A +M+++GI P+ ++ L+ + C++G +A L
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678
Query: 425 LASTKGLDPDGMTYHILV 442
+G+ PD T+ L+
Sbjct: 679 QMLDRGVQPDSCTHSALL 696
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L V D++ K P V C ++ LR +A + M + GI P VT+N LL+
Sbjct: 184 LSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS 243
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G+ L +G P+ +TY++L++G +++ ++ + L+ EML G
Sbjct: 244 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS 303
Query: 470 LATYNSYMDGLSN 482
TYN + G N
Sbjct: 304 AYTYNPLIYGYFN 316
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 207/461 (44%), Gaps = 55/461 (11%)
Query: 62 LTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTID-SFRHDHTTFLFIVRSLA 120
+ P ++ P L+ + H + F IF +A F H + T+ I+ L+
Sbjct: 6 IKPWPQRLYPKRLISMIT-----HQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLS 60
Query: 121 SSYRFSELHSVLNFISANPC--PCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+ F + S+L+ +S N C +D +F + + A R L F
Sbjct: 61 RARAFDGVESLLSQLSRNSSHIKCGDD----------VFISVIRNYGLAGRPRLALKTFT 110
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNILISGFC 236
+++ +PSV + N L+N FV+ + + +G + +D+ V P+V +FNILI C
Sbjct: 111 RIKEEFSMQPSVKLLNTLLNVFVQNKRY-HLVGSTLKNCKDKYGVLPNVFSFNILIKALC 169
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + AL +F EM G PN+V++ T++ GF + E+ + G +
Sbjct: 170 KKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDAT 229
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T +L+ G C +GR+ A +++ + GV P + Y +++ C E +G A ++D++
Sbjct: 230 TYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDM 289
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS---------------- 400
K LPS C +I+ L K A L ++ML++ LPD+
Sbjct: 290 LDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKV 349
Query: 401 ------------------VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+T+N L+ +C+ G +A RL K P+ TY++L+
Sbjct: 350 WEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLI 409
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G+ + KEG ++ EMLD G +P+ +TY ++GL +
Sbjct: 410 KGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQES 450
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 38/314 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A K N + + L F+ M + P++ Y ++ GFV + A + +
Sbjct: 161 FNILIKALCKKNDVENALKVFDEMPTM-GMIPNLVTYTTILGGFVSRGDLVNAEKVFSEI 219
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PD T+ +L+ G+C+ + A+ + M G PN V++ +I + E+K
Sbjct: 220 SDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKS 279
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E N+ +M++ SS C ++D LC +G+V AC L + LP + L
Sbjct: 280 GEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTL 339
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL------------------RRL 378
+ LC EG A ++ DE ++G +PS++ TLI G+ +R
Sbjct: 340 IHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRC 398
Query: 379 R----------KGVEASG-------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
R KG +G ++E+ML G LP+ T+ L+E L + G D D+
Sbjct: 399 RPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDK 458
Query: 422 LRLLA-STKGLDPD 434
+ +A +++ +D D
Sbjct: 459 VMSMAMASREVDAD 472
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
K G LP+V + LI+ L + A + ++M G++P+ VT+ +L G V
Sbjct: 151 KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLV 210
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A+++ S KG PD TY +L+ GY ++ R + +++ M G P+ TY +
Sbjct: 211 NAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMI 270
Query: 478 DGLSNARKS 486
D +KS
Sbjct: 271 DAYCKEKKS 279
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 152/307 (49%), Gaps = 2/307 (0%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +R + D RP V +Y+ +I+G K + D+A Y M + PDV+T+ LI
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GFC + A GL EM K NPN+ ++NTLI E K E N+ M + G +
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V IL+DG C G V KA ++ + + GV P + Y ++ LC A+ ++
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ K +P + ++LI+GL +L + L ++M G + VT+N LL+ LC
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
A L + +G+ P+ TY L+ G + R K+G+ L +L +G+ D+ TY
Sbjct: 374 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTY 433
Query: 474 NSYMDGL 480
+ GL
Sbjct: 434 TVMISGL 440
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 35/328 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + + ++ VK + + + +M + PD+VT +ILI+ FC + + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFF--GERK-----FDEGVNMAYEMIELG--------CE 292
++ + G PN + NTL++G GE K D+ V ++M ++ C+
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 293 FSSVTCEI--------------------LVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
C I ++DGLC + V +A +L + + RG+ P
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ C G A +++E+ K P++ TLI+ L + K E+ L+ M
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+G+ PD V ++ L++ C VG A ++ L+ G++PD +Y+I+++G + R
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E NL+ EML + IPD TY+S +DGL
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGL 335
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F +M +F + K++ +P+ I N L+ G E K+L F+D++V
Sbjct: 52 INCFCHLGQMA---FSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVA 108
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ D V++ IL++G C+ + A+ L R + ++ P+VV ++T+I G ++ DE
Sbjct: 109 QGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDE 168
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM G +T L+ G C G++++A L+ + + + P + Y L++
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC EG + ++ + KKG P V+ + L++G + + +A + M++ G+ P
Sbjct: 229 TLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNP 288
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D ++N ++ LC R +A L K + PD +TY L+ G + R +L
Sbjct: 289 DVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLT 348
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
EM G +L TYNS +DGL
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGL 370
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 148/298 (49%), Gaps = 8/298 (2%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF + ++I + P++ YN LI+ K + ++ M + VKPDVV ++IL+
Sbjct: 204 AFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMD 263
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+C + A +F M + G NP+V S+N +I G ++ DE +N+ EM+
Sbjct: 264 GYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP 323
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+VT L+DGLC GR+ +L + RG Y L++ LC N A+ +
Sbjct: 324 DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383
Query: 354 DELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ ++G P+ T LI+GL RL+KG L + +L +G D T+ ++ L
Sbjct: 384 MKMKERGIQPNKYTYTALIDGLCKGGRLKKG---QALFQHLLVKGYCIDVWTYTVMISGL 440
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G +A ++ G P+ +T+ I++ ++ + E L++EM+ +G +P
Sbjct: 441 CKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR----- 415
++P +I ++ L +++ L ++M +GI+PD VT + L+ C +G+
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+V L+L G P+ + + L+ G + K+ + ++++ +GF D +Y
Sbjct: 66 SVLGKILKL-----GYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120
Query: 476 YMDGL 480
++GL
Sbjct: 121 LLNGL 125
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 163/328 (49%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K R+ + F+ M+ + +P+ ++ LI+GF K + ++ G + M
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGG-ECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM 225
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++ DV ++ LISGFC + LF EM K PNVV+++ L+ ++K+
Sbjct: 226 EKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKW 285
Query: 277 DEGVNMAYEMIELGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E M M GC+ V +L DGL GR A +++ +RG P + Y
Sbjct: 286 KEAAQMLDTMT--GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYN 343
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC EG AL +++ + KKG P V+ +TL++GL + K EA L+ ++ +
Sbjct: 344 AIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK 403
Query: 395 G--ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
I PD FN ++++LC R A R+ +G + +TY+IL+ GY +
Sbjct: 404 EFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLT 463
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L + +D G P+ ATY ++GL
Sbjct: 464 KALELWKDAVDSGISPNAATYTVLINGL 491
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 2/295 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+L+ GF + + KA+ + M R+ + PD V++N +I+G C+ K+ A LF+EM+
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
C PN V+F+ LI GF +EG + EM ++G E L+ G C++G +
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ EL + R+ V P Y L+ LC + A +++D + P V+A T L
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + + +A +++ M+K G P++VT+N ++ LC GR DA + + KG
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF--IPDLATYNSYMDGLSNARK 485
PD +TY LV G + E +L+N ++ + F PD+ +N + L R+
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRR 426
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 198/422 (46%), Gaps = 23/422 (5%)
Query: 83 HHHPQFTHYDFHIFAWAST---IDSFRH-DHTTFLFIVRSLASSYR----FSELHSVLNF 134
H H Y I +++S ID+ R H + V S +S F+ L +++
Sbjct: 44 HFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIES 103
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAV-------NAFVKANRMNDGLLAFEAMRK--LID 185
P G+ M+R FH V F ++ + + F M++ LI
Sbjct: 104 FVNTQKPSFAFGVLGLI-MKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLI- 161
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P YN +ING K + +A + M KP+ VTF+ LI GFC+N +
Sbjct: 162 --PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
GL EM + G +V ++ LI GF + + G + EM+ + VT L++ L
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C + + +A +++ + V P Y L + L G A A++V+D + K+G P+
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRL 424
+ +I GL + + +A G++E M K+G PD VT++ L++ LC VG+ +A D L L
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399
Query: 425 LASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L S + + PD +++++ ++ R + + + M++ GF ++ TYN +DG +A
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSA 459
Query: 484 RK 485
K
Sbjct: 460 GK 461
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 156/341 (45%), Gaps = 5/341 (1%)
Query: 145 DGIFSCPEMERIFHFAV--NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
D + C + + V + K R +D + + M K + P+ YN +ING K
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPNNVTYNAIINGLCK 351
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM--REKGCNPNV 260
D ALG + M + KPDVVT++ L+ G C K D A+ L + +E P+V
Sbjct: 352 EGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDV 411
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
+FN +I+ +R+ + Y M+E G + VT IL+DG + G++ KA EL D
Sbjct: 412 FAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKD 471
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
G+ P Y L+ LC IA + ++ G P+V TL+ L R
Sbjct: 472 AVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESS 531
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L ++M PD V+FN +++ G A L L L PD +T+ I
Sbjct: 532 VEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSI 591
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L++ + + + E +L M+ G +PD ++S + G S
Sbjct: 592 LINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYS 632
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 145/316 (45%), Gaps = 11/316 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +V+ L + E +LN + + D +F+ F+ + K
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPD-VFA-------FNLVIQELCKQ 424
Query: 168 NRMNDGLLAFEAMRKLIDGRPS-VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+ + M + G PS + YN+LI+G++ + KAL + V + P+
Sbjct: 425 RRLRHAKRVYYTMVE--RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAA 482
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ +LI+G C+ + +A GLF + R G P V +NTL+ E ++ N+ EM
Sbjct: 483 TYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM 542
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ V+ I++DG G V A EL+++ ++P + + L+ + G
Sbjct: 543 RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQL 602
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A + + + G++P + +L++G K + ++++M + ++ DS + +
Sbjct: 603 DEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTI 662
Query: 407 LEDLCDVGRTVDADRL 422
L LC++ + VD +++
Sbjct: 663 LACLCNMSKDVDIEKI 678
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 119/300 (39%), Gaps = 36/300 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS S N LI+ K + +D + + +M V P + + LI F +K A G+
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ ++G + NV +FN L++GF C
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGF-----------------------------------CQ 141
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G KA +L R ++P Y ++ LC A E+ E+ P+ +
Sbjct: 142 SGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVT 201
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ LI+G + E GL+E+M K G+ D ++ L+ C G L
Sbjct: 202 FSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEML 261
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS-NARKS 486
K + P+ +TY L++ ++ + KE +++ M PD+ Y DGLS N R S
Sbjct: 262 RKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRAS 321
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
++PS +C TLI+ LR+ + + KM + P + + L+E + + A
Sbjct: 55 SIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAF 114
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L +G + +++L+ G+ + + +L M IPD +YN+ ++GL
Sbjct: 115 GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174
Query: 481 SNARKSVR 488
++ V
Sbjct: 175 CKGKRLVE 182
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 148/292 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV + LI+G + + +A +D M + P V+ + ILI G C + K + A +
Sbjct: 180 PSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESM 239
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R MRE G PNV ++NTL+ G+ + + + +M+ G VT IL+DGLC
Sbjct: 240 HRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCK 299
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A L ++ + V P Y L++ C G+ A+ + EL + P V
Sbjct: 300 FGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFT 359
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ LI GL + + EA + EKM KEGIL +SVT+N L++ C G+ A + +
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G++P+ +T+ L+ GY + + + +EM+ + PD+ TY + +DG
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 1/308 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + N++ + AMR+ + P+V YN L++G+ K +AL Y
Sbjct: 219 VYTILIRGLCSDNKIEEAESMHRAMRE-VGVYPNVYTYNTLMDGYCKLANAKQALRLYQD 277
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + + PDVVTF ILI G C+ + A LF M + PN+ +N+LI +
Sbjct: 278 MLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGD 337
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + E+ T IL+ GLC+ R +A + ++ G+L Y
Sbjct: 338 VSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNS 397
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C EG ALE+ ++ + G P+VI +TLI+G ++R A G+ +M+ +
Sbjct: 398 LIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKS 457
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD VT+ +++ C G +A +L G+ P+ T L+ G ++ + +
Sbjct: 458 LSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDAL 517
Query: 456 NLVNEMLD 463
L E ++
Sbjct: 518 ELFTEKIE 525
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 50/334 (14%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V + +LI+G K E A + M++ V P++ +N LI +C+ A+ L
Sbjct: 285 PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMAL 344
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F E+ +P+V +++ LIRG + +E N+ +M + G +SVT L+DG C
Sbjct: 345 FLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCK 404
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ KA E+ + GV P + L++ C N A+ + E+ K P V+
Sbjct: 405 EGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVT 464
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL----- 422
T +I+G + EA L ML GI P+ T +CLL+ LC G+ DA L
Sbjct: 465 YTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKI 524
Query: 423 -----------------------------------------RLLASTK--GLDPDGMTYH 439
+L + + GL PD + Y
Sbjct: 525 EFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYV 584
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+++ G + + L +ML G IP+ A +
Sbjct: 585 VMLRGLFQ--VKYILMMLHADMLKFGVIPNSAVH 616
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 138/340 (40%), Gaps = 73/340 (21%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
LAF + +L + + ++Y LI K ++AL Y ++ + N+L+
Sbjct: 100 LAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYV 156
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+ +F+L ++ EM G +P+V++F TL
Sbjct: 157 LVKTGRFELLWRIYEEMISNGLSPSVITFGTL---------------------------- 188
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+DG C +G +L+A E+ + +G++P Y L+ LC + A +
Sbjct: 189 -------IDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHR 241
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF----------- 403
+ + G P+V TL++G +L +A L + ML EG++PD VTF
Sbjct: 242 AMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFG 301
Query: 404 ------------------------NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
N L++ C VG +A L L + PD TY
Sbjct: 302 EMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYS 361
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
IL+ G +R +E N+ +M EG + + TYNS +DG
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG 401
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 2/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + + D + F+ M G P YN+LI+ + R+ +AL +++M
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VKP +VT++ L+ +C N D A+ L+ EM KG PNVV++ TL++G + F
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM + G + T L++GLC GRV + E++ F G +P Y +
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G G A V ++ KG P+++ T+ I+G + A ++ + +G+
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +N L+ C G A ++ +L GL P+ Y+ ++GY +E
Sbjct: 593 RPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
L +M+ EG D ATY + +DG S
Sbjct: 653 LYEKMIKEGIDLDTATYTTLIDGFS 677
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+E R++ D PS + +N++I G + + + A+ + M D PD T+NILI
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIH 394
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ +K AL L+ +M E G P +V++++L+ + DE V + EM G
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+ G N+ KA L+ + + GV D+ Y L+ LC G E++
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+G +P+ + ++I G + A + ++M +GI P+ VT+ ++ C
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
A ++ KGL PD Y+ L+ G+ +E ++ ML +G +P+++ Y
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634
Query: 474 NSYMDGLSNAR 484
NS++ G N +
Sbjct: 635 NSFITGYKNLK 645
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 139/322 (43%), Gaps = 35/322 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y L+ G + FDKA M ++ V + T+N LI+G C + +
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +G P +++N++I GF + +M G + VT +DG C
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A +++ D +G+ P Y L+ C EGN AL+V+ + K G LP++
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISV 633
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGI------------------------------- 396
+ I G + L+ EA L EKM+KEGI
Sbjct: 634 YNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693
Query: 397 ----LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+PD +TF L LC G DA +L + + P+ + Y++L++GY R + +
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
E L +EML+ +PD TY+
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYD 775
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
GRP +++V++ K +D A+ +D M ++PD ++ I+ C+ + + A
Sbjct: 172 GRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRA 231
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L + R+M++ G P +FN+++ + +E +++ E++ G + S V L+ G
Sbjct: 232 LLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHG 291
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C + V KA ++ + R G++P D Y L+ EG A E+ ++ G LPS
Sbjct: 292 YCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPS 351
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+I+GL + +A L ++M GI PD+ T+N L+ LC + +A L
Sbjct: 352 TNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWE 410
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G+ P +TYH L+ Y E L EM +GF P++ TY + M G N
Sbjct: 411 KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 121/255 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN +INGF+K A Y +M + P++VT+ I G+C+ DLAL +
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++R KG P++ ++N+LI GF E + + M++ G + + G N
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L + G+ Y L++ +GN AL++ E+ KGN+P I
Sbjct: 644 LKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L GL R +A L+++M + I P+ + +N L+ G+ +A RL
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763
Query: 428 TKGLDPDGMTYHILV 442
+ + PD TY ILV
Sbjct: 764 ERKIMPDDTTYDILV 778
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 3/252 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F+KA M ++ M K I P++ Y I+G+ K D AL +
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIP--PNIVTYTSFIDGYCKTSCCDLALKMLND 586
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ ++PD+ +N LI GFC+ AL + M + G PN+ +N+ I G+ +
Sbjct: 587 VRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKM 646
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + + +MI+ G + + T L+DG +G V A +L + +G +P +
Sbjct: 647 MEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L LC G+ A +++DE+ + P+V+ LI G R K EA L ++ML+
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766
Query: 396 ILPDSVTFNCLL 407
I+PD T++ L+
Sbjct: 767 IMPDDTTYDILV 778
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 1/236 (0%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EMR KG + F+ ++R F E +D+ V + EM E C + + LC
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+A ++ G +P DF + +V+ L G AL + DEL G SV+ T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
TL+ G R+ +A + E+ L++G++P VT+ L+ + G A L
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL P +++++ G + K+ +L EM D G IPD TYN + L RK
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRK 401
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 168/366 (45%), Gaps = 40/366 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
++ F N+F+K + GL A+ R L+ P + N ++ G + A F+
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLV---PKIVDCNKILKGLCMGNQIGVASDFF 263
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D MVR P++VTF+ LI+ +C+ + D A L+ M EKG P++V ++ LI G F
Sbjct: 264 DMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRA 323
Query: 274 RKFDEG-----------------------------------VNMAYEMIELGCEFSSVTC 298
K +EG + + M++ G + VT
Sbjct: 324 GKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTY 383
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL++GLC GRVL+AC + ++G+ P Y L++ C N + + +
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLR 443
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG++P V+ C+ LI GL R EA + +K G+ ++ FN L++ + RT D
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRD 503
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
++ +L + PD +TY +LV G + R E L ++L +GF PD Y + +D
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563
Query: 479 GLSNAR 484
G R
Sbjct: 564 GFCKKR 569
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 160/343 (46%), Gaps = 16/343 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAF--EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+F+ ++ + R DGL + M K+I P V Y VL+ G + D+AL +
Sbjct: 487 LFNALIDGCFRLKRTRDGLKMYILMGMYKVI---PDVVTYTVLVKGLAEQGRLDEALALF 543
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++++ PD + + LI GFC+ + L +F+ M+ G P++ +N LI FF E
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFRE 603
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + E+I+ G E VT ++ G C+ KA +L P +
Sbjct: 604 GCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITF 663
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C +G A+ + + ++G P+++ + LI+G + A L EKML
Sbjct: 664 TILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLG 723
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ + P+ V+++ L++ LC G +A A + L PD + Y IL+ GY + R E
Sbjct: 724 DRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAE 783
Query: 454 GENLVNEMLDEGFIPD------LATYNSYMDGLSNARKSVRQT 490
L + ML G +PD LA Y G +++ S+ T
Sbjct: 784 AMMLYDHMLVNGIMPDDLLQKALAEY-----GFQDSQASIYST 821
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 10/328 (3%)
Query: 156 IFHFA----VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
I H+A ++ + ++R++ L +E M K + +Y + N F+K E +K L
Sbjct: 173 ISHYAASEMLDLLIDSDRIDVILENYEEMCK------GLGVYEFVFNSFLKRGEVEKGLN 226
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F+ +V + P +V N ++ G C + +A F M G +PN+V+F+TLI +
Sbjct: 227 FHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYC 286
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + DE ++ MIE G V IL++GL G++ + L RGV
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ G+ G A+EV + K+G P+V+ + LI GL R + +EA G+ ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
LK+G+ P +T++ L++ C D L + KG PD + +L++G +R+
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG 479
E + + G + +N+ +DG
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDG 494
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 38/360 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
IF ++A+V+ + + + M K +G P+V Y++LING + +A G +
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLK--EGISPNVVTYSILINGLCRNGRVLEACGVFG 404
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++++ ++P V+T++ LI GFC+++ GL+ M KG P+VV + LI G +
Sbjct: 405 QILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQG 464
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + ++ ++ G ++ L+DG R ++ I V+P Y
Sbjct: 465 MMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYT 524
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR---------KGVEAS 385
LV+ L +G AL + +L KKG P I TLI+G + R K ++++
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN 584
Query: 386 G--------------------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G L+ +++K G+ PD VT+N ++ C + A
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+L + P+ +T+ IL+ Y ++ R + + + ML+ G P++ TY+ +DG
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 140/329 (42%), Gaps = 35/329 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
PSV Y+ LI+GF K G Y M+R PDVV ++LI+G R D AL
Sbjct: 412 EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALR 471
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F + ++G N FN LI G F ++ +G+ M M VT +LV GL
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG------------------------ 342
+GR+ +A L ++G P Y L++ C
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591
Query: 343 -----------EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
EG LE++ E+ K G P ++ T+I G L+ +A L E +
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
P+++TF L++ C GR DA + +G +P+ +TY L+ GY +
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L +ML + P++ +Y+ +DGL
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGL 740
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 136/305 (44%), Gaps = 19/305 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +V+ LA R E ++ F S D I C ++ F K
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALAL--FFQLLKKGFSPDHIIYCT--------LIDGFCKK 568
Query: 168 NRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
GL F+ M+ +G P + IYNVLIN F + + L +++ ++PD+V
Sbjct: 569 RDPATGLQIFKLMQS--NGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N +I G+C K F A+ LF ++ PN ++F LI + + + D+ + + M
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSM 686
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG-- 344
+E G E + +T L+DG A EL V P Y L++ LC +G
Sbjct: 687 LERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLM 746
Query: 345 -NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
A +A + + LP VIA LI G ++ + EA L + ML GI+PD +
Sbjct: 747 EEASLAFQCA---IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQ 803
Query: 404 NCLLE 408
L E
Sbjct: 804 KALAE 808
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 43/250 (17%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGF 200
++GIF P++ I++ +N F + + + L E +R++I P + YN +I G+
Sbjct: 582 QSNGIF--PDI-CIYNVLINMFFREGCVENVL---ELLREIIKYGLEPDIVTYNTMICGY 635
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
+ F KA+ ++ + R +P+ +TF ILI +C++ + D A+ +F M E+G PN+
Sbjct: 636 CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNI 695
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL--------------- 305
++++ LI G+F + + +M+ + V+ IL+DGL
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQC 755
Query: 306 --------------------CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
C GR+ +A L G++P D L E +
Sbjct: 756 AIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQ 815
Query: 346 AGIALEVVDE 355
A I V E
Sbjct: 816 ASIYSTVFPE 825
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 4/310 (1%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +R+ +DG+ P+V +YN +I+ K + ++A Y MV + PDVVT++ LI
Sbjct: 180 ALQLLRR-VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SGFC K + A+GLF +M + NP+V +F+ L+ GF E + E N+ M++ G +
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
VT L+DG C +V KA + ++ GV Y ++ C A+ +
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ K +P V+ +LI+GL + K A L+++M G+ D +T+N +L+ LC
Sbjct: 359 FKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCK 418
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L +G+ PD TY IL+ G + R K+ +N+ ++L +G+ + T
Sbjct: 419 NHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYT 478
Query: 473 YNSYMDGLSN 482
Y + G +
Sbjct: 479 YTVMIQGFCD 488
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 167/320 (52%), Gaps = 5/320 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
+++ +++ K +N+ AF+ +++ P V Y+ LI+GF + + A+G +
Sbjct: 198 MYNTIIDSMCKVKLVNE---AFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLF 254
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M+ + + PDV TF+IL+ GFC+ + A + M ++G P+VV++ +L+ G+
Sbjct: 255 NKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLV 314
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ ++ M + G + + I+++G C +V +A L + + ++P Y
Sbjct: 315 KQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTY 374
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G AL++VDE+ +G I ++++ L + + +A L+ KM
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 434
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
EGI PD T+ L++ LC GR DA + KG + TY +++ G+ + +
Sbjct: 435 EGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDK 494
Query: 454 GENLVNEMLDEGFIPDLATY 473
L+++M D G IP+ TY
Sbjct: 495 ALALLSKMEDNGCIPNAKTY 514
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 148/288 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K + AL R+ V+P+VV +N +I C+ K + A L+ EM
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +P+VV+++ LI GF K ++ + + +MI T ILVDG C EGRV
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ ++G+ P Y L++ C A + + + + G +V + +I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++K EA L ++M + I+PD VT+N L++ LC G+ A +L +G+
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ ++ + ++ + L+ +M DEG PD+ TY +DGL
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 154/337 (45%), Gaps = 35/337 (10%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I+ P + + ++ VK + A+ + M + + D+VTFNILI+ F +
Sbjct: 50 INPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHF 109
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+ +F + +KG PN ++ TLI+G + + + ++ +++ LG + V L++
Sbjct: 110 SFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLIN 169
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC G+ A +L+ + V P Y +++ +C A ++ E+ KG P
Sbjct: 170 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 229
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ + LI G L K +A GL KM+ E I PD TF+ L++ C GR +A +
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289
Query: 424 LLASTKGLDPDGMT-----------------------------------YHILVSGYTRE 448
+ +G+ PD +T Y+I+++G+ +
Sbjct: 290 AMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKI 349
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ E NL EM + IPD+ TYNS +DGL + K
Sbjct: 350 KKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+V YN++INGF K ++ D+A+ + M + PDVVT+N LI G C++ K AL L
Sbjct: 334 ANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKL 393
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM ++G + +++N+++ + D+ + + +M + G + T IL+DGLC
Sbjct: 394 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A + D +G + Y +++ C AL ++ ++ G +P+
Sbjct: 454 GGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKT 513
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+I L + A L+ +M+ G+L
Sbjct: 514 YEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N F K ++++ + F+ M + +I P V YN LI+G K + AL D
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNII---PDVVTYNSLIDGLCKSGKISYALKLVD 395
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M V D +T+N ++ C+N + D A+ L +M+++G P++ ++ LI G
Sbjct: 396 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + N+ +++ G + T +++ G C+ KA L+ G +P Y
Sbjct: 456 RLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYE 515
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNL 362
++ L + +A +++ E+ +G L
Sbjct: 516 IIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKA 209
P + ++ ++A K ++++ + M+ +G +P + Y +LI+G K A
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKD--EGIQPDMYTYTILIDGLCKGGRLKDA 460
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
++ ++ V T+ ++I GFC N FD AL L +M + GC PN ++ +I
Sbjct: 461 QNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS 520
Query: 270 FFGERKFDEGVNMAYEMIELGCEF 293
F + + D + EMI G F
Sbjct: 521 LFEKDENDMAEKLLREMIARGLLF 544
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 156/292 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +FD + +RM R+ D+ ++NILI+ FCR + LAL +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ E V + +M + + ++VT L+ GL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ RG P F Y +V LC G+ +AL ++ ++ K V+
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+I+ L + +A L +M +GI P+ VT+N L+ LC+ GR DA RL
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++P+ +T+ L+ + +E + E E L +EM+ PD+ TY+S ++G
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++A +ND L F M K I RP+V YN LI + A
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A ++ ++ G P +I + L++GL + K +A + E + K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ + Y ++SG+ R+ ++E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ TYN+
Sbjct: 555 DALFREMKEDGTLPNSGTYNT 575
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C PNVV++NTLI+GF ++ +EG+ + EM + G ++VT L+ GL
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A ++ GV P Y L++ LC G AL V + L K P +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + + ++ C G +AD L
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ + L+ EM GF+ D +T + ++ L + R
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + +++ L M KL P + + L+NG+ + +A+ D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+P+ VTFN LI G + K A+ L M +GC P++ ++ T++ G
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++D LCN V A L + +G+ P Y L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L+ G+ + R +EG
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM G + + TYN+ + GL A
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQA 443
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 149/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ DVV + +I C K + AL
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG PNVV++N+LIR ++ + + +MIE + VT L+D
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P F Y L+ C A + + + K P+V+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ E L +M + G++ ++VT+N L++ L G A ++
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD +TY IL+ G + + ++ + + PD+ TYN ++G+ A K
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R+++ + + M +++ +P+ +N LI+G + +A+ DRMV
Sbjct: 157 LNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+ T+ +++G C+ DLAL L ++M + +VV + T+I + ++ +
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LCN GR A L+ D R + P + L++
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY+ L+ G + + + +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G PD+ TY+ +DGL
Sbjct: 456 MVSDGVPPDIITYSILLDGL 475
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F ++ L +P+V IY +I+GF + ++A + M
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ T+N LI R+ + L +EMR G
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 166/323 (51%), Gaps = 7/323 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+N K R+ L + K +DG+ P+ +YN++I+ K + + A Y +MV
Sbjct: 173 INGLCKVGRITAAL----QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
R+ PDV T+N LISGF K + A+ LF +M+++ NPNV +FN L+ GF E K +
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVN 288
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + M++ + VT L+DG C+ +V KA ++ + GV+ Y +V
Sbjct: 289 DAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMV 348
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C A+ + +E+ + +P+V+ ++LI+GL +L + A L+++M G
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VT++ +L+ LC A L +G+ PD TY IL+ G + R ++ +N+
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
++L +G+ D+ Y + G
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGF 491
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 164/320 (51%), Gaps = 5/320 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFY 213
+++ ++ KA +ND AF+ +++ R P V YN LI+GF + + A+ +
Sbjct: 203 MYNMIIDNMCKAKLVND---AFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M ++ + P+V TFNIL+ GFC+ K + A + M + P+VV++N+L+ G+
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K ++ ++ M G + +V+G C V +A L + R ++P Y
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G AL++VDE+ +G P+++ +++++ L + +A L+ +
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKD 439
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI PD T+ L++ LC GR DA + KG + D Y +++ G+ + +
Sbjct: 440 QGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Query: 454 GENLVNEMLDEGFIPDLATY 473
L+++M D G IP+ TY
Sbjct: 500 ALALLSKMEDNGCIPNAKTY 519
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 2/318 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
CP++ ++ ++ F +++N + F M+K + P+V +N+L++GF K + + A
Sbjct: 233 CPDV-FTYNALISGFSAVSKLNYAIDLFNKMKKE-NINPNVYTFNILVDGFCKEGKVNDA 290
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M++D +KPDVVT+N L+ G+C K + A +F M G NV + T++ G
Sbjct: 291 KVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNG 350
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + DE +N+ EM + VT L+DGLC GR+ A +LV + RG P
Sbjct: 351 FCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPN 410
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y +++ LC + A+ ++ L +G P + T LI+GL + + +A + E
Sbjct: 411 IVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFE 470
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+L +G D + +++ CD G A L G P+ TY +++ ++
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKD 530
Query: 450 RRKEGENLVNEMLDEGFI 467
E L+ EM+ G +
Sbjct: 531 ENDTAEKLLREMIVRGLL 548
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 142/292 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N +++ VK + AL + +M + ++ D TFNILI+ F + L+ +F ++
Sbjct: 64 FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+KG +P ++FNTLI+G + + ++ +++ G V+ L++GLC GR+
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ + V P Y +++ +C A ++ ++ K P V LI
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + K A L KM KE I P+ TFN L++ C G+ DA + + +
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
PD +TY+ L+ GY N+ + +++ + M G I ++ Y + ++G +
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIK 355
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 35/263 (13%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P FN ++S + K AL L ++M G + +FN LI F
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCF------------ 106
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+LG +S++ I ++LK +G P + L++ LC
Sbjct: 107 ----SQLG--LNSLSFSIF-------AKILK----------KGYHPTAITFNTLIKGLCL 143
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+G+ AL D++ +G ++ TLI GL ++ + A L++++ + + P++V
Sbjct: 144 KGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVM 203
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N +++++C DA L K + PD TY+ L+SG++ ++ +L N+M
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK 263
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
E P++ T+N +DG K
Sbjct: 264 KENINPNVYTFNILVDGFCKEGK 286
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 143/292 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P ++NVL+ V+ E A +D M V+ VV+FN +ISG CR D A L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M E G P+V ++ LI+G + ++ + +M G + ++V IL+D C
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G EL + RGV P Y +V LC + A +V E+ G P +
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + + A + + M+ EG+ D VT+ L+ L GR+ DA+R+
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL+PD TY +++ + R+ K G L+ EM ++G P + TYN M+G
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 1/329 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P ++F+ + V+ + F+ M+ R VS +N +I+G + + D A
Sbjct: 113 PPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS-FNTMISGMCRAGDLDGAE 171
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ RM V PDV T+ LI G CR + + A G+F +M +G PN V F LI
Sbjct: 172 TLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAH 231
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + + + EM E G +VT +V+GLC + A +V++ G+ P
Sbjct: 232 CKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 291
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ C E +A+E+ + +G + T LI GL + + +A ++ +
Sbjct: 292 VTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGE 351
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M++ G+ PD+ T+ +++ C G RL KG P +TY+++++G+ + +
Sbjct: 352 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 411
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K + L+N M++ G PD TYN +DG
Sbjct: 412 MKNADMLLNAMINIGVSPDDITYNILLDG 440
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y LI G + + A G +++M +KP+ V F ILI C+ + L L
Sbjct: 184 PDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLEL 243
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
REMRE+G P+ V++N ++ G R + EM G +VT L+DG C
Sbjct: 244 HREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCK 303
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + A E+ + GV + Y L+ L G + A V+ E+ + G P
Sbjct: 304 EEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTT 363
Query: 368 CTTLIEGLRRLRKGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
T +I+ RKG +GL +++M +G P VT+N ++ C +G+ +AD L
Sbjct: 364 YTMVIDAF--CRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNA 421
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G+ PD +TY+IL+ G+ + + + E L + +G +PDL Y S
Sbjct: 422 MINIGVSPDDITYNILLDGHCKHGKVTDIEELKSA---KGTVPDLGVYTS 468
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + R+ D FE M R + +P+ ++ +LI+ K + + L + M
Sbjct: 193 IQGLCRVGRIEDARGVFEKMCGRGM---KPNAVVFTILIDAHCKKGDAETMLELHREMRE 249
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V+PD VT+N +++G CR + A G+ EMR G P+ V++ TLI G+ E + D
Sbjct: 250 RGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDM 309
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + M+ G VT L+ GL GR A ++ + G+ P + Y +++
Sbjct: 310 AMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVID 369
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G+ L ++ E+ KG P V+ ++ G +L + A L+ M+ G+ P
Sbjct: 370 AFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 429
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
D +T+N LL+ C G+ D + L+ S KG PD Y +V ++ K
Sbjct: 430 DDITYNILLDGHCKHGKVTDIEELK---SAKGTVPDLGVYTSIVGEIVKKKTTK 480
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A FY +++ + P+ FN+L+ R + A +F EM+ +G VVSFNT+I
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G D + M E G T L+ GLC GR+ A + RG+
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + L++ C +G+A LE+ E+ ++G P + ++ GL R R ASG+
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M G+ PD+VT+ L++ C A ++ +G+ D +TY L+SG ++
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
R + E ++ EM++ G PD TY +D
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVID 369
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 32/209 (15%)
Query: 308 EGRVLKACELVIDFSRRGV-------------------------------LPKDFDYFG- 335
EG + AC LV+ RRG+ LP + F
Sbjct: 62 EGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNV 121
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L G A V DE+ +G +V++ T+I G+ R A L +M + G
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L++ LC VGR DA + +G+ P+ + + IL+ + ++ +
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 241
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM + G PD TYN+ ++GL AR
Sbjct: 242 ELHREMRERGVRPDAVTYNAIVNGLCRAR 270
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 198/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH + ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ J+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D+ + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + + P Y L+ LC +G+
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A ++DE+ KG P I TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ JA V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLSPDLITYNTLIYGL 292
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 181/433 (41%), Gaps = 65/433 (15%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIF 157
T+ IVRSL + ++ +VL+ + C C G S ++
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169
Query: 158 H------------FAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKC 203
H V+A + +++G+ E +RKL P + YN ++ G
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGV---ELLRKLPSFGCEPDIVSYNAVLKGLCMA 226
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP----- 258
+ +D MVR P+V TFN LI+ CRN F+ +M E GC P
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMY 286
Query: 259 ------------------------------NVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
NVV +NT+++G +++E ++ EM +
Sbjct: 287 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 346
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
C VT ILVD C G V + EL+ G +P Y ++ C EG
Sbjct: 347 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 406
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A+ ++ + G P+ I+ T +++GL R + V+A L+ M+++G LP+ VTFN L+
Sbjct: 407 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN 466
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
+C G A L G PD ++Y ++ G + + +E L+N M+++G P
Sbjct: 467 FMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 526
Query: 469 DLATYNSYMDGLS 481
+ Y+S LS
Sbjct: 527 NTIIYSSMASALS 539
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 150/296 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN ++ G +++A M ++ D VTFNIL+ FC+N D +
Sbjct: 315 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE 374
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E GC P+V+++ T+I GF E DE V + M GC+ ++++ I++ GLC
Sbjct: 375 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 434
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R + A EL+ ++G LP + L+ +C +G A+E++ ++ G P +I
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLI 494
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +T+I+GL + K EA L+ M+ +GI P+++ ++ + L GRT ++
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 554
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ D Y+ ++S + + M+ G +P+ +TY + GL++
Sbjct: 555 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLAS 610
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 4/303 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +Y +I+G K + A RM +KP+VV +N ++ G C ++++ A L
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 340
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM ++ C + V+FN L+ F D + + +M+E GC +T +++G C
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 400
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG V +A L+ + S G P Y +++ LC A E++ + ++G LP+ +
Sbjct: 401 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT 460
Query: 368 CTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
TLI + +KG+ +A L+++ML G PD ++++ +++ L G+T +A L +
Sbjct: 461 FNTLINFM--CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ P+ + Y + S +RE R + + + + D D A YN+ + L +
Sbjct: 519 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 578
Query: 486 SVR 488
+ R
Sbjct: 579 TDR 581
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 112/261 (42%), Gaps = 3/261 (1%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VV +N +I+G+CR + A L + PN ++ ++R + + +
Sbjct: 76 VVAYNAMIAGYCRAGQVAAARRLAAAVPVP---PNAYTYFPIVRSLCARGLIADALTVLD 132
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
EM GC + C ++++ C G A + +G + +V +C +G
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+E++ +L G P +++ +++GL ++ + LM +M++ G P+ TFN
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFN 252
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ LC G G PD Y ++ G ++ + ++++ M
Sbjct: 253 TLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY 312
Query: 465 GFIPDLATYNSYMDGLSNARK 485
G P++ YN+ + GL +A +
Sbjct: 313 GLKPNVVCYNTVLKGLCSAER 333
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N K + + + M L++G P + Y+ +I+G K + ++AL +
Sbjct: 461 FNTLINFMCKKGLVEQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + P+ + ++ + S R + D + +F +++ + +N +I +
Sbjct: 519 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 578
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYF 334
D ++ M+ GC + T IL+ GL +EG V +A +L+ + SRR V +F
Sbjct: 579 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHF 638
Query: 335 GLV 337
G+V
Sbjct: 639 GIV 641
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +N LIN K ++A+ +M+ + PD+++++ +I G + K + AL L
Sbjct: 456 PNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 515
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M KG PN + ++++ E + D+ + M + + + ++ LC
Sbjct: 516 LNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 575
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+A + G +P + Y L+ L EG A +++ EL +
Sbjct: 576 RWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 192/409 (46%), Gaps = 54/409 (13%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T +V +L +F ++ S L+ + N GI++ +M ++ + A+ +
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGN-------GIYA--DMV-TYNTLIGAYCR---- 165
Query: 171 NDGLL--AFEAMRKLIDG--RPSVSIYNVLINGFVK------------------------ 202
+GLL AFE M + D +PS+ YN +ING K
Sbjct: 166 -EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 224
Query: 203 ---------CRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
CR F +A + M+R V PD+V+F+ LI+ F RN+ D AL FR+M
Sbjct: 225 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM 284
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++ G P+ V + L+ G+ E + + EM+E GC + +++GLC E +
Sbjct: 285 KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 344
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A +L + RG LP + + L+ C +GN AL + + ++ P ++A TL
Sbjct: 345 TDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTL 404
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+G ++ + +AS L + M+ I P+ +T+ L+ C VG +A RL + KG+
Sbjct: 405 IDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 464
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P +T + ++ GY R + + + M+ +G PD +YN+ ++G
Sbjct: 465 KPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGF 513
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 164/326 (50%), Gaps = 7/326 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F + ++ L+ F M+K P IY VL++G+ + +AL D M
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKF-GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ DV+ +N +++G C+ K A LF EM E+G P+ +F TLI G +
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNM 379
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +++ M + + V L+DG C G + KA EL R + P Y L
Sbjct: 380 TKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGIL 439
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G+ A + D + +KG P+++ C T+I+G R +A + +M+ +G+
Sbjct: 440 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGV 499
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLAS---TKGLDPDGMTYHILVSGYTRENRRKE 453
PD +++N L+ R + D+ L + +GL PD +TY+++++G+ R+ R +E
Sbjct: 500 APDHISYNTLINGFV---REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQE 556
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
E ++ +M+++G PD +TY + ++G
Sbjct: 557 AELVLRKMIEKGINPDRSTYTALING 582
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 167/334 (50%), Gaps = 7/334 (2%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK---LIDGRPSVSIYNVLINGFVKCRE 205
+C +F + +V+A ++ +G AF +R L+ S++ N L+ G VK
Sbjct: 43 NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLV----SINACNSLLGGLVKIDW 98
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+ A + +VR ++ +V T NI+++ C++ KFD EM G ++V++NT
Sbjct: 99 VELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT 158
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI + E +E + M + G + S T +++GLC +GR +A ++I+ G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y L+ + C N A E+ E+ ++G +P +++ ++LI R R +A
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
M K G++PD+V + L+ C G ++A ++R +G D + Y+ +++G
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E + + L +EM++ G +PD T+ + + G
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 372
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA+E R+++ +++Y N+++N K +FD F M + + D+VT+N LI
Sbjct: 101 LAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLI 160
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+CR + A + M +KG P++ ++N +I G + ++ + EM+ +G
Sbjct: 161 GAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLS 220
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T L+ C +A E+ + R+GV+P + L+ + AL
Sbjct: 221 PDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVY 280
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ K G +P + T L+ G R +EA + ++ML++G + D + +N +L LC
Sbjct: 281 FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 340
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
DAD+L +G PD T+ L+ G+ ++ + +L M PD+
Sbjct: 341 EKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVA 400
Query: 473 YNSYMDGL 480
YN+ +DG
Sbjct: 401 YNTLIDGF 408
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 115/289 (39%), Gaps = 17/289 (5%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+++ FV+ R A RM+R V L+S C N
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGN----------------- 43
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C N + F+ LIR + RK EG + G S C L+ GL V A
Sbjct: 44 CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
E+ + R G+ + +V LC +G + E+ G ++ TLI
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R EA +M M +G+ P T+N ++ LC GR A + + GL PD
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
TY+ L+ R + E + + EML +G +PDL +++S + S R
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNR 272
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
DG EME KA+ + DG+++ RK+ P+ Y +LIN +
Sbjct: 406 DGFCKVGEME-----------KASELWDGMIS----RKIF---PNHITYGILINAYCSVG 447
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+A +D M+ +KP +VT N +I G+CR+ A M KG P+ +S+N
Sbjct: 448 HVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYN 507
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI GF E D+ +M + G +T ++++G C +GR+ +A ++ +
Sbjct: 508 TLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEK 567
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G+ P Y L+ + N A DE+ ++G P
Sbjct: 568 GINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +NA+ +++ ++ M K I +P++ N +I G+ + + KA F R
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEKGI--KPTLVTCNTVIKGYCRSGDSSKADEFLGR 493
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ V PD +++N LI+GF R D A +M ++G P+++++N ++ GF + +
Sbjct: 494 MIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGR 553
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E + +MIE G T L++G + + +A + +RG P D
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
L KG L S+ AC +L+ GL ++ A + ++++ GI + T N ++ LC G+
Sbjct: 74 LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK 133
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
D G+ D +TY+ L+ Y RE +E ++N M D+G P L TYN+
Sbjct: 134 FDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193
Query: 476 YMDGLSNARKSVR 488
++GL + R
Sbjct: 194 IINGLCKKGRYAR 206
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N FV+ + M+ L M K +G P + YNV++NGF + +A +
Sbjct: 506 YNTLINGFVREDNMDKAFLWINKMEK--EGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
M+ + PD T+ LI+G + A EM ++G P+ V
Sbjct: 564 MIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 158/305 (51%), Gaps = 4/305 (1%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFD--KALGFYDRMVRDRVKPDVVTFNILISGF 235
EA L + P + YN +++ C EF + + MV+ ++P+VVT+ ++ F
Sbjct: 157 EARGFLAETVPVQASYNAVVHAL--CGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAF 214
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ ++ +A + M GC PNV++F L++GFF + K + ++M + M++ G S+
Sbjct: 215 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 274
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
++ +L+ GLC G + A + R +LP Y LV+ G+ A+ + +E
Sbjct: 275 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 334
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ G P+V+ T +I+ L + +A L++KML + P++VTFN L+ LCD GR
Sbjct: 335 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 394
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A + G P+ TY+ L+ G RE K+ +V EML+ GF L TYN+
Sbjct: 395 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 454
Query: 476 YMDGL 480
++ L
Sbjct: 455 VINCL 459
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 9/323 (2%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
A+ AF +A + L F L P V +YN L++ ++ + YD M +
Sbjct: 39 AIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKA 98
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V P+V T+N+LI C+N + D A + EM KGC+P+ VS T++ G + +E
Sbjct: 99 GVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 158
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
E + + +++V V LC E R+ + +V + +RG+ P Y +V+
Sbjct: 159 RGFLAETVPVQASYNAV-----VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C +A ++ + G P+V+ T L++G K +A + M+ EG P
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENL 457
++++N L+ LC +G A L S K L P+ TY LV G++ +
Sbjct: 274 TISYNVLIRGLCCIGDLKGA--LDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLI 331
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
NEM G P++ Y + +D L
Sbjct: 332 WNEMKSSGCKPNVVVYTNMIDVL 354
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 5/320 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYD 214
F V F + +++D L + M +D PS YNVLI G + AL F++
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWM---VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 298
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ + P+ T++ L+ GF D A+ ++ EM+ GC PNVV + +I +
Sbjct: 299 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 358
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
FD+ ++ +M+ C ++VT L+ LC+ GRV +A + R G P D Y
Sbjct: 359 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 418
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EGN A +V E+ G S++ T+I L ++ A L+ +M+ +
Sbjct: 419 ELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ 478
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD+ TFN ++ C G+ A L + + + Y IL+S + +
Sbjct: 479 GIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNA 538
Query: 455 ENLVNEMLDEGFIPDLATYN 474
+ +ML EG P+ AT+N
Sbjct: 539 MVYLLKMLYEGICPNEATWN 558
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ F A ++ +L + M+ +P+V +Y +I+ K FD+A D+M+ D
Sbjct: 316 VDGFSNAGDLDGAMLIWNEMKS-SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VTFN LI C + AL +F MR GC+PN ++N L+ G F E +
Sbjct: 375 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 434
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M EM+ G E S VT +++ LC A L+ +G+ P F + ++
Sbjct: 435 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 494
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG IA ++ ++ +V+A T LI L K A + KML EGI P+
Sbjct: 495 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 554
Query: 401 VTFNCLLEDL 410
T+N L+ +
Sbjct: 555 ATWNVLVRAI 564
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
+CP F+ + R+ L F MR+ +G P+ YN L++G +
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR--NGCHPNDRTYNELLHGLFREGNHK 431
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A M+ + + +VT+N +I+ C+ A+ L M +G P+ +FN +I
Sbjct: 432 DAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAII 491
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ E K + +M + C + V IL+ LCN+G++ A ++ G+
Sbjct: 492 HAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC 551
Query: 328 PKDFDYFGLVEKL 340
P + + LV +
Sbjct: 552 PNEATWNVLVRAI 564
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L E G + V D + K G P+V LI L + + A ++++M
Sbjct: 72 YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 131
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G PD V+ ++ +C +GR +A LA T P +Y+ +V E R
Sbjct: 132 RKGCHPDEVSHGTIVSGMCKLGRVEEARGF--LAETV---PVQASYNAVVHALCGEFRMW 186
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E ++VNEM+ G P++ TY + +D AR+
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 219
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R ++ G +P +N +I+ + K + A +M +VV + ILIS C
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 533
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
K A+ +M +G PN ++N L+R F
Sbjct: 534 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 150/296 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K + +D + + M + D+ T+NI+I+ CR +F +AL +
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P+VV+ ++LI GF + V++ +M E+ C+ V ++DG C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A L R GV Y LV LC G A ++ ++ + +P+VI
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI R K +EA E+M++ I PD T+N ++ LC G+ +A ++ L
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TKG PD +TY+ L++G+ + R EG LV EM G + D T+N+ + G A
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQA 362
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 156/315 (49%), Gaps = 8/315 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFV-KCREFDKALGFY 213
I++ ++ F K +N+ L+ F M + DG R YN L+ G R D A
Sbjct: 176 IYNTIIDGFCKTGLVNNALVLFGRMER--DGVRADTVTYNSLVTGLCCSGRRSDAARLMR 233
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D ++RD V P+V+TF LI+ F R KF A + EM + +P+V ++N++I G
Sbjct: 234 DMVMRDIV-PNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMH 292
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE + M+ GC VT L++G C RV + +LV + S+RG++ +
Sbjct: 293 GQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTF 352
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ G A E+ + G+ P++ + L+ GL + +A L E M K
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQK 409
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ D T+N ++ +C +G DA L S KGL+PD +TY ++SG+ R+ +
Sbjct: 410 SEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDK 469
Query: 454 GENLVNEMLDEGFIP 468
+ L +M ++G +P
Sbjct: 470 ADFLYRKMQEDGLLP 484
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + +R L M K P V + LINGF + A+ +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R K DVV +N +I GFC+ + AL LF M G + V++N+L+ G +
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +M+ + +T L++ EG+ L+A + + RR + P F Y +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++D + KG P V+ TLI G + ++ E + L+ +M + G+
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGL 345
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ D+VTFN +++ GR D + + S G P+ TY IL+ G R ++
Sbjct: 346 VVDTVTFNTIIQGYFQAGR---PDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALV 402
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L M D+ TYN + G+
Sbjct: 403 LFESMQKSEMELDITTYNIVIHGM 426
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 161 VNAFVKANRM---NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+N F + NR+ D + E MR +D V IYN +I+GF K + AL + RM
Sbjct: 146 INGFCQGNRVFGAVDLVSKMEEMRCKLD----VVIYNTIIDGFCKTGLVNNALVLFGRME 201
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
RD V+ D VT+N L++G C + + A L R+M + PNV++F LI F E KF
Sbjct: 202 RDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFL 261
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E EMI + T ++ GLC G+V +A +++ +G P Y L+
Sbjct: 262 EAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLI 321
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C ++V E+ ++G + + T+I+G + + A + +M G
Sbjct: 322 NGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSR 378
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ T++ LL LC R A L ++ D TY+I++ G ++ +L
Sbjct: 379 PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDL 438
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ +G PD+ TY + + G R
Sbjct: 439 FCSLSFKGLEPDVVTYTTMISGFCRKR 465
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 125/275 (45%), Gaps = 35/275 (12%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D+A+ + M++ R P +V F+ L+S ++K +DL + LF M G ++ ++N
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I +F +++ +M++ G E VT L++G C RV A +LV
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLV------- 162
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
++E+ K V+ T+I+G + A
Sbjct: 163 -------------------------SKMEEMRCK---LDVVIYNTIIDGFCKTGLVNNAL 194
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L +M ++G+ D+VT+N L+ LC GR DA RL + + P+ +T+ L++ +
Sbjct: 195 VLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAF 254
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
RE + E + EM+ PD+ TYNS + GL
Sbjct: 255 VREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 178/404 (44%), Gaps = 71/404 (17%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +NAF K + + F+ ++++ P+ +YN L+NG+VK RE D+A Y+ M
Sbjct: 129 FNTVINAFCKEGNVVEARKLFDGLKEM-GFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 187
Query: 217 VRDRVKPDVVTFNILISG-----------------------------------FCRNKKF 241
+ + PD +TFNIL+SG C +
Sbjct: 188 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 247
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D A+ +M EKG +P++++FN++I + D+ M+ G S TC L
Sbjct: 248 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 307
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GL GR+ +A EL+ +G+ + + L++K G+ A + E+ ++G
Sbjct: 308 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 367
Query: 362 LPSVIACTTLIEGLRR--------------LRKGV---------------------EASG 386
P V+A + I+GL + LRKG+ EA
Sbjct: 368 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 427
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L + M G+LPD T N ++ LC GR A + + GL PD +TY+ L++GY
Sbjct: 428 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 487
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ +NLVN M G PDL TYN + G ++R+ R
Sbjct: 488 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAV 531
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 1/338 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C ++ +NA R +D L F M + P+V +N +IN F K
Sbjct: 85 FHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER-GCNPTVVTFNTVINAFCKEGNVV 143
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A +D + P+ + +N L++G+ + ++ D A L+ EMR+KG P+ ++FN L+
Sbjct: 144 EARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILV 203
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + ++G + ++ LG +I V GLC GR+ +A E ++D +G+
Sbjct: 204 SGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLS 263
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + ++ G A E + G PS C++L+ GL + EA+ L
Sbjct: 264 PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 323
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ +M+++G+ +++ F LL+ G V A L +G+ PD + + + G ++
Sbjct: 324 IGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSK 383
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +E N+ EML +G IP+ YNS + G K
Sbjct: 384 QGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 421
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 126/276 (45%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+AL RM V+P IL R + LF+++ +G P +F+ +I
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF + G ++ + M + CE ++ I+++ C GR A RG
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + ++ C EGN A ++ D L + G P+ I TL+ G ++R+ +A+ L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
E+M K+GI PD +TFN L+ GR D DRL S GL PD + I VSG
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R E + +ML++G P + +NS + S A
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 279
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 11/317 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-----RPSVSIYNVLINGFVKCREFDKAL 210
+F +V+ A R++ EAM L+D PS+ +N +I + + DKA
Sbjct: 233 LFDISVSGLCWAGRLD------EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAF 286
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y MV + P T + L+ G N + A L +M EKG + N ++F L+ F
Sbjct: 287 EAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKF 346
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F ++ EM G V +DGL +G V +A + ++ R+G++P +
Sbjct: 347 FKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNN 406
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
F Y L+ C G AL++ + +G LP + +I GL + + A +
Sbjct: 407 FAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMD 466
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G+ PD +T+N L+ C V+AD L G +PD TY+I + G+ R
Sbjct: 467 MHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRR 526
Query: 451 RKEGENLVNEMLDEGFI 467
+++E++ G +
Sbjct: 527 MNRAVLMLDELVSAGIL 543
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 176 AFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++I+ SV+ + VL++ F K + A + M R + PDVV F+ I
Sbjct: 320 ATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFID 379
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + + A +F EM KG PN ++N+LI GF K +E + + M G
Sbjct: 380 GLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLP 439
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
T +++ GLC +GR+ A + +D + G+ P Y L+ C + A +V
Sbjct: 440 DIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLV 499
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+ ++ G+ P + I G R+ A ++++++ GIL S +F C
Sbjct: 500 NRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIL--SFSFAC 549
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A E++ GV P L + L G+ G ++ ++ ++G P + +
Sbjct: 3 FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 62
Query: 372 IEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
I G RKG G L+ M K P++ +N ++ C GRT DA L +
Sbjct: 63 ILGF--CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 120
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +P +T++ +++ + +E E L + + + GF P+ YN+ M+G R+
Sbjct: 121 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMRE 176
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 2/298 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y LING K A+ M + +P+VV F+ LI C++++ A
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EM KG +PN+V++N+LI G ++ + EM++ T +VD LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG V +A ++V RGV P Y L++ C +A++V D + K + +VI
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI G +++ +A L E+M ++ + P++VT+N L+ LC VGR DA L
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411
Query: 427 STKGLDPDGMTYHILVSGYTRENRR-KEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G PD +TY L S Y +NR + L+ + + PD+ Y + +DG+ A
Sbjct: 412 VARGQIPDLVTYRTL-SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
M +++D + P V N +++ K +A D M+ V+P+VVT+N L+ G C
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D+A+ +F M K C NV+S+NTLI G+ + D+ + + EM ++VT
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ GR+ A L + RG +P Y L + LC + A+ ++ +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + TT+++G+ R + +A L + +G+ P+ T+N ++ LC G
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L + G P+ TY+++ G+ R N L+ EML GF D++T +
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567
Query: 478 DGLSN--ARKSVRQ 489
LS+ +SV+Q
Sbjct: 568 GMLSDDGLDQSVKQ 581
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 152/334 (45%), Gaps = 3/334 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
+F +++ K ++ + F M + G P++ YN LI+G K E+ +
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV ++ PDV T N ++ C+ A + M +G PNVV++N L+ G
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D V + M+ C + ++ L++G C V KA L + SR+ + P Y
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A+ + E+ +G +P ++ TL + L + R +A L++ +
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
PD + +L+ +C G DA L S+KGL P+ TY+I++ G ++ E
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L +EM G P+ TYN G +++R
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS +N L+ K + L +M + PDV T I+I+ C + D A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ + G P+ +F TLIRG E K E +++ +MI G + + VT L++GLC
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A L+ + P + L++ LC + A + E+ KG P+++
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+LI GL +L + + LM +M+ I+PD T N +++ LC G +A + +
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G++P+ +TY+ L+ G+ N + + M+ + + ++ +YN+ ++G
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 359
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%)
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D AL F M K P+ V FN L+ + ++++ +M G T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+++ LC+ RV A + + G P + L+ LC EG G AL + D++ +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+V+ TLI GL ++ A L+ M + P+ V F+ L++ LC + +A
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ TKG+ P+ +TY+ L+ G + K L+NEM+D +PD+ T N+ +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P D+ L+ + + L + ++ G P V +I L L + A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ K+LK G PD+ TF L+ LC G+ +A L +G P+ +TY L++G +
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M P++ +++ +D L R+
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 203/467 (43%), Gaps = 57/467 (12%)
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ QI + + +K++ +D A A + FRH H TF ++ L S+ F
Sbjct: 10 SKQIGSAQVAQLIKAERDIQKAIVIFDS---ATAEYTNGFRHSHQTFSLMISRLVSANHF 66
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID 185
+L + C + D IF A+ + ++ D + F M++ +
Sbjct: 67 RLAEELLCRMKEEKCNITED----------IFLSICRAYGRVHKPLDAVRVFRKMKEY-E 115
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK-KFDLA 244
PS Y + V + AL FY M + P V + N+LI C+N D A
Sbjct: 116 CEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAA 175
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +FREM +GC P+ ++ TLI G K E + EM C + VT L+ G
Sbjct: 176 LRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHG 235
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC + A L+ + + +G+ P F Y L++ C G + ALE++D + + +LP+
Sbjct: 236 LCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPN 295
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD---- 420
+I +TL+ GL + K EA ++++M +G+ PD+ + ++ CD+ + +A
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLD 355
Query: 421 -------------------------------------RLRLLASTKGLDPDGMTYHILVS 443
+L L T+G+ D T+ LV+
Sbjct: 356 EMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVN 415
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ + + +LV+EM+ +G IPD T+N+ + + RK VR++
Sbjct: 416 YFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRK-VRES 461
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 8/210 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y+ L++G K +AL D MV R P+++T++ L+ G C+ K A+
Sbjct: 258 KPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVE 317
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE------- 299
+ M+ +G P+ + +I GF KF E N EM+ G + +T
Sbjct: 318 ILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHN 377
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I+V GLC E +A +L + RG+ + LV C +G+ A +VDE+
Sbjct: 378 IVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLD 436
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLME 389
G +P + ++ RK E++ L++
Sbjct: 437 GCIPDEVTWNAVVCAFWDRRKVRESAELVQ 466
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ K ++ + + + M KL RP +Y +I+GF +F +A F D MV
Sbjct: 303 VHGLCKEGKLQEAVEILDRM-KLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGG 361
Query: 221 VKPDVVTF-------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ P+ +T+ NI++ G C + + A L+ MR +G + + +F++L+ F +
Sbjct: 362 ISPNRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNK 420
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ ++ EM+ GC VT +V + +V ++ ELV
Sbjct: 421 GDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELV 465
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 156/292 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +FD + +RM R+ D+ ++NILI+ FCR + LAL +
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ E V + +M + + ++VT L+ GL
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ RG P F Y +V LC G+ +AL ++ ++ K V+
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+I+ L + +A L +M +GI P+ VT+N L+ LC+ GR DA RL
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++P+ +T+ L+ + +E + E E L +EM+ PD+ TY+S ++G
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 353
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++A +ND L F M K I RP+V YN LI + A
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 418
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A ++ ++ G P +I + L++GL + K +A + E + K
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ + Y ++SG+ R+ ++E
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ TYN+
Sbjct: 539 DALFREMKEDGTLPNSGTYNT 559
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 366
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C PNVV++NTLI+GF ++ +EG+ + EM + G ++VT L+ GL
Sbjct: 367 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 426
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A ++ GV P Y L++ LC G AL V + L K P +
Sbjct: 427 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 486
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + + ++ C G +AD L
Sbjct: 487 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 546
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ + L+ EM GF+ D +T + ++ L + R
Sbjct: 547 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 603
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + +++ L M KL P + + L+NG+ + +A+ D+M
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+P+ VTFN LI G + K A+ L M +GC P++ ++ T++ G
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++D LCN V A L + +G+ P Y L
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 340
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L+ G+ + R +EG
Sbjct: 341 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 400
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM G + + TYN+ + GL A
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQA 427
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 149/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ DVV + +I C K + AL
Sbjct: 201 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 260
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG PNVV++N+LIR ++ + + +MIE + VT L+D
Sbjct: 261 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 320
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P F Y L+ C A + + + K P+V+
Sbjct: 321 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 380
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ E L +M + G++ ++VT+N L++ L G A ++
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD +TY IL+ G + + ++ + + PD+ TYN ++G+ A K
Sbjct: 441 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R+++ + + M +++ +P+ +N LI+G + +A+ DRMV
Sbjct: 141 LNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 199
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+ T+ +++G C+ DLAL L ++M + +VV + T+I + ++ +
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 259
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LCN GR A L+ D R + P + L++
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 379
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY+ L+ G + + + +
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G PD+ TY+ +DGL
Sbjct: 440 MVSDGVPPDIITYSILLDGL 459
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F ++ L +P+V IY +I+GF + ++A + M
Sbjct: 487 YNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 545
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ T+N LI R+ + L +EMR G
Sbjct: 546 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 149/299 (49%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V+ +N +++ + + ++ ++++ + + T NI I G C + + + A+ L
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL 268
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M P+VV++NTL+RG + K E M+ GC T ++DG C
Sbjct: 269 VERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A EL+ D +G +P Y L+ LC EG+ ALE+ +E K P ++
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVV 387
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++GL R + A +M +M++EG PD T+N ++ LC +G DA + A
Sbjct: 388 YNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI 447
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KG PD T++ L+ GY + + LV M G PD+ TYNS ++GL A K+
Sbjct: 448 VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 143/296 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LING + ++AL ++ +KPD+V +N L+ G CR AL +
Sbjct: 348 PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E+GC+P++ ++N +I G + + + I G T L+DG C
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ A +LV G+ P Y ++ LC G A E +E+ KG P+ I
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 527
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIE ++ + EASG++ +M ++G++PD+V+FN L+ C G A L
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG T++IL+ Y+ + + E + EM+ +G+ PDL TY +DGL A
Sbjct: 588 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKA 643
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 155/325 (47%), Gaps = 6/325 (1%)
Query: 159 FAVNAFVKA----NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F N +++ R+ + + E M + P V YN L+ G K + +A +
Sbjct: 247 FTCNIWIRGLCEDGRLEEAVALVERMGAYV--APDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM+ PD T+N +I G+C++ A L ++ KG P+ V++ +LI G E
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + E + V LV GLC +G +L A +++ + G P + Y
Sbjct: 365 DIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYN 424
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC GN A V+++ KG LP V TLI+G + K A L+E+M
Sbjct: 425 IIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY 484
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD +T+N +L LC G+ + + KG P+ +TY+IL+ + + N+ +E
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
++ M +G +PD ++N+ + G
Sbjct: 545 SGVIVRMCQDGLVPDAVSFNTLIHG 569
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 177/382 (46%), Gaps = 18/382 (4%)
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFH 158
ASTI ++R ++R L S+ R ++ + L ++ P S ++ ++
Sbjct: 32 ASTIPAYRA-------LIRELVSAGRLDDVDAALASARSHLAPDS---------LQPLYV 75
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ A+ +A R+ + AFE M L P+ YN +++ V D+A Y RM+
Sbjct: 76 ASIQAYARAGRLRAAVDAFERM-DLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLA 134
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
V PD T + + FC + +AL L R + E+GC+ ++ T++RG +
Sbjct: 135 AGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYN 194
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM+ T ++ LC +G V+++ L+ +RG+ F +
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC +G A+ +V+ + P V+ TL+ GL + K EA+ + +M+ +G +P
Sbjct: 255 GLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N +++ C G +A L A KG PD +TY L++G E + L
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
NE + PDL YNS + GL
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGL 395
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D +P + +YN L+ G + AL + MV + PD+ T+NI+I+G C+ A
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ + KG P+V +FNTLI G+ K D + + M G +T +++G
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC G+ + E + +G P Y L+E C A V+ + + G +P
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ TLI G R A L +K+ ++G + TFN L+ A+++
Sbjct: 560 AVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 619
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+KG PD TY ILV G + + EM+ +GF+P +AT+ ++ L+
Sbjct: 620 EMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 9/241 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N KA + + FE M ++ G RP+ YN+LI F K + ++A G R
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEM--ILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +D + PD V+FN LI GFCRN D A LF+++ EKG + +FN LI + +
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ EMI G + T ILVDGLC V +A + + +G +P +
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGR 670
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-LMEKMLKE 394
++ L A+ ++ + + G +P V+ L +K + A L+E+++K+
Sbjct: 671 MLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTI-----LSTDKKEIAAPKILVEELMKK 725
Query: 395 G 395
G
Sbjct: 726 G 726
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 11/321 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N K ++D + ++ G P V +N LI+G+ K + D AL +R
Sbjct: 423 YNIIINGLCKMGNISDAAVVMN--DAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + PDV+T+N +++G C+ K F EM KGC PN +++N LI F +
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M + G +V+ L+ G C G + A L +G +
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + N +A ++ E+ KG P + L++GL + A + +M+ +G
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+P TF +L L R +A + + G+ P+ ++S T + +
Sbjct: 661 FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPE--VVDTILS--TDKKEIAAPK 716
Query: 456 NLVNEMLDEGFIPDLATYNSY 476
LV E++ +G I +Y +Y
Sbjct: 717 ILVEELMKKGHI----SYRAY 733
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 197/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D+ + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++ E+ KG P I TTLI+G + A +M++E I D V + L+
Sbjct: 301 ANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +P
Sbjct: 361 GLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L M G
Sbjct: 148 LMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+ +T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN + GL
Sbjct: 268 EIYKQMLSQSLLPDLITYNXLIYGL 292
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 155/325 (47%), Gaps = 2/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + + D + F+ M G P YN+LI+ + R+ +AL +++M
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VKP +VT++ L+ +C N D A+ L+ EM KG PNVV++ TL++G + F
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM + G + T L++GLC GRV + E++ F G +P Y +
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G G A V ++ KG P+++ T+ I+G + A ++ + +G+
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +N L+ C G A ++ +L GL P+ Y+ ++GY +E
Sbjct: 593 RPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
+M+ EG D ATY + +DG S
Sbjct: 653 FYEKMIKEGIDLDTATYTTLIDGFS 677
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+E R++ D PS + +N++I G + + + A+ + M D PD T+NILI
Sbjct: 336 AYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMA-DSGIPDAFTYNILIH 394
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ +K AL L+ +M E G P +V++++L+ + DE V + EM G
Sbjct: 395 WLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTP 454
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+ G N+ KA L+ + + GV D+ Y L+ LC G E++
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML 514
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+G +P+ + ++I G + A + ++M +GI P+ VT+ ++ C
Sbjct: 515 KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKT 574
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
A ++ KGL PD Y+ L+ G+ +E ++ ML +G +P+++ Y
Sbjct: 575 SCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634
Query: 474 NSYMDGLSNAR 484
NS++ G N +
Sbjct: 635 NSFITGYKNLK 645
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 138/322 (42%), Gaps = 35/322 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y L+ G + FDKA M ++ V + T+N LI+G C + +
Sbjct: 454 PNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEM 513
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +G P +++N++I GF + +M G + VT +DG C
Sbjct: 514 LKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A +++ D +G+ P Y L+ C EGN AL+V+ + K G LP++
Sbjct: 574 TSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISV 633
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGI------------------------------- 396
+ I G + L+ EA EKM+KEGI
Sbjct: 634 YNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMV 693
Query: 397 ----LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+PD +TF L LC G DA +L + + P+ + Y++L++GY R + +
Sbjct: 694 AKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQ 753
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
E L +EML+ +PD TY+
Sbjct: 754 EAFRLHDEMLERKIMPDDTTYD 775
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 1/291 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+++V++ K +D A+ +D M ++PD ++ I+ C+ + + AL + R+M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++ G P +FN+++ + +E +++ E++ G + S V L+ G C + V
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
KA ++ + R G++P D Y L+ EG A E+ ++ G LPS +
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+GL + +A L ++M GI PD+ T+N L+ LC + +A L + G+
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
P +TYH L+ Y E L EM +GF P++ TY + M G N
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN +INGF+K A Y +M + P++VT+ I G+C+ DLAL +
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++R KG P++ ++N+LI GF E + + M++ G + + G N
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKN 643
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A + G+ Y L++ +GN AL++ E+ KGN+P I
Sbjct: 644 LKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L GL R +A L+++M + I P+ + +N L+ G+ +A RL
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763
Query: 428 TKGLDPDGMTYHILV 442
+ + PD TY ILV
Sbjct: 764 ERKIMPDDTTYDILV 778
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F+KA M ++ M K I P++ Y I+G+ K D AL +
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIP--PNIVTYTSFIDGYCKTSCCDLALKMLND 586
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ ++PD+ +N LI GFC+ AL + M + G PN+ +N+ I G+ +
Sbjct: 587 VRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKM 646
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + +MI+ G + + T L+DG +G V A +L + +G +P +
Sbjct: 647 MEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L LC G+ A +++DE+ + P+V+ LI G R K EA L ++ML+
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766
Query: 396 ILPDSVTFNCLL 407
I+PD T++ L+
Sbjct: 767 IMPDDTTYDILV 778
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 1/236 (0%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EMR KG + F+ ++R F E +D+ V + EM E C + + LC
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+A ++ G +P DF + +V+ L G AL + DEL G SV+ T
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
TL+ G R+ +A + E+ L++G++P VT+ L+ + G A L
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL P +++++ G + K+ +L EM D G IPD TYN + L RK
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRK 401
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 168/366 (45%), Gaps = 40/366 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
++ F N+F+K + GL A+ R L+ P + N ++ G + A F+
Sbjct: 207 VYEFVFNSFLKRGEVEKGLNFHRALVERGLV---PKIVDCNKILKGLCMGNQIGVASDFF 263
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D MVR P++VTF+ LI+ +C+ + D A L+ M EKG P++V ++ LI G F
Sbjct: 264 DMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRA 323
Query: 274 RKFDEG-----------------------------------VNMAYEMIELGCEFSSVTC 298
K +EG + + M++ G + VT
Sbjct: 324 GKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTY 383
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL++GLC GRVL+AC + ++G+ P Y L++ C N + + +
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLR 443
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG++P V+ C+ LI GL R EA + +K G+ ++ FN L++ + RT D
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRD 503
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
++ +L + PD +TY +LV G + R E L ++L +GF PD Y + +D
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563
Query: 479 GLSNAR 484
G R
Sbjct: 564 GFCKKR 569
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAF--EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+F+ ++ + R DGL + M K+I P V Y VL+ G + D+AL +
Sbjct: 487 LFNALIDGCFRLKRTRDGLKMYILMGMYKVI---PDVVTYTVLVKGLAEQGRLDEALALF 543
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++++ PD + + LI GFC+ + L +F+ M+ G P++ +N LI FF E
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFRE 603
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + E+I+ G E VT ++ G C+ KA +L P +
Sbjct: 604 GCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITF 663
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C +G A+ + + ++G P+++ + LI+G + A L EKML
Sbjct: 664 TILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLG 723
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ + P+ V+++ L++ LC G +A A + L PD + Y IL+ GY + R E
Sbjct: 724 DRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAE 783
Query: 454 GENLVNEMLDEGFIPD 469
L + ML G +PD
Sbjct: 784 AMMLYDHMLVNGIMPD 799
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 10/335 (2%)
Query: 156 IFHFA----VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
I H+A ++ + ++R++ L +E M K + +Y + N F+K E +K L
Sbjct: 173 ISHYAASEMLDLLIDSDRIDVILENYEEMCK------GLGVYEFVFNSFLKRGEVEKGLN 226
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F+ +V + P +V N ++ G C + +A F M G +PN+V+F+TLI +
Sbjct: 227 FHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYC 286
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + DE ++ MIE G V IL++GL G++ + L RGV
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ G+ G A+EV + K+G P+V+ + LI GL R + +EA G+ ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
LK+G+ P +T++ L++ C D L + KG PD + +L++G +R+
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E + + G + +N+ +DG +++
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 38/360 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
IF ++A+V+ + + + M K +G P+V Y++LING + +A G +
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLK--EGISPNVVTYSILINGLCRNGRVLEACGVFG 404
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++++ ++P V+T++ LI GFC+++ GL+ M KG P+VV + LI G +
Sbjct: 405 QILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQG 464
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + ++ ++ G ++ L+DG R ++ I V+P Y
Sbjct: 465 MMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYT 524
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR---------KGVEAS 385
LV+ L +G AL + +L KKG P I TLI+G + R K ++++
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN 584
Query: 386 G--------------------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G L+ +++K G+ PD VT+N ++ C + A
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+L + P+ +T+ IL+ Y ++ R + + + ML+ G P++ TY+ +DG
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 140/328 (42%), Gaps = 35/328 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV Y+ LI+GF K G Y M+R PDVV ++LI+G R D AL
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F + ++G N FN LI G F ++ +G+ M M VT +LV GL
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG------------------------- 342
+GR+ +A L ++G P Y L++ C
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592
Query: 343 ----------EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
EG LE++ E+ K G P ++ T+I G L+ +A L E +
Sbjct: 593 YNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
P+++TF L++ C GR DA + +G +P+ +TY L+ GY + +
Sbjct: 653 CGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
L +ML + P++ +Y+ +DGL
Sbjct: 713 SAFELYEKMLGDRVSPNIVSYSILIDGL 740
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 136/305 (44%), Gaps = 19/305 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +V+ LA R E ++ F S D I C ++ F K
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALAL--FFQLLKKGFSPDHIIYCT--------LIDGFCKK 568
Query: 168 NRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
GL F+ M+ +G P + IYNVLIN F + + L +++ ++PD+V
Sbjct: 569 RDPATGLQIFKLMQS--NGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N +I G+C K F A+ LF ++ PN ++F LI + + + D+ + + M
Sbjct: 627 TYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSM 686
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG-- 344
+E G E + +T L+DG A EL V P Y L++ LC +G
Sbjct: 687 LERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLM 746
Query: 345 -NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
A +A + + LP VIA LI G ++ + EA L + ML GI+PD +
Sbjct: 747 EEASLAFQCA---IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQ 803
Query: 404 NCLLE 408
L E
Sbjct: 804 KALAE 808
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 29/267 (10%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGF 200
++GIF P++ I++ +N F + + + L E +R++I P + YN +I G+
Sbjct: 582 QSNGIF--PDI-CIYNVLINMFFREGCVENVL---ELLREIIKYGLEPDIVTYNTMICGY 635
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
+ F KA+ ++ + R +P+ +TF ILI +C++ + D A+ +F M E+G PN+
Sbjct: 636 CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNI 695
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
++++ LI G+F + + +M+ + V+ IL+DGLC +G + +A
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQC 755
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
R +LP Y L+ C G A+ + D + G +P
Sbjct: 756 AIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP----------------- 798
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLL 407
L++K L E DS NC+L
Sbjct: 799 ----DDLLQKALAEYGFQDSQAKNCVL 821
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F ++ ++ L+ F ++++ LI P IY +LI G+ + +A+ +
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLI---PDNVIYTILIQGYCRKGMISEAMNLRN 424
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ DVVT+N ++ G C+ K A LF EM E+G P+ + LI G
Sbjct: 425 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLG 484
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +M E + VT L+DG G + A E+ D + +LP +
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS 544
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LV LC +G+ A V DE+ K P+V+ C ++I+G R + +EKM+ E
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G +PD +++N L+ A L ++ GL PD TY+ ++ G+ REN+ K
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E E ++ +M++ G PD +TY S ++G
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGF 692
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 157/342 (45%), Gaps = 37/342 (10%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-------------- 219
AFE M + P V YN +ING K ++++A + M+R
Sbjct: 279 AFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 338
Query: 220 ---------------------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
V PD+V F+ ++S F R+ D AL F ++E G P
Sbjct: 339 EACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 398
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ V + LI+G+ + E +N+ EM++ GC VT ++ GLC + +A +L
Sbjct: 399 DNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 458
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ + RG+ P + L++ C GN A+E+ ++ +K V+ TL++G ++
Sbjct: 459 NEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
A + M+ + ILP ++F+ L+ LC G +A R+ +K + P M
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMIC 578
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ GY R +GE + +M+ EGF+PD +YN+ + G
Sbjct: 579 NSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGF 620
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 180/420 (42%), Gaps = 45/420 (10%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHS-VLNFI---SANPCPCSNDGIFS---CPEMERI 156
+F+H + ++ L S R S+ S VL I + N + + C + +
Sbjct: 98 NFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSV 157
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F + FV+A ++ + AF +R G S+ N LI V+ + A Y
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRS--KGYTVSIDACNALIGSLVRIGWVELAWRIYQE 215
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ R V +V T NI+++ C++ K + E++EKG P++V++NTLI + +
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + + M G T +++GLC G+ +A E+ + R G+ P Y
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335
Query: 336 LVEKLCGEGNA-----------------------------------GIALEVVDELWKKG 360
L+ + C +G+A AL + + + G
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+P + T LI+G R EA L +ML++G D VT+N +L LC +AD
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+L + +GL PD T IL+ G+ + + L +M ++ D+ TYN+ +DG
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 173/422 (40%), Gaps = 52/422 (12%)
Query: 97 AWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI 156
+ ST + + + F ++R+ + + E + + + S D
Sbjct: 143 SLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSID----------- 191
Query: 157 FHFAVNAFVKA-NRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFY 213
A NA + + R+ LA+ +++ V++Y N+++N K + +K F
Sbjct: 192 ---ACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFL 248
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ V PD+VT+N LIS + + A L M KG +P V ++NT+I G
Sbjct: 249 SEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKH 308
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID------------- 320
K++ + EM+ G S T L+ C +G ++ + D
Sbjct: 309 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCF 368
Query: 321 ------FSRRGVLPKDFDYFG----------------LVEKLCGEGNAGIALEVVDELWK 358
F+R G L K YF L++ C +G A+ + +E+ +
Sbjct: 369 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ 428
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G V+ T++ GL + + EA L +M + G+ PDS T L++ C +G +
Sbjct: 429 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQN 488
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L K + D +TY+ L+ G+ + + + +M+ + +P +++ ++
Sbjct: 489 AMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVN 548
Query: 479 GL 480
L
Sbjct: 549 AL 550
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALG--FY 213
F VNA +++ ++ M K I +P+V I N +I G+ CR + + G F
Sbjct: 543 FSILVNALCSKGHLSEAFRVWDEMISKSI--KPTVMICNSMIKGY--CRSGNASDGEIFL 598
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK--GCNPNVVSFNTLIRGFF 271
++M+ + PD +++N LI GF + + A GL ++M EK G P+V ++N+++ GF
Sbjct: 599 EKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFC 658
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E + E + +MIE G T L++G ++ + +A + +RG P D
Sbjct: 659 RENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 111 TFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
+F +V +L S SE V + IS + P + C M + + ++
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPT----VMICNSM-------IKGYCRSGN 590
Query: 170 MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVV 226
+DG + E M + +G P YN LI GFVK KA G +M + + PDV
Sbjct: 591 ASDGEIFLEKM--ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVF 648
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N ++ GFCR + A + R+M E+G NP+ ++ +LI GF + E EM
Sbjct: 649 TYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEM 708
Query: 287 IELG 290
++ G
Sbjct: 709 LQRG 712
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E L KG S+ AC LI L R+ A + +++ + G+ + T N ++
Sbjct: 174 AYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVN 233
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G+ KG+ PD +TY+ L+S Y+ + +E L++ M +GF P
Sbjct: 234 ALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSP 293
Query: 469 DLATYNSYMDGLSNARKSVR 488
+ TYN+ ++GL K R
Sbjct: 294 GVYTYNTVINGLCKHGKYER 313
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R+LR+ EA L+ +G N L+ L +G A R+ S G+ +
Sbjct: 169 RKLREAYEAFTLLRS---KGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNV 225
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
T +I+V+ ++ + ++ ++E+ ++G PD+ TYN+ + S+
Sbjct: 226 YTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 189/416 (45%), Gaps = 19/416 (4%)
Query: 69 ITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSEL 128
++PS + + +K +P + F F WAS R + I+ L F
Sbjct: 57 LSPSIVTYIIK-----NPPNSLLGFRFFIWASKFRRLR-SWVSHNMIIDMLIKDNGFELY 110
Query: 129 HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
VL I S D F + A+ K + + + +FE M+ D +P
Sbjct: 111 WQVLKEIKRCGFSISADA----------FTVLIQAYAKMDMIEKAVESFEMMKDF-DCKP 159
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
V YN +++ V+ ALG Y+RM++ P++ TF+ILI G C++ K AL +F
Sbjct: 160 DVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMF 219
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM ++ PN +++ +I G +K D + M + GC SVT L+ G C
Sbjct: 220 DEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKL 279
Query: 309 GRVLKACELVIDFSR-RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV +A L+ F + R VL K Y L++ L A ++ + P VI
Sbjct: 280 GRVDEALGLLKYFEKDRYVLDKQ-GYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVIL 338
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +++GL + K +A L+ +M + G++PD+ +N L++ CD+G +A L L S
Sbjct: 339 YTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEIS 398
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TY IL+ G R + + + NEM G P + T+N+ +DG A
Sbjct: 399 KNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKA 454
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 28/341 (8%)
Query: 157 FHFAVNAFVKANRMND--GLLA-FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
++ ++ F K R+++ GLL FE R ++D + Y+ LI+G + R F+ A +Y
Sbjct: 269 YNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQG----YSCLIDGLFRARRFEDAQVWY 324
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M +KPDV+ + I++ G + KF AL L EM E+G P+ +N LI+G+
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDL 384
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE ++ E+ + C S+ T IL+ G+C G V A ++ + + G P +
Sbjct: 385 GLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTF 444
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKK---GNLPSVI--------------ACTTLIEGLR 376
L++ C GN +E L+ K G PS+ + T++E L
Sbjct: 445 NALIDGFCKAGN----IEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLC 500
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
++A ++ ++ G P+ +T+N L+ C G A +L KGL PD +
Sbjct: 501 DSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSV 560
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
TY L++G NR ++ +++++L G P Y S+M
Sbjct: 561 TYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFM 601
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 13/311 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN L++GF K D+ALG +DR D ++ LI G R ++F+ A
Sbjct: 264 PDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVW 323
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+R+M E P+V+ + +++G KF + + + EM E G + L+ G C+
Sbjct: 324 YRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCD 383
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A L ++ S+ Y L+ +C G G A ++ +E+ K G PSV+
Sbjct: 384 LGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVT 443
Query: 368 CTTLIEGLRRLRKGVEASGLMEKM-----------LKEGI--LPDSVTFNCLLEDLCDVG 414
LI+G + +A L KM L +G + D+ + ++E LCD G
Sbjct: 444 FNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSG 503
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ A + + + G P+ +TY+IL+ G+ + L E+ +G PD TY
Sbjct: 504 LILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYG 563
Query: 475 SYMDGLSNARK 485
+ ++GL +A +
Sbjct: 564 TLINGLLSANR 574
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 148/350 (42%), Gaps = 33/350 (9%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
++ + KA + D L M R L+ P YN LI G+ D+A +
Sbjct: 338 LYTIMMKGLSKAGKFKDALRLLNEMTERGLV---PDTHCYNALIKGYCDLGLLDEAKSLH 394
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ ++ T+ ILI G CR+ A +F EM + GC P+VV+FN LI GF
Sbjct: 395 LEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKA 454
Query: 274 RKFDEGVNMAYEMIELGCE--------------FSSVTCEILVDGLCNEGRVLKACELVI 319
++ + Y+M E+G + + + +V+ LC+ G +LKA +++
Sbjct: 455 GNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILM 513
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ G P Y L+ C GN A ++ EL KG P + TLI GL
Sbjct: 514 QLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSAN 573
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL--LASTKGLDPDGMT 437
+ +A +++++LK G P + + + C + A L L L S G D +
Sbjct: 574 REEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSE--- 630
Query: 438 YHILVSGYTRENRRK-EGENLVNEMLDEGFIPD---LATYNSYMDGLSNA 483
V EN K E E V +L+ F + LA Y ++ GL A
Sbjct: 631 ----VLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQA 676
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Query: 221 VKPDVVTFNIL-----ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ P +VT+ I + GF +F + FR +R + VS N +I +
Sbjct: 57 LSPSIVTYIIKNPPNSLLGF----RFFIWASKFRRLR------SWVSHNMIIDMLIKDNG 106
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE---LVIDFSRRGVLPKDFD 332
F+ + E+ G S+ +L+ + KA E ++ DF + P F
Sbjct: 107 FELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCK---PDVFT 163
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ + + +AL + + + K LP++ + LI+G+ + K A + ++M
Sbjct: 164 YNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMT 223
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ ILP+ +T+ ++ LC + A RL + G PD +TY+ L+ G+ + R
Sbjct: 224 QRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVD 283
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L+ + ++ D Y+ +DGL AR+
Sbjct: 284 EALGLLKYFEKDRYVLDKQGYSCLIDGLFRARR 316
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 99/264 (37%), Gaps = 37/264 (14%)
Query: 174 LLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
L A+ + +L D P++ YN+LI+GF K + A + + + PD VT+ L
Sbjct: 506 LKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTL 565
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSF----------NTLIRGF----------- 270
I+G + + A + ++ + GC P + N + F
Sbjct: 566 INGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIP 625
Query: 271 -------------FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
F + + +E V EM +F I + GLC GR+ +A ++
Sbjct: 626 GRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKI 685
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
VL L+ +L GN +A E+ KG + C L++ L R
Sbjct: 686 FFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLR 745
Query: 378 LR-KGVEASGLMEKMLKEGILPDS 400
K A L+ +M G DS
Sbjct: 746 SEDKRNRAFDLLSRMKSLGYDLDS 769
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ L + + +V+ E+ + G S A T LI+ ++ +A E M
Sbjct: 97 IIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFD 156
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKE 453
PD T+N +L + V + V L + L+ P+ T+ IL+ G + + +
Sbjct: 157 CKPDVFTYNTVLHVM--VRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQN 214
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +EM +P+ TY + GL A+K+
Sbjct: 215 ALQMFDEMTQRRILPNKITYTIIISGLCQAQKA 247
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 9/309 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YNVL+ +C + + R+ R+ KPDV ++N +I G CR + AL +
Sbjct: 161 PTAATYNVLLKA--QCSDAAADIKDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAAALEM 218
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM K P VV++ TLI E FD+ + + EM G + VT L+DGLC
Sbjct: 219 FSEMVGKCIAPTVVTYTTLIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCK 278
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A EL+ + LP Y +++ LC E A+EV+D + +G P
Sbjct: 279 GGRAASALELMDRMIKEKKLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGL 338
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVDAD 420
LI GL + VEA+ +++M+ GI P+ VT+ N +L LC G A
Sbjct: 339 FGKLIVGLCDAGRAVEAANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAF 398
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ T+ + D T+H+LV ++++ ++ ++V +ML E IP+ T++ + G
Sbjct: 399 QVYQSTRTRSISTDPTTFHLLVESFSKKKNMEKAAHVVLDMLSERCIPERETWDVIISGY 458
Query: 481 SNARKSVRQ 489
+ +K Q
Sbjct: 459 WSKKKGGSQ 467
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L+ M G P + T+N LL+ C D LRL + PD +Y+ ++
Sbjct: 147 ARSLLADMRAAGFAPTAATYNVLLKAQCSDAAADIKDALRLFRNIP--KPDVCSYNTIID 204
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G R R + +EM+ + P + TY + + L+
Sbjct: 205 GLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWLA 242
>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
Length = 442
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 156/312 (50%), Gaps = 9/312 (2%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
G V Y +IN K D+A+ ++RMV + PD+ TF ++I+G C+ K + A
Sbjct: 5 GSQCVVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRAC 64
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+F+EM KG P+++ + +L+ G DE + E++ G + + VT + GL
Sbjct: 65 EVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGL 124
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GRV +A +LV + + FG EG AL + DE+ KKG V
Sbjct: 125 CKNGRVEEAGKLVREMGKMCAAEVLHCIFG---GYVLEGKIEEALALKDEMVKKGVTLDV 181
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
T LI GL +R+ EA + E M+++G +PD+ T+ ++ C G+ A ++ +
Sbjct: 182 RCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEI 241
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL----- 480
GL+ + Y+ L+ G+ NR +E N+ + ML + +P + TYN M GL
Sbjct: 242 MDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQ 301
Query: 481 -SNARKSVRQTR 491
++AR +R+ R
Sbjct: 302 TADARLVLREMR 313
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 5/338 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R F + KA ++N F+ M + +P + +Y L++G K D+A
Sbjct: 45 RTFTVVITGLCKAGKLNRACEVFQEMNRK-GWKPDIIVYTSLVDGLSKASMMDEARKLLQ 103
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+V +KP VT+ ISG C+N + + A L REM K C V + + G+ E
Sbjct: 104 EIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM-GKMCAAEV--LHCIFGGYVLEG 160
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K +E + + EM++ G L+ GL R +A E+ ++G +P Y
Sbjct: 161 KIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYG 220
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V C +G A +VV+ + G + +L++G + + EA + + ML++
Sbjct: 221 MIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRK 280
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
++P VT+N L+ LC +G+T DA LR + G+ P ++Y L+ G + R E
Sbjct: 281 MVMPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADE 340
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++ EM+D G +PD + S + L+ A + T+
Sbjct: 341 AIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQ 378
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 4/292 (1%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H +V ++ + L L E ++K + V Y LI+G R D+A ++
Sbjct: 148 VLHCIFGGYVLEGKIEEALALKDEMVKKGVT--LDVRCYTNLIHGLFYVRRNDEAQEMFE 205
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV+ PD T+ +++S FC+ K A + M G N +N+L+ GF G
Sbjct: 206 AMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHIYNSLMDGFLGVN 265
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDY 333
+ E +N+ M+ S VT IL+ GLC G+ A ++ + R G++P Y
Sbjct: 266 RAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSY 325
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ L G A A++V E+ G +P +CT+LI+ L + EA+ L+ M +
Sbjct: 326 RTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPR 385
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
GI PD++ +N L++ LC + A + + PDG T+ + G+
Sbjct: 386 MGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 437
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R + V+ F K +M E M + IYN L++GF+ +A+ YD
Sbjct: 217 RTYGMIVSHFCKQGKMQAACKVVEIM-DAAGLEANCHIYNSLMDGFLGVNRAREAINVYD 275
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGE 273
M+R V P +VT+NIL+ G C+ + A + REMRE+ G P +VS+ TLI G
Sbjct: 276 TMLRKMVMPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKA 335
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE +++ EM++ G +C L+ L R+ +A +L+ D R G+ P Y
Sbjct: 336 GRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAY 395
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LV+ LCG G A +V+ E+ +P
Sbjct: 396 NALVKVLCGGAKVGPAWDVLVEMMDNSCVP 425
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 147/288 (51%), Gaps = 2/288 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG-L 247
+V Y +L++ + R D F+ R++R ++ D + N + C K+ D AL L
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL-GCEFSSVTCEILVDGLC 306
M E GC P+ S+NT+I+ G + E ++M M + GC V+ +++ GL
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF 283
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG + KAC L + ++GV+P Y +V LC A V+ +++ P +
Sbjct: 284 MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEV 343
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T +I G L + EA+ + ++M +EG++PD VTFN L++ LC R+ +A +
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI 403
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+TKG PD ++Y IL+ GY E R + NL + M D G + D +N
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFN 451
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 163/326 (50%), Gaps = 6/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V+A KA M+ L +R++ D +P Y +I+G+ + +A +
Sbjct: 310 YNSIVHALCKARAMDKAELV---LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFK 366
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ + PD+VTFN L+ C++K+ A +F + KG P+++S++ L+ G+ E
Sbjct: 367 EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEG 426
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+F + N+ + M + G S IL++ G + +A + + +GV P Y
Sbjct: 427 RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC G A+E + ++ G P+ + +LI+G ++A L+ +M+ +
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546
Query: 395 GI-LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
GI P+ F+ ++ LC+ GR ++A + L G PD T++ L+ GY + +
Sbjct: 547 GIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+++ M+ G PD+ TY++ ++G
Sbjct: 607 AFGVLDAMVSAGTEPDVVTYSTLING 632
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 145/295 (49%), Gaps = 1/295 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y++L++G+ F + M + + D FNILI+ + D AL
Sbjct: 409 KPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALL 468
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EMR +G +PNVV++ T+I + + + +MI +G + ++V L+ G C
Sbjct: 469 IFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFC 528
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G ++KA ELV + +G+ + +F ++ LC EG A +V + + G+ P +
Sbjct: 529 THGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDI 588
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+LI+G + K +A G+++ M+ G PD VT++ L+ GR D L
Sbjct: 589 FTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFRE 648
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + P +TY +++ G R R + + +EM++ G ++TY + GL
Sbjct: 649 MLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGL 703
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 150/330 (45%), Gaps = 7/330 (2%)
Query: 159 FAVNAFVKA----NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ N +K+ +R + L M K P V Y ++I+G E KA ++
Sbjct: 237 FSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFN 296
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV+ V P+VVT+N ++ C+ + D A + R+M + P+ V++ +I G+
Sbjct: 297 EMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLG 356
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ E M EM G VT L+D LC R +A E+ + +G P Y
Sbjct: 357 RWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYS 416
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ EG + + G + LI + EA + +M +
Sbjct: 417 ILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ P+ VT+ ++ LC +GR DA ++L + S GL P+ + YH L+ G+ +
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISI-GLKPNTVVYHSLIQGFCTHGDLIK 535
Query: 454 GENLVNEMLDEGF-IPDLATYNSYMDGLSN 482
+ LV+EM+D+G P++ ++S + L N
Sbjct: 536 AKELVSEMMDQGIPRPNITFFSSIIHSLCN 565
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 141/293 (48%), Gaps = 1/293 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +++ K R DKA +M + ++PD VT+ +I G+ ++ A +
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+EM +G P++V+FN+L+ ++ E + + + G + ++ IL+ G
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGR + L + G++ + L+ G AL + E+ +G P+V+
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I L R+ + +A + +M+ G+ P++V ++ L++ C G + A L
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544
Query: 428 TKGL-DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+ P+ + ++ E R +++ N ++ G PD+ T+NS +DG
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDG 597
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 160/346 (46%), Gaps = 21/346 (6%)
Query: 163 AFVKAN-RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGF----------VKCREFDK- 208
AFV A R+ G + E L D R ++ +NGF V C +
Sbjct: 84 AFVAAKARVRAGTFSTEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDAPAL 143
Query: 209 ALGFYDRMVRDRVKPDVV-----TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
A+ ++R+ R+ P VV T+ IL+ CR ++ DL F + G + +
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT 203
Query: 264 NTLIRGFFGERKFDEGVNMA-YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
NT ++ ++ DE ++M + M ELGC + + ++ LC R +A ++++ +
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263
Query: 323 R-RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+ G P Y ++ L EG A + +E+ +KG +P+V+ +++ L + R
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A ++ +M I PD VT+ ++ +GR +A ++ + +GL PD +T++ L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ + R KE + + + +G PD+ +Y+ + G + + V
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFV 429
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 128/268 (47%), Gaps = 6/268 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGF 212
++H + F D + A E + +++D RP+++ ++ +I+ A
Sbjct: 519 VYHSLIQGFCTHG---DLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++ ++ +PD+ TFN LI G+C K D A G+ M G P+VV+++TLI G+F
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D+G+ + EM+ + ++VT +++DGL GR A ++ + G
Sbjct: 636 SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIST 695
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +++ LC A+ + +L + T+I L ++++ EA L +
Sbjct: 696 YTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVS 755
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDAD 420
G++P++ T+ ++ +L G +AD
Sbjct: 756 ASGLVPNASTYGVMIINLLKEGSVEEAD 783
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + +M+ +AM P V Y+ LING+ K D L + M
Sbjct: 591 FNSLIDGYCLVGKMDKAFGVLDAMVS-AGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ RVKP VT+++++ G R + A +F EM E G ++ ++ +++G
Sbjct: 650 LCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCT 709
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + + +++ + +F ++ L R +A +L S G++P Y +
Sbjct: 710 DEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVM 769
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L EG+ A + + K G PS +I L + + V+A M K+ I
Sbjct: 770 IINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTII 829
Query: 397 LPDSVTFNCLLEDLCDVGR 415
++ T + L+ GR
Sbjct: 830 SLEASTTSLLISLFASKGR 848
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 167/320 (52%), Gaps = 5/320 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
+++ +++ K +N+ AF+ +++ P V Y+ LI+GF + A+ +
Sbjct: 227 MYNTIIDSMCKVKLVNE---AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M+ + +KPDV TFNIL++ FC++ K +F M ++G PN V++N+L+ G+
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ ++ ++ M + G + I+++G C + +A L + R+ ++P Y
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L G AL++VD++ +G P++ ++++ L + + +A L+ K
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G PD T++ L++ LC G+ DA ++ KG + D Y I++ G+ E E
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNE 523
Query: 454 GENLVNEMLDEGFIPDLATY 473
L+++M D G IPD TY
Sbjct: 524 ALALLSKMEDNGCIPDAKTY 543
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 158/323 (48%), Gaps = 3/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F ++ D + F M L + +P V +N+L+N F K + + +D M++
Sbjct: 267 ISGFCILGKLKDAIDLFNKMI-LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+ VT+N L+ G+C K+ + A +F M + G NP++ S++ +I GF +KFDE +
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM VT L+DGL GR+ A +LV RGV P Y +++ L
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A+ ++ + KG P + + LI+GL + K +A + E +L +G D
Sbjct: 446 CKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDV 505
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+ +++ C G +A L G PD TY I++ +++ E L+ E
Sbjct: 506 YAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M+ G +P L Y+ Y+ L+
Sbjct: 566 MIARG-LP-LNFYDLYLTRLAQT 586
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 150/300 (50%), Gaps = 3/300 (1%)
Query: 184 IDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+DG +P+V +YN +I+ K + ++A + MV + PDVVT++ LISGFC K
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK 275
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
A+ LF +M + P+V +FN L+ F + K EG + M++ G + + VT
Sbjct: 276 LKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+DG C V KA + ++ GV P Y ++ C A+ + E+ +K
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+P V+ ++LI+GL + + A L+++M G+ P+ T+N +L+ LC + A
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L KG PD TY IL+ G + + ++ + ++L +G+ D+ Y + G
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 153/294 (52%), Gaps = 2/294 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G K E AL R+ + V+P+VV +N +I C+ K + A LF EM
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +P+VV+++ LI GF K + +++ +MI + T ILV+ C +G+ +
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK-M 311
Query: 313 KACELVIDFS-RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
K + V D ++G+ P Y L++ C A + + + + G P + + + +
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G +++K EA L ++M ++ I+PD VT++ L++ L GR A +L +G+
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ TY+ ++ + ++ + L+ + D+GF PD++TY+ + GL + K
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N ++ VK + + L +M +KP++V NILI+ FC+ A +F ++
Sbjct: 88 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P+ ++F TL +G + + + +++ LG F ++ L+ GLC G
Sbjct: 148 KMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETR 207
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ V P Y +++ +C A ++ E+ KG P V+ + LI
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G L K +A L KM+ E I PD TFN L+ C G+ + + + +G+
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ +TY+ L+ GY + +++ N M G PD+ +Y+ ++G +K
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 147/293 (50%), Gaps = 9/293 (3%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+ ++R++R P FN ++ ++K + L L ++M +G PN+V+ N
Sbjct: 65 DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F ++ +++++G ++T L GLC +G++ +A
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVAL 184
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGLRRLRKGV 382
G Y L+ LC G AL+++ + GNL P+V+ T+I+ + +++
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRV--DGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA L +M+ +GI PD VT++ L+ C +G+ DA L + + PD T++ILV
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS-----NARKSVRQT 490
+ + ++ + KEG+ + + M+ +G P+ TYNS MDG N KS+ T
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + L G + +A F+D++V D +++ LI G C+ + AL L
Sbjct: 153 PDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDL 212
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ + PNVV +NT+I + +E ++ EM+ G VT L+ G C
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCI 272
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A +L + P + + LV C +G V D + K+G P+ +
Sbjct: 273 LGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+L++G +++ +A + M + G+ PD +++ ++ C + + +A L
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K + PD +TY L+ G ++ R LV++M D G P++ TYNS +D L +
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 119/253 (47%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
K + ++++ + F N D A+ LF + + P FN ++ + + +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
++ +M G + + V C IL++ C G + A + + G +P + L + LC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
+G A D++ G I+ TLI GL ++ + A L++++ + P+ V
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N +++ +C V +A L +KG+ PD +TY L+SG+ + K+ +L N+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286
Query: 462 LDEGFIPDLATYN 474
+ E PD+ T+N
Sbjct: 287 ILENIKPDVYTFN 299
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 6/348 (1%)
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLI 197
N PCS+ I P + F N ++D + F + + P++ +N ++
Sbjct: 41 NFIPCSSSKINLIP-----YSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIE-FNKIL 94
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
VK + + L +M +KP++V NILI+ FC+ A +F ++ + G N
Sbjct: 95 GSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYN 154
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN ++F TLI+G + + + +N +++ LG +F+ ++ L+DGLC G A +L
Sbjct: 155 PNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDL 214
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + V P Y +++ +C + + A ++ E+ KG P+V+ + LI G
Sbjct: 215 LRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 274
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ K +A L KM+ E I PD TFN L++ C G+ A +L +G P+ +T
Sbjct: 275 VGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVT 334
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y ++ + +R + L+ ++ D+G P++ TY +DGL + K
Sbjct: 335 YSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGK 382
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 2/301 (0%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
AF K++ P+ + LI G + +AL F+D++V + + +++ LI
Sbjct: 140 FAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLI 199
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ + AL L R + K PNVV ++T+I G ++ ++ ++ EM+ G
Sbjct: 200 DGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGIS 259
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L+ G G++ A +L + P + + LV+ C G AL++
Sbjct: 260 PNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKL 319
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
VDE+ +G P+++ +++++ L + + +A L+ K+ +GI P+ T+ L++ LC
Sbjct: 320 VDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCT 379
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+ DA + KG D +TY ++ G+ ++ E L+++M + G IPD T
Sbjct: 380 SGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKT 439
Query: 473 Y 473
Y
Sbjct: 440 Y 440
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 131/270 (48%), Gaps = 5/270 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G K E AL R+ V+P+VV ++ +I G C++K + A L+ EM
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 254
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +PNVV+++ LI GFF K + V++ +MI + T ILVD C G++
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS 314
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +LV + RG P Y +++ LC A+ ++ +L +G P++ T LI
Sbjct: 315 YALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILI 374
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL K +A + E +L +G VT+ + C G +A L G
Sbjct: 375 DGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI 434
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEML 462
PD TY ++ + + K+GEN + E L
Sbjct: 435 PDAKTYELI-----KLSLFKKGENDMAEKL 459
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 8/253 (3%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +R+ +DG+ P+V +Y+ +I+G K + + A Y MV + P+VVT++ LI
Sbjct: 211 ALDLLRR-VDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SGF K A+ LF +M + P+V +FN L+ F K + + EM + G
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT ++D LC RV KA L+ +G+ P Y L++ LC G A +
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDL 410
++L KG +V+ + G +KG+ EAS L+ KM + G +PD+ T+ + L
Sbjct: 390 FEDLLVKGYDITVVTYIVMFYGF--CKKGLFDEASALLSKMEENGCIPDAKTYELIKLSL 447
Query: 411 CDVGRTVDADRLR 423
G A++L
Sbjct: 448 FKKGENDMAEKLH 460
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 183/387 (47%), Gaps = 13/387 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA +RHD + ++ L+ + VL + GI+ PE
Sbjct: 194 FYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRR-------GIYRTPE--- 243
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + ++ +A ++ D L M++ P++ I N I+ FV+ +KAL F +R
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQR-AGVEPNLLICNTTIDVFVRANRLEKALRFLER 302
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VVT+N +I G+C + + A+ L +M KGC P+ VS+ T++ E++
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362
Query: 276 FDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E ++ +M E G VT L+ L +A + D +G Y
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+V LC EG A ++++E+ KG+ P V+ T ++ G RL + +A L++ M
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P++V++ LL +C G++++A + ++ P+ +TY +++ G RE + E
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
++V EM+ +GF P N + L
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSL 569
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 172/426 (40%), Gaps = 57/426 (13%)
Query: 55 RFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLF 114
+ K H L P +Q+T ++L+H L H H + F + FR D +
Sbjct: 372 KMAKEHGLVP--DQVTYNTLIHMLTK--HDHADEALW----FLKDAQEKGFRIDKLGYSA 423
Query: 115 IVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
IV +L R SE ++N +S CP
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCP-------------------------------- 451
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
P V Y ++NGF + E DKA M KP+ V++ L++
Sbjct: 452 --------------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G CR K A + E +PN ++++ ++ G E K E ++ EM+ G
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V +L+ LC +GR +A + + + +G ++ ++ C AL V+
Sbjct: 558 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D+++ V TTL++ L + + EA+ LM+KML +GI P VT+ ++ C +
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 677
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ VD D + +L Y+ ++ + +E + L+ ++L D T
Sbjct: 678 GK-VD-DLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 735
Query: 474 NSYMDG 479
+ M+G
Sbjct: 736 YALMEG 741
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 2/263 (0%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
F+ ++ + R + AL + M+ G PN++ NT I F + ++ + M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+G + VT ++ G C+ RV +A EL+ D +G LP Y+ ++ LC E
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 347 GIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+++ ++ K+ G +P + TLI L + EA ++ ++G D + ++
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 406 LLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
++ LC GR +A D + + S PD +TY +V+G+ R + + L+ M
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 465 GFIPDLATYNSYMDGLSNARKSV 487
G P+ +Y + ++G+ KS+
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSL 506
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 175/372 (47%), Gaps = 41/372 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K + ++ + M+K G+ + Y+ LI+G D A Y M
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEM 291
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PDVV +N +++G+ R + + L L++ M ++GC VVS+N LIRG F K
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKV 350
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDFDYFG 335
DE +++ + E C S+T +LV GLC G + KA ++ + RG L F Y
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAYSS 409
Query: 336 LVEKLCGEGNAGIALEVVDELWK-----------------------------------KG 360
++ LC EG V+D++ K KG
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKG 469
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD-A 419
P+V+ TLI GL + + EA L+++ML++G P+ +T++ L+ LC G+ +D A
Sbjct: 470 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQ-GKKLDMA 528
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L A KG PD ++I++ G + ++ L +EM +P+L T+N+ M+G
Sbjct: 529 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEG 588
Query: 480 LSNARKSVRQTR 491
R R ++
Sbjct: 589 FYKVRDFERASK 600
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 15/338 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
++ ++R L + + E S+ + C C++ + V+ K
Sbjct: 335 VSYNILIRGLFENAKVDEAISIWELLPEKDC-CADSMTYGV---------LVHGLCKNGY 384
Query: 170 MNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+N L E +GR + Y+ +ING + D+ G D+M + KP+
Sbjct: 385 LNKALSILEEAE---NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYV 441
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
N +I+GF R K + AL F M KGC P VV++NTLI G +F E + EM+
Sbjct: 442 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 501
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G + + +T +L++GLC ++ A L +G P + ++ LC G
Sbjct: 502 QKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVE 561
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
AL++ E+ ++ +P+++ TL+EG ++R AS + + +L+ G+ PD +++N L
Sbjct: 562 DALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITL 621
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ LC R DA A +G+ P +T++ILV GY
Sbjct: 622 KGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 158/330 (47%), Gaps = 2/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +N +++A R+ + L ++ M K +G +V YN+LI G + + D+A+ ++
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEK--EGCRTVVSYNILIRGLFENAKVDEAISIWEL 359
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ D +T+ +L+ G C+N + AL + E + + +++++I G E +
Sbjct: 360 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + +M + GC+ + C +++G ++ A + +G P Y
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L A +V E+ +KG P++I + L+ GL + +K A L + L++G
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD N ++ LC G+ DA +L + P+ +T++ L+ G+ + +
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERAS 599
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + +L G PD+ +YN + GL + +
Sbjct: 600 KIWDHILQYGLQPDIISYNITLKGLCSCHR 629
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 9/338 (2%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDG---LLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
IF C R ++ +NA +++N+ ++ L FE M P++ YN+LI +
Sbjct: 82 IFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM----GLSPNLQTYNILIKISCRK 137
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
++FDKA + M PDV ++ LI+ +N AL LF EM E+G P+V +
Sbjct: 138 KQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 197
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDFS 322
N LI GFF + + +++ + ++ + ++++GLC G+ ++ E+
Sbjct: 198 NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK 257
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ + Y L+ LCG GN A V E+ + G P V+ T++ G R +
Sbjct: 258 KNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIE 317
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
E L + M KEG V++N L+ L + + +A + L K D MTY +LV
Sbjct: 318 ECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLV 376
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + + +++ E + D Y+S ++GL
Sbjct: 377 HGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGL 414
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 106 RHDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
R D TF + ++ L R E+ VL+ ++ + C + C + +N
Sbjct: 399 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC---KPNPYVC-------NAVING 448
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
FV+A+++ D L F M P+V YN LING K F +A M++ KP
Sbjct: 449 FVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKP 507
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+++T+++L++G C+ KK D+AL L+ + EKG P+V N +I G K ++ + +
Sbjct: 508 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 567
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
EM + C + VT L++G +A ++ + G+ P Y ++ LC
Sbjct: 568 SEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSC 627
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
A+ +++ +G LP+ I L++G L+ +E
Sbjct: 628 HRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYME 667
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 230 ILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++ + +N D AL +F+ M E GC P + S+N+L+ K+DE +
Sbjct: 58 LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+G + T IL+ C + + KA EL+ +G P F Y L+ L G
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EGILPDSVTFNCLL 407
AL++ DE+ ++G P V LI+G + + AS + E++LK + P+ ++N ++
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237
Query: 408 EDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LC G+ ++ + R+ + +G D TY L+ G + EM + G
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERG--QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295
Query: 466 FIPDLATYNSYMDGLSNA 483
PD+ YN+ ++G A
Sbjct: 296 VSPDVVVYNTMLNGYLRA 313
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + ++ + ++ D L + M++ + P++ +N L+ GF K R+F++A +D
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQR-NCVPNLVTHNTLMEGFYKVRDFERASKIWD 603
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+++ ++PD++++NI + G C + A+G + ++G P +++N L++G+ +
Sbjct: 604 HILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALK 663
Query: 275 KFDEGV 280
+ E V
Sbjct: 664 GYMEPV 669
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 179/405 (44%), Gaps = 75/405 (18%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P H +N+F NR+ AF + K++ +P + + LI G +
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRVG---FAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+M+ + +PDVVT+ LI+G C+ A+ L M +K C PNV ++NT
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ EM+ G CE+ V
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG+V +A ++V +RGV P Y L++ C A+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + KG +P+VI+ TLI G ++++ +A L +M ++ ++PD+VT++ L+ L
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Query: 411 CDVGRTVD---------------------------------ADRLRLLASTKG--LDPDG 435
C V R D A+ + LL + +G LDPD
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDI 446
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+I + G R + +L + + +G PD+ TY+ ++GL
Sbjct: 447 QVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 154/318 (48%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++ + +F M ++ PS +N L+ K + L +M + P++ T
Sbjct: 40 NTIDGAISSFNRMLRM-QPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT 98
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ILI+ FC + A + ++ + G P+ +F TLIRG + E K E +++ +MI
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G VT L++GLC G A L+ ++ P F Y +++ LC +
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ KG P + +LI L L + + L+ +M+ I+PD V+FN ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ +A + +G++P+ +TY L+ G+ + E + + M+ +G +
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 468 PDLATYNSYMDGLSNARK 485
P++ +YN+ ++G ++
Sbjct: 339 PNVISYNTLINGYCKIQR 356
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 138/304 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI+ E+ + MV ++ PDVV+FN ++ C+ K A +
Sbjct: 234 PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M ++G PNVV++ L+ G + DE V + M+ GC + ++ L++G C
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ KA L + R+ ++P Y L+ LC A+ + E+ +P+++
Sbjct: 354 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + R EA L++ + + PD N ++ +C G A L S
Sbjct: 414 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 473
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+KGL PD TY I+++G R E L EM + G + YN+ G ++
Sbjct: 474 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 533
Query: 488 RQTR 491
R +
Sbjct: 534 RAIQ 537
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 7/315 (2%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+ +++D + P V +N +++ K + +A D+M++ V+P+VVT+ L+ G C
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A+ +F M KGC PNV+S+NTLI G+ ++ D+ + + EM +VT
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 378
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC+ R+ A L + +P Y L++ LC A+ ++ +
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + I+G+ R + A L + +G+ PD T++ ++ LC G
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L G +G Y+ + G+ R N L+ EM+ GF D +T ++
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 558
Query: 478 -----DGLSNARKSV 487
DGL + K +
Sbjct: 559 KMLSDDGLDQSLKQI 573
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 179 AMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
A+ K I+G P + + N+ I+G + E + A + + ++PDV T++I+I+G
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
CR D A LFREM E GC N +NT+ RGF + + + EM+ G +
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 551
Query: 296 VTCEILVDGLCNEG 309
T + V L ++G
Sbjct: 552 STMTLFVKMLSDDG 565
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ R+ D + F M P++ Y +L++ K R +A+ +
Sbjct: 383 IHGLCHVERLQDAIALFHEMVA-CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD+ NI I G CR + + A LF + KG P+V +++ +I G DE
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+ EM E GC + + G +A +L+ + RG
Sbjct: 502 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 164/334 (49%), Gaps = 12/334 (3%)
Query: 158 HFAVN----AFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALG 211
HF N A KA R + + AF ++K+ + R P++ Y L++GF+K D+AL
Sbjct: 254 HFTFNPLVAALCKAERTEEAI-AF--VKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
V PD VT+ +I G C+ + + F EMR +G P+ V++ LI GF
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + +M++ G S+VT I++DGLC GRV +A + RG +
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C EGN A+E+ + +G P++++ +I GL R K +A EK+
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 490
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS--TKGLDPDGMTYHILVSGYTREN 449
L+ + PD TFN L LC TV D + L S ++G P+ +Y IL+ G R
Sbjct: 491 LQRRLCPDVYTFNSFLHGLCQRLDTV-GDGVELFESMVSQGTSPNLHSYSILMDGICRAG 549
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ + +EM+ G PD+ +N+ + L A
Sbjct: 550 GLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIA 583
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R+ +N K +++ +L + M P + + V+ING + + D+A +
Sbjct: 10 RVCTALLNGLCKTGQLDRAMLLLDEM----PCSPDMVAFTVVINGLCREKRLDEAFSVLE 65
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
R VR +PD VT+N+ I G C+ ++ D A L ++M EK C P V++ L+ G
Sbjct: 66 RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 125
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE + + +M+E G + T +++DGL GRV +A + +D G P F Y
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185
Query: 335 GLVEKLCGEGNAGIAL----EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
L+ L G AL ++V+ +G P V+ +I L ASG +E
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC-------ASGNLED 238
Query: 391 MLKE-GILPDSV-----TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L L DS+ TFN L+ LC RT +A S + P TY LV G
Sbjct: 239 ALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDG 298
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + R E + E ++ GFIPD TY S +DGL
Sbjct: 299 FLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGL 334
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 8/336 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFY 213
+ + ++ KA R+ + F M L +G RP +Y LI+G K + D+AL +
Sbjct: 147 KTYTVVIDGLSKAGRVEEARRIFVDM--LGNGCRPDAFVYTALISGLAKIGKLDEALVYL 204
Query: 214 DRMVRDR----VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
++MV + V+PDVV N++I C + + AL F E+ + + +FN L+
Sbjct: 205 NQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAA 263
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ +E + +M E C + T LVDG GR+ +A + + RG +P
Sbjct: 264 LCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPD 323
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y +++ LC G E E+ +G P + LI+G + + +A +
Sbjct: 324 AVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYR 383
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ML+ G + +VT+N +L+ LC GR +A L +G +TY L+ G+ E
Sbjct: 384 QMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEG 443
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L MLD G P+L +YN + GL A K
Sbjct: 444 NVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 7/311 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R+ +G F MR P Y LI+GF+K + KA Y +M++
Sbjct: 331 IDGLCKLGRVEEGCERFHEMRNR-GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 389
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
VT+NI++ G C+ + A F M E+GC VV+++ L+ GF E V
Sbjct: 390 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 449
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M++ GCE + V+ I++ GLC G++ KA +R + P + + + L
Sbjct: 450 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGL 509
Query: 341 CGE-GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILP 398
C G +E+ + + +G P++ + + L++G+ R G+E + + +M+ G+ P
Sbjct: 510 CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICR-AGGLEVTLEIFHEMVSRGVAP 568
Query: 399 DSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
D V FN L+ LC GR +A + R L PD +Y L+ +R R +E L
Sbjct: 569 DVVVFNTLIRWLCIAGRVDEALEVFRELERRSA--PDAWSYWSLLDALSRCERMEEARLL 626
Query: 458 VNEMLDEGFIP 468
M +G P
Sbjct: 627 SFHMKLQGCAP 637
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 7/245 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ KA R+ + F AM + +V Y+ L++GF A+ + RM
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEER-GCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +P++V++NI+I G CR K A F ++ ++ P+V +FN+ + G ++
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC--QRL 513
Query: 277 D---EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D +GV + M+ G + + IL+DG+C G + E+ + RGV P +
Sbjct: 514 DTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVF 573
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC G ALEV EL ++ + P + +L++ L R + EA L M
Sbjct: 574 NTLIRWLCIAGRVDEALEVFRELERR-SAPDAWSYWSLLDALSRCERMEEARLLSFHMKL 632
Query: 394 EGILP 398
+G P
Sbjct: 633 QGCAP 637
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A+ ++DE+ P ++A T +I GL R ++ EA ++E+ ++
Sbjct: 14 ALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVRA 70
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD VT+N ++ LC R DA +L K P +TY LV G + R E
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ +M+++G P L TY +DGLS A
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKA 159
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
C L++GLC G++ +A L+ + P + ++ LC E A V++
Sbjct: 11 VCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ G P + I+GL + + +A L++KM ++ LP +VT+ L++ L GR
Sbjct: 68 VRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRL 127
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A + KG P TY +++ G ++ R +E + +ML G PD Y +
Sbjct: 128 DEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTAL 187
Query: 477 MDGLSNARK 485
+ GL+ K
Sbjct: 188 ISGLAKIGK 196
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 39/195 (20%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN---- 229
A E R+++D P++ YN++I G + + KA +++++++ R+ PDV TFN
Sbjct: 448 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLH 507
Query: 230 --------------------------------ILISGFCRNKKFDLALGLFREMREKGCN 257
IL+ G CR ++ L +F EM +G
Sbjct: 508 GLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVA 567
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P+VV FNTLIR + DE + + E+ E + + L+D L R+ +A L
Sbjct: 568 PDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDALSRCERMEEARLL 626
Query: 318 VIDFSRRGVLPKDFD 332
+G P+ +D
Sbjct: 627 SFHMKLQGCAPRHYD 641
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 163/337 (48%), Gaps = 11/337 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R++ FE M G V Y +IN K D+A+ ++RMV +
Sbjct: 80 IMGLADSGRIDVACELFEEMSS--SGSQCVVAYTAIINALFKAHRPDQAIACFERMVARK 137
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD+ TF ++I+G C+ K + A +F+EM KG P+++ + +L+ G DE
Sbjct: 138 CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEAR 197
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ E++ G + + VT + GLC GRV +A +LV + + FG
Sbjct: 198 KLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFG---GY 254
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG AL + DE+ KKG V T LI GL +R+ EA + E M+++G +PD+
Sbjct: 255 VLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDT 314
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+ ++ C G+ A ++ + GL+ + Y+ L+ G+ NR +E N+ +
Sbjct: 315 RTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYST 374
Query: 461 MLDEGFIPDLATYNSYMDGL------SNARKSVRQTR 491
ML + P + TYN M GL ++AR +R+ R
Sbjct: 375 MLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMR 411
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 181/420 (43%), Gaps = 15/420 (3%)
Query: 83 HHHPQFTHYDFHIFAWASTI----DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISAN 138
+ H D + ++ + I DS R D LF S + S +++N +
Sbjct: 61 YFHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKA 120
Query: 139 PCPCSNDGIFS------CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
P F C R F + KA ++N F+ M + +P + +
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRK-GWKPDIIV 179
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++G K D+A +V +KP VT+ ISG C+N + + A L REM
Sbjct: 180 YTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM- 238
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
K C V + + G+ E K +E + + EM++ G L+ GL R
Sbjct: 239 GKMCAAEV--LHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRND 296
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A E+ R+G +P Y +V C +G A +VV+ + G + +L+
Sbjct: 297 EAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLM 356
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGL 431
+G + + EA + ML++ + P VT+N L+ LC +G+T DA LR + G+
Sbjct: 357 DGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGI 416
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
P ++Y L+ G + R E ++ EM+D G +PD + S + L+ A + T+
Sbjct: 417 VPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQ 476
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 4/292 (1%)
Query: 156 IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ H +V ++ + L L E ++K + V Y LI+G R D+A ++
Sbjct: 246 VLHCIFGGYVLEGKIEEALTLKDEMVKKGVT--LDVRCYTNLIHGLFYVRRNDEAQEMFE 303
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MVR PD T+ +++S FC+ K A + M G N +N+L+ GF G
Sbjct: 304 AMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVN 363
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDY 333
+ E +N+ M+ + S VT IL+ GLC G+ A ++ + R G++P Y
Sbjct: 364 RAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSY 423
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ L G A A++V E+ G +P +CT+LI+ L + EA+ L+ M +
Sbjct: 424 RTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPR 483
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
GI PD++ +N L++ LC + A + + PDG T+ + G+
Sbjct: 484 MGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R + V+ F K +M E M + +YN L++GF+ +A+ Y
Sbjct: 315 RTYGMIVSHFCKQGKMQAACKVVEIM-DAAGLEANCHVYNSLMDGFLGVNRAREAINVYS 373
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGE 273
M+R VKP +VT+NIL+ G C+ + A + REMRE+ G P +VS+ TLI G
Sbjct: 374 TMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKA 433
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE +++ EM++ G +C L+ L R+ +A +L+ D R G+ P Y
Sbjct: 434 GRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAY 493
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LV+ LCG G A +V+ E+ +P
Sbjct: 494 NALVKVLCGGAKVGPAWDVLVEMMDNSCVP 523
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 41/330 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + A R + + M L + V+ + +++ + +E D+AL ++
Sbjct: 7 YNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVT-HGIILKALCERKEVDQALSYFHS- 64
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V R DVV++ LI G + + D+A LF EM G + VV++ +I F +
Sbjct: 65 VSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAHRP 123
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + M+ C+ T +++ GLC G++ +ACE+ + +R+G
Sbjct: 124 DQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKG----------- 172
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
WK P +I T+L++GL + EA L+++++ G+
Sbjct: 173 --------------------WK----PDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGM 208
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P VT+ + LC GR +A + L G H + GY E + +E
Sbjct: 209 KPTEVTYTSFISGLCKNGRVEEAGK---LVREMGKMCAAEVLHCIFGGYVLEGKIEEALT 265
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L +EM+ +G D+ Y + + GL R++
Sbjct: 266 LKDEMVKKGVTLDVRCYTNLIHGLFYVRRN 295
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 1/288 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ + + + G+V + ++AL D MV+ V DV + LI G ++ D A +F
Sbjct: 243 AAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMF 302
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M +GC P+ ++ ++ F + K + M G E + L+DG
Sbjct: 303 EAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGV 362
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIA 367
R +A + R+ V P Y L+ LC G A V+ E+ ++ G +P++++
Sbjct: 363 NRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVS 422
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI GL + + EA + +M+ G++PD + L++ L R +A +L
Sbjct: 423 YRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMP 482
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G+ PD + Y+ LV + +++ EM+D +PD +T+ +
Sbjct: 483 RMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRA 530
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 162/330 (49%), Gaps = 4/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K + ++ + M+K G+ + Y+ LI+G D A Y M
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEM 316
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PDVV +N +++G+ R + + L L++ M ++GC VVS+N LIRG F K
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKV 375
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDFDYFG 335
DE +++ + E C S+T +LV GLC G + KA ++ + RG L F Y
Sbjct: 376 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAYSS 434
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC EG V+D++ K G P+ C +I G R K +A M+ +G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P VT+N L+ L R +A L KG P+ +TY +L++G + +
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
NL + L++GF PD+ +N + GL ++ K
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGK 584
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 183/448 (40%), Gaps = 52/448 (11%)
Query: 69 ITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSEL 128
++P ++ LKS+ + H + IF + + H F I++ L + +
Sbjct: 8 LSPKRVIKLLKSEKNPHSALS-----IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHV 62
Query: 129 HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
++ I C C D + + A+ K + + L F+ M ++ +P
Sbjct: 63 SRIVELIRTQKCKCPEDVALT----------VIKAYAKNSMPDQALDIFQRMHEIFGCQP 112
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ YN L+N ++ ++D+A F+ + P++ T+NILI CR K+FD A L
Sbjct: 113 GIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELL 172
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M E+G +P+V S+ TLI + + + EM E G IL+DG +
Sbjct: 173 NWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232
Query: 309 GRVLKACE--------------------LVIDFSRRGVLPKDFD---------------- 332
G +L A E ++ + G + F+
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ LCG GN A V E+ + G P V+ T++ G R + E L + M
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
KEG V++N L+ L + + +A + L K D MTY +LV G +
Sbjct: 353 KEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +++ E + D Y+S ++GL
Sbjct: 412 KALSILEEAENGRGDLDTFAYSSMINGL 439
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 157/337 (46%), Gaps = 39/337 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +N +++A R+ + L ++ M K +G +V YN+LI G + + D+A+ ++
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEK--EGCRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ D +T+ +L+ G C+N + AL + E + + +++++I G E +
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + +M + GC+ + C +++G F R L +FG
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVING----------------FVRASKLEDALRFFG 488
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ KG P+V+ TLI GL + + EA L+++ML +G
Sbjct: 489 -------------------NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 396 ILPDSVTFNCLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
P+ +T++ L+ LC G+ +D A L A KG PD ++I++ G + ++
Sbjct: 530 WKPNMITYSLLMNGLCQ-GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L +EM +P+L T+N+ M+G R R ++
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 15/286 (5%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
++ ++R L + + E S+ + C C++ + V+ K
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDC-CADSMTYG---------VLVHGLCKNGY 409
Query: 170 MNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+N L E +GR + Y+ +ING + D+ G D+M + KP+
Sbjct: 410 LNKALSILEEAE---NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHV 466
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
N +I+GF R K + AL F M KGC P VV++NTLI G +F E + EM+
Sbjct: 467 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 526
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + +T +L++GLC ++ A L +G P + ++ LC G
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVE 586
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
AL++ E+ ++ +P+++ TL+EG ++R AS + + +L+
Sbjct: 587 DALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 51/230 (22%)
Query: 106 RHDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
R D TF + ++ L R E+ VL+ ++ + C + + +N
Sbjct: 424 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH----------GCKPNPHVCNAVING 473
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
FV+A+++ D L F M P+V YN LING K F +A M+ KP
Sbjct: 474 FVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532
Query: 224 DVVTFNILISGFCRNKKFDLALGL-----------------------------------F 248
+++T+++L++G C+ KK D+AL L +
Sbjct: 533 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 592
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
EM+++ C PN+V+ NTL+ GF+ R F+ + +++ +SS C
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ---SWSSSNC 639
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P ++N LL L + + +A+ L T GL P+ TY+IL+ R+ + +
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L+N M ++GF PD+ +Y + ++ L+
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLA 195
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 145/288 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K E AL ++ V DVV +NI+I+ C++K A L+ EM
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
K +P+VV+FN+LI GF + E + +EM+ T ILVD LC +G +
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ ++GV+P Y L++ C A V + + G P + +I
Sbjct: 287 RAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL +++ EA L ++M +GI PD+VT+N L++ LC +GR A +L G+
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIP 406
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ L+ + + + LV ++ D+G P + TYN +DGL
Sbjct: 407 ADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGL 454
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 186/405 (45%), Gaps = 27/405 (6%)
Query: 78 LKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISA 137
LK LH H FH+ D ++ ++ L + E + L +
Sbjct: 145 LKEALHFHDHVIALGFHL------------DQVSYRTLINGLC---KIGETRAALQMLKK 189
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNV 195
N + +++ +N+ K ++D A++ ++I R P V +N
Sbjct: 190 IEGKLVNTDVV-------MYNIIINSLCKDKAVSD---AYQLYSEMITKRISPDVVTFNS 239
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI GF + +A G + MV + PDV TF+IL+ C++ A + M ++G
Sbjct: 240 LILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQG 299
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+VV++++L+ G+ + ++ ++ M LG + + I+++GL V +A
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L + +G+ P Y L++ LC G A ++VDE+ G ++ +LI+ L
Sbjct: 360 SLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ +A L++K+ +GI P T+N L++ LC GR +A + KG +
Sbjct: 420 CKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNA 479
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+I+++G +E E E L+++M + G IPD TY + + L
Sbjct: 480 WTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ VN + M F + KL P+ +N LING + +AL F+D +
Sbjct: 97 FNILVNCYCHLGEMTFAFSIFAKILKL-GYHPTTITFNTLINGICLNGKLKEALHFHDHV 155
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ D V++ LI+G C+ + AL + +++ K N +VV +N +I ++
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAV 215
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EMI VT L+ G C G++ +A L + + + P + + L
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC +GN A ++ + K+G +P V+ ++L++G + + +A + M + G+
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P + ++N ++ L + +A L KG+ PD +TY+ L+ G + R
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
LV+EM + G D+ TYNS +D L
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVL 419
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 152/319 (47%), Gaps = 7/319 (2%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCR--EFDKALGFYDRMVRDRVKPDV 225
+N+ + +F M ++ RP+ SI +N ++ VK + A+ ++ + P +
Sbjct: 38 VNNDVSSFHRMLRM---RPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTI 94
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTFNIL++ +C + A +F ++ + G +P ++FNTLI G K E ++
Sbjct: 95 VTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDH 154
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
+I LG V+ L++GLC G A +++ + V Y ++ LC +
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A ++ E+ K P V+ +LI G + + EA GL +M+ + I PD TF+
Sbjct: 215 VSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSI 274
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ LC G A + + +G+ PD +TY L+ GY N + +++ + M G
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334
Query: 466 FIPDLATYNSYMDGLSNAR 484
P +YN ++GL +
Sbjct: 335 VAPHAHSYNIMINGLGKIK 353
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 11/372 (2%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ + ++ ++ L + R +E + ++ + C CP + R + + A
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNC---------CPTV-RTYTVLIYALS 310
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ R + L F M++ P+V Y VLI+G K + D+A M + P V
Sbjct: 311 GSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N LI G+C+ D A + M C PN ++N LI G +RK + + + +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+E S +T L+ G C + A L+ + G++P + Y ++ LC EG
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A + D + KG + + T LI+G ++ K A L+E+ML + LP+S T+N
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L+E LC + +A L T G+ P +TY IL+ ++ + N M+ G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 466 FIPDLATYNSYM 477
+ PD+ TY +++
Sbjct: 610 YQPDVCTYTAFL 621
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 144/293 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G + ++AL + M D P V T+ +LI + + AL LF EM+
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
EKGC PNV ++ LI G E K DE M EM E G S VT L+DG C EG +
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A E++ P Y L+ LC + A+ +++++ ++ PS+I +LI
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G ++ A L+ M + G++PD T++ ++ LC GR +A L KG+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + Y L+ GY + + +L+ ML++ +P+ TYN ++GL +K
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N ++NG+ K +A + ++V+ + PD T+ LI G CRNK D A +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251
Query: 248 FREMREKGCNPNVVSFNTLIRGF------------FGERKFD------------------ 277
F M +KGC N VS+ LI G F + D
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311
Query: 278 -----EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E +N+ EM E GCE + T +L+DGLC E ++ +A +++ + S +G++P
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ C EG A E++D + P+ LI GL + RK +A L+ KML
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ + P +T+N L+ C V A RL L + GL PD TY + + +E R +
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L + + +G + Y + +DG K
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 170 MNDGLLAFEAMRKL-IDG----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ D L E RK+ DG +P++ YN ++ K D+ Y ++ +++ P+
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ TFN +++G+C+ A ++ + G +P+ ++ +LI G + D +
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M + GC+ + V+ L+ GLC GR+ +A +L D + P Y L+ L G G
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + +E+ +KG P+V T LI+GL + K EA ++ +M ++G++P VT+N
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G DA + L + P+ TY+ L+ G ++ + + L+N+ML+
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 465 GFIPDLATYNSYMDG 479
P L TYNS + G
Sbjct: 434 KLSPSLITYNSLIHG 448
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 182/418 (43%), Gaps = 51/418 (12%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ +L+ S R E ++ N + C P + + ++ K N+M
Sbjct: 301 TYTVLIYALSGSGRKVEALNLFNEMKEKGCE---------PNV-HTYTVLIDGLCKENKM 350
Query: 171 NDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
++ +L+ + + LI PSV YN LI+G+ K D A D M + P+ T+
Sbjct: 351 DEARKMLSEMSEKGLI---PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N LI G C+ +K A+ L +M E+ +P+++++N+LI G + + M E
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G T + +D LC EGRV +A L +GV + Y L++ C G +
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL- 407
A +++ + LP+ LIEGL + +K EAS L+ KML G+ P VT+ L+
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587
Query: 408 ------------------------EDLCDV----------GRTVDADRLRLLASTKGLDP 433
D+C G + D + + +G+ P
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
D +TY +L+ GY R + + M+D G P L + + LS+ + +++TR
Sbjct: 648 DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR-MKETR 704
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 168/404 (41%), Gaps = 44/404 (10%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ + +L R E ++ + + A + E I+ ++ + K
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN----------EVIYTALIDGYCKV 522
Query: 168 NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+++ +A+ + ++++ P+ YNVLI G K ++ +A +M+ VKP V
Sbjct: 523 GKID---VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+ ILI ++ FD AL +F M G P+V ++ + +F + +E ++ +
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M E G VT +L+DG G +A + + G P + L++ L E
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699
Query: 346 AG-----------------------------IALEVVDELWKKGNLPSVIACTTLIEGLR 376
IAL++ +++ + G V LI G
Sbjct: 700 MKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFC 759
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + EA GL+ M + G+ P +N LL+ C +G +A RL GL P
Sbjct: 760 QQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 819
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y +LV G E ++ + + + +L G+ D + +DGL
Sbjct: 820 SYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 29/320 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y+V I+ K ++A +D + VK + V + LI G+C+ K D+A L
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M C PN ++N LI G E+K E ++ +M+ +G + + VT IL+ +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ G P Y + +G +V+ ++ ++G LP ++
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE------------------- 408
T LI+G RL A ++ M+ G P + L++
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711
Query: 409 -------DLCDVGRTVDAD-RLRLLAST--KGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D+ DV +T++ + L+L G D Y L++G+ ++ R +E + LV
Sbjct: 712 VSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 771
Query: 459 NEMLDEGFIPDLATYNSYMD 478
+ M + G P YNS +D
Sbjct: 772 HHMKERGMSPSEDIYNSLLD 791
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 90/233 (38%), Gaps = 29/233 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK------- 240
P + Y VLI+G+ + +A F MV KP + +ILI +
Sbjct: 647 PDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSE 706
Query: 241 ----------------------FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+++AL LF +M E GC +V + LI GF + + +E
Sbjct: 707 IGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 766
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + M E G S L+D C G +A LV G+LP Y LV
Sbjct: 767 AQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVC 826
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
L EG+ A V L G +A LI+GL + E S L++ M
Sbjct: 827 GLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 11/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YNVL+ C + + R+ R+ KPDV ++N +I G CR + AL +
Sbjct: 162 PTAATYNVLLKAH--CSDAAAHIEDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDM 219
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM K P VV++ T+I E FD+ + + +EM G + VT L+DGLC
Sbjct: 220 FSEMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCK 279
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A EL+ + LP Y +++ LC E A+E++D + +G P
Sbjct: 280 GGRATSALELLDRMIKEKKLPNMITYSSVIDGLCKEHMLSEAMEILDRMRLQGRKPDAGL 339
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVDAD 420
LI GL + VEA+ +++M+ GI P+ VT+ N +L LCD G A
Sbjct: 340 FGKLIVGLCDAGRAVEAANYLDEMVLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAF 399
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ T+ + D T+H+LV +++ N K +V +ML E IP+ T++ + G
Sbjct: 400 QVYQSTRTRSISTDPTTFHLLVESFSKNNIEKAAR-VVLDMLSERCIPERETWDVIISGY 458
Query: 481 SNARKSVRQ 489
+ +K VRQ
Sbjct: 459 WS-KKKVRQ 466
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L+ M G P + T+N LL+ C D LRL + PD +Y+ ++
Sbjct: 148 ARSLLADMRAAGFAPTAATYNVLLKAHCSDAAAHIEDALRLFRNIP--KPDVCSYNTIID 205
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G R R E ++ +EM+ + P + TY + + L+
Sbjct: 206 GLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLA 243
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K + + F M+++ P V +N LI+G+ KC E D+ + M
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEM-GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R K DVVT+N LI+ FC+ + + A G F M+ +G NVV+F+T + F E
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + +M G + T L+DG C GR+ A L+ + R+GV Y L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC E A +V+ + K G + + TTLI G + +A GL+ +M +G+
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D + L++ LC+V + +A L GL+P+ + Y ++ + + E
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ ++LD GF P++ TY + +DGL A
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKA 516
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ E MR+ + V YN LIN F K + A G++ M
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRR-SGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ V +VVTF+ + FC+ A+ LF +MR +G N ++ LI G +
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + + EM+ G + VT +LVDGLC E +V +A +++ + GV + Y L
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N+ AL ++ E+ KG + LI+GL + K EA L+ KM + G+
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ + + +++ G+ +A + G P+ +TY L+ G + E +
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
N+M D G P++ Y + +DGL
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGL 548
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 147/327 (44%), Gaps = 3/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F V+AF K + + + F MR + G + Y LI+G K D A+ D
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMR--VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR V +VVT+ +L+ G C+ +K A + R M + G N + + TLI G F +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + EM G E L+ GLCN ++ +A L+ G+ P Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ G A+ ++ ++ G P+VI LI+GL + EA KM G
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG 533
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ + L++ LC G +A +L KG+ D + Y L+ GY ++ +
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF 593
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L +M+D G DL Y ++ G N
Sbjct: 594 ALKAKMIDSGLQLDLFCYTCFISGFCN 620
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ KA R++D ++ + M + G P +V Y VL++G K R+ +A M +
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVR--QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA 392
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V+ + + + LI G NK + ALGL EM+ KG ++ + LI+G K DE
Sbjct: 393 GVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ +M E G E + + ++D G+V +A ++ G P Y L++
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+ A+ +++ G P+V A T L++GL + EA L +M+ +G+ D
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLD 572
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V + LL+ G DA L+ GL D Y +SG+ N E + +
Sbjct: 573 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 632
Query: 460 EMLDEGFIPDLATYN 474
EM+ G PD A YN
Sbjct: 633 EMIGHGIAPDRAVYN 647
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 138/279 (49%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D++ R+ P+V TFNI+I C+ + A LF M+E GC P+VV+FN+L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ + DE + EM GC+ VT L++ C GR+ A R GV
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+ + V+ C EG A+++ ++ +G + T LI+G + + +A
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+++M+++G+ + VT+ L++ LC + +A+ + + G+ + + Y L+ G+
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ L++EM ++G D++ Y + + GL N K
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 2/295 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +Y LI+G + +KALG M ++ D+ + LI G C K D A
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E G PN + + T++ F K E + M ++++ G + + +T L+DGLC
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A G+ P Y LV+ LC G A+++ +E+ KG +
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T L++G + +A L KM+ G+ D + C + C++ +A +
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G+ PD Y+ L+S Y + +E +L +EM E +P ++ D S
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPSCTDSDTATDAGS 687
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F VN F R+++ + + M ++ RP + + LING +AL DRM
Sbjct: 172 FSTLVNGFCLEGRVSEAVALVDRMVEM-KQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD VT+ +++ C++ LAL LFR+M E+ +VV ++ +I + F
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ +++ EM G + VT L+ GLCN+G+ +++ + R ++P + L
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ +E+ +G P I +LI+G + EA+ + + M+ +G
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT++ L+ C R D RL S+KGL P+ +TY+ LV G+ + + +
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ G P + TY +DGL +
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCD 496
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + FE+M I RP + +N L + + +++D LGF M + ++ D+
Sbjct: 79 KVNDAIDLFESM---IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 135
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T I+I+ +CR KK A + + G P+ ++F+TL+ GF E + E V + M
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+ VT L++GLC +GRV +A L+ G P + Y ++ +LC GN+
Sbjct: 196 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+AL++ ++ ++ SV+ + +I+ L + +A L +M +GI D VT++ L
Sbjct: 256 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 315
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ G+ D ++ + + PD +T+ L+ + +E + E + L NEM+ G
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375
Query: 467 IPDLATYNSYMDG 479
PD TYNS +DG
Sbjct: 376 APDTITYNSLIDG 388
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 4/310 (1%)
Query: 178 EAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
+ +R++I GR P V ++ LI+ FVK + +A Y+ M+ + PD +T+N LI G
Sbjct: 330 KMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 388
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
FC+ A +F M KGC P++V+++ LI + ++ D+G+ + E+ G +
Sbjct: 389 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 448
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
++T LV G C G++ A EL + RGV P Y L++ LC G ALE+ +
Sbjct: 449 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 508
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ K + +I G+ K +A L + +G+ PD VT+N ++ LC G
Sbjct: 509 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 568
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+AD L G PD TY+IL+ + + L+ EM GF D +T
Sbjct: 569 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 628
Query: 475 SYMDGLSNAR 484
+D LS+ R
Sbjct: 629 MVIDMLSDRR 638
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N R+++ L+ + M + +P Y ++N K AL + +M
Sbjct: 211 INGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 269
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K VV ++I+I C++ FD AL LF EM KG +VV++++LI G + K+D+G
Sbjct: 270 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M EMI VT L+D EG++L+A EL + RG+ P Y L++
Sbjct: 330 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C E A ++ D + KG P ++ + LI + ++ + L ++ +G++P++
Sbjct: 390 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+N L+ C G+ A L ++G+ P +TY IL+ G + + +
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + YN + G+ NA K
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASK 534
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 148/291 (50%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
++IN + + ++ A R + +PD +TF+ L++GFC + A+ L M E
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P++V+ +TLI G + + E + + M+E G + VT +++ LC G A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+L R + Y +++ LC +G+ AL + +E+ KG V+ ++LI G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L K + + ++ +M+ I+PD VTF+ L++ G+ ++A L T+G+ PD
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+TY+ L+ G+ +EN E + + M+ +G PD+ TY+ ++ A++
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 36/290 (12%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L NG V + D A+ ++ M++ R P + FN L S R K++DL LG + M G
Sbjct: 71 LRNGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 129
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
E T I+++ C + ++L A
Sbjct: 130 I-----------------------------------EHDMYTMTIMINCYCRKKKLLFAF 154
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
++ + G P + LV C EG A+ +VD + + P ++ +TLI GL
Sbjct: 155 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 214
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ EA L+++M++ G PD VT+ +L LC G + A L + +
Sbjct: 215 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 274
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ Y I++ ++ + +L NEM +G D+ TY+S + GL N K
Sbjct: 275 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T +I R +K + A ++ + K G PD++TF+ L+ C GR +A L
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
PD +T L++G + R E L++ M++ GF PD TY ++ L + S
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ ++ A++++D F ++ +P V YNV+I G K +A + +
Sbjct: 521 IYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 579
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D PD T+NILI ++ L EM+ G + + + +I +R+
Sbjct: 580 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI-DMLSDRR 638
Query: 276 FDE 278
D+
Sbjct: 639 LDK 641
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 11/392 (2%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAT 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+ I+ F+ + A++++ + D + + R+ P + VL +K
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL-EHLMK 119
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
R F GFY+ ++ + FNIL+ FC++ +A +F + + G P+VVS
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ G+ DEG + M+ G + T +L++GLC E ++ A EL +
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G++P + L+ C G +A+E+ + + LP +I TLI GL +
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A L+++M +G+ PD T+ L++ C G A + R + D + Y L+
Sbjct: 300 QAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALI 359
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
SG +E R + E ++ EML G PD+ TY
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDIGTYT 391
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI G K D A+ Y
Sbjct: 215 YSVLINGLCKESKMDDANELFDEM--LVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKX 272
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ ++ TLI G E
Sbjct: 273 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 332
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 333 LDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTM 392
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ +++ E+ + G++PSV+ L+ G
Sbjct: 393 IINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C +G+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 139 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ML G+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHC 258
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + ML + +PDL TYN+ + GL
Sbjct: 259 KNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGL 292
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R RE + ++ R F
Sbjct: 69 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWG 128
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L+ C GR A + ++ L PD +TY+ L+ G ++ K+ L++EM
Sbjct: 249 TFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEM 308
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 309 SMKGLKPDKFTYTTLIDG 326
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +LR G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 152/298 (51%), Gaps = 2/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P VS+YN LING K R++ + MV + P+V++++ LI+ + + +LA L
Sbjct: 243 PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSL 302
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE-LGCEFSSVTCEILVDGLC 306
+M ++GC+PN+ + ++L++G F + ++M +MI G + + V LV G C
Sbjct: 303 LAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFC 362
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G + KA + + G P Y L+ G+ A+ + +++ G P+V+
Sbjct: 363 SHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVV 422
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLL 425
T+++E L R K EA L+E M KE P TFN ++ LCD GR A+++ R +
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY+ L+ G + NR +E L E+ G +TYN+ + G NA
Sbjct: 483 EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNA 540
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 183/424 (43%), Gaps = 22/424 (5%)
Query: 63 TPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
+P + +I S++L L+ + H F + + F+H TF ++R LA
Sbjct: 34 SPNHAEIKESAVLKRLRQE-----SCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMD 88
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
+ + +L + CS D S + R A A R+ +
Sbjct: 89 GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE---------- 138
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
PSV IYN +++ + Y M RD +P+V T+N+L+ C+N K D
Sbjct: 139 -FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 197
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A L EM KGC PN VS+ T+I EG +A + +++ L+
Sbjct: 198 GAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNA-----LI 252
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC E EL+ + +G+ P Y L+ +L G +A ++ ++ K+G
Sbjct: 253 NGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCH 312
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-GILPDSVTFNCLLEDLCDVGRTVDADR 421
P++ ++L++G +A + +M++ G+ P+ V +N L++ C G A
Sbjct: 313 PNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVS 372
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L G P+ TY L++G+T+ + + N+ML G P++ Y S ++ L
Sbjct: 373 VFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALC 432
Query: 482 NARK 485
K
Sbjct: 433 RHSK 436
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 18/324 (5%)
Query: 175 LAFEAMRKLID--GRPSVSIYNVLING-FVKCREFDKALGFYDRMVRD-RVKPDVVTFNI 230
LAF + +++ P++ + L+ G FV+ FD AL +++M+R ++P+VV +N
Sbjct: 298 LAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD-ALDMWNQMIRGFGLQPNVVAYNT 356
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ GFC + D A+ +F M E GC+PN+ ++ +LI GF + V + +M+ G
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C + V +V+ LC + +A L+ S+ P + ++ LC G A
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476
Query: 351 EVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+V ++ ++ P+++ L++GL + + EA GL ++ G+ + T+N LL
Sbjct: 477 KVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHG 536
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD------ 463
C+ G A +L G PD +T ++++ Y ++ + + +MLD
Sbjct: 537 SCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAV----QMLDLVSCGR 592
Query: 464 EGFIPDLATYNSYMDGL--SNARK 485
+ PD+ +Y + + GL SN R+
Sbjct: 593 RKWRPDVISYTNVIWGLCRSNCRE 616
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVK--- 166
+ +V +L +F E S++ +S C S NAF+K
Sbjct: 422 VVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVP--------------TFNAFIKGLC 467
Query: 167 -ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
A R++ F M + P++ YN L++G K ++A G + V+
Sbjct: 468 DAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWST 527
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
T+N L+ G C +AL L +M G +P+ ++ N +I + + K + V M
Sbjct: 528 STYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM 584
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P VS+YN LING K ++ A MV + P+V++++ LI+ C + + +LA
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE-LGCEFSSVTCEILVDGLC 306
+M ++GC+PN+ + ++L++G F + +++ +MI G + + V LV G C
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G ++KA + G P Y L+ G+ A+ + +++ G P+V+
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLL 425
T ++E L R K EA L+E M KE P TFN ++ LCD GR A+++ R +
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY+ L+ G + NR +E L E+ G +TYN+ + G NA
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 168/396 (42%), Gaps = 21/396 (5%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
H F + + F+H TF ++R LA + + +L + CS D S
Sbjct: 60 LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 119
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ R A A R+ + PSV IYN +++ +
Sbjct: 120 VYRQVGLAERAVEMFYRIKE-----------FGCDPSVKIYNHVLDTLLGENRIQMIYMV 168
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y M RD +P+V T+N+L+ C+N K D A L EM KGC P+ VS+ T+I
Sbjct: 169 YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC- 227
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTC--EILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
V + E EL F V L++GLC E A EL+ + +G+ P
Sbjct: 228 ------EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV 281
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC G +A + ++ K+G P++ ++L++G +A L +
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 391 MLKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M++ G+ P+ V +N L++ C G V A + G P+ TY L++G+ +
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ N+ML G P++ Y + ++ L K
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 18/324 (5%)
Query: 175 LAFEAMRKLID--GRPSVSIYNVLING-FVKCREFDKALGFYDRMVRD-RVKPDVVTFNI 230
LAF + +++ P++ + L+ G F++ FD AL +++M+R ++P+VV +N
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNT 357
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ GFC + A+ +F M E GC+PN+ ++ +LI GF D V + +M+ G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C + V +V+ LC + +A L+ S+ P + ++ LC G A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 351 EVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+V ++ ++ P+++ L++GL + + EA GL ++ G+ S T+N LL
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD------ 463
C+ G A +L G PD +T ++++ Y ++ + + +MLD
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA----QMLDLVSCGR 593
Query: 464 EGFIPDLATYNSYMDGL--SNARK 485
+ PD+ +Y + + GL SN R+
Sbjct: 594 RKWRPDVISYTNVIWGLCRSNCRE 617
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREF 206
C R + +N F K ++ + + M L G P+V +Y ++ + +F
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM--LTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNT 265
+A + M ++ P V TFN I G C + D A +FR+M ++ C PN+V++N
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G + +E + E+ G E+SS T L+ G CN G A +LV G
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDG 558
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVD--ELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
P + ++ C +G A A +++D ++ P VI+ T +I GL R +
Sbjct: 559 KSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRED 618
Query: 384 ASGLMEKMLKEGILPD----SVTFNCLLEDLCDVGRTVD 418
L+E+M+ GI+P SV NC + D D+ R D
Sbjct: 619 GVILLERMISAGIVPSIATWSVLINCFILD--DIVRAHD 655
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 56/288 (19%)
Query: 92 DFHIFAWASTIDS-FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
D ++ W + S + + +V +L +F E S++ +S C
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA--------- 454
Query: 151 PEMERIFHFAVNAFVK----ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
P + NAF+K A R++ F M + P++ YN L++G K
Sbjct: 455 PSVP-----TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
++A G + V+ T+N L+ G C +AL L +M G +P+ ++ N +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL--VIDFSRR 324
I +AY C +G+ +A ++ ++ RR
Sbjct: 570 I--------------LAY---------------------CKQGKAERAAQMLDLVSCGRR 594
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
P Y ++ LC + +++ + G +PS+ + LI
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 158/292 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K ++FD + ++M R + + T+NILI+ FCR + LAL L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G ++T L+ GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL +++++ V+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R +A L ++M +GI P+ VT++ L+ LC GR DA +L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L ++M+ PD+ TYNS ++G
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 7/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M E V ++D LC V A L + +G+ P Y L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++ ++ +K P+++ LI+ + K VEA L + M+K I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+N L+ C R A ++ +K PD +TY+ L+ G+ + R ++G
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL------SNARKSVRQ 489
L EM G + D TY + + GL NA+K +Q
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLAL L +M +VV FNT+I R D+ +
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LC+ GR A +L+ D + + P + L++
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ D++ K+ P + +L+ G + +A + E M+ + PD
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R D L S +GL D +TY L+ G + + + +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ TY+ +DGL N K
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGK 485
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 148/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI+ FVK +F +A YD M++ + PD+ T+N L++GFC + + D A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ ++G + EM G +VT L+ GL +
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ GV P Y L++ LC G ALEV D + K +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+IEG+ + K + L + +G+ P+ VT+N ++ LC +A L
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ + R+ + L+ EM F+ D +T + L + R
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 624
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y V++NG K + D AL ++M +++ DVV FN +I C+ + D AL
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE + VT L+D
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+ ++A +L D +R + P F Y LV C A ++ + + K P V+
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ + + L +M G++ D+VT+ L++ L G +A ++
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + + M D+ Y + ++G+ A K
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ +++ K ++D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P++VTFN LI F + KF A L+ +M ++ +P++ ++N+L+ GF
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ C VT L+ G C RV EL + S RG++ Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L +G+ A +V ++ G P ++ + L++GL K +A + + M K
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D + ++E +C G+ D L S KG+ P+ +TY+ ++SG + +E
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L+ +M ++G +P+ TYN+
Sbjct: 560 YALLKKMKEDGPLPNSGTYNT 580
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+G + MV+ R P +V FN L+S + KKFD+ + L +M+ + ++N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F + + + +M++LG E S VT L++G C+ R+ A LV
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + L+ L A A+ +VD + ++G P+++ ++ GL + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM I D V FN +++ LC DA L TKG+ P+ +TY L+S
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++M+++ P+L T+N+ +D K V +
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + KA +++DG F ++ L +P+V YN +I+G R +A +
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M D P+ T+N LI R+ + L REMR
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 165/336 (49%), Gaps = 14/336 (4%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F +NAFVK +++ L E +R+ I P+ Y+ +I+GF K + A +D
Sbjct: 153 FSALINAFVKEGKVSGAEELYREMLRRNI--FPTTITYSSMIDGFCKHSRLEDAKHMFDL 210
Query: 216 MVRDRVKPDVVTFNILISGFCRNKK-----------FDLALGLFREMREKGCNPNVVSFN 264
MV PD++T N LI G CR K+ ++A LF+EM G +P++V+ N
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TL+ G K ++ + M + + + TC I+++G+C +V +A +L
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
GV Y L+ EGN A ++ E+ KG +PS + ++++G + + EA
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+++ M+ EG PD VTF+ L++ C GR D L +GL D +TY+ L+ G
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHG 450
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + +++ EM+ G PD T+ S + GL
Sbjct: 451 FCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 169/389 (43%), Gaps = 51/389 (13%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
CP F +N + R+ L + M + +G +P Y ++NG K +
Sbjct: 6 CPANVVTFTTLMNGLCREGRVLQALALVDRMVE--EGHQPDAVTYGTIVNGMCKLGDTVS 63
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL +M ++K +VV ++ ++ C++ A +F EM EKG PNV+++N +I
Sbjct: 64 ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMID 123
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ K+ + + +MIE + VT L++ EG+V A EL + RR + P
Sbjct: 124 GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV------ 382
Y +++ C A + D + KG P +I TLI+G R ++ +
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQ 243
Query: 383 -----EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTK------- 429
A L ++M+ G+ PD VT N LL LC+ G+ A + ++ +K
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303
Query: 430 ---------------------------GLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
G++ D +TY+IL+ + +E E++ EML
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363
Query: 463 DEGFIPDLATYNSYMDGL--SNARKSVRQ 489
+G IP TYNS +DG N + RQ
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQ 392
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 11/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +I+G+ ++ A M+ + PDVVTF+ LI+ F + K A L
Sbjct: 113 PNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEEL 172
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG--- 304
+REM + P ++++++I GF + ++ +M M+ GC +T L+DG
Sbjct: 173 YREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCR 232
Query: 305 --------LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
C G V A +L + GV P L+ LC G ALE+
Sbjct: 233 AKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVF 292
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K C +I G+ + K EA L + G+ D VT+N L+ G
Sbjct: 293 QKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNF 352
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+ A+ + L KG+ P +TY+ +V G+ ++NR +E +V+ M+ EG PD+ T+++
Sbjct: 353 LRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTL 412
Query: 477 MDGLSNARK 485
+ G A +
Sbjct: 413 IKGYCKAGR 421
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +VVTF L++G CR + AL L M E+G P+ V++ T++ G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+NM +M E + + V +VD LC +G +KA + + +G+ P Y
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C G A +++ ++ ++ P V+ + LI + K A L +ML+
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR---- 451
I P ++T++ +++ C R DA + L +KG PD +T + L+ G R R
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 452 -------KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++L EM+ G PD+ T N+ + GL K
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGK 281
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 3/252 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ F + +N F+ M + +G P + N L+ G + + +KAL + +
Sbjct: 238 IHGFCQVGNVNVAQDLFQEM--ISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKS 295
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ D T NI+I+G C+ K D A LF + G +VV++N LI F E F
Sbjct: 296 KMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRA 355
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ EM+ G S+VT +VDG C + R+ +A ++V G P + L++
Sbjct: 356 EDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKG 415
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C G LE+ E+ ++G + I LI G ++ A + E+M+ G+ PD
Sbjct: 416 YCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPD 475
Query: 400 SVTFNCLLEDLC 411
++TF +L LC
Sbjct: 476 TITFRSMLAGLC 487
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 142 CSNDGIFSCPEMERIFH------------FAVNAFVKANRMNDGLLAFEAMRKLIDG-RP 188
C N + EM ++F +N K N++++ F ++ ++G
Sbjct: 277 CENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLP--VNGVET 334
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
V YN+LI FVK F +A Y M+ + P VT+N ++ GFC+ + + A +
Sbjct: 335 DVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMV 394
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M +GC+P+VV+F+TLI+G+ + D+G+ + EM + G ++T L+ G C
Sbjct: 395 DSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKV 454
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
G + A ++ + GV P + ++ LC + L ++++L K
Sbjct: 455 GDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 2/301 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V Y+ +I+G K + +AL + M V PDV T+ I++ CR K D A
Sbjct: 7 EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M E+GC+ N V++N LI G + + + EM G E ++T ++ GLC
Sbjct: 67 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD--ELWKKGNLPS 364
G+V +A + RG P Y GL++ L EG A + ++ + P
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+I TLI+G R+ K EA L + ++ +G +PD+VT+N +L L +A+ +
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+G TY I++SG+ R L EM ++ F PD+ N+ +D L A+
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306
Query: 485 K 485
K
Sbjct: 307 K 307
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 141/266 (53%), Gaps = 2/266 (0%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +PDVVT++ +ISG C+ K AL + EM EKG NP+V ++ ++ K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + ++MIE GC ++V L++GLC + + +A +L+ + + +G P + Y
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME--KMLK 393
++ LC G A + D + +G P V+A L++ L + K EA GL + M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ PD +T+N L++ C V +T +A +L KG PD +TY+ ++ G R++ E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
E + +M+D G P+ ATY+ + G
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSG 266
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 157/306 (51%), Gaps = 2/306 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRM-VRDR-VKPDVVTFNILISGFCRNKKFDLAL 245
P V YN L++ K + +A G + M + DR V PD++T+N LI GFCR +K D A+
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAM 207
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF+++ KG P+ V++N+++ G + DE M +M++ GC + T I++ G
Sbjct: 208 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G + + EL + + + P +++ LC A +V++E+ K G +P V
Sbjct: 268 CRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ L++GL + +A L M+ G PD V+++ +L LC + DA L
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L PD +T++IL+ G + + E ++L++ M + +PD T + M GL ++
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 486 SVRQTR 491
+ R
Sbjct: 448 TDEAVR 453
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 154/320 (48%), Gaps = 4/320 (1%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +K++D P+ + Y+++++G + + L Y+ M R PDV+ N +I
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ KK D A + EM + G P+VV++N L+ G D+ + M++ GC
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V+ ++++GLC +V A L R ++P + L++ LC G A +++
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D + + LP + CTTL+ GL R ++ EA L + M+++G + D + N +L LC
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480
Query: 414 GRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G+ A ++ S PD +TY LV+ R + + +M G PD
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540
Query: 472 TYNSYMDGLSNARKSVRQTR 491
YN+ M+GL + ++ R
Sbjct: 541 AYNTLMNGLRKQGRHIQADR 560
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 5/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ F + + ++ + F+ + + G P YN ++ G + D+A + +
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDV--IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV P+ T++I++SG CR L L+ EM EK +P+V+ N +I +K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + EM ++G VT IL+DGLC V KA EL G P Y
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC A + D + ++ +P V+ L++GL + K EA L++ M +
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+LPD VT L+ LC RT +A RL KG D + ++I+++G RE + +
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487
Query: 456 NLVNEML--DEGFIPDLATYNSYMDGLSNA 483
M+ D F PD+ TY + ++ L A
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEA 517
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V + N +I+ K ++ D A + M + PDVVT+NIL+ G C+ D A L
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M + GC P++VS++ ++ G K + + MIE VT IL+DGLC
Sbjct: 350 FSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 409
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A +L+ S VLP L+ LC + A+ + + +KG + V+
Sbjct: 410 AGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLP 469
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG--ILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++ GL R K +A + M+K PD VT+ L+ L + GR A
Sbjct: 470 HNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQ 529
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+ G PD + Y+ L++G ++ R + + L M ++GF+ D
Sbjct: 530 MTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 127/276 (46%), Gaps = 3/276 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ KA +++D E M K I P V YN+L++G K DKA + MV +
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSK-IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD+V+++++++G C+ K A LF M E+ P+VV+FN L+ G K DE
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M E VTC L+ GLC + R +A L +G + + ++ L
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477
Query: 341 CGEGNAGIALEVVDELWKKGN--LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EG AL + K P V+ TTL+ L + +A ++M G P
Sbjct: 478 CREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAP 537
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
D V +N L+ L GR + ADRL KG D
Sbjct: 538 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%)
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+ +G P Y ++ LC G ALE+V+E+ +KG P V T +++ L R K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA L KM++ G ++V +N L+ LC A +L ++KG +PD +TY+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++SG R + E + + M G+ PD+ YN +D L
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 160
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 52/263 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L + + H + + + N C P++ + +N K
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA---------PDIVS-YSVVLNGLCKT 375
Query: 168 NRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
N+++D + F+ M RKL+ P V +N+L++G K + D+A D M V PD
Sbjct: 376 NKVHDARVLFDRMIERKLV---PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDG 432
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGC----------------------------- 256
VT L+ G CR+K+ D A+ LF+ M EKG
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492
Query: 257 --------NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+P+VV++ TL+ + D+ V+ +M GC V L++GL +
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552
Query: 309 GRVLKACELVIDFSRRGVLPKDF 331
GR ++A L +G L F
Sbjct: 553 GRHIQADRLTQAMKEKGFLSDCF 575
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 158/292 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K ++FD + ++M R + + T+NILI+ FCR + LAL L
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G ++T L+ GL
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL +++++ V+
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R +A L ++M +GI P+ VT++ L+ LC GR DA +L
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L ++M+ PD+ TYNS ++G
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 336
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 7/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 85 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M E V ++D LC V A L + +G+ P Y L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++ ++ +K P+++ LI+ + K VEA L + M+K I
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+N L+ C R A ++ +K PD +TY+ L+ G+ + R ++G
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL------SNARKSVRQ 489
L EM G + D TY + + GL NA+K +Q
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 124 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 182
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLAL L +M +VV FNT+I R D+ +
Sbjct: 183 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LC+ GR A +L+ D + + P + L++
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ D++ K+ P + +L+ G + +A + E M+ + PD
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 362
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R D L S +GL D +TY L+ G + + + +
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ TY+ +DGL N K
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGK 447
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 148/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI+ FVK +F +A YD M++ + PD+ T+N L++GFC + + D A +
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ ++G + EM G +VT L+ GL +
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ GV P Y L++ LC G ALEV D + K +
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+IEG+ + K + L + +G+ P+ VT+N ++ LC +A L
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ + R+ + L+ EM F+ D +T + L + R
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 586
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y V++NG K + D AL ++M +++ DVV FN +I C+ + D AL
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 243
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE + VT L+D
Sbjct: 244 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 303
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+ ++A +L D +R + P F Y LV C A ++ + + K P V+
Sbjct: 304 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 363
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ + + L +M G++ D+VT+ L++ L G +A ++
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + + M D+ Y + ++G+ A K
Sbjct: 424 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ +++ K ++D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSYGRWSDASQLLS 281
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P++VTFN LI F + KF A L+ +M ++ +P++ ++N+L+ GF
Sbjct: 282 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 341
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ C VT L+ G C RV EL + S RG++ Y
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 401
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L +G+ A +V ++ G P ++ + L++GL K +A + + M K
Sbjct: 402 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 461
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D + ++E +C G+ D L S KG+ P+ +TY+ ++SG + +E
Sbjct: 462 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 521
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L+ +M ++G +P+ TYN+
Sbjct: 522 YALLKKMKEDGPLPNSGTYNT 542
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+G + MV+ R P +V FN L+S + KKFD+ + L +M+ + ++N
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F + + + +M++LG E S VT L++G C+ R+ A LV
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + L+ L A A+ +VD + ++G P+++ ++ GL + A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM I D V FN +++ LC DA L TKG+ P+ +TY L+S
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++M+++ P+L T+N+ +D K V +
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 313
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + KA +++DG F ++ L +P+V YN +I+G R +A +
Sbjct: 469 IYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M D P+ T+N LI R+ + L REMR
Sbjct: 528 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 149/289 (51%), Gaps = 1/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGF-YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+ +LING+VK D+A F YD+M+++ +PDV TFN LI G C+ A+ + +M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
GC PN++++ TL+ GF + + +E + EM G E + + +L+ LC G+V
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
KA +++ + S +G P F + L+ LC AL + ++ G + + + TL
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I R EA L+ ML G D +T+N L++ C +G T A L K L
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P ++ ++L++G R + L+ +M+ G PD+ TYNS ++GL
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGL 635
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 148/286 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ Y L++GF K + ++A + M + +++ +N+L+ C+N K AL +
Sbjct: 413 PNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDM 472
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +KGC P++ +FNTLI G + ++ + + +M+ G ++VT L+
Sbjct: 473 LGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLR 532
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A +LV D RG + Y GL++ C G AL + DE+ +K +PS I+
Sbjct: 533 GGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNIS 592
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C LI GL R+ K A L+ M+ G+ PD VT+N L+ LC +G +A L
Sbjct: 593 CNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQ 652
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+G+ PD +TY+ L+ + R + L+ ++ FIP+ T+
Sbjct: 653 AEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 158/349 (45%), Gaps = 11/349 (3%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R D TF ++ L ++N +SAN C P + + ++ F
Sbjct: 377 RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCT---------PNL-ITYTTLLDGFC 426
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
K N++ + M ++ YNVL+ K + KAL M KPD+
Sbjct: 427 KKNQLEEAGYVLNEMSAK-GFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDI 485
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
TFN LI G C+ + + AL L+R+M G N V++NTLI F E + + +
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVND 545
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ GC +T L+ C G KA L + R+ ++P + L+ LC G
Sbjct: 546 MLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
ALE++ ++ +G P V+ +LI GL ++ EA L K+ EGI PD++T+N
Sbjct: 606 VCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNT 665
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
L+ C G DA L L P+ +T++ILVS + +E ++ G
Sbjct: 666 LICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 185/429 (43%), Gaps = 38/429 (8%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
NQITP F KL P IF WA + + H + ++ L ++ F
Sbjct: 65 NQITP-----FQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFK 119
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
+ +L I +GI E +F + + +AN L +A R L+D
Sbjct: 120 VIDKLLLQIK-------EEGI---AFRESLFICIMKYYGRAN------LPGQATRMLLDM 163
Query: 187 R------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+ P+ YNV+++ V A + M+ V P V TF +++ C +
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D A L R+M + GC PN V + TLI + +E + + EM +GC T
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE---LW 357
++ GLC R+ + +LV RG P D Y L+ LC G VDE L
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGK-------VDEAQVLL 336
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASG-LMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K P+ + T LI G + + EA+ L +KM+K G PD TFN L+ LC G
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
A + S G P+ +TY L+ G+ ++N+ +E ++NEM +GF ++ YN
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456
Query: 477 MDGLSNARK 485
+ L K
Sbjct: 457 LRALCKNGK 465
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 167/332 (50%), Gaps = 10/332 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + + NR+++G + R L G P+ Y VL+NG + + D+A +
Sbjct: 281 FNDVIYGLCRLNRIHEGAKLVD--RMLFRGFTPNDITYGVLMNGLCRVGKVDEA-----Q 333
Query: 216 MVRDRV-KPDVVTFNILISGFCRNKKFDLALG-LFREMREKGCNPNVVSFNTLIRGFFGE 273
++ ++V P+ V F ILI+G+ ++ + D A L+ +M + GC P+V +FNTLI G +
Sbjct: 334 VLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKK 393
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
V+M +M GC + +T L+DG C + ++ +A ++ + S +G Y
Sbjct: 394 GLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGY 453
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC G AL+++ E+ KG P + TLI GL ++ + +A L ML
Sbjct: 454 NVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G++ ++VT+N L+ G +A +L +G D +TY+ L+ + + ++
Sbjct: 514 DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEK 573
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +EM+ + +P + N ++GL K
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +R +I P V YN LING K +A ++++ + ++PD +T+N LI
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLIC 668
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
CR FD A L E PN V++ L+ F E + G++
Sbjct: 669 WHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISFG 718
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 9/316 (2%)
Query: 168 NRMNDGLL-------AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N M DGL A E + +++ P+V Y +LI+GF K F++A + M
Sbjct: 376 NIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ + V +N LI C++ K AL ++ EM KGC P++ +FN+LI G K +E
Sbjct: 436 KGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEE 495
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + +M+ G ++VT L+ + +A +LV + RG + Y GL++
Sbjct: 496 ALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIK 555
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G L ++++++ + PS+ +C LI R K +A + M++ G+ P
Sbjct: 556 ALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTP 615
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT+N L+ LC +GR +A L KG+ PD +TY+ L+S Y E + L+
Sbjct: 616 DIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675
Query: 459 NEMLDEGFIPDLATYN 474
+ + GFIP+ T++
Sbjct: 676 FKGVSNGFIPNEITWS 691
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 144/294 (48%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGF-YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ +YN LING+V F++A Y MV +PD TFNI+I G C+ AL
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
EM +KG PNV+++ LI GF + F+E + M G ++V L+ LC
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G++ A ++ + S +G P + + L+ LC AL + ++ +G + + +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI RL +A L+ +M G D++T+N L++ LC G T L
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P + +IL++ + R + + + +M+ G PD+ TYNS ++GL
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGL 627
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 132/283 (46%), Gaps = 6/283 (2%)
Query: 177 FEAMRKLIDGRPSVSI------YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
FE K+++ + + YN LI K + AL Y M KPD+ TFN
Sbjct: 423 FEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNS 482
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI G C+N K + ALGL+R+M +G N V++NTLI F + + EM G
Sbjct: 483 LIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C ++T L+ LC G K L+ + P L+ C G AL
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ + ++ ++G P ++ +LI GL ++ + EA L + +GI PD+VT+N L+
Sbjct: 603 QFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
C G DA +L + G P+ +T+ IL++ + + N E
Sbjct: 663 CYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSE 705
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 193/462 (41%), Gaps = 51/462 (11%)
Query: 38 TLPSVTLTPTAHH-----THLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYD 92
+ P T TP + +LL+ L + N ITPS L KL P
Sbjct: 23 SFPLCTTTPLGKNDDTEWENLLKPYDLKHLQRSLNPITPSQL-----CKLLELPLDVPTS 77
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
+F A + H + ++ L + F + +L + C +F
Sbjct: 78 MDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGC------VFK--- 128
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG------RPSVSIYNVLINGFV--KCR 204
E +F + + KA L +A R L+D P+ YNV++ V C
Sbjct: 129 -ESLFILIMRYYGKAG------LPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCP 181
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ + FYD + R + P V TF +++ FC + D A L R+M + GC PN + +
Sbjct: 182 KVAPNV-FYDMLSRG-ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQ 239
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI + +E + + EM +GCE T ++ GLC GR+ +A +L
Sbjct: 240 MLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL-----HD 294
Query: 325 GVLPKDFDYFGLVE-----KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+L +DF L++ LC G A ++ ++ P+ + TLI G
Sbjct: 295 RMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSG 350
Query: 380 KGVEASGLMEK-MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ EA L+ K M+ G PD+ TFN +++ LC G V A KG +P+ +TY
Sbjct: 351 RFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITY 410
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
IL+ G+ ++ +E +VN M +G + YN + L
Sbjct: 411 TILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 46/303 (15%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ ++ F E V+N +SA + G ++C + A
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG-YNC---------LIGAL 452
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K ++ D L + M +P + +N LI G K + ++ALG Y M+ + V +
Sbjct: 453 CKDGKIQDALQMYGEMSSK-GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF-------------- 270
VT+N LI F R + A L EMR +GC + +++N LI+
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571
Query: 271 --FGER-------------------KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
FGE K ++ + +MI+ G VT L++GLC G
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMG 631
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
R +A L +G+ P Y L+ + C EG A +++ + G +P+ I +
Sbjct: 632 RFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWS 691
Query: 370 TLI 372
LI
Sbjct: 692 ILI 694
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N+F + ++ND A + +R +I P + YN LING K F +AL ++ +
Sbjct: 589 INSFCRTGKVND---ALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQA 645
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ PD VT+N LIS +C F+ A L + G PN ++++ LI F
Sbjct: 646 KGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 3/188 (1%)
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE-GNAGIALEVVDELWK 358
+L+D L N G +L+ G + K+ F L+ + G+ G G A ++ ++W
Sbjct: 99 LLIDKLGNVGEFKMIDKLLKQMKDEGCVFKE-SLFILIMRYYGKAGLPGQATRLLLDMWG 157
Query: 359 KGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P+ + ++E L A + ML GI P TF +++ C V
Sbjct: 158 VYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVD 217
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L + G P+ + Y +L+ + NR E L+ EM G PD+ T+N +
Sbjct: 218 SACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVI 277
Query: 478 DGLSNARK 485
GL A +
Sbjct: 278 HGLCKAGR 285
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 1/202 (0%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M + GC F +++ G +A L++D F + +V ++ G
Sbjct: 119 QMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAG 178
Query: 345 NA-GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
N +A V ++ +G P+V +++ + + A L+ M K G +P+S+ +
Sbjct: 179 NCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIY 238
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L+ L + R +A +L G +PD T++ ++ G + R E L + ML
Sbjct: 239 QMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLL 298
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
F D M GL K
Sbjct: 299 RDFTADALIQGYLMHGLCRMGK 320
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 59/393 (15%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P H +N+F NR+ AF + K++ +P + + LI G +
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRVG---FAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+M+ + +PDVVT+ LI+G C+ A+ L M +K C PNV ++NT
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ EM+ G CE+ V
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG+V +A ++V +RGV P Y L++ C A+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 351 EVVDELWKKGNLPSVIACTTLIEG---LRRLRKGVEASGLM----------------EKM 391
+V D + KG +P+VI+ TLI G ++R+ K + + LM + M
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +G +P+ +++N L+ C + R A L + L PD +TY L+ G R
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++ L +EM+ IP+L TY +D L R
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 479
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 153/318 (48%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++ + +F M ++ PS +N L+ K + L +M + P++ T
Sbjct: 40 NTIDGAISSFNRMLRM-QPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT 98
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ILI+ FC + A + ++ + G P+ +F TLIRG E K E +++ +MI
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G VT L++GLC G A L+ ++ P F Y +++ LC +
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ KG P + +LI L L + + L+ +M+ I+PD V+FN ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ +A + +G++P+ +TY L+ G+ + E + + M+ +G +
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 468 PDLATYNSYMDGLSNARK 485
P++ +YN+ ++G ++
Sbjct: 339 PNVISYNTLINGYCKIQR 356
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 21/333 (6%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+ +++D + P V +N +++ K + +A D+M++ V+P+VVT+ L+ G C
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK-------------------FDE 278
+ D A+ +F M KGC PNV+S+NTLI G+ ++ DE
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDE 378
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V + M+ GC + ++ L++G C R+ KA L + R+ ++P Y L+
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 438
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC A+ + E+ +P+++ L++ L + R EA L++ + + P
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 498
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D N ++ +C G A L S+KGL PD TY I+++G R E L
Sbjct: 499 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 558
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
EM + G + YN+ G ++ R +
Sbjct: 559 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 591
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 160/357 (44%), Gaps = 29/357 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ V+A K ++ + A + + K+I P+V Y L++G E D+A+ +D
Sbjct: 274 FNTVVDALCKEGKVTE---AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLAL-------------------GLFREMREKG 255
MV P+V+++N LI+G+C+ ++ D A+ +F M KG
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG 390
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PNV+S+NTLI G+ ++ D+ + + EM +VT L+ GLC+ R+ A
Sbjct: 391 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 450
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L + +P Y L++ LC A+ ++ + P + I+G+
Sbjct: 451 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 510
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R + A L + +G+ PD T++ ++ LC G +A +L G +G
Sbjct: 511 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 570
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM-----DGLSNARKSV 487
Y+ + G+ R N L+ EM+ GF D +T ++ DGL + K +
Sbjct: 571 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQI 627
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 13/305 (4%)
Query: 150 CPEMERIFHFA--VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCRE 205
CP+ +F F+ +N K R+++G L F+ M R L+ P+ + LI+G K +
Sbjct: 315 CPD---VFTFSALINGLCKEGRLDEGSLLFDEMCGRGLV---PNGVTFTTLIDGQCKGGK 368
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D AL + M+ V+PD+VT+N LI+G C+ A L EM G P+ ++F T
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G + + + + M+E G E V L+ GLC EGRV A ++ D G
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P D Y +++ C +G+ + +++ E+ G++P V+ L+ GL + + A
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAK 548
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L++ ML G+ P+ +T+N LL+ G +VD D + S KGL D +Y LV+
Sbjct: 549 MLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVD---IFNSEKGLVTDYASYTALVNES 605
Query: 446 TRENR 450
++ ++
Sbjct: 606 SKTSK 610
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F KA + + L F+ + K RP+V +N LI+G K + ++ M
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKR-GLRPTVVSFNTLISGCCKSGDVEEGFRLKGVM 309
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PDV TF+ LI+G C+ + D LF EM +G PN V+F TLI G K
Sbjct: 310 ESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKV 369
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + M+ G VT L++GLC G + +A LV + + G+ P + L
Sbjct: 370 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTL 429
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +G+ ALE+ + ++G +A T LI GL R + +A ++ ML G
Sbjct: 430 IDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGF 489
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ +++ C G +L + G P +TY+ L++G ++ + K +
Sbjct: 490 KPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKM 549
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L++ ML+ G P+ TYN +DG S SV
Sbjct: 550 LLDAMLNVGVAPNDITYNILLDGHSKHGSSV 580
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 175/388 (45%), Gaps = 15/388 (3%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC--PEMER------- 155
FRH ++ ++ L + HS+++F+ + S +FS M R
Sbjct: 115 FRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHS 174
Query: 156 ---IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR--EFDKAL 210
+F ++A+V + D + F + K P N L+ V+ R E +++
Sbjct: 175 VGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCEN-LLRRVVRLRPVEIERSW 233
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y ++ P + FN+L+ GFC+ A +F E+ ++G P VVSFNTLI G
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGC 293
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+EG + M G T L++GLC EGR+ + L + RG++P
Sbjct: 294 CKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNG 353
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L++ C G +AL+ + +G P ++ LI GL ++ EA L+ +
Sbjct: 354 VTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 413
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M G+ PD +TF L++ C G A ++ +G++ D + + L+SG RE R
Sbjct: 414 MTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGR 473
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ ++ +ML GF PD TY +D
Sbjct: 474 VHDAGRMLTDMLSAGFKPDDPTYTMVID 501
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
E + + LEV+D G P + L+ G + A + +++ K G+ P V+
Sbjct: 230 ERSWALYLEVLDS----GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVS 285
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
FN L+ C G + RL+ + ++G+ PD T+ L++G +E R EG L +EM
Sbjct: 286 FNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC 345
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
G +P+ T+ + +DG K
Sbjct: 346 GRGLVPNGVTFTTLIDGQCKGGK 368
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DGR-PSVSIYNVLINGFVKCREF 206
CP ++ ++A K + + A + ++K+I DG P V YN +++G K
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEE---ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
++AL ++ M R P+ + N +I G C+ K D A +F EM + P+ S+ L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G K +E + M++ G S+VT +++ G+C + +A EL +G
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F + L++ C G A ++ + G++P V+ +TLI GL + + +A
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+E M+K P VT N L+ LC GR +A + + G PD +TY+ LV G+
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R + + L+++M+ G P++ TY + + GL A +
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 148/341 (43%), Gaps = 1/341 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C R + + + ++++ F M D P Y +LI+G K + +
Sbjct: 144 LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR-DIPPDSWSYGILIDGLAKAGKLN 202
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A + RM+ + P VT+N++I G C D AL LF+ MR KGC P+ +FN LI
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
K DE + M + G VT L+ GLC+ RV A L+ D +R
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P L+ LC G A EV+D + G P V+ TL+ G R + A L
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M+ G+ P+ VT+ L+ LC R +A + + G P+ TY L+ G+
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ G L EM+ G PD Y + L + +S R
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 4/297 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y +LI+G K + + A + +++ V P V + LI G C FD A L
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M +GC P+ V++N +I +E ++ +MIE G VT ++DGLC
Sbjct: 68 FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV +A L + R G P + ++ LC + A +V E+ + P +
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+GL + K EA L +ML GI P +VT+N ++ +C + T+D + L L S
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMC-LAYTLD-EALELFKS 245
Query: 428 --TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+KG P T++IL+ + + + E L+ M D+G +PD+ TY++ + GL +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ KA ++ND A + +KL+ PS Y LI+G FD A +
Sbjct: 13 YGILIDGLAKAGKLND---ARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R P VT+N++I C+ + A L ++M E G P+VV++NT++ G
Sbjct: 70 DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG 129
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E + + EM LGC + + ++ GLC + ++ +AC++ + R + P + Y
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G A ++ + G PS + +I G+ EA L + M +
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P TFN L++ C G+ +A RL + G PD +TY L+SG R +
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+L+ +M+ P + T N+ + GL A + +++ R
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR-IKEAR 345
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 131/332 (39%), Gaps = 44/332 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++A K +M++ AF ++++ D P V Y+ LI+G D A +
Sbjct: 258 FNILIDAHCKRGKMDE---AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV+ + KP VVT N LI G C+ + A + M G +P+VV++NTL+ G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + +M+ G + VT LV GLC R+ +AC + G P F Y
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G L++ E M+
Sbjct: 435 ALILGFCSAGQVDGGLKLFGE-----------------------------------MVCA 459
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM---TYHILVSGYTRENRR 451
GI PD V + L +LC GR+ A + L + L + Y V G +
Sbjct: 460 GISPDHVVYGTLAAELCKSGRSARALEI-LREGRESLRSEAWGDEVYRFAVDGLLDAGKM 518
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ V +M+ G +P S + GL +
Sbjct: 519 EMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E+ +P+ S+ LI G K ++ ++ +++ G S+V L+ GLC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A EL D +RRG P Y +++ C G A +++ ++ + G++P V+ T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+++GL + + EA L +M + G P+ + N ++ LC + A ++ +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ PD +Y IL+ G + + E L MLD G P TYN + G+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%)
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+ R V P + Y L++ L G A ++ +L G PS +A T+LI GL
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L M + G P VT+N +++ C G +A L G PD +TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ G + R +E L NEM G P+ ++N+ + GL K
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK 165
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 203/467 (43%), Gaps = 57/467 (12%)
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ QI + + +K++ +D A A + FRH H TF ++ L S+ F
Sbjct: 10 SKQIGSAQVAQLIKAERDIQKAIVIFDS---ATAEYTNGFRHSHQTFSLMISRLVSANHF 66
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID 185
+L + C + D IF A+ + ++ D + F M++ +
Sbjct: 67 RLAEELLCRMKEEKCNITED----------IFLSICRAYGRVHKPLDAVRVFRKMKEY-E 115
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK-KFDLA 244
PS Y + V + AL FY M + P V + N+LI C+N D A
Sbjct: 116 CEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAA 175
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +FREM +GC P+ ++ TLI G K E + EM C + VT L+ G
Sbjct: 176 LRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHG 235
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC + A L+ + + +G+ P F Y L++ C G + ALE++D + + +LP+
Sbjct: 236 LCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPN 295
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD---- 420
+I +TL+ GL + K EA ++++M +G+ PD+ + ++ CD+ + +A
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLD 355
Query: 421 -------------------------------------RLRLLASTKGLDPDGMTYHILVS 443
+L L T+G+ D T+ LV+
Sbjct: 356 EMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVN 415
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ + + +LV+EM+ +G IPD T+N+ + + RK VR++
Sbjct: 416 YFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRK-VRES 461
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V Y+ L++G K +AL D MV R P+++T++ L+ G C+ K A+
Sbjct: 258 KPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVE 317
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE------- 299
+ M+ +G P+ + +I GF KF E N EM+ G + +T
Sbjct: 318 ILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHN 377
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I+V GLC E +A +L + RG+ + LV C +G+ A +VDE+
Sbjct: 378 IVVQGLCTE-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLD 436
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLME 389
G +P ++ RK E++ L++
Sbjct: 437 GCIPDEXTWNAVVCAFWDRRKVRESAELVQ 466
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ K ++ + + + M KL RP +Y +I+GF +F +A F D MV
Sbjct: 303 VHGLCKEGKLQEAVEILDRM-KLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGG 361
Query: 221 VKPDVVTF-------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ P+ +T+ NI++ G C + A L+ MR +G + + +F++L+ F +
Sbjct: 362 ISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNK 420
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ ++ EM+ GC T +V + +V ++ ELV
Sbjct: 421 GDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELV 465
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 184/387 (47%), Gaps = 13/387 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA +RHD + ++ L+ + VL + GI+ PE
Sbjct: 197 FYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRR-------GIYRTPEA-- 247
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + ++ +A ++ D L M++ P++ I N I+ FV+ +KAL F +R
Sbjct: 248 -FLRVMVSYSRAGQLRDALKVLTLMQR-AGVEPNLLICNTTIDVFVRANRLEKALRFLER 305
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VVT+N +I G+C + + A+ L +M KGC P+ VS+ T++ E++
Sbjct: 306 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKR 365
Query: 276 FDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E ++ +M E G VT L+ L +A + D +G Y
Sbjct: 366 IVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYS 425
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+V LC EG A ++++E+ KG+ P V+ T ++ G RL + +A L++ M
Sbjct: 426 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHT 485
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P++V++ LL LC G++++A + ++ + P+ +TY +L+ G +E + E
Sbjct: 486 HGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSE 545
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
++V EM+ +GF P N + L
Sbjct: 546 ACDVVREMVLKGFFPGPVEINLLLQSL 572
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 166/438 (37%), Gaps = 86/438 (19%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
+Q+T ++L+H L H H + F + FR D + IV +L R S
Sbjct: 385 DQVTYNTLIHMLTK--HDHADEALW----FLKDAEEKGFRIDKVGYSAIVHALCKEGRMS 438
Query: 127 ELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID 185
E ++N +S CP
Sbjct: 439 EAKDLINEMLSKGHCP-------------------------------------------- 454
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P V Y ++NGF + E DKA M KP+ V++ L++G CR K A
Sbjct: 455 --PDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAR 512
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ E+ +PN ++++ L+ G E K E ++ EM+ G V +L+ L
Sbjct: 513 EMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 572
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C +GR +A + + + +G ++ ++ C AL V+D+++ V
Sbjct: 573 CRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 632
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT----------------------- 402
TTL++ L + + EA+ LM+KML +GI P VT
Sbjct: 633 FTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEK 692
Query: 403 ----------FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+N ++E LC +G+ +AD+L D T + L+ GY +
Sbjct: 693 MILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPL 752
Query: 453 EGENLVNEMLDEGFIPDL 470
+ M + IPD+
Sbjct: 753 LAYKVACRMFNRNLIPDV 770
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 2/288 (0%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
+ + + AL M R V+P+++ N I F R + + AL M+ G PN
Sbjct: 255 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 314
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VV++N +IRG+ + +E + + +M GC V+ ++ LC E R+++ +L+
Sbjct: 315 VVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 374
Query: 320 DFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
++ G++ Y L+ L +A AL + + +KG + + ++ L +
Sbjct: 375 KMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKE 434
Query: 379 RKGVEASGLMEKMLKEGILP-DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA L+ +ML +G P D VT+ ++ C +G A +L + T G P+ ++
Sbjct: 435 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVS 494
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y L++G R + E ++N ++ + P+ TY+ M GL K
Sbjct: 495 YTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGK 542
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+LR ++ LM++ G+ P+ + N ++ R A R G+ P+ +
Sbjct: 260 QLRDALKVLTLMQR---AGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 316
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
TY+ ++ GY +R +E L+++M +G +PD +Y + M L ++ V
Sbjct: 317 TYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIV 367
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F VN F R+++ + + M ++ RP + + LING +AL DRM
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEM-KQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD VT+ +++ C++ LAL LFR+M E+ +VV ++ +I + F
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ +++ EM G + VT L+ GLCN+G+ +++ + R ++P + L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ +E+ +G P I +LI+G + EA+ + + M+ +G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT++ L+ C R D RL S+KGL P+ +TY+ LV G+ + + +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ G P + TY +DGL +
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCD 467
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + FE+M I RP + +N L + + +++D LGF M + ++ D+
Sbjct: 50 KVNDAIDLFESM---IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T I+I+ +CR KK A + + G P+ ++F+TL+ GF E + E V + M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+ VT L++GLC +GRV +A L+ G P + Y ++ +LC GN+
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+AL++ ++ ++ SV+ + +I+ L + +A L +M +GI D VT++ L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ G+ D ++ + + PD +T+ L+ + +E + E + L NEM+ G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 467 IPDLATYNSYMDG 479
PD TYNS +DG
Sbjct: 347 APDTITYNSLIDG 359
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ + +DG + +R++I GR P V ++ LI+ FVK + +A Y+ M+
Sbjct: 287 IGGLCNDGKWDDGA---KMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD +T+N LI GFC+ A +F M KGC P++V+++ LI + ++ D
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+G+ + E+ G +++T LV G C G++ A EL + RGV P Y L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ LC G ALE+ +++ K + +I G+ K +A L + +G+
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD VT+N ++ LC G +AD L G PD TY+IL+ + + L
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ EM GF D +T +D LS+ R
Sbjct: 583 IEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N R+++ L+ + M + +P Y ++N K AL + +M
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K VV ++I+I C++ FD AL LF EM KG +VV++++LI G + K+D+G
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M EMI VT L+D EG++L+A EL + RG+ P Y L++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C E A ++ D + KG P ++ + LI + ++ + L ++ +G++P++
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+N L+ C G+ A L ++G+ P +TY IL+ G + + +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + YN + G+ NA K
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASK 505
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 148/291 (50%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
++IN + + ++ A R + +PD +TF+ L++GFC + A+ L M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P++V+ +TLI G + + E + + M+E G + VT +++ LC G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+L R + Y +++ LC +G+ AL + +E+ KG V+ ++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L K + + ++ +M+ I+PD VTF+ L++ G+ ++A L T+G+ PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+TY+ L+ G+ +EN E + + M+ +G PD+ TY+ ++ A++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 36/290 (12%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L NG V + D A+ ++ M++ R P + FN L S R K++DL LG + M G
Sbjct: 42 LRNGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
E T I+++ C + ++L A
Sbjct: 101 I-----------------------------------EHDMYTMTIMINCYCRKKKLLFAF 125
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
++ + G P + LV C EG A+ +VD + + P ++ +TLI GL
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ EA L+++M++ G PD VT+ +L LC G + A L + +
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ Y I++ ++ + +L NEM +G D+ TY+S + GL N K
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T +I R +K + A ++ + K G PD++TF+ L+ C GR +A L
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
PD +T L++G + R E L++ M++ GF PD TY ++ L + S
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ ++ A++++D F ++ +P V YNV+I G K +A + +
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D PD T+NILI ++ L EM+ G + + + +I +R+
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI-DMLSDRR 609
Query: 276 FDE 278
D+
Sbjct: 610 LDK 612
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 198/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAA 60
Query: 151 P------EMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++DE+ KG P TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL PD TY ++V+ + ++ +G L+ EM +G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + A+ L KGL P+G+T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGL 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 37/366 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++++ + M L P++ Y+ LING+V + + A G M
Sbjct: 233 VNAFCKDGKVDEAAGFVKKMENL-GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC-NPNVVSFNTLIRGFFGERKFDEG 279
V +VVT+ +LI G+C+ K D A + R M+E+ P+ ++ LI G+ K D+
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + EM+ LG + + C L++G C G + +A ++ + P + Y L++
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ A + D++ ++G P+V+ TL++GL R+ +A + M+K G+ PD
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPD 471
Query: 400 SV-----------------------------------TFNCLLEDLCDVGRTVDADRLRL 424
V TFN ++ LC +G+ V+A+ +
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PDG+TY L+ GY + + + + M E P + YNS + GL +R
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591
Query: 485 KSVRQT 490
+ V T
Sbjct: 592 RLVEXT 597
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 161/371 (43%), Gaps = 67/371 (18%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN L+ G + FD AL + M++ V PD V ++ L+ G + + F+ A L
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTL 494
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++++ +G + ++FNT+I G K E + +M +LGC +T L+DG C
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Query: 308 EG-----------------------------------RVLKACELVIDFSRRGVLPKDFD 332
R+++ +L+ + RG+ P
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ C EG A E+ + G ++I C+T++ GL RL + EA+ LM+KM+
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 393 KEG--------------------------------ILPDSVTFNCLLEDLCDVGRTVDAD 420
G +LP+++ +N + LC G+ DA
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R + S KG PD TY L+ GY+ E L +EML G +P++ TYN+ ++GL
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794
Query: 481 SNARKSVRQTR 491
+ R R
Sbjct: 795 CKSENVDRAQR 805
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 15/397 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM-- 153
F + S +FR + ++ +V L+ + E + LN + + C + G E+
Sbjct: 89 FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-VDLCKFKDRGNVIWDELVG 147
Query: 154 --------ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCR 204
+F + +V+ + L F+ M K GR PS+ N L+N VK
Sbjct: 148 VYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC--GRIPSLRSCNSLLNNLVKNG 205
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E A Y +M+R + PDV +I+++ FC++ K D A G ++M G PN+V+++
Sbjct: 206 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + + M E G + VT +L+ G C + ++ +A +++
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 325 GVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
L D +G L++ C G A+ ++DE+ + G ++ C +LI G + + E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A G++ +M+ + PDS ++N LL+ C G T +A L +G++P +TY+ L+
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G R + + + M+ G PD Y++ +DGL
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 5/311 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + K +++ A + +++D +P YN L++G+ + +A D+M++
Sbjct: 374 INGYCKRGEIHE---AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ ++P V+T+N L+ G CR FD AL ++ M + G P+ V ++TL+ G F F+
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +++ G S +T ++ GLC G++++A E+ G P Y L++
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C N G A +V + ++ PS+ +LI GL + R+ VE + L+ +M G+ P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ L++ C G A + GL + + +VSG R R E L+
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670
Query: 459 NEMLDEGFIPD 469
+M+D GF PD
Sbjct: 671 QKMVDHGFFPD 681
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + + K +M++ M++ P Y VLI+G+ + + D A+ D M
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R +K ++ N LI+G+C+ + A G+ M + P+ S+NTL+ G+ E
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E N+ +M++ G E + +T L+ GLC G A ++ + GV P + Y L
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTL 478
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L N A + ++ +G S I T+I GL ++ K VEA + +KM G
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +T+ L++ C A +++ + + P Y+ L+SG + R E +
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTD 598
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L+ EM G P++ TY + +DG
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDG 621
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 153/356 (42%), Gaps = 33/356 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K +M + F+ M+ L P Y LI+G+ K +A M
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDL-GCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ + P + +N LISG ++++ L EM +G PN+V++ LI G+ E
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA-----------------CELVI 319
D+ + +EM E G + + C +V GL GR+ +A C L
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688
Query: 320 DFSRRGV---------------LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
D + LP + Y + LC G A L KG +P
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TLI G EA L ++ML+ G++P+ VT+N L+ LC A RL
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+ +TY+ L+ GY + L ++M++EG P + TY++ ++GL
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ A+ K +++D F +M L P Y LI+G+ D+A D
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFF-SMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R + P++VT+N LI+G C+++ D A LF ++ +KG PNVV++NTLI G+
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +MIE G S VT L++GLC G + ++ +L+ + GV K +Y
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 336 LVE 338
LV+
Sbjct: 895 LVQ 897
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN LI+G+ K D A D+M+ + + P VVT++ LI+G C++ + ++ L
Sbjct: 817 PNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKL 876
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+M + G + ++ + TL++G F ++E
Sbjct: 877 LNQMIKAGVDSKLIEYCTLVQGGFKTSNYNE 907
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 169/355 (47%), Gaps = 41/355 (11%)
Query: 172 DGLL--AFEAMRKLIDG--RPSVSIYNVLINGFVK------------------------- 202
+GLL AFE M + D +PS+ YN +ING K
Sbjct: 14 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 73
Query: 203 --------CRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
CR F +A + M+R V PD+V+F+ L++ F RN+ D AL FR+M+
Sbjct: 74 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMK 133
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P+ V + L+ G+ E + + EM+E GC + +++GLC E +
Sbjct: 134 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 193
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L + RG LP + + L+ C +GN AL + + ++ P ++A TLI
Sbjct: 194 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 253
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G ++ + +AS L + M+ I P+ +T+ L+ C VG +A RL + KG+
Sbjct: 254 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 313
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
P +T + ++ GY R + + + M+ +G PD +YN+ ++ R+SV
Sbjct: 314 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN--DGKRRSV 366
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + F + ++ L+ F M+K P IY VL++G+ + +AL D M
Sbjct: 109 FSSLMAVFSRNRHLDQALVYFRDMKKF-GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 167
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ DV+ +N +++G C+ K A LF EM E+G P+ +F TLI G +
Sbjct: 168 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNM 227
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +++ M + + V L+DG C G + KA EL R + P Y L
Sbjct: 228 TKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGIL 287
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G+ A + D + +KG P+++ C T+I+G R +A + +M+ +G+
Sbjct: 288 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGV 347
Query: 397 LPDSVTFNCLLED 409
PD +++N L+ D
Sbjct: 348 APDHISYNTLIND 360
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 4/283 (1%)
Query: 193 YNVLINGFVKCRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
YN LI + CRE ++A + M +KP + T+N +I+G C+ ++ A G+ E
Sbjct: 4 YNTLIGAY--CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M G +P+ ++NTL+ F E + EM+ G V+ L+
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A D + G++P + Y L+ C GN AL++ DE+ ++G + VIA T
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
++ GL + + +A L ++M++ G LPD TF L+ C G A L + +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ PD + Y+ L+ G+ + ++ L + M+ P+ TY
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITY 284
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+VT+N LI +CR + A + M +KG P++ ++N +I G + ++ +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
EM+ +G + T L+ C +A E+ + R+GV+P + L+
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ AL ++ K G +P + T L+ G R +EA + ++ML++G + D + +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
+L LC DAD+L +G PD T+ L+ G+ ++ + +L M
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 465 GFIPDLATYNSYMDGL 480
PD+ YN+ +DG
Sbjct: 241 NIKPDIVAYNTLIDGF 256
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 379 RKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
R+G+ EA +M M +G+ P T+N ++ LC GR A + + GL PD
Sbjct: 13 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTT 72
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
TY+ L+ R + E + + EML +G +PDL +++S M S R
Sbjct: 73 TYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+TY+ L+ Y RE +E ++N M D+G P L TYN+ ++GL + R
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 54
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K + + F M+++ P V +N LI+G+ KC E D+ + M
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEM-GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R K DVVT+N LI+ FC+ + + A G F M+ +G NVV+F+T + F E
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + +M G + T L+DG C GR+ A L+ + R+GV Y L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC E A +V+ + K G + + TTLI G + +A GL+ +M +G+
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D + L++ LC+V + +A L GL+P+ + Y ++ + + E
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ ++LD GF P++ TY + +DGL A
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKA 516
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ E MR+ + V YN LIN F K + A G++ M
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRR-SGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ V +VVTF+ + FC+ A+ LF +MR +G N ++ LI G +
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + + EM+ G + VT +LVDGLC E +V +A +++ + GV + Y L
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N+ AL ++ E+ KG + LI+GL + K EA L+ KM + G+
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ + + +++ G+ +A + G P+ +TY L+ G + E +
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
N+M D G P++ Y + +DGL
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGL 548
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 147/327 (44%), Gaps = 3/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F V+AF K + + + F MR + G + Y LI+G K D A+ D
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMR--VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDE 353
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR V +VVT+ +L+ G C+ +K A + R M + G N + + TLI G F +
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + EM G E L+ GLCN ++ +A L+ G+ P Y
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ G A+ ++ ++ G P+VI LI+GL + EA KM G
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG 533
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ + L++ LC G +A +L KG+ D + Y L+ GY ++ +
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF 593
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L +M+D G DL Y ++ G N
Sbjct: 594 ALKAKMIDSGLQLDLFCYTCFISGFCN 620
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 138/279 (49%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D++ R+ P+V TFNI+I C+ + A LF M+E GC P+VV+FN+L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ + DE + EM GC+ VT L++ C GR+ A R GV
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+ + V+ C EG A+++ ++ +G + T LI+G + + +A
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+++M+++G+ + VT+ L++ LC + +A+ + + G+ + + Y L+ G+
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ L++EM ++G D++ Y + + GL N K
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +Y LI+G + +KALG M ++ D+ + LI G C K D A
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E G PN + + T++ F K E + M ++++ G + + +T L+DGLC
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A G+ P Y LV+ LC G A+++ +E+ KG +
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T L++G + +A L KM+ G+ D + C + C++ +A +
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G+ PD Y+ L+S Y + +E +L +EM E +P ++ DG
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPSCTDSDTATDG 685
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 196/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + E S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D+ + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + V L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
++DE+ KG P I TTLI+G + A ++M++E I D V + L+
Sbjct: 301 VHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ GL PD TY ++++ + ++ +G L+ EM +G +P
Sbjct: 361 GLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + + P +F L+ + C +G+ +A V D + K G PSV++
Sbjct: 120 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G RL E L ML G+ PD T++ L+ LC + DA+ L
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+ + L+ G+ + R + +ML + +PDL TYN+ + GL
Sbjct: 240 VKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G +++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 196/432 (45%), Gaps = 46/432 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ----PEMER----IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+R +F + A++++ + D + + R+ P + VL +K
Sbjct: 61 IFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMK 119
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ F GFY+ ++ + FNIL+ FC++ +A +F + + G P+VVS
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVS 179
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ G+ DEG + M+ G + T +L++GLC E ++ A EL +
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEML 239
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G++P + L++ C G +A+E+ ++ + P +I TLI GL +
Sbjct: 240 VKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLED--------------------------------- 409
+A L+++M +G+ PD +T+ L++
Sbjct: 300 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALI 359
Query: 410 --LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G++VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +
Sbjct: 360 SGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 468 PDLATYNSYMDG 479
P + TYN M+G
Sbjct: 420 PSVVTYNVLMNG 431
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ IA V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+ +T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLSPDLITYNTLIYGL 292
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 189/410 (46%), Gaps = 13/410 (3%)
Query: 76 HFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFI 135
+ + S L P T F +F W+ R T I+ L F VL +
Sbjct: 62 YTITSVLQEQPD-TRLGFRLFIWSLKSWHLRC-RTVQDLIIGKLIKENAFELYWKVLQEL 119
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ S++ F + A+ +A + +F MR D +P + +N+
Sbjct: 120 KNSAIKISSEA----------FSVLIEAYSEAGMDEKAVESFSLMRDF-DCKPDLFAFNL 168
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+++ V+ F AL Y++M++ + PDVVT+ ILI G C+ K AL LF EM ++G
Sbjct: 169 ILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRG 228
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
PN + ++ ++ G +K + + +M GC +T +L++G C G + A
Sbjct: 229 ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAF 288
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L+ ++ G + Y L+ L A ++ ++ P V+ T +I GL
Sbjct: 289 TLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGL 348
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ + EA L+ +M + G+ PD++ +N L++ CD+G +A+ LRL S P+
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY IL+ G + + +++ EM G +P + T+NS ++GL A +
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 14/344 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++ +A ++ D F MR R ++ YNVL+NGF K D A
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT-YNVLLNGFCKSGYLDDAFTLLQL 293
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +D V+ + LI+G R ++++ A +++M + P+V+ + +IRG E +
Sbjct: 294 LTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGR 353
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + EM E G ++ L+ G C+ G + +A L ++ S+ P + Y
Sbjct: 354 VTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSI 413
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM---- 391
L+ +C G A + E+ K G LPSV+ +LI GL + + EA L +M
Sbjct: 414 LICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR 473
Query: 392 -------LKEGI--LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
L +G + D + ++E LC+ G + A +L + G+ PD TY+IL+
Sbjct: 474 KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILI 533
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+G+ + L EM +G +PD TY + +DGL A ++
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRN 577
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 36/323 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP YN LI GF D+A + + P+ T++ILI G C+N + A
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQH 429
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-----------IELGCE--F 293
+F+EM + GC P+VV+FN+LI G + +E + Y+M + G + F
Sbjct: 430 IFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVF 489
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ +++++ LC G +LKA +L++ GVLP Y L+ C GN A ++
Sbjct: 490 DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLF 549
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG++P + TLI+GL R + +A + E+M+K+G +P+S T+ ++ C
Sbjct: 550 KEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC-- 607
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP----- 468
+ + L S M Y G+ E R E+ NE L
Sbjct: 608 ----RENNISLALSV------WMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMD 657
Query: 469 ------DLATYNSYMDGLSNARK 485
DLA Y ++ GL A++
Sbjct: 658 IKSKNFDLAPYTIFLIGLVQAKR 680
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 198/428 (46%), Gaps = 15/428 (3%)
Query: 58 KTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVR 117
KT +L ++ P L S H Q TH I + + L V
Sbjct: 7 KTLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVI 66
Query: 118 SLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAF 177
S +F S+L++++ + + R++ +NA+V++ ++ + F
Sbjct: 67 SGKIQSQFFTSSSLLHYLTESE---------TSKTKSRLYEVIINAYVQSQSLDSSIYYF 117
Query: 178 EAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
M +D P + +N L+ V F++ F++ + +V DV +F I+I G
Sbjct: 118 NEM---VDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES-KIKVVLDVYSFGIVIKGC 173
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C + + + L E+RE G +PNVV + TLI G + + ++ ++ +EM + G +
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANE 233
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
T +L+ GL G + E+ GV P + Y ++ +LC +G A +V DE
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDE 293
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ ++G +++ TLI GL R K EA+ +M++M I P+ +T+N L++ C VG+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L ++GL P +TY++LVSG+ R+ +V EM + G P TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 476 YMDGLSNA 483
+D + +
Sbjct: 414 LIDTFARS 421
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 148/293 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLI+G K + Y++M V P++ T+N +++ C++ + A +F EMR
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G + N+V++NTLI G E K +E + +M + +T L+DG C+ G++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLG 355
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L D RG+ P Y LV C +G+ A ++V E+ ++G PS + T LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ R A L M + G++PD T++ L+ C G+ +A RL K L+
Sbjct: 416 DTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLE 475
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ + Y+ ++ GY +E L +M ++ P++A+Y+ + L RK
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IY LI+G K E +KA + M + + + T+ +LI G +N +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M+E G PN+ ++N ++ + + + + EM E G + VT L+ GLC
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + +A +++ + P Y L++ C G G AL + +L +G PS++
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ G R A+ ++++M + GI P VT+ L++ A +LR
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
GL PD TY +L+ G+ + + E L M+++ P+ YN+ + G S
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY 495
Query: 488 RQTR 491
R R
Sbjct: 496 RALR 499
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 36/312 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K R D F+ MR+ ++ YN LI G + + ++A D+M
Sbjct: 271 YNCVMNQLCKDGRTKDAFKVFDEMRER-GVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+++T+N LI GFC K AL L R+++ +G +P++V++N L+ GF +
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
M EM E G + S VT IL+D + A +L G++P Y L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +G EAS L + M+++ +
Sbjct: 450 IHGFCIKGQMN-----------------------------------EASRLFKSMVEKML 474
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ V +N ++ C G + A RL K L P+ +Y L+ +E + KE E+
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAED 534
Query: 457 LVNEMLDEGFIP 468
LV +M+D G P
Sbjct: 535 LVEKMIDSGIDP 546
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 6/262 (2%)
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+KAN N + M+ + P++ YN LI+GF + KAL + + P
Sbjct: 317 MKANEANK---VMDQMKSYVI-NPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPS 372
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+VT+N+L+SGFCR A + +EM E+G P+ V++ LI F + + +
Sbjct: 373 LVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRS 432
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M ELG T +L+ G C +G++ +A L + + P + Y ++ C EG
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEG 492
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
++ AL + ++ +K P+V + + LI L + RK EA L+EKM+ GI P N
Sbjct: 493 SSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICN 552
Query: 405 CLLEDLCD--VGRTVDADRLRL 424
+ D V + +DA L
Sbjct: 553 LISRAKTDSPVAQIIDASSFNL 574
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 198/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAA 60
Query: 151 P------EMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV++
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D + EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++DE+ KG P TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G P
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 SVVTYNVLMNG 431
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + A+ L KGL P+G+T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGL 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 174/372 (46%), Gaps = 41/372 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K + ++ + M+K G+ + Y+ LI+G D A Y M
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGLCGSGNLDGATRVYKEM 316
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PDVV +N +++G+ R + + L L++ M ++GC VVS+N LIRG F K
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKV 375
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDFDYFG 335
DE +++ + E C S+T +LV GLC G + KA ++ + RG L F Y
Sbjct: 376 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAYSS 434
Query: 336 LVEKLCGEGNAGIALEVVDELWK-----------------------------------KG 360
++ LC EG V+D++ K KG
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD-A 419
P+V+ TLI GL + + EA L+++ML +G P+ +T++ L+ LC G+ +D A
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ-GKKLDMA 553
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L A KG PD ++I++ G + ++ L +EM +P+L T+N+ M+G
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613
Query: 480 LSNARKSVRQTR 491
R R ++
Sbjct: 614 FYKVRDFERASK 625
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 157/335 (46%), Gaps = 15/335 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
++ ++R L + + E S+ + C C++ + V+ K
Sbjct: 360 VSYNILIRGLFENAKVDEAISIWELLPEKDC-CADSMTYG---------VLVHGLCKNGY 409
Query: 170 MNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+N L E +GR + Y+ +ING + D+ G D+M + KP+
Sbjct: 410 LNKALSILEEAE---NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHV 466
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
N +I+GF R K + AL F M KGC P VV++NTLI G +F E + EM+
Sbjct: 467 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 526
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + +T +L++GLC ++ A L +G P + ++ LC G
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVE 586
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
AL++ E+ ++ +P+++ TL+EG ++R AS + + +L+ G PD +++N L
Sbjct: 587 DALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITL 646
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+ LC R DA A +G+ P +T++ILV
Sbjct: 647 KGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 183/448 (40%), Gaps = 52/448 (11%)
Query: 69 ITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSEL 128
++P ++ LKS+ + H + IF + + H F I++ L + +
Sbjct: 8 LSPKRVIKLLKSEKNPHSALS-----IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHV 62
Query: 129 HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
++ I C C D + + A+ K + + L F+ M ++ +P
Sbjct: 63 SRIVELIRTQKCKCPEDVALT----------VIKAYAKNSMPDQALDIFQRMHEIFGCQP 112
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ YN L+N ++ ++D+A F+ + P++ T+NILI CR K+FD A L
Sbjct: 113 GIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELL 172
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M E+G +P+V S+ TLI + + + EM E G IL+DG +
Sbjct: 173 NWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232
Query: 309 GRVLKACE--------------------LVIDFSRRGVLPKDFD---------------- 332
G +L A E ++ + G + F+
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ LCG GN A V E+ + G P V+ T++ G R + E L + M
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
KEG V++N L+ L + + +A + L K D MTY +LV G +
Sbjct: 353 KEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +++ E + D Y+S ++GL
Sbjct: 412 KALSILEEAENGRGDLDTFAYSSMINGL 439
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 130/254 (51%), Gaps = 1/254 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R+++ + M K +P+ + N +INGFV+ + + AL F+ MV
Sbjct: 436 INGLCREGRLDEVAGVLDQMTKH-GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P VVT+N LI+G + ++F A L +EM KG PN+++++ L+ G +K D +
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ + +E G + I++ GLC+ G+V A +L + +R +P + L+E
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ A ++ D + + G P +I+ ++GL + +A G + + G+LP +
Sbjct: 615 YKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 674
Query: 401 VTFNCLLEDLCDVG 414
+T+N L+ + D G
Sbjct: 675 ITWNILVRAVLDNG 688
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 48/276 (17%)
Query: 106 RHDHTTFLF--IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
R D TF + ++ L R E+ VL+ ++ + C + + +N
Sbjct: 424 RGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH----------GCKPNPHVCNAVING 473
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
FV+A+++ D L F M P+V YN LING K F +A M+ KP
Sbjct: 474 FVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532
Query: 224 DVVTFNILISGFCRNKKFDLALG-----------------------------------LF 248
+++T+++L++G C+ KK D+AL L+
Sbjct: 533 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 592
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM+++ C PN+V+ NTL+ GF+ R F+ + +++ G + ++ I + GLC+
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSC 652
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
R+ A + D RGVLP + LV + G
Sbjct: 653 HRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEGVN 281
P+ V + I + +N D AL +F+ M E GC P + S+N+L+ K+DE +
Sbjct: 77 PEDVALTV-IKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+G + T IL+ C + + KA EL+ +G P F Y L+ L
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EGILPDS 400
G AL++ DE+ ++G P V LI+G + + AS + E++LK + P+
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255
Query: 401 VTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
++N ++ LC G+ ++ + R+ + +G D TY L+ G +
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERG--QDLYTYSTLIHGLCGSGNLDGATRVY 313
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNA 483
EM + G PD+ YN+ ++G A
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRA 338
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 151/295 (51%), Gaps = 4/295 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ N+LIN F + + D + ++ ++P +VTF LI+G + KF A+ L
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
F +M +GC P+ ++ T+I G GE G + +M E GC+ + VT L+ L
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAG--LFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C RV +A ++ + + P F Y L++ LC A +++E+ +P+V
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ L++ + K + A G+++ M + G+ PD VT+N L+ V+A +L +
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG PD +Y IL++GY + R E + L NEM+ +G P+ +YN+ + GL
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 161/322 (50%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F + R++ L F + K I +P++ + LING K +F +A+ +D MV
Sbjct: 17 INCFCQLQRVD---LGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVA 73
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+PD T+ +I+G C+ + LA GLF++M E GC NVV+++TLI R+ +E
Sbjct: 74 RGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNE 133
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+++ M + T L+ GLCN R +A L+ + + ++P + LV+
Sbjct: 134 ALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVD 193
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EG A V+ + + G P V+ +L+ G + VEA L + M+ +G P
Sbjct: 194 TFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKP 253
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D +++ L+ C R +A +L +G P+ ++Y+ L+ G + R +E ++L
Sbjct: 254 DVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLF 313
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
M G +P+L TY +DG
Sbjct: 314 KNMHTNGNLPNLYTYAILLDGF 335
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 132/265 (49%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+ T NILI+ FC+ ++ DL + + + G P +V+F TLI G KF + V
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M+ GC+ T +++GLC G A L G Y L+ L
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C AL++ + K P++ T+LI+GL + EAS L+ +M I+P+
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VTFN L++ C G+ + A+ + + G++PD +TY+ L+ GY+ E L +
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ +Y+ ++G A++
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKR 270
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 1/328 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K R+N+ L F M K D P++ Y LI G + +A + M
Sbjct: 122 IHSLCKYRRVNEALDIFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+VVTFN+L+ FC+ K A G+ + M E G P+VV++N+L+ G+ + E
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI GC+ + IL++G C R+ +A +L + +G P + Y L+ L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A ++ + GNLP++ L++G + +A L M + P+
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V +N L+ +C G DA L GL P+ Y +++G +E E
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVR 488
M D+G PD +YN + G + R
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESR 448
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 135/285 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +NVL++ F K + A G M V+PDVVT+N L+ G+ + A L
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KGC P+V S++ LI G+ ++ DE + EMI G ++V+ L+ GLC
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A +L + G LP + Y L++ C +G G A + + P+++
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ + + +A L ++ G+ P+ + ++ LC G +A
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G PD +Y++++ G+ + +L+ EM D GFI D T
Sbjct: 423 DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 135/292 (46%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V Y+ LI+ K R ++AL + M + P + T+ LI G C ++ A L
Sbjct: 114 NVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALL 173
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM PNVV+FN L+ F E K + M E+G E VT L+ G
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
V++A +L +G P F Y L+ C A ++ +E+ +G+ P+ ++
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TLI GL +L + EA L + M G LP+ T+ LL+ C G A RL +
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L P+ + Y+ILV+ + K+ L +E+ G P++ Y + ++GL
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGL 405
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M G +PN + N LI F ++ D G ++ + I+LG + + VT L++GL G+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+A EL D RG P D+ Y ++ LC G +A + ++ + G +V+ +T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI L + R+ EA + M + I P T+ L++ LC+ R +A L ++
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ P+ +T+++LV + +E + E ++ M + G PD+ TYNS M G S
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYS 231
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ F K + F AM+ +P++ +YN+L+N K A + +
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYL-KPNLVMYNILVNAMCKSGNLKDARELFSEL 386
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++P+V + +I+G C+ D AL FR M + GC P+ S+N +IRGF +
Sbjct: 387 FVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDE 446
Query: 277 DEGVNMAYEMIELG 290
V++ EM + G
Sbjct: 447 SRAVHLIGEMRDRG 460
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 156/332 (46%), Gaps = 34/332 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN ++NG+ K ++A + ++V + PD T+ LI G+C+ K D A +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KGC N V++ LI G R+ DE +++ +M + C + T +L+ LC
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R +A LV + G+ P Y L++ LC + A E++ ++ +KG +P+VI
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 368 CTTLIEGL----------------------------RRLRKGV------EASGLMEKMLK 393
LI G L KG +A G++ KML+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+LPD VT+N L++ C G A RL L + +GL PD TY ++ + R +E
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L + + +G P++ Y + +DG A K
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
FE KLI G YN L+N + D+ Y M+ D+V P++ T+N +++G+C
Sbjct: 175 FELKYKLIIG-----CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + A ++ E G +P+ ++ +LI G+ + D + EM GC + V
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
L+ GLC R+ +A +L + P Y L++ LCG AL +V E+
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ G P++ T LI+ L K +A L+ +ML++G++P+ +T+N L+ C G
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
DA + L ++ L P+ TY+ L+ GY + N K ++N+ML+ +PD+ TYNS
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSL 468
Query: 477 MDG 479
+DG
Sbjct: 469 IDG 471
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + K + D + E M RKL P+ YN LI G+ K KA+G +
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKL---SPNTRTYNELIKGYCK-SNVHKAMGVLN 451
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ +V PDVVT+N LI G CR+ FD A L M ++G P+ ++ ++I +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E ++ + + G + V L+DG C G+V +A ++ + LP +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC +G A + +++ K G P+V T LI L + A ++ML
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD+ T+ ++ C GR +DA+ + G+ PD TY L+ GY +
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ M D G P T+ S + L
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 20/349 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K+ R+ + F+++ + P+V +Y LI+G+ K + D+A ++M+
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ +TFN LI G C + K A L +M + G P V + LI + FD
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M+ G + + T + C EGR+L A +++ GV P F Y L++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-------------- 386
G A +V+ + G PS +LI+ L ++ G +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 387 ----LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHIL 441
L+EKM++ + P++ ++ L+ +C+VG A+++ + +G+ P + ++ L
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+S + + E +V++M+ G +P L + + GL + R T
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 143/343 (41%), Gaps = 57/343 (16%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ ++ + L E M K I +P+VS +LI+ +K +FD A + +M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVK-IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF------ 270
+ KPD T+ I +CR + A + +MRE G +P++ ++++LI+G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 271 ---------------------------------FGERK--------------FDEGVNMA 283
+G++K FD V +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR--GVLPKDFDYFGLVEKLC 341
+M+E ++ + E L+ G+C G L+ E V D +R G+ P + + L+ C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGN-LRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A +VVD++ G+LP + +C LI GL + + + + + +L+ G D +
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ +++ + G L + G TY +L+ G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 86/223 (38%), Gaps = 35/223 (15%)
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ DE + EM+E + T +V+G C G V +A + V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G+ P F Y L+ C + A +V +E+ KG + +A T LI GL R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA L KM + P T+ L++ LC
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCG------------------------------ 335
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R+ E NLV EM + G P++ TY +D L + K
Sbjct: 336 -----SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 186/398 (46%), Gaps = 6/398 (1%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-DGIFS-- 149
F F W+ T + F+H ++ + L + + + +SVL + + C D ++S
Sbjct: 126 FKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTR 185
Query: 150 --CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C +F + + + + + F M++ P N L++ F K + D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRF-RVFPKTRSCNGLLHRFAKLGKTD 244
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
F+ M+ +P V T+NI+I C+ + A GLF EM+ +G P+ V++N++I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF + D+ V EM ++ CE +T L++ C G++ E + G+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y LV+ C EG A++ ++ + G +P+ T+LI+ ++ +A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ML+ G+ + VT+ L++ LCD R +A+ L T G+ P+ +Y+ L+ G+ +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+NE+ G PDL Y +++ GL + K
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 41/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K R++D + FE M+ + P V YN LIN F K + L FY M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +KP+VV+++ L+ FC+ A+ + +MR G PN ++ +LI
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+++G E++ VT L+DGLC+ R+ +A EL GV+P Y L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N ALE+++EL +G P ++ T I GL L K A +M +M + GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 397 LPDS-----------------------------------VTFNCLLEDLCD---VGRTVD 418
+S VTF L++ LC V + V
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV- 597
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
D +++ GL + + ++ G ++N+ + L +M+ +G +PD Y S MD
Sbjct: 598 -DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 479 G 479
G
Sbjct: 657 G 657
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 139/282 (49%), Gaps = 34/282 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ YN LI+GFVK + D+AL + + +KPD++ + I G C +K + A +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E G N + + TL+ +F EG+++ EM EL E + VT +L+DGLC
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V KA +D+ R + DF GL + NA I
Sbjct: 590 NKLVSKA----VDYFNR--ISNDF---GL------QANAAIF------------------ 616
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I+GL + + A+ L E+M+++G++PD + L++ G ++A LR +
Sbjct: 617 -TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G+ D + Y LV G + N+ ++ + + EM+ EG PD
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++A+ K+ +GL + M++L D +V + VLI+G K + KA+ +++R
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKEL-DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 216 MVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ D ++ + F +I G C++ + + A LF +M +KG P+ ++ +L+ G F +
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + + +M E+G + + LV GL + ++ KA + + G+ P +
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+++K G A+E+ L K L S
Sbjct: 723 SVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 65/146 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ + +I+ +I+G K + + A +++MV+ + PD + L+ G + AL
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E G +++++ +L+ G + + + EMI G V C ++
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFD 332
G + +A EL + +L D D
Sbjct: 730 ELGCIDEAVELQSYLMKHQLLTSDND 755
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYD--RMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P+ + YNVL VK D A+ D R+ R+ KPD ++N +I G CR + A
Sbjct: 171 PTTATYNVL----VKAHCSDAAVPIDDAVRVFRNIPKPDACSYNTVIDGLCRRGRLPEAR 226
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF EM G P VV++ TLI E FD+ + + EM G + VT L+DGL
Sbjct: 227 DLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGL 286
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR A EL+ + LP Y +++ LC EG G A+E++D + +G P
Sbjct: 287 CKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDA 346
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVD 418
LI GL + +EAS +++M GI P+ +T+ + ++ LC G V
Sbjct: 347 GLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVR 406
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ T+G+ T+H+LV +++N ++ ++V +ML E IP+ T+++ +
Sbjct: 407 AFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVR 466
Query: 479 GLSNARK 485
+ +K
Sbjct: 467 AYWSKKK 473
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 47/269 (17%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK--FDEGVNMAY 284
++ +++ + LA L +MR G P ++N L++ + D+ V +
Sbjct: 140 SYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFR 199
Query: 285 EMIEL-GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+ + C +++V +DGLC RRG LP+ D F
Sbjct: 200 NIPKPDACSYNTV-----IDGLC----------------RRGRLPEARDLFA-------- 230
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
E+ G P+V+ TTLI L R +A L ++M + GI+P+ VT+
Sbjct: 231 -----------EMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTY 279
Query: 404 NCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ L++ LC GR A L R++ K P+ +TY ++ G +E + +++ M
Sbjct: 280 SSLIDGLCKGGRAASAVELLDRMVKERK--LPNTITYSSVIDGLCKEGCLGQAMEILDRM 337
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+G PD + + GL +A +++ +
Sbjct: 338 RLQGRKPDAGLFGKLIVGLCDAGRALEAS 366
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 180/393 (45%), Gaps = 9/393 (2%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCP 151
+F WA + FR F I+ LA + + V+ I+AN + I C
Sbjct: 99 LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCV 158
Query: 152 EME---RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREF 206
E +I + + K + + L F+ K+I R P V N ++
Sbjct: 159 SSEVSVKILDLLIWVYSKKSMVEQCLSVFD---KMIKSRLSPDVKNCNRILRILRDKDLM 215
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ Y M +KP +VT+N L+ +C+ K L L EM+ +GC PN V++N L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G + +F++ + EM++ G + S+ T L+ G N+G + +A L + +G
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y + LC G A++ + ++ LP V++ TLI G RL ++A
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L +++ + P VT+N LL+ LC G A +L++ +G+ PD +TY ILV+G
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 455
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + +EML EG D Y + + G
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 488
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 157/358 (43%), Gaps = 36/358 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++++ K ++ GL M++ P+ YNVLING K EF++A G M
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRR-GCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +K T+N LI G+ AL L EM KG +P V ++N+ I G +
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 277 DEGVNMAYEMI--------------------------------ELGCEF---SSVTCEIL 301
+ + +M+ EL + + VT L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGLC +G + A +L ++ G+ P Y LV C G+ +A E DE+ +G
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
A T I G +L A L E+ML +G PD + +N +++ LC +G +A
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L + G+ PD +TY ++ + R ++G + EML +G P + TY + G
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 3/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + + + L F+ +R I P++ YN L++G + E + A M
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRS-IYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + + PD+VT+ IL++G C+ +A F EM +G + ++ T I G
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ EM+ G + ++VDGLC G + +A EL+ GV+P Y +
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G E+ E+ KG PSV+ T LI G + A +M ++GI
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LP+ +T+N L+ LC V R A KG+ P+ +Y IL++ +E +
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK--SVRQ 489
L +MLD G PD T+++ + L K +VRQ
Sbjct: 676 LYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQ 710
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 18/318 (5%)
Query: 125 FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
F EL S+ F + DG+ E+E V +K +N+G+
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELE------VAQQLKVEMINEGI---------- 440
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
P + Y +L+NG K A F+D M+ + ++ D + I G + A
Sbjct: 441 --APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L EM KG P+++ +N ++ G +E + +M+ G VT ++
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
GR+ K E+ + +G+ P Y L+ G+G A E+ +KG LP+
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
VI +LI GL ++R+ +A +M+++GI P+ ++ L+ + C++G +A L
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678
Query: 425 LASTKGLDPDGMTYHILV 442
+G+ PD T+ L+
Sbjct: 679 QMLDRGVQPDSCTHSALL 696
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L V D++ K P V C ++ LR +A + M + GI P VT+N LL+
Sbjct: 184 LSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS 243
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G+ L +G P+ +TY++L++G +++ ++ + L+ EML G
Sbjct: 244 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS 303
Query: 470 LATYNSYMDGLSN 482
TYN + G N
Sbjct: 304 AYTYNPLIYGYFN 316
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 42/333 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFY-----DRMVRDRVKPDVVTFNILISGFCRNKKFD 242
PSV+ YN LI+G+ C++ ++ MV + P VTF +LI+G+C+N
Sbjct: 224 PSVATYNSLIDGY--CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ +F EM+++G +VV++N+LI G E K +EGV + EM +LG + +T ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C +G + A + + + R V P Y L++ G A+ V + + KKG
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V LI G R ASGL+++M ++GI D VT+N L+ LC G A +L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 423 RLLASTKGLDPDGMTYHILVSGY-------------TR-ENRRK---------------- 452
S GL+P+ +TY+ ++ G+ TR E RK
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 453 -----EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E +L+NEMLD+ +P+ TY + +G+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 153/334 (45%), Gaps = 38/334 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR----NKKFD 242
RPS S N L+ G V + D A + +R RV PD+ TFN +ISG CR K D
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 243 LALG----------------------------------LFREMREKGCNPNVVSFNTLIR 268
+A L +EM E G +P V+F LI
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ V + EM + G S VT L+ GLC+EG+V + +L+ + G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ + +++ C +G A + +D + ++ P V+ T LI+G RRL K +A +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E M K+GI P+ T+NCL+ G A L KG++ D +TY++L+ +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
++ L++EM + G P+ TYN+ + G +
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++ +G+ E M L P+ + ++ GF K A + D M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDL-GLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDVV + ILI G+ R K + A+ + M +KG +PNV ++N LI GF +
Sbjct: 361 TERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM E G E VT +L+ LC +G V KA +L+ + S G+ P Y +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +GN A E+ + K +V+ I+ ++ K EA+ L+ +ML + +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540
Query: 397 LPDSVTFNCLLEDLCDVGRTVD 418
+P+ +T+ + E + + G T D
Sbjct: 541 VPNGITYETIKEGMMEKGYTPD 562
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F +
Sbjct: 5 TNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
++ F+ + A++++ ++D L F R+ P + VL F+K + F GF
Sbjct: 65 DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVL-EHFMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ + LA +F E+ + G P+VVSFNTL+ G+
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A EL + G++P
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G+ +A+E E+ ++G P +I TLI GL + +A L+++M
Sbjct: 244 FTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D + Y L+SG RE +
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G PD TY
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYT 385
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 1/288 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K E A +D + + ++P VV+FN L++G+ R D
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K ++ + EMI G + VT L+DG
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDG 250
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G + A E + R+G P Y L+ LC +G+ A +++DE+ KG P
Sbjct: 251 HCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M+KE I D V + L+ LC G++VDA+++
Sbjct: 311 KITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLR 370
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ GL PD TY ++++ + ++ K G L+ EM +G +P + T
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K M F+ + K RPSV +N L+NG+++
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKW-GLRPSVVSFNTLMNGYIRLG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ M V+PDV T+++LI+G C+ K + A LF EM G PN V+F
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G D + EM+ G +T L+ GLC +G + +A +L+ + S +
Sbjct: 246 TLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ AL + K+ +A T LI GL R + V+A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDA 365
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
++ +ML G+ PD+ T+ ++ + C G +L
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKL 403
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++MND F M + +G P+ + LI+G K D A+ Y
Sbjct: 209 YSVLINGLCKESKMNDANELFGEM--IGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKE 266
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 267 MLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + MI+ V L+ GLC EG+ + A +++ + G+ P + Y
Sbjct: 327 LETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTM 386
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C +G+ +++ E+ + G++P V+
Sbjct: 387 IINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
EG RL A + +++ K G+ P V+FN L+ +G + RL+ G+
Sbjct: 149 EGEMRL-----AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ 203
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
PD TY +L++G +E++ + L EM+ G +P+ T+ + +DG
Sbjct: 204 PDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDG 250
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 11/372 (2%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ + ++ ++ L + R +E + ++ + C CP + R + + A
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNC---------CPTV-RTYTVLIYALS 310
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ R + L F M++ P+V Y VLI+G K + D+A M + P V
Sbjct: 311 GSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N LI G+C+ D A + M C PN ++N LI G +RK + + + +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+E S +T L+ G C + A L+ + G++P + Y ++ LC EG
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A + D + KG + + T LI+G ++ K A L+E+ML + LP+S T+N
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L+E LC + +A L T G+ P +TY IL+ ++ + N M+ G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 466 FIPDLATYNSYM 477
+ PD+ TY +++
Sbjct: 610 YQPDVCTYTAFL 621
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R VS Y LI+G + ++AL + M D P V T+ +LI + + AL
Sbjct: 262 RNEVS-YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM+EKGC PNV ++ LI G E K DE M EM E G S VT L+DG C
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG + A E++ P Y L+ LC + A+ +++++ ++ PS+I
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI G ++ A L+ M + G++PD T++ ++ LC GR +A L
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ + + Y L+ GY + + +L+ ML++ +P+ TYN ++GL +K
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N ++NG+ K +A + ++V+ + PD T+ LI G CRNK D A +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251
Query: 248 FREMREKGCNPNVVSFNTLIRGF------------FGERKFD------------------ 277
F M +KGC N VS+ LI G F + D
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311
Query: 278 -----EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E +N+ EM E GCE + T +L+DGLC E ++ +A +++ + S +G++P
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ C EG A E++D + P+ LI GL + RK +A L+ KML
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ + P +T+N L+ C V A RL L + GL PD TY + + +E R +
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L + + +G + Y + +DG K
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 170 MNDGLLAFEAMRKL-IDG----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ D L E RK+ DG +P++ YN ++ K D+ Y ++ +++ P+
Sbjct: 134 IEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPN 193
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ TFN +++G+C+ A ++ + G +P+ ++ +LI G + D +
Sbjct: 194 IYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M + GC+ + V+ L+ GLC GR+ +A +L D + P Y L+ L G G
Sbjct: 254 IMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSG 313
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + +E+ +KG P+V T LI+GL + K EA ++ +M ++G++P VT+N
Sbjct: 314 RKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYN 373
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G DA + L + P+ TY+ L+ G ++ + + L+N+ML+
Sbjct: 374 ALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Query: 465 GFIPDLATYNSYMDG 479
P L TYNS + G
Sbjct: 434 KLSPSLITYNSLIHG 448
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 182/418 (43%), Gaps = 51/418 (12%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ +L+ S R E ++ N + C P + + ++ K N+M
Sbjct: 301 TYTVLIYALSGSGRKVEALNLFNEMKEKGCE---------PNV-HTYTVLIDGLCKENKM 350
Query: 171 NDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
++ +L+ + + LI PSV YN LI+G+ K D A D M + P+ T+
Sbjct: 351 DEARKMLSEMSEKGLI---PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N LI G C+ +K A+ L +M E+ +P+++++N+LI G + + M E
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G T + +D LC EGRV +A L +GV + Y L++ C G +
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL- 407
A +++ + LP+ LIEGL + +K EAS L+ KML G+ P VT+ L+
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587
Query: 408 ------------------------EDLCDV----------GRTVDADRLRLLASTKGLDP 433
D+C G + D + + +G+ P
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
D +TY +L+ GY R + + M+D G P L + + LS+ + +++TR
Sbjct: 648 DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR-MKETR 704
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 33/393 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ + +L R E ++ + + A + E I+ ++ + K
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKAN----------EVIYTALIDGYCKV 522
Query: 168 NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+++ +A+ + ++++ P+ YNVLI G K ++ +A +M+ VKP V
Sbjct: 523 GKID---VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+ ILI ++ FD AL +F M G P+V ++ + +F + +E ++ +
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M E G VT +L+DG G +A + + G P + L++ L E
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699
Query: 346 AG------------------IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
IAL++ +++ + G V LI G + + EA GL
Sbjct: 700 MKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL 759
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M + G+ P +N LL+ C +G +A RL GL P +Y +LV G
Sbjct: 760 VHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYI 819
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
E ++ + + + +L G+ D + +DGL
Sbjct: 820 EGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 852
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 18/309 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y+V I+ K ++A +D + VK + V + LI G+C+ K D+A L
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSL 531
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M C PN ++N LI G E+K E ++ +M+ +G + + VT IL+ +
Sbjct: 532 LERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLK 591
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ G P Y + +G +V+ ++ ++G LP ++
Sbjct: 592 DGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL----------CDVGRTV 417
T LI+G RL A ++ M+ G P + L+++L ++G
Sbjct: 652 YTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDS 711
Query: 418 DADRLRLLASTK--------GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
++ L + K G D Y L++G+ ++ R +E + LV+ M + G P
Sbjct: 712 VSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 771
Query: 470 LATYNSYMD 478
YNS +D
Sbjct: 772 EDIYNSLLD 780
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 19/309 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +K + L F M L +P V Y ++ + ++ +M
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSL-GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PD+VT+ +LI G+ R A + M + GC P++ + LI+ E +
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Query: 277 DE-----GVN-----MAYE--------MIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
E G++ + YE M+E GC L+ G C + R+ +A LV
Sbjct: 701 KETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 760
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
RG+ P + Y L++ C G A+ +VD + + G LP + + L+ GL
Sbjct: 761 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIE 820
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+A + +L G D V + L++ L + L + KG P+ +TY
Sbjct: 821 GSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTY 880
Query: 439 HILVSGYTR 447
+L+ G R
Sbjct: 881 SLLIEGLER 889
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 171/373 (45%), Gaps = 41/373 (10%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F NR+ AF + K++ +P + + LI G +
Sbjct: 98 FGIPPDVYTLNILINSFCHLNRLG---FAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
AL +D+M+ + +P+VVT+ LI+G C+ + A+ L R M + C P+VV + +
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ +M+ G CE+ VT
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG++ +A ++V RGV P Y L++ C + A+
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V D + G P+VI+ TLI G ++++ +A+ L E+M ++ ++P++VT+N L+
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-X 393
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VGR DA L G PD TY IL+ +++ E L+ + PD+
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 453
Query: 471 ATYNSYMDGLSNA 483
Y +DG+ A
Sbjct: 454 QIYTIVIDGMCRA 466
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 159/323 (49%), Gaps = 1/323 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F M + PS +N L+ K +++ ++M + PDV T
Sbjct: 48 NTLDDALSSFNRMLHM-HPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT 106
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC + A + ++ + G P+ +F TLIRG E K + +++ +MI
Sbjct: 107 LNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + + VT L++GLC G A L+ + P Y +++ LC +
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 226
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + ++ +G P + T+LI L L + + L+ +M+ I+PD V F+ ++
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ +A + + +G++P+ +TY+ L+ G+ ++ E + + M+ G+
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346
Query: 468 PDLATYNSYMDGLSNARKSVRQT 490
P++ +YN+ ++G ++ + T
Sbjct: 347 PNVISYNTLINGYCKIQRMDKAT 369
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 154/314 (49%), Gaps = 5/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
+ ++I+ + P V I++ +++ K + +A D M+ V+P+VVT+N L+ G C
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A+ +F M G PNV+S+NTLI G+ ++ D+ + EM + ++VT
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ C+ GR+ A L + G +P Y L++ LC + + A+ ++ +
Sbjct: 387 YNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
P + T +I+G+ R + A + + +G+ P+ T+ ++ LC G
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A++L + G PDG TY+ + G + L+ EML GF D++T +
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565
Query: 478 DGLSNAR--KSVRQ 489
+ L + + +SV+Q
Sbjct: 566 EMLCDDKLDQSVKQ 579
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 179 AMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
A+ K I+G P + IY ++I+G + E + A + + ++P+V T+ I+I+G
Sbjct: 439 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
CR D A LF EM GC+P+ ++NT+ +G ++ + + EM+ G
Sbjct: 499 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADV 558
Query: 296 VTCEILVDGLCNE 308
T +LV+ LC++
Sbjct: 559 STTTLLVEMLCDD 571
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R+ D + F M + G+ P ++ Y +L++ K D+A+ + + PD+
Sbjct: 398 RLQDAIALFHEM--VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 455
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ I+I G CR + + A +F + KG PNV ++ +I G DE + EM
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
GC T + GL L+A +L+ + RG LVE LC +
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 167/373 (44%), Gaps = 42/373 (11%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
G ++C ++ ++A K R+ D LL R L+ P+ + YN+L+ G+ K
Sbjct: 235 GKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLL---PNRNTYNILVYGYCKM 291
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+A + M ++ + PDV T+N+LI+G C + + A L EM P+VVS+
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NTLI G K E + EM E G + ++VT I+V C EG++ A +
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G P Y L+ C GN G A +DE+ +K + T++ L R +K E
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEE 471
Query: 384 ASGLMEKMLKEG-----------------------------------ILPDSVTFNCLLE 408
A L+ K G I+P +VT+NC++
Sbjct: 472 AYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIG 531
Query: 409 DLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G+T A +L L + GL PD TY+ ++ GY RE ++ N+M++ F
Sbjct: 532 GLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 468 PDLATYNSYMDGL 480
PD+ T N + GL
Sbjct: 591 PDVFTCNILLRGL 603
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 201/427 (47%), Gaps = 14/427 (3%)
Query: 68 QITPSSLLHFLKSK-LHHHPQFTHYDFHIFAWAST-IDSFRHDHTTFLFIVRSLASSYR- 124
Q+TP +L L SK L P F WA T + +F H+ L + S+R
Sbjct: 47 QLTPPLVLSILSSKTLISRPNIL---ISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRK 103
Query: 125 FSELHSVL-NFISANPCPCSNDGIFSCPEMER-IFHFAVNAFVKANRMNDGLLAFEAMRK 182
FS+ S+L FI+ + + I + + A+ A+V++ + + F+ M++
Sbjct: 104 FSDAKSLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGFCRN 238
L RP++ N L+N V+ ++ F D +K P+V TFNI+I G+C
Sbjct: 164 L-RLRPNLLTCNTLLNSLVRYPS-SHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLE 221
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
KF A+ M + C+P+ V++NT++ + + + ++ +M G + T
Sbjct: 222 NKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTY 281
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
ILV G C G + +A ++ ++ +LP + Y L+ LC EG A ++ DE+
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
LP V++ TLI G K EA L+E+M ++G+ P++VT N +++ C G+ D
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A G PD +TY+ L++GY + E ++EM + D T N+ +
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 479 GLSNARK 485
L +K
Sbjct: 462 TLCREKK 468
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N R+ + + M L P V YN LING ++ + +A + M
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VKP+ VT NI++ +C+ K D A +M E G +P+ V++NTLI G+
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E EM + SVT ++ LC E ++ +A +L+ +RG + Y L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +GN AL++ DE+ +K +PS + +I GL + K +A + ++L+ G+
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD T+N +L C G A + PD T +IL+ G E ++
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L N + +G D TYN+ + L
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSL 638
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 50/354 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N ++ +++++ E M + +P+ +N+++ + K + D A +M
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 217 VRDRVKPDVVTFNILISGF-----------------------------------CRNKKF 241
PD VT+N LI+G+ CR KK
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ A L R++G + VS+ TLI G+F + D + + EM E S+VT +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GLC G+ +A + + G+LP + Y ++ C EG+ A + +++ +
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-------EGILPDSVTFNCLLEDLCDVG 414
P V C L+ GL G++EK LK +G D+VT+N L+ LC G
Sbjct: 590 KPDVFTCNILLRGLC-------MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
R DA L K L PD TY+ +++ T R +E E +++ML++G +P
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 1/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + + N+ D + M K + P YN +++ K A M
Sbjct: 211 FNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPDNVTYNTILDALCKKGRLGDARDLLMDM 269
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ T+NIL+ G+C+ A + M + P+V ++N LI G E +
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRI 329
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM L V+ L++G ++ +A +L+ + S +GV P + +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ C EG A + ++ + G P + TLI G + EA M++M ++ +
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
DSVT N +L LC + +A +L A +G D ++Y L+ GY ++
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L +EM ++ IP TYN + GL K+
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 12/297 (4%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI G+ K D+AL +D M + P VT+N +I G C+ K + A+ E+
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G P+ ++NT++ G+ E ++ +M+E + TC IL+ GLC EG +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA +L + +G Y L+ LC EG A ++ E+ +K P +I
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + EA M KML++G LP V D TV + + +
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGXLPXQVL-------QLDXNETVVTSETSEESDSSSV- 722
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
Y + E + K+ + E +G D +TY + MDGL RKS+ +
Sbjct: 723 ----AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISK 775
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 194/418 (46%), Gaps = 42/418 (10%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH ++ ++ L + SE ++ + + S +F+ + IF
Sbjct: 10 TFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIF 69
Query: 158 HFA--VNAFVKANRMNDGL------------LAFEAMRKLID------------------ 185
F+ + A++++ + D + + F+ RK+++
Sbjct: 70 VFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXI 129
Query: 186 ---GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R
Sbjct: 130 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 189
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D L M G P+V +++ LI G E K D+ + EM+ G + VT L
Sbjct: 190 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 249
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DG C GRV A E+ + +LP Y L+ LC +G+ A ++DE+ KG
Sbjct: 250 IDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGL 309
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P I TTLI+G + A ++M++E I D V + L+ LC GR+VDA++
Sbjct: 310 KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEK 369
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + GL P+ TY ++++ + ++ +G L+ EM +G +P + TYN M+G
Sbjct: 370 MLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C +G+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 135 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 194
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ML G+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+
Sbjct: 195 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 254
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + ML + +PDL TYN+ + GL
Sbjct: 255 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 288
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G + +L+ G FN L+ C G A +
Sbjct: 105 TCRKVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 164
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 165 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 223
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 188/390 (48%), Gaps = 14/390 (3%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
+F A + SF+ +T ++ + A+ F+ + +L+ I N I +
Sbjct: 62 QMFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLE-----NRVI-----I 111
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
ER F A+ KA+ + F M + SV +N ++N + + + L FY
Sbjct: 112 ERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 214 DRMVRDR----VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
D +V + P+ ++FN++I C+ D A+ +FR M EK C P+ ++ TL+ G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDG 231
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E + DE V + EM GC S V +L+DGLC +G + + +LV + +G P
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPN 291
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ Y L+ LC +G A+ +++ + +P+ + TLI GL + R+ ++ + L+
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI 351
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M + G + ++ L+ L G+ +A L + KG P+ + Y ++ G RE
Sbjct: 352 SMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ E + ++N M+ G +P++ TY+S M G
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKG 441
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 170/389 (43%), Gaps = 49/389 (12%)
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGF 200
C DG C M+ K R+++ +L + M+ +G PS IYNVLI+G
Sbjct: 218 CLPDGYTYCTLMD--------GLCKEERIDEAVLLLDEMQS--EGCSPSPVIYNVLIDGL 267
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K + + D M P+ VT+N LI G C K D A+ L M C PN
Sbjct: 268 CKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++ TLI G +R+ +G + M E G + +L+ GL EG+ +A L
Sbjct: 328 VTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKK 387
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV--------------- 365
+ +G P Y +++ LC EG A E+++ + G LP+V
Sbjct: 388 MAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGL 447
Query: 366 -------------IAC-------TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
C + LI+GL + + EA + KML GI PD+V ++
Sbjct: 448 SEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 406 LLEDLCDVGRTVDADRL---RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+++ LC +G A +L L PD +TY+IL+ G + +L+N ML
Sbjct: 508 MIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCML 567
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
D G PD+ T N++++ LS S + R
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSDSCEEGR 596
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + A K ++ + F M +K + P Y L++G K D+A+ D
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCL---PDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P V +N+LI G C+ L M KGC PN V++NTLI G +
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKG 306
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ V++ M+ C + VT L++GL + R + L+I RG Y
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYS 366
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A A+ + ++ +KG P+++ + +I+GL R K EA ++ M+
Sbjct: 367 VLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISS 426
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LP+ T++ L++ G + +A ++ G + Y +L+ G R KE
Sbjct: 427 GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEA 486
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ML G PD Y+S + GL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSMIKGL 512
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 21/212 (9%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C E + ++ R+ + ++ + M I +P Y+ +I G D A
Sbjct: 463 CSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLT-IGIKPDTVAYSSMIKGLCGIGSMDAA 521
Query: 210 LGFYDRMV---RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
L Y M+ + +PDVVT+NIL+ G C K A+ L M ++GC+P+V++ NT
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTF 581
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ K D CE E LV L RV AC++V + +
Sbjct: 582 LNTL--SEKSD------------SCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYL 627
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
PK + +V ++C A +++ W+
Sbjct: 628 APKTSTWAMIVPEICKPKKINAA---INKCWR 656
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P+ ++FN +++ LC +G A + K PDG TY L+ G +E R E
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L++EM EG P YN +DGL R T+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTK 278
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
+P+V YN++I+ K + + A G ++ M + PD VT+N +I GF + + D +
Sbjct: 91 AKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTV 150
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
F EM++ C P+V+++N LI F K +G+ EM G + + V+ LVD
Sbjct: 151 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAF 210
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C EG + +A + +D R G++P ++ Y L++ C GN A + +E+ + G +V
Sbjct: 211 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNV 270
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRL 424
+ T LI+GL E L+++M++ I VTF L++ LC A D
Sbjct: 271 VTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGR 330
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+++ GL + Y ++ G + N+ + L +M +G +PD Y S MDG
Sbjct: 331 ISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDG 385
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 40/333 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K R++D + FE M+ + P V YN LIN F K + K L F+ M
Sbjct: 133 YNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPKGLEFFREM 191
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ +KP+VV+++ L+ FC+ A+ + +MR G PN ++ +LI +
Sbjct: 192 KRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNL 251
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLC-----NEG--------------RVLKACEL 317
+ +A EM+++G E++ VT L+DGLC EG V+ C L
Sbjct: 252 SDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVL 311
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCG-EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+ + ++ K DYFG + G + NA I T +I+GL
Sbjct: 312 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIY-------------------TAMIDGLC 352
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + A+ L E+M ++G++PD + L++ G ++A LR G+ D +
Sbjct: 353 KGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLL 412
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
Y LV G + N+ ++ + + EM+ EG PD
Sbjct: 413 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 172 DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNI 230
+GL + M +L D + +V + VLI+G K + KA+ ++ R+ D ++ + +
Sbjct: 288 EGLHLLDEMVEL-DIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTA 346
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+I G C+ + + A LF +M +KG P+ ++ +L+ G F + E + + +M+E G
Sbjct: 347 MIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETG 406
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ + LV GL + ++ KA + + G+ P + +++K G A+
Sbjct: 407 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAV 466
Query: 351 EVVDELWKKGNLPS 364
E+ L K L S
Sbjct: 467 ELQSYLMKHQLLTS 480
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Query: 172 DGLLAFEAMRKLID--GRPS--------VSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
DGL + + K ID GR S +IY +I+G K + + A +++M + +
Sbjct: 313 DGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGL 372
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PD + L+ G + AL L +M E G +++++ +L+ G + + +
Sbjct: 373 VPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARS 432
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
EMI G V C ++ G + +A EL + +L D D
Sbjct: 433 FLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLTSDND 483
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 169/321 (52%), Gaps = 7/321 (2%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDK--ALGFYDRMVRDRVKPD 224
+++D + F M K RP SI+ N L++ K ++FD +L +M++ +P
Sbjct: 22 KLDDAIGLFGGMVK---SRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+VT + L++G+C K+ A+ L +M E G P+ ++F TLI G F K E V +
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M++ GC+ + VT ++V+GLC G + A L+ + + +++ LC
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ AL + E+ KG P+V+ ++LI L + +AS L+ M+++ I P+ VTFN
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ G+ V+A++L + +DPD TY+ L++G+ +R + + + M+ +
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 465 GFIPDLATYNSYMDGLSNARK 485
PDL TYN+ + G +++
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKR 339
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
PS+ + L+NG+ + A+ D+MV +PD +TF LI G + K A+
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L M ++GC PN+V++ ++ G D N+ +M E V ++D LC
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V A L + +G+ P Y L+ LC G A +++ ++ +K P+++
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+ + K VEA L + M+K I PD T+N L+ C R A ++
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL------ 480
+K PD TY+ L+ G+ + R ++G L EM G + D TY + + GL
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375
Query: 481 SNARKSVRQ 489
NA+K +Q
Sbjct: 376 DNAQKVFKQ 384
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 86 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLA L +M +VV FNT+I R D+ +
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LC+ GR A +L+ D + + P + L++
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ D++ K+ P + +LI G + +A + E M+ + PD
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N L++ C R D L S +GL D +TY L+ G + + + +
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ TY+ +DGL N K
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGK 409
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI+ FVK +F +A +D M++ + PD+ T+N LI+GFC + + D A +
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P++ ++NTLI+GF ++ ++G + EM G +VT L+ GL +
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ GV P Y L++ LC G ALEV D + K +
Sbjct: 372 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 431
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+IEG+ + K + L + +G+ P+ VT+N ++ LC +A L
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD TY+ L+ + R+ + L+ EM F+ D +T + L + R
Sbjct: 492 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 548
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y V++NG K + D A ++M +++ DVV FN +I C+ + D AL
Sbjct: 146 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 205
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE + VT L+D
Sbjct: 206 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 265
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+ ++A +L D +R + P F Y L+ C A ++ + + K P +
Sbjct: 266 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 325
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ + + L +M G++ D+VT+ L++ L G +A ++
Sbjct: 326 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + + M D+ Y + ++G+ A K
Sbjct: 386 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ +++ K ++D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSYGRWSDASQLLS 243
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P++VTFN LI F + KF A L +M ++ +P++ ++N+LI GF
Sbjct: 244 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 303
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ C T L+ G C RV EL + S RG++ Y
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 363
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L +G+ A +V ++ G P ++ + L++GL K +A + + M K
Sbjct: 364 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D + ++E +C G+ D L S KG+ P+ +TY+ ++SG + +E
Sbjct: 424 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 483
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L+ +M ++G +PD TYN+
Sbjct: 484 YALLKKMKEDGPLPDSGTYNT 504
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY--EMIELGCEFS 294
++ K D A+GLF M + P++ FN L+ +KFD +++A +M++LG E S
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
VT L++G C+ R+ A LV G P + L+ L A A+ +VD
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ ++G P+++ ++ GL + A L+ KM I D V FN +++ LC
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
DA L TKG+ P+ +TY L+S R + L+++M+++ P+L T+N
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258
Query: 475 SYMDGLSNARKSVRQTR 491
+ +D K V +
Sbjct: 259 ALIDAFVKEGKFVEAEK 275
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + KA +++DG F ++ L +P+V YN +I+G R +A +
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M D PD T+N LI R+ + L REMR
Sbjct: 490 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 526
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 190/395 (48%), Gaps = 13/395 (3%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
IF + + S++ +F ++ S ASS F L VL+ + +F +E
Sbjct: 47 IFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMK------RERRVF----LE 96
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ F A+ KA+ + F M + +V +N ++N V+ F++AL FY+
Sbjct: 97 KNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYN 156
Query: 215 RMVRDR---VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+V + + P+ +TFN++I CR D A+ +FRE+ + C P+ +++TL+ G
Sbjct: 157 HVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLC 216
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + DE V++ EM G + V +L+ LC +G + +A +LV + +G +P +
Sbjct: 217 KEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y LV LC +G A+ +++++ +P+ + TLI G + + + ++ +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
G + ++ L+ LC G+ A L KG P+ + Y L+ G RE +
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E ++EM ++G++P+ TY+S M G A S
Sbjct: 397 DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDS 431
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 157/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A + ++ + F + L + P Y+ L++G K D+A+ D M
Sbjct: 173 FNLVIKAMCRLGLVDKAIEVFREI-PLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM 231
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P++V FN+LIS C+ A L M KGC PN V++N L+ G + K
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKL 291
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ V++ +M+ C + VT L++G +GR +++ RG ++ Y L
Sbjct: 292 EKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSL 351
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC EG A+E+ E+ KG P+ I + LI+GL R K EA G + +M +G
Sbjct: 352 ISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LP+S T++ L+ + G + A + + + + Y IL++G ++ + E
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALM 471
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +ML G D+ Y+S + G NA
Sbjct: 472 VWKQMLSRGIKLDVVAYSSMIHGFCNA 498
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 5/323 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K R+++ + + M+ ++G P++ +NVLI+ K + +A D M
Sbjct: 212 MHGLCKEERIDEAVSLLDEMQ--VEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLK 269
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P+ VT+N L+ G C K + A+ L +M C PN V+F TLI GF + + +G
Sbjct: 270 GCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDG 329
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + G + L+ GLC EG+ +A EL + +G P Y L++
Sbjct: 330 TRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDG 389
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC EG A + E+ KG LP+ ++L+ G +A + ++M + +
Sbjct: 390 LCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHN 449
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V ++ L+ LC G+ ++A + ++G+ D + Y ++ G+ N ++G L N
Sbjct: 450 EVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFN 509
Query: 460 EMLDEGFI--PDLATYNSYMDGL 480
+ML +G + PD+ TYN ++
Sbjct: 510 QMLCQGPVVQPDVITYNILLNAF 532
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
+C E + +N K + + L+ ++ M L G + V Y+ +I+GF +
Sbjct: 445 NCIHNEVCYSILINGLCKDGKFMEALMVWKQM--LSRGIKLDVVAYSSMIHGFCNANLVE 502
Query: 208 KALGFYDRMVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+ L +++M+ V+PDV+T+NIL++ FC K A+ + M ++GC+P+ ++ +
Sbjct: 503 QGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDI 562
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+ + E +N + G EF + LV L R + A +++ +
Sbjct: 563 FL------KTLRENMNPPQD----GREF----LDELVVRLVKRQRTIGASKIIEVMMHKF 608
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+LPK + +V+++C N A + E W +
Sbjct: 609 LLPKASTWAMVVQQVCKPKNVRKA---ISECWSR 639
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 158/292 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K ++FD + ++M R + ++ T+NILI+ FCR + LAL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G ++T L+ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +A +++++ V+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R +A L ++M +GI P+ VT++ L+ LC GR DA +L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L ++M+ PD+ TYNS ++G
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 7/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ +M E V ++D LC V A L + +G+ P Y L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++ ++ +K P+++ LI+ + K VEA L + M+K I
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+N L+ C R A ++ +K PD TY+ L+ G+ + R ++G
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL------SNARKSVRQ 489
L EM G + D TY + + GL NA+K +Q
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 87 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLA L +M +VV FNT+I R D+ +
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LC+ GR A +L+ D + + P + L++
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ D++ K+ P + +LI G + +A + E M+ + PD
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N L++ C R D L S +GL D +TY L+ G + + + +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ TY+ +DGL N K
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGK 410
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI+ FVK +F +A +D M++ + PD+ T+N LI+GFC + + D A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P++ ++NTLI+GF ++ ++G + EM G +VT L+ GL +
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ GV P Y L++ LC G ALEV D + K +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+IEG+ + K + L + +G+ P+ VT+N ++ LC +A L
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD TY+ L+ + R+ + L+ EM F+ D +T + L + R
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 549
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y V++NG K + D A ++M +++ DVV FN +I C+ + D AL
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE + VT L+D
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+ ++A +L D +R + P F Y L+ C A ++ + + K P +
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ + + L +M G++ D+VT+ L++ L G +A ++
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + + M D+ Y + ++G+ A K
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ +++ K ++D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P++VTFN LI F + KF A L +M ++ +P++ ++N+LI GF
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ C T L+ G C RV EL + S RG++ Y
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L +G+ A +V ++ G P ++ + L++GL K +A + + M K
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D + ++E +C G+ D L S KG+ P+ +TY+ ++SG + +E
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L+ +M ++G +PD TYN+
Sbjct: 485 YALLKKMKEDGPLPDSGTYNT 505
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + KA +++DG F ++ L +P+V YN +I+G R +A +
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M D PD T+N LI R+ + L REMR
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 182/385 (47%), Gaps = 11/385 (2%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F W+ +RHD + ++ L+ + + GI P+
Sbjct: 70 FFWSDRQWRYRHDPIVYCVMLDVLSKT-------KLCQGARRVLRLMVRRGIQRTPQ--- 119
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + ++ +A ++ + + M+K P++ + N I+ V +KAL F +R
Sbjct: 120 DFCCVMVSYSRAGKLRNAMQVLTMMQK-AGIEPNLLVCNTAIHVLVMANMLEKALRFLER 178
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VVT+N LI G+C + + A+ L EM KGC+P+ VS+ T++ R+
Sbjct: 179 MQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRR 238
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E +++ +M + VT L+ LC +A + + + +RG Y
Sbjct: 239 IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA 298
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+V+ C EG A E+V+E++ +G +P V+ T +I G + + +A ++++M K G
Sbjct: 299 IVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHG 358
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P++V++ L+ LC G + +A + + + P+ +TY +++ G+ RE + +
Sbjct: 359 CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
++V EM+ +GF P N + L
Sbjct: 419 DVVREMIGKGFFPTPVEINLLLQSL 443
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 156/356 (43%), Gaps = 36/356 (10%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV------------------ 201
A++ V AN + L E M +L+ P+V YN LI G+
Sbjct: 159 AIHVLVMANMLEKALRFLERM-QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLK 217
Query: 202 -----------------KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
K R + + ++M ++ D VT+N LI C+++ D A
Sbjct: 218 GCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEA 277
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L RE +++G + V ++ ++ + E + D+ + EM GC VT +++G
Sbjct: 278 LQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIING 337
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G V +A +++ + G P Y ++ LC +GN+ A E++ ++ P+
Sbjct: 338 FSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPN 397
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I + ++ G RR K +A ++ +M+ +G P V N LL+ LC +GR +A +
Sbjct: 398 AITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFME 457
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + + + ++ + +++ + +L+++M PD TY + +D L
Sbjct: 458 ECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDAL 513
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 42/363 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V+++ K RM+ M R I P V Y +INGF + E +A +M +
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRGCI---PDVVTYTAIINGFSQAGEVGQARKMLQQMYK 356
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
KP+ V++ + G C+ A + + E+ PN ++++ ++ GF E K +
Sbjct: 357 HGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSD 416
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EMI G + V +L+ LC GRV +A + + + G ++ ++
Sbjct: 417 ACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIH 476
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C + + AL ++D+++ P + TT+I+ L + + EA+ L KMLK+GI P
Sbjct: 477 RFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDP 536
Query: 399 DSVT---------------------------------FNCLLEDLCDVGRTVDADRL--R 423
VT FN ++E LC G AD+L +
Sbjct: 537 TPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGK 596
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+L + +D + T H+L+ Y R+ + M IPDL L
Sbjct: 597 VLRTASRIDAN--TCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQE 654
Query: 484 RKS 486
KS
Sbjct: 655 GKS 657
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 5/278 (1%)
Query: 209 ALGFY---DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
AL F+ DR R R P + + +++ + K A + R M +G F
Sbjct: 66 ALDFFFWSDRQWRYRHDP--IVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCC 123
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++ + K + + M + G E + + C + L + KA + G
Sbjct: 124 VMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLG 183
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
++P Y L++ C A+E++ E+ KG P ++ T++ L + R+ E
Sbjct: 184 IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++EKM +L D VT+N L+ LC +A + A +G D + Y +V Y
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSY 303
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+E R + + +VNEM G IPD+ TY + ++G S A
Sbjct: 304 CKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQA 341
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+V+++GF + + A M+ P V N+L+ CR + D A
Sbjct: 396 PNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKF 455
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E GC N V+F T+I F + + +++ +M +VT ++D L
Sbjct: 456 MEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGK 515
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDY------FG-------------------------- 335
+GR+ +A EL + ++G+ P Y +G
Sbjct: 516 KGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFN 575
Query: 336 -LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKML 392
++EKLC GN A +++ ++ + + C L+E LRKG+ A + +M
Sbjct: 576 QVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESY--LRKGIPLSAYKVACRMF 633
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
++PD + + L G++ +AD L L +G
Sbjct: 634 SRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERG 671
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 19/356 (5%)
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS---CPEME 154
W S I +F+H+ T++ +V L S E+ + + C D +F C M
Sbjct: 49 WISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKI-TILMIKSCNSVRDALFVVDFCRTMR 107
Query: 155 RIFHFAVNAFVKANRMNDGLLAF------EAMRKLIDG------RPSVSIYNVLINGFVK 202
+ F + + N+ L + E M++L P + +N L+NG+ K
Sbjct: 108 KGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+A + +++ PD T+ I+G CR K+ D A +F+EM + GC+ N VS
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ LI G F +K DE +++ +M + C + T +L+D LC G+ +A L S
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G+ P D Y L++ C A +++ + + G +P+VI LI+G +K V
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF--CKKNV 345
Query: 383 -EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+A GL+ KML++ ++PD +T+N L+ C G A RL L GL P+ T
Sbjct: 346 HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 40/277 (14%)
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
CR K F ++ ++ P +N L+S R + L+ EM E +P++ +
Sbjct: 103 CRTMRKGDSF---EIKYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYT 157
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FNTL+ G+ C G V++A + V
Sbjct: 158 FNTLVNGY-----------------------------------CKLGYVVEAKQYVTWLI 182
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ G P F Y + C A +V E+ + G + ++ T LI GL +K
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA L+ KM + P+ T+ L++ LC G+ +A L S G+ PD Y +L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + E L+ ML+ G +P++ TYN+ + G
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG 339
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Query: 337 VEKLCGEGNAGIALEVVDELWKK--GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
V C G + E+ +L K NL S +A L+E ++RL +ML++
Sbjct: 99 VVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYT---------EMLED 149
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD TFN L+ C +G V+A + G DPD TY ++G+ R
Sbjct: 150 LVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA 209
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ EM G + +Y + GL A+K
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 205/471 (43%), Gaps = 63/471 (13%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
Q++P H + + H T F W S ++H+ F+ ++ L F+
Sbjct: 68 QLSPQLKAHHVAEIVAVHKD-TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAP 126
Query: 128 L-HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN--------AFVKANRMNDGLLAFE 178
H + I A C N+ E+ R+ F + N + L FE
Sbjct: 127 ADHIRILMIKA----CRNE-----EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFE 177
Query: 179 AM-------RKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ +++++ +PS+ +N LIN K + +A ++ + + PDV T+
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYT 237
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI G CRN+ DLA G+F M ++GC+PN V+++TLI G E + DE ++M EMIE
Sbjct: 238 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E + T + + LC +A ELV +RG P Y L+ L G +A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGL----------------------------RRLRKG 381
+ + ++ K+G +P+ + LI L + KG
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 382 V-------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ +A L EKMLK G LP VT+N L+ G +A RL L G +PD
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ LVSG+++ + + EM++ G P+ +Y + +DG S K
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 1/279 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ ++ FE M K+ P+V YN LING++ + A D M + +PD T+N
Sbjct: 424 IEKAMVLFEKMLKM-GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+SGF + K + A F+EM E G NPN VS+ LI G + K D +++ M E+
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC + + +++GL E R +A ++ +G+LP Y L++ LC G A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ ++ K+ LP++ ++LI GL + K EA L+++M ++G+ PD VTF L++
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+GR A L G P+ TY +L+ G +E
Sbjct: 663 FVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 35/328 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+V Y LI+G + + + A+G Y +M+++ + P+ VT+N LI+ C +F AL
Sbjct: 335 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 247 -----------------------------------LFREMREKGCNPNVVSFNTLIRGFF 271
LF +M + G P VV++NTLI G+
Sbjct: 395 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + M E GCE T LV G G++ A + G+ P
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ +G IAL ++ + + G P+V + +I GL + + EA + +KM
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+++G+LP+ +T+ L++ LC GRT A ++ + P+ TY L+ G +E +
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 634
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG 479
E E L+ EM +G PD T+ S +DG
Sbjct: 635 DEAEILLKEMERKGLAPDEVTFTSLIDG 662
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFY 213
++ +N R + L F M +G S++ YN +I G + +KA+ +
Sbjct: 376 YNALINELCVGGRFSTALKIFHWM----EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M++ P VVT+N LI+G+ + A L M+E GC P+ ++N L+ GF
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K + EM+E G + V+ L+DG +G+V A L+ G P Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ L E A ++ D++ ++G LP+VI TTLI+GL R + A + M K
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
LP+ T++ L+ LC G+ +A+ L KGL PD +T+ L+ G+ R
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 671
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLS 481
L+ M+D G P+ TY+ + GL
Sbjct: 672 AFLLLRRMVDMGCKPNYRTYSVLLKGLQ 699
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 164/364 (45%), Gaps = 36/364 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ + L + + D P V Y LI G + R D A G +DRM
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQY-DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--------------------- 255
V++ P+ VT++ LI+G C + D AL + EM EKG
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319
Query: 256 --------------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
C PNV ++ LI G K + + + ++M++ G ++VT L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++ LC GR A ++ G L Y +++ LC G+ A+ + +++ K G
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
LP+V+ TLI G A+ L++ M + G PD T+N L+ G+ A
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
GL+P+ ++Y L+ G++++ + +L+ M + G P++ +YN+ ++GLS
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 482 NARK 485
+
Sbjct: 560 KENR 563
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 3/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N R+++ L E M K I+ P+V Y + I ++A+ RM +
Sbjct: 275 INGLCNEGRVDEALDMLEEMIEKGIE--PTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+P+V T+ LISG R K ++A+GL+ +M ++G PN V++N LI +F
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + + M G ++ T ++ GLC G + KA L + G LP Y L+
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+GN A ++D + + G P L+ G + K AS ++M++ G+ P+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V++ L++ G+ A L G +P+ +Y+ +++G ++ENR E E + +
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
+M+++G +P++ TY + +DGL
Sbjct: 573 KMVEQGLLPNVITYTTLIDGL 593
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N K NR ++ A + K+++ P+V Y LI+G + A +
Sbjct: 551 YNAVINGLSKENRFSE---AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 607
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + + P++ T++ LI G C+ K D A L +EM KG P+ V+F +LI GF
Sbjct: 608 DMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLG 667
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ D + M+++GC+ + T +L+ GL E +L+
Sbjct: 668 RIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 37/366 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++++ + M L P++ Y+ LING+V + + A G M
Sbjct: 233 VNAFCKDGKVDEAAGFVKKMENL-GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC-NPNVVSFNTLIRGFFGERKFDEG 279
V +VVT+ +LI G+C+ K D A + R M+E+ P+ ++ LI G+ K D+
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + EM+ LG + + C L++G C G + +A ++ + P + Y L++
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ A + D++ ++G P+V+ TL++GL R+ +A + M+K G+ PD
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD 471
Query: 400 SV-----------------------------------TFNCLLEDLCDVGRTVDADRLRL 424
V TFN ++ LC +G+ V+A+ +
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PDG+TY L+ GY + + + + M E P + YNS + GL +R
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 591
Query: 485 KSVRQT 490
+ V T
Sbjct: 592 RLVEVT 597
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 161/371 (43%), Gaps = 67/371 (18%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN L+ G + FD AL + M++ V PD V ++ L+ G + + F+ A L
Sbjct: 435 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 494
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++++ +G + ++FNT+I G K E + +M +LGC +T L+DG C
Sbjct: 495 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 554
Query: 308 EG-----------------------------------RVLKACELVIDFSRRGVLPKDFD 332
R+++ +L+ + RG+ P
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ C EG A E+ + G ++I C+T++ GL RL + EA+ LM+KM+
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 393 KEG--------------------------------ILPDSVTFNCLLEDLCDVGRTVDAD 420
G +LP+++ +N + LC G+ DA
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R + S KG PD TY L+ GY+ E L +EML G +P++ TYN+ ++GL
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794
Query: 481 SNARKSVRQTR 491
+ R R
Sbjct: 795 CKSENVDRAQR 805
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 15/397 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM-- 153
F + S +FR + ++ +V L+ + E + LN + + C + G E+
Sbjct: 89 FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-VDLCKFKDRGNVIWDELVG 147
Query: 154 --------ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCR 204
+F + +V+ + L F+ M K GR PS+ N L+N VK
Sbjct: 148 VYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC--GRIPSLRSCNSLLNNLVKNG 205
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E A Y +M+R + PDV +I+++ FC++ K D A G ++M G PN+V+++
Sbjct: 206 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 265
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + + M E G + VT +L+ G C + ++ +A +++
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 325 GVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
L D +G L++ C G A+ ++DE+ + G ++ C +LI G + + E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A G++ +M+ + PDS ++N LL+ C G T +A L +G++P +TY+ L+
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G R + + + M+ G PD Y++ +DGL
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + K +++ A + +++D +P YN L++G+ + +A D+M++
Sbjct: 374 INGYCKRGEIHE---AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ ++P V+T+N L+ G CR FD AL ++ M ++G P+ V ++TL+ G F F+
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +++ G S +T ++ GLC G++++A E+ G P Y L++
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C N G A +V + ++ PS+ +LI GL + R+ VE + L+ +M G+ P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ L++ C G A + GL + + +VSG R R E L+
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670
Query: 459 NEMLDEGFIPD 469
+M+D GF PD
Sbjct: 671 QKMVDHGFFPD 681
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + + K +M++ M++ P Y VLI+G+ + + D A+ D M
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R +K ++ N LI+G+C+ + A G+ M + P+ S+NTL+ G+ E
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E N+ +M++ G E + +T L+ GLC G A ++ +RGV P + Y L
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTL 478
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L N A + ++ +G S I T+I GL ++ K VEA + +KM G
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +T+ L++ C A +++ + + P Y+ L+SG + R E +
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 598
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L+ EM G P++ TY + +DG
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDG 621
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 153/356 (42%), Gaps = 33/356 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K +M + F+ M+ L P Y LI+G+ K +A M
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDL-GCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ + P + +N LISG ++++ L EM +G PN+V++ LI G+ E
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA-----------------CELVI 319
D+ + +EM E G + + C +V GL GR+ +A C L
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688
Query: 320 DFSRRGV---------------LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
D + LP + Y + LC G A L KG +P
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TLI G EA L ++ML+ G++P+ VT+N L+ LC A RL
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+ +TY+ L+ GY + L ++M++EG P + TY++ ++GL
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ A+ K +++D F +M L P Y LI+G+ D+A D
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFF-SMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R + P++VT+N LI+G C+++ D A LF ++ +KG PNVV++NTLI G+
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +MIE G S VT L++GLC G + ++ +L+ + GV K +Y
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 336 LVE 338
LV+
Sbjct: 895 LVQ 897
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +YN+ I G K + D A F+ + PD T+ LI G+ D A L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G PN+V++N LI G D + +++ + G + VT L+DG C
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A +L G+ P Y L+ LC G+ ++++++++ K G +I
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
TL++G R SG M+K+ K L D + CL
Sbjct: 892 YCTLVQGYIR-------SGEMQKIHK---LYDMMHIRCL 920
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 53 IYNTIIDGLCKYKHMDDALNLFKEMETKGI--RPNVVTYSSLISCLCNYGRWSDASRLLS 110
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDV TF+ LI F + K A L+ EM ++ +P++V++++LI GF
Sbjct: 111 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 170
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M+ C VT L+ G C RV + E+ + S+RG++ Y
Sbjct: 171 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 230
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A E+ E+ G P+++ TL++GL + K +A + E + +
Sbjct: 231 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 290
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ YN+
Sbjct: 351 DALFKEMKEDGTLPNSGCYNT 371
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V ++ LI+ FVK + +A YD MV+ + P +VT++ LI+GFC + + D A +
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ +EG+ + EM + G ++VT IL+ GL
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A E+ + GV P Y L++ LC G A+ V + L + P++
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 298
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ PD V +N ++ C G +AD L
Sbjct: 299 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ Y+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 359 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 415
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 139/276 (50%)
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ DRMV +PD+VT+ ++++G C+ DLA L +M + P V+ +NT+I G
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ D+ +N+ EM G + VT L+ LCN GR A L+ D R + P
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + L++ EG A ++ DE+ K+ PS++ ++LI G + EA + E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M+ + PD VT+N L++ C R + + S +GL + +TY+IL+ G +
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + EM+ +G P++ TYN+ +DGL K
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 276
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ ++D + KG P ++ ++ GL + A L+ KM + + P + +N +++
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC DA L TKG+ P+ +TY L+S R + L+++M++ PD
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 470 LATYNSYMDGLSNARKSVRQTR 491
+ T+++ +D K V +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEK 142
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F + L +P V YN +I+GF + ++A + M
Sbjct: 299 YNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ +N LI R+ + + L +EMR G
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYD--RMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P+ + YNVL VK D A+ D R+ R+ KPD ++N +I G CR + A
Sbjct: 270 PTTATYNVL----VKAHCSDAAVPIDDAVRVFRNIPKPDACSYNTVIDGLCRRGRLPEAR 325
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF EM G P VV++ TLI E FD+ + + EM G + VT L+DGL
Sbjct: 326 DLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGL 385
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR A EL+ + LP Y +++ LC EG G A+E++D + +G P
Sbjct: 386 CKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDA 445
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVD 418
LI GL + +EAS +++M GI P+ +T+ + ++ LC G V
Sbjct: 446 GLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVR 505
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ T+G+ T+H+LV +++N ++ ++V +ML E IP+ T+++ +
Sbjct: 506 AFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVR 565
Query: 479 GLSNARK 485
+ +K
Sbjct: 566 AYWSKKK 572
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 47/269 (17%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK--FDEGVNMAY 284
++ +++ + LA L +MR G P ++N L++ + D+ V +
Sbjct: 239 SYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFR 298
Query: 285 EMIEL-GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+ + C +++V +DGLC RRG LP+ D F
Sbjct: 299 NIPKPDACSYNTV-----IDGLC----------------RRGRLPEARDLFA-------- 329
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
E+ G P+V+ TTLI L R +A L ++M + GI+P+ VT+
Sbjct: 330 -----------EMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTY 378
Query: 404 NCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ L++ LC GR A L R++ K P+ +TY ++ G +E + +++ M
Sbjct: 379 SSLIDGLCKGGRAASAVELLDRMVKERK--LPNTITYSSVIDGLCKEGCLGQAMEILDRM 436
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+G PD + + GL +A +++ +
Sbjct: 437 RLQGRKPDAGLFGKLIVGLCDAGRALEAS 465
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 204/457 (44%), Gaps = 23/457 (5%)
Query: 30 SRPETPPV-TLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLH----H 84
S P+ P V +L + + T+ + +KT + P + P ++ FL K+
Sbjct: 12 SHPKPPWVQSLHTSAIQETSISDEVFTVIKT--MNPMEPALEP--MVPFLSPKIVTSIIQ 67
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH-SVLNFISANPCPCS 143
+P F F WAS FR + L + L + EL+ L +
Sbjct: 68 NPPNPQLGFRFFIWASNFKRFRAWESCDL--ITDLLINQNGLELYCQTLEALKNGGIKVH 125
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
ND F + ++K + + F +MR D P V YN++++ ++
Sbjct: 126 NDAFF----------VLIKVYLKMGLTDKAMETFGSMRDF-DCTPDVYTYNMILDVLIQK 174
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
AL Y RM++ P+V TF+ILI G C++ AL LF EM ++G P+ ++
Sbjct: 175 NFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTY 234
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
+I G ++ D+ + +M + G VTC L++G C RV +A L+ F +
Sbjct: 235 CVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEK 294
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G + Y L+ L + ++ + P V T +++GL K +
Sbjct: 295 DGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRD 354
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L+ +M + G++PD+V +N L++ CD+G +A L+L S P+ TY IL+S
Sbjct: 355 ALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILIS 414
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G R ++ + + NEM G P T+NS +DGL
Sbjct: 415 GMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGL 451
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 161/375 (42%), Gaps = 55/375 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ K+ + D L F+ M R ++ P Y V+I+G + + D A +D
Sbjct: 199 FSILIDGLCKSGNVKDALHLFDEMTQRGIL---PDAFTYCVVISGLCRSKRVDDAYRLFD 255
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M V PD VT N L++GFC + D A L R + G +V ++ LIRG F +
Sbjct: 256 KMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAK 315
Query: 275 KFDEGVNMAY------------------------------------EMIELGCEFSSVTC 298
++ E V + Y EM E G +V
Sbjct: 316 RY-EDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCY 374
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+L+ G C+ G + +A L ++ SR P Y L+ +C G A E+ +E+ K
Sbjct: 375 NVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEK 434
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-----------LKEG--ILPDSVTFNC 405
G PS + +LI+GL + + +A L KM L +G + DS +
Sbjct: 435 LGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQK 494
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
++E LCD G A R+ + + G P TY+ILV+G+ + L EM +G
Sbjct: 495 MVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG 554
Query: 466 FIPDLATYNSYMDGL 480
PD TY + ++GL
Sbjct: 555 LSPDTVTYGTLINGL 569
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 160/354 (45%), Gaps = 37/354 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFY 213
++ + +A ++ D A E + ++ + P YNVLI GF +A
Sbjct: 338 LYTIMMKGLAEAGKVRD---ALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQ 394
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ R P+V T++ILISG CRN A +F EM + GC P+ V+FN+LI G
Sbjct: 395 LEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKT 454
Query: 274 RKFDEGVNMAYEMIELGCE--------------FSSVTCEILVDGLCNEGRVLKACELVI 319
+ ++ + Y+M E+G S + + +V+ LC+ G + KA +++
Sbjct: 455 GQLEKAHLLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILM 513
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ G P + Y LV C GN A ++ E+ KG P + TLI GL R +
Sbjct: 514 QLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQ 573
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-----LRLLASTKGLDPD 434
+ +A + ++M K G PD+ + ++ +C R ++ R L+ L + + + +
Sbjct: 574 REEDAYKVFDQMEKNGCTPDAAVYRTMMTWMC---RRMELPRAFSLWLKYLRNIRSQEDE 630
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP---DLATYNSYMDGLSNARK 485
+ + GY ++E E V +L+ F DL Y ++ GL R+
Sbjct: 631 AIK---AIEGYF---EKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRR 678
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
F +LI + + D A+ F MR+ C P+V ++N ++ + + + M
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
++L C + T IL+DGLC GN
Sbjct: 188 MKLNCLPNVATFSILIDGLCKS-----------------------------------GNV 212
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
AL + DE+ ++G LP +I GL R ++ +A L +KM G+ PD VT N L
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C + R +A L L G D Y L+ G R R ++ + L +M+++
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNV 332
Query: 467 IPDLATYNSYMDGLSNARK 485
PD+ Y M GL+ A K
Sbjct: 333 KPDVYLYTIMMKGLAEAGK 351
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 9/385 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E S++ + + S +F+ +
Sbjct: 5 TNSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + F R+ P + VL +K + F F
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVL-EHLMKLKYFKLVWSF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ R + FNIL+ FC+ + LA +F + + G P+VVSFNTL+ G+
Sbjct: 124 YKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIK 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ +A +L + RG++P
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ +G P I TLI GL + +A L ++M
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D ++Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYNSYM 477
+ E ++ EML G PD TY M
Sbjct: 364 DAEKMLREMLSVGLKPDTGTYTIVM 388
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L + +++++ R S+Y N+L++ F K E A +D + + ++P VV+FN L+
Sbjct: 119 LVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLM 178
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G+ + D L M G P+V +++ LI G E K DE + EM++ G
Sbjct: 179 NGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLV 238
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L+DG C G++ A E+ +G P Y L+ LC +G+ A ++
Sbjct: 239 PNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDL 298
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
DE+ KG P I TTLI+G + A ++M+KE I D V++ L+ LC
Sbjct: 299 XDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCK 358
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR+VDA+++ + GL PD TY I++ + + K G L+ EM +G +P + T
Sbjct: 359 EGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 3/270 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + F+ + K RPSV +N L+NG++K
Sbjct: 127 ILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKW-GLRPSVVSFNTLMNGYIKLG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ M V+PDV T+++LI+G C+ K D A LF EM ++G PN V+F
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G K D + + +M+ G +T L+ GLC +G + +A +L + S +
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ A E + K+ ++ T LI GL + + V+A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDA 365
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ +ML G+ PD+ T+ ++ + C G
Sbjct: 366 EKMLREMLSVGLKPDTGTYTIVMHEFCKNG 395
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 36/246 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N ++K +++G AM +P V Y+VLING K + D+A +D M
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKSAMHA-SGVQPDVYTYSVLINGLCKESKMDEAHKLFDEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTF LI G C+N K DLA+ ++++M +G +P+ +++NTLI G +
Sbjct: 233 LDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDL 292
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDG-------------------------------- 304
+ ++ EM G + +T L+DG
Sbjct: 293 XQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTAL 352
Query: 305 ---LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
LC EGR + A +++ + G+ P Y ++ + C G+ + +++ E+ + G+
Sbjct: 353 ISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGH 412
Query: 362 LPSVIA 367
+P VI
Sbjct: 413 VPCVIT 418
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 223/478 (46%), Gaps = 28/478 (5%)
Query: 16 KSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPS--S 73
KSP P+ L S TP L S L + ++ + + + PS S
Sbjct: 90 KSPFSSPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVAS 149
Query: 74 LLHFLKSKLHHHPQFTHYDFHIFAWASTIDS-FRHDHTTFLFIVRSLASSYRFSELHSVL 132
L FL+S + Y+ + ++ ++S R D F++ +++ ++ + +L +
Sbjct: 150 LNLFLESLVSTK----RYEDTLQLFSEIVESGLRPDQ--FMY-GKAIQAAVKLGDLKRAI 202
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSV 190
++ + G+F +++ + K RM D F+ M +D R P+
Sbjct: 203 ELMTCMKRGGVSPGVF-------VYNVVIGGLCKEKRMKDAEKLFDEM---LDRRVAPNR 252
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
YN LI+G+ K + ++A +RM + V+P ++TFN L++G CR + + A + E
Sbjct: 253 ITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEE 312
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M G P+ ++ TL G D + ++ E + G + TC IL++ LC EG
Sbjct: 313 MEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGN 372
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ KA E++ F G+ P + +V C G+ A ++++ G P+ + +
Sbjct: 373 MEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLAS-- 427
L++ ++ EA ++KM+++G+LP+ T+N L++ GR+ DR ++L
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY---GRSCLFDRCFQILEEME 489
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KGL P+ ++Y L++ ++ E E ++ +M+ G +P+ YN +DG A K
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 12/329 (3%)
Query: 158 HFAVNAFVKA-NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
H N+ VK M + A + ++K+++ P+V YN LI+G+ + FD+ +
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KP+V+++ LI+ C++ A + +M +G PN +N LI G
Sbjct: 487 EMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAG 546
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + EM+ + VT IL++GLC +G+V++A L + +R+G+ Y
Sbjct: 547 KLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYN 606
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK---- 390
L+ GN ALE+ + + K G P++ LI G G E L+EK
Sbjct: 607 SLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGC-----GKEGLVLVEKIYQE 661
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
ML+ ++PD V +N L+ + G A L +G+ PD MTY+ L+ G+ +E R
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +NLVN+M G IP TY+ + G
Sbjct: 722 MHKVKNLVNDMKIRGLIPKTETYDILIVG 750
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 155/321 (48%), Gaps = 14/321 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+NA K M A E ++K ++ P +N ++NG+ + + +KA ++M
Sbjct: 364 LNALCKEGNMEK---AEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++P+ VT+N L+ FC K + A ++M EKG PNV ++NTLI G+ FD
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM + G + + ++ L++ LC + +L+A ++ D RGV+P Y L++
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C G A DE+ + +P+++ LI GL + K +EA L ++ ++G+
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG---- 454
D +T+N L+ G A L G+ P TYH L++G KEG
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCG-----KEGLVLV 655
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
E + EML +PD YN+
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNA 676
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+N K +KA + + + + P V FN +++G+C+ + A +M
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G PN V++N+L++ F + +E +M+E G + T L+DG +
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
+++ + ++G+ P Y L+ LC + N A ++ ++ +G +P+ LI+
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G K +A ++M+ I+P VT+N L+ LC G+ ++A+ L + KGL
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D +TY+ L+SGY+ ++ L M G P L TY+ + G
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG 646
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 6/280 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+I++ ++ A ++ D F+ M R+++ P++ YN+LING K + +A
Sbjct: 533 QIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV---PTLVTYNILINGLCKKGKVMEAENL 589
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ R + DV+T+N LISG+ AL L+ M++ G P + +++ LI G G
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGC-G 648
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + EM+++ V L+ G V KAC L +G+ P
Sbjct: 649 KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMT 708
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ EG +V+++ +G +P LI G +L+ A +M
Sbjct: 709 YNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMF 768
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ G P + L+ L + GR+ DAD + + KG D
Sbjct: 769 ENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKD 808
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 21/315 (6%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N LI+G+ K E AL +RM ++ + D+V++N LI+GFC+ ++D A L E+
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209
Query: 253 E-KGCNPNV--------------------VSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
E +G +V +++ T+I + + +E + EMI G
Sbjct: 210 ESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGF 269
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
VT +V+GLC +GR+ +A EL+ + + GV P Y L++ L G+A A
Sbjct: 270 LPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+L +G ++ CTTL++GL + K EA + + K ++P+S+T+ L++ C
Sbjct: 330 CQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYC 389
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
VG + L K ++P+ +TY +++GYT++ E N++ +MLD+ IP+
Sbjct: 390 KVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAY 449
Query: 472 TYNSYMDGLSNARKS 486
Y +DG A K
Sbjct: 450 VYAILIDGYCKAGKQ 464
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 4/295 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +I+ + K ++A Y+ M+ + PDVVT++ +++G C++ + A L REM+
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G +PN V++ TLI F E +++ G V C LVDGL +
Sbjct: 301 KMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPK 360
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ S+ ++P Y L++ C G+ ++ E+ +K P+VI +++I
Sbjct: 361 EAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSII 420
Query: 373 EGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
G +KG+ EA +M+KML + I+P++ + L++ C G+ A L G
Sbjct: 421 NGYT--KKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L + + + +LV+ R R E E L+ ++ G + D Y S MDG A K
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGK 533
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 161/351 (45%), Gaps = 41/351 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + K +++ A M+K++D P+ +Y +LI+G+ K + + A Y+ M
Sbjct: 420 INGYTKKGILDE---AINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKL 476
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K + V F++L++ R K+ D A L +++ +G + V++ +L+ GFF K
Sbjct: 477 SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESA 536
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+NM EM E F VT +L++GL G+ +A + G+ P Y +++
Sbjct: 537 ALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIK 595
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G ALE+ +E+ +PS I C TL+ GL + +A ++ +M GI P
Sbjct: 596 AYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655
Query: 399 DSVTFNCLL----------------EDLCDVGRTVDAD----------RLRLLASTK--- 429
+ V LL E L D+G ++ + RLR+
Sbjct: 656 NLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVL 715
Query: 430 ------GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
G D +TY+ L+ GY + K+ +ML+EG P++ TYN
Sbjct: 716 KYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYN 766
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 158/326 (48%), Gaps = 2/326 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ K+++ + F A+ KL + P+ Y LI+G+ K + ++ M
Sbjct: 350 VDGLFKSSKPKEAEDMFRALSKL-NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+V+T++ +I+G+ + D A+ + ++M ++ PN + LI G+ K +
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EM G + ++V ++LV+ L R+ +A EL+ D + RG+L +Y L++
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G AL +V+E+ +K V+ LI GL K EA + M++ G+ P+
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQ 587
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N +++ C G +A L + + P +T + LV G + ++ N++NE
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNE 647
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKS 486
M G P+L + ++ S + K+
Sbjct: 648 MSVMGIHPNLVIHRVLLNASSKSGKA 673
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 25/311 (8%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ ++N LI F + Y M+ V P+V T N+L+ +C+ LAL L
Sbjct: 8 PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R + + V++NT+I GF ++ M++ F ++TC ILV G C
Sbjct: 68 LRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCR 124
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + K E ++D G KD F L++ C G +AL++V+ + K+G L ++
Sbjct: 125 IG-LAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI G + + +A L+ ++ + + DSV FN ++D R D L
Sbjct: 184 SYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFN--IDD-----RIKKDDNLN--- 233
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG------L 480
L+ D +TY ++S Y +++ +E L EM+ GF+PD+ TY+S ++G L
Sbjct: 234 ----LEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289
Query: 481 SNARKSVRQTR 491
S A++ +R+ +
Sbjct: 290 SEAQELLREMK 300
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L++G K + +A + + + + P+ +T+ LI G+C+ + L +EM EK
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
NPNV++++++I G+ + DE +N+ +M++ ++ IL+DG C G+ A
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+L + G+ + + LV L A E++ ++ +G L + T+L++G
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ K A ++E+M ++ I D VT+N L+ L + G+ +A + GL P+
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQ 587
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TY+I++ Y ++ L NEM +P T N+ + GLS A
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA 635
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YN++I + K E D AL ++ M ++ P +T N L+ G + + A+ +
Sbjct: 585 PNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNV 644
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM G +PN+V L+ K + + M +++++G + + L+ C
Sbjct: 645 LNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCR 704
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
KA ++ R G + Y L+ C + AL ++ +G P+++
Sbjct: 705 LRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVT 764
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ GL E L +KM + G+ PD+ T++ L+ +G ++ RL
Sbjct: 765 YNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMV 824
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G P TY++L+S + + + + L+NEM G P +TY+ + G N K
Sbjct: 825 AQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 17/281 (6%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
I +NA K+ + N L E +L+D + + YN LI F + R KA
Sbjct: 659 IHRVLLNASSKSGKANAVLQMHE---QLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVL 715
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M+RD D VT+N LI G+C + AL + +M +G +PN+V++N L+ G G
Sbjct: 716 KYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGA 775
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
E + +M E G + T + L+ G G ++ L + +G +PK Y
Sbjct: 776 GLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTY 835
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL----------RRLRK--G 381
L+ G A E+++E+ +G PS LI G R L+K
Sbjct: 836 NVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR 895
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+A L+ +M +G +P T C+ G+ +DA++L
Sbjct: 896 TDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKL 936
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 47/293 (16%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ I+ VL+N K + + L ++++V +K + +N LI FCR + A +
Sbjct: 655 PNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSV 714
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M G + V++N LIRG+ C
Sbjct: 715 LKYMIRDGFVADTVTYNALIRGY-----------------------------------CE 739
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V KA GV P Y L+ L G G E+ D++ + G P
Sbjct: 740 SSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDAST 799
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI G ++ E+ L +M+ +G +P + T+N L+ D VG+ A L
Sbjct: 800 YDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQ 859
Query: 428 TKGLDPDGMTYHILVSGYTRENR------------RKEGENLVNEMLDEGFIP 468
+G+ P TY IL+ G+ ++ R + +NL+ EM D+GF+P
Sbjct: 860 VRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVP 912
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 163/350 (46%), Gaps = 39/350 (11%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+M A + +R+ I+G+ +V +Y+ +I+G K + A G Y M+ R+ P V
Sbjct: 170 KMGQTRAALQVLRQ-IEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTV 228
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTF+ LI GFC KF A LF EM K NP+ +FN L+ E K E N+
Sbjct: 229 VTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAV 288
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR---------------------- 323
M++ G E + VT L+DG C V KA ++ SR
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKM 348
Query: 324 -------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
RG+ P Y L++ LC G A E+VDE+ ++ +
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNS 408
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+ + + +A L++K+ + GI P+ T+N L++ LC G+ +A + KG
Sbjct: 409 LIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + TY+I+++G +E E E L+++M D G IPD TY + + L
Sbjct: 469 YNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 138/288 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +LING K + AL ++ V +VV ++ +I G C++K A GL+ EM
Sbjct: 161 YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMI 220
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
K P VV+F++LI GF KF + + EM+ + T ILVD LC EG++
Sbjct: 221 VKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIK 280
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ + GV P Y L++ C G A V+ + + P+ + +I
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++ EA L +M GI P VT+N L++ LC GR A L +
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP 400
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ L+ + + + LV ++ + G P++ TYN +DGL
Sbjct: 401 ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI GF +F A ++ MV + PD TFNIL+ C+ K A +
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285
Query: 248 FREMREKGCNPNVVSFNTL-----------------------------------IRGFFG 272
M ++G P VV++NTL I GF
Sbjct: 286 IAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCK 345
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF- 331
+ DE + + +EM G VT L+DGLC GR+ A ELV D +P D
Sbjct: 346 IKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV-DEMHNNCIPADIV 404
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C + A+ +V ++ + G P++ LI+GL + + A + + +
Sbjct: 405 TYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDL 464
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L +G ++ T+N ++ LC G +A+ L G+ PD +TY ++ ++
Sbjct: 465 LIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDEN 524
Query: 452 KEGENLVNEMLDEGFI 467
++ + L+ EM+ +G +
Sbjct: 525 EKAQKLLREMVIKGVV 540
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 135/274 (49%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ ++AL F+D ++ + VT+ ILI+G C+ + AL + R++ K N NVV ++
Sbjct: 138 KVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYS 197
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
T+I G ++ + + EMI + VT L+ G C G+ A L + +
Sbjct: 198 TIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK 257
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
+ P + + LV+ LC EG A V+ + K+G P+V+ TL++G + + +A
Sbjct: 258 NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKA 317
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++ + + + P+S ++N ++ C + +A L +G+ P +TY+ L+ G
Sbjct: 318 KHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDG 377
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ R LV+EM + D+ TYNS +D
Sbjct: 378 LCKAGRIPYAWELVDEMHNNCIPADIVTYNSLID 411
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 27/344 (7%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR-EFDKALGFYDRMVRDR 220
N FV +++ +L+F MR+ I PS+ +N ++ +K + + L +M
Sbjct: 43 NGFV----VDNAVLSFNRMRQ-IRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKG 97
Query: 221 VKPDVVTFNILIS---------------------GFCRNKKFDLALGLFREMREKGCNPN 259
VKPD+ T +ILI+ G C N K + AL + G + N
Sbjct: 98 VKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLN 157
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V++ LI G + + + ++ + V ++DGLC + V A L
Sbjct: 158 HVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYS 217
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ + + P + L+ C G A + +E+ K P L++ L +
Sbjct: 218 EMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEG 277
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
K EA ++ M+KEG+ P VT+N L++ C V A + + S + P+ +Y+
Sbjct: 278 KIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYN 337
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
I+++G+ + E L +EM G P TYNS +DGL A
Sbjct: 338 IMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKA 381
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 121/291 (41%), Gaps = 58/291 (19%)
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK-FDLALGLFREMREKGC 256
NGFV D A+ ++RM + R P +V FN +++ + K + L L +M KG
Sbjct: 43 NGFV----VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGV 98
Query: 257 NPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P++ + + LI + G+ F A+ SV +IL GLC G+V +A
Sbjct: 99 KPDLFTLSILINCYCHLGQMTF------AF----------SVFAKILKMGLCLNGKVNEA 142
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
G Y L+ LC G AL+V+ ++ K +V+ +T+I+G
Sbjct: 143 LLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDG 202
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + + +A GL +M+ + I P VTF+ L+ C VG+ DA R
Sbjct: 203 LCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFR------------- 249
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L NEM+ + PD T+N +D L K
Sbjct: 250 ----------------------LFNEMVMKNINPDAYTFNILVDALCKEGK 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ YN LI+ F K + DKA+ ++ ++P++ T+NILI G C+ + A +F+
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
++ KG N N ++N +I G E FDE + +M + G +VT E ++ L ++
Sbjct: 463 DLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKD 522
Query: 310 RVLKACELVIDFSRRGVLPKDFD 332
KA +L+ + +GV+ F+
Sbjct: 523 ENEKAQKLLREMVIKGVVVYAFE 545
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 42/333 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFY-----DRMVRDRVKPDVVTFNILISGFCRNKKFD 242
PSV+ YN LI+G+ C++ ++ MV + P VTF +LI+G+C+N
Sbjct: 224 PSVATYNSLIDGY--CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ +F EM+++G +VV++N+LI G E K +EGV + EM +LG + +T ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C +G + A + + + R V P Y L++ G A+ V + + KKG
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V LI G R ASGL+++M ++GI D VT+N L+ LC G A +L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 423 RLLASTKGLDPDGMTYHILVSGY-------------TR-ENRRK---------------- 452
S GL+P+ +TY+ ++ G+ TR E RK
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 453 -----EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E +L+NEMLD+ +P+ TY + +G+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 12/311 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS S N L+ G V + D A + +R RV PD+ TFN +ISG CR + A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY------EMIELGCEFSSVTCEI 300
+ ++++ G P+V ++N+LI G+ +K G NM + EM+E G ++VT +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYC--KKGGAG-NMYHVDMLLKEMVEAGISPTAVTFGV 269
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C A + + ++G+ Y L+ LC EG +++++E+ G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+ I +++G + +A+ ++ M + + PD V +N L++ +G+ DA
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ + KG+ P+ TY+ L++G++R + L++EM ++G D+ TYN + L
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449
Query: 481 ---SNARKSVR 488
RK+V+
Sbjct: 450 CCKGEVRKAVK 460
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++ +G+ E M L P+ + ++ GF K A + D M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDL-GLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDVV +NILI + R K + A+ + M +KG +PNV ++N LI GF +
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM E G E VT +L+ LC +G V KA +L+ + S G+ P Y +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +GN A E+ + K +V+ I+ ++ K EA+ L+ +ML + +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540
Query: 397 LPDSVTFNCLLEDLCDVGRTVD 418
+P+ +T+ + E + + G T D
Sbjct: 541 VPNGITYETIKEGMMEKGYTPD 562
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 13/305 (4%)
Query: 150 CPEMERIFHFA--VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCRE 205
CP+ +F F+ +N K R+++G L F+ M + L+ P+ + VLI+G K +
Sbjct: 209 CPD---VFTFSALINGLCKEGRLDEGSLLFDEMCGKGLV---PNGVTFTVLIDGQCKGGK 262
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D AL + M+ V+PD+VT+N LI+G C+ A L EM G P+ ++F T
Sbjct: 263 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTT 322
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G + + + M+E G E V +L+ GLC +GRV A ++ D G
Sbjct: 323 LIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG 382
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P D Y +V+ C +GN + +++ E+ G++P V+ L+ GL + + A
Sbjct: 383 FKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAK 442
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L++ ML G+ P+ +T+N LLE G +VD D + S KGL D +Y LV+
Sbjct: 443 MLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVD---IFNSEKGLVKDYASYTALVNES 499
Query: 446 TRENR 450
++ ++
Sbjct: 500 SKTSK 504
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 146/293 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +NVL++GF K A +D + + ++P VV+FN LISG C+ + L
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + P+V +F+ LI G E + DEG + EM G + VT +L+DG C
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V A + +GV P Y L+ LC G+ A +V+E+ G P I
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + A + +M++EGI D V F L+ LC GR DA+R+
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G PD TY ++V + ++ G L+ EM +G +P + TYN+ M+GL
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGL 432
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 158/331 (47%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F K + L F+ + K RP+V +N LI+G K ++ M
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKR-GLRPTVVSFNTLISGCCKAGAVEEGFRLKGVM 203
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+RV PDV TF+ LI+G C+ + D LF EM KG PN V+F LI G K
Sbjct: 204 ESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKV 263
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + M+ G VT L++GLC G + +A LV + S G+ P + L
Sbjct: 264 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTL 323
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G+ ALE+ + ++G +A T LI GL R + +A ++ ML G
Sbjct: 324 IDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGF 383
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ +++ C G +L + G P +TY+ L++G ++ + K +
Sbjct: 384 KPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKM 443
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L++ ML+ G P+ TYN ++G S SV
Sbjct: 444 LLDAMLNVGVAPNDITYNILLEGHSKHGSSV 474
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E +++ FY ++ P+ FN+L+ GFC+ A +F E+ ++G P VVSFN
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G +EG + M T L++GLC EGR+ + L + +
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G++P + L++ C G +AL+ + +G P ++ LI GL ++ EA
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ +M G+ PD +TF L++ C G A ++ +G++ D + + +L+SG
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
R+ R + E ++ +ML GF PD TY +D
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVD 395
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---LRKGVE 383
P +F +F L+ C G G A V DE+ K+G P+V++ TLI G + + +G
Sbjct: 139 PPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFR 198
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
G+ME E + PD TF+ L+ LC GR + L KGL P+G+T+ +L+
Sbjct: 199 LKGVMES---ERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLID 255
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + + ML +G PDL TYN+ ++GL
Sbjct: 256 GQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGL 292
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
E + LEV+D G P+ L+ G ++ A + +++ K G+ P V+
Sbjct: 124 ERSWAFYLEVLDS----GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVS 179
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
FN L+ C G + RL+ + ++ + PD T+ L++G +E R EG L +EM
Sbjct: 180 FNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC 239
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
+G +P+ T+ +DG K
Sbjct: 240 GKGLVPNGVTFTVLIDGQCKGGK 262
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 10/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + +F K R L M +L +V+ Y ++ G E D A +D M
Sbjct: 149 YTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVA-YCTVVAGLYDSGEHDHARELFDEM 207
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PDVV FN L+ C+ + L ++ ++G PN+ +FN ++G E
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267
Query: 277 DEGVNMAY---------EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
D V + +M+ G E +T ++DG C +G V A ++ D +G
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P +F Y L+ C +G+ A+ V + KG PS++ TLI+GL + + A L
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
M +M + G LP+ T+N ++ LC +G DA L A KG PD TY+ L+ GY +
Sbjct: 388 MNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCK 447
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + +VN M +G PD+ TYN+ ++GL A KS
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKS 486
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 47/380 (12%)
Query: 99 ASTIDSFRHDHTTFLF---IVRSLA-SSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
A DS HDH LF + R L F++L VL C +F E E
Sbjct: 189 AGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVL---------CKKGLVF---ESE 236
Query: 155 RIFH-----------FAVNAFV----------KANRMNDGLLAFEAMRKLIDG--RPSVS 191
R+ F N FV +A R + + A E +RK+++G P
Sbjct: 237 RLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRV----KPDVVTFNILISGFCRNKKFDLALGL 247
YN +I+G+ K A +R+++D V KPD T+ LI+GFC++ D A+ +
Sbjct: 297 TYNSIIDGYCKKGMVQDA----NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAV 352
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F++ KG P++V +NTLI+G + + + EM E GC + T ++++GLC
Sbjct: 353 FKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCK 412
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V A LV D +G P F Y L++ C + A E+V+ +W +G P VI
Sbjct: 413 MGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVIT 472
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ GL + K E + + M ++G P+ +T+N +++ LC + +A L
Sbjct: 473 YNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMK 532
Query: 428 TKGLDPDGMTYHILVSGYTR 447
+KGL PD +++ L +G+ +
Sbjct: 533 SKGLKPDVVSFGTLFTGFCK 552
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 1/295 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y LINGF K + D+A+ + + ++P +V +N LI G + AL
Sbjct: 327 KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQ 386
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM E GC PN+ ++N +I G + ++ + I GC T L+DG C
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYC 446
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ ++ A E+V +G+ P Y L+ LC G + +E+ + +KG P++I
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLL 425
+++ L + +K EA L+ +M +G+ PD V+F L C +G A +L R +
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ TY+I+VS ++ + L + M + G PD TY +DG
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGF 621
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 146/302 (48%), Gaps = 9/302 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKAL---------GFYDRMVRDRVKPDVVTFNILISGFCRN 238
P++ +N+ + G + D+A+ + +MV +PD +T+N +I G+C+
Sbjct: 249 PNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKK 308
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
A + ++ KG P+ ++ +LI GF + D + + + + G S V
Sbjct: 309 GMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLY 368
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ GL +G +L A +L+ + + G LP + Y ++ LC G A +VD+
Sbjct: 369 NTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIA 428
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P + TLI+G + K A+ ++ +M +G+ PD +T+N LL LC G++ +
Sbjct: 429 KGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ KG P+ +TY+I+V + + E +L+ EM +G PD+ ++ +
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548
Query: 479 GL 480
G
Sbjct: 549 GF 550
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 36/250 (14%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI+G+ K + D A +RM + PDV+T+N L++G C+ K + + +
Sbjct: 433 PDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEI 492
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+ M EKGC PN++++N ++ +K +E V++ EM G + V+ L G C
Sbjct: 493 FKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCK 552
Query: 308 EGRVLKACEL--------------------VIDFSRR----------------GVLPKDF 331
G + A +L V FS + G P ++
Sbjct: 553 IGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNY 612
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +++ C GN + + E +K +PS+ ++ L K EA G++ M
Sbjct: 613 TYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLM 672
Query: 392 LKEGILPDSV 401
L++GI+P++V
Sbjct: 673 LQKGIVPETV 682
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V++ KA ++N+ + M+ +P V + L GF K + D A + RM
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSK-GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Query: 217 VRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ V T+NI++S F ++A+ LF M+ GC+P+ ++ +I GF
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+G E +E S T +++ LC + +V +A ++ ++G++P+
Sbjct: 627 ITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE 680
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 178/408 (43%), Gaps = 40/408 (9%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIF 157
T+ IVRSL + ++ +VL+ + C C G S ++
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169
Query: 158 H------------FAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKC 203
H V+A + +++G+ E +RKL P + YN ++ G
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGV---ELLRKLPSFGCEPDIVSYNAVLKGLCMA 226
Query: 204 REFDKALGFYDRMVR----------DRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+ +D MVR PD+ + +I G C++ ++A + M
Sbjct: 227 KRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS 286
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G PNVV +NT+++G +++E ++ EM + C VT ILVD C G V +
Sbjct: 287 YGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDR 346
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
EL+ G +P Y ++ C EG A+ ++ + G P+ I+ T +++
Sbjct: 347 VIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLK 406
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL R + V+A L+ M+++G LP+ VTFN L+ +C G A L G P
Sbjct: 407 GLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSP 466
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
D ++Y ++ G + + +E L+N M+++G P+ Y+S LS
Sbjct: 467 DLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 514
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 151/296 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN ++ G +++A M ++ D VTFNIL+ FC+N D +
Sbjct: 290 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE 349
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E GC P+V+++ T+I GF E DE V + M GC+ ++++ I++ GLC
Sbjct: 350 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 409
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R + A EL+ ++G LP + L+ +C +G A A+E++ ++ G P +I
Sbjct: 410 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLI 469
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +T+I+GL + K EA L+ M+ +GI P+++ ++ + L GRT ++
Sbjct: 470 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 529
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ D Y+ ++S + + M+ G +P+ +TY + GL++
Sbjct: 530 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLAS 585
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 148/301 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +Y +I+G K + A RM +KP+VV +N ++ G C ++++ A L
Sbjct: 256 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 315
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM ++ C + V+FN L+ F D + + +M+E GC +T +++G C
Sbjct: 316 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 375
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG V +A L+ + S G P Y +++ LC A E++ + ++G LP+ +
Sbjct: 376 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT 435
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI + + +A L+++ML G PD ++++ +++ L G+T +A L +
Sbjct: 436 FNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 495
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KG+ P+ + Y + S +RE R + + + + D D A YN+ + L ++
Sbjct: 496 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETD 555
Query: 488 R 488
R
Sbjct: 556 R 556
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VV +N +I+G+CR + A L + PN ++ ++R + + +
Sbjct: 76 VVAYNAMIAGYCRAGQVAAARRLAAAVPVP---PNAYTYFPIVRSLCARGLIADALTVLD 132
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
EM GC + C ++++ C G A + +G + +V +C +G
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK----------E 394
+E++ +L G P +++ +++GL ++ + LM +M++
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEH 252
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD + +++ +C G A+ + + GL P+ + Y+ ++ G R +E
Sbjct: 253 GCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEA 312
Query: 455 ENLVNEMLDEGFIPDLATYNSYMD 478
E+L+ EM E D T+N +D
Sbjct: 313 EDLLAEMFQEDCPLDDVTFNILVD 336
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 176 AFEAMRK-LIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +++ L++G P + Y+ +I+G K + ++AL + M+ + P+ + ++ + S
Sbjct: 452 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 511
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
R + D + +F +++ + +N +I + D ++ M+ GC
Sbjct: 512 ALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMP 571
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLV 337
+ T IL+ GL +EG V +A +L+ + SRR V +FG+V
Sbjct: 572 NESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHFGIV 616
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +N LIN K ++A+ +M+ + PD+++++ +I G + K + AL L
Sbjct: 431 PNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 490
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M KG PN + ++++ E + D+ + M + + + ++ LC
Sbjct: 491 LNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCK 550
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+A + G +P + Y L+ L EG A +++ EL +
Sbjct: 551 RWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++ G C G+V A L V P + YF +V LC G AL V+DE+ +G
Sbjct: 82 MIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRG 138
Query: 361 NLPSVIACTTLIEGLRR---LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+ C ++E R R V A ++ + +G DS N ++ +C+ G
Sbjct: 139 CAATPPMCHVILEAACRGGGFRSAVRA---LQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML----------DEGFI 467
+ L + G +PD ++Y+ ++ G R + E L+ EM+ + G
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCT 255
Query: 468 PDLATYNSYMDGL 480
PDL Y + +DG+
Sbjct: 256 PDLRMYATIIDGI 268
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 164/376 (43%), Gaps = 41/376 (10%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
+C E + VN+ KA + F M G RP+ IY LI+GF K
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA--SGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A +D MV +PDV+T ++I G C++ F+ A F EM GC PNVV++ T+I
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+G + + MI GC SVT L+DG C GR+ +A +L+ + +
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467
Query: 328 PKDFDYFGLVEKLCGEGNA--------------------GIALEVVDELWKKGNL----- 362
P Y LV LC G+ G+ ++ L K G L
Sbjct: 468 PNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACR 527
Query: 363 -----------PSVIACTTLIEGLRRLRKG-VE-ASGLMEKMLKEGILPDSVTFNCLLED 409
P LI GL R R+ VE A L+ + K G LPD+VT+ L
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIG 587
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC +G A ++ AS++G + D + Y L +G + + +L EM+ +G PD
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647
Query: 470 LATYNSYMDGLSNARK 485
A Y ++GL +K
Sbjct: 648 AAAYCCIINGLIKVKK 663
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 206/455 (45%), Gaps = 24/455 (5%)
Query: 38 TLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFA 97
T+ V L ++ H +R ++L P + Q+ S + L+S + T F
Sbjct: 57 TIKDVRLDGSSWSVHNIR----NVLGPVHGQVLGSHVAAVLRS-----LKVTGTAISFFR 107
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSV-LNFISANPCPCSNDGIFSCPEMERI 156
WA F+HD T+ ++ L + +S+ +++ + A P FS
Sbjct: 108 WAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAP----NTFS------- 156
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG-FYDR 215
F+ + +F + R +D + FE M++ +P + + +L++ K +KA F++
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEM 215
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD ++ + K+ A +F +M + G P+ +++NT+I G
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + M+ C + VT ILV+ LC G + +A EL + G P Y
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ G A + DE+ + G P VI T +I+GL + +A+ E+M++ G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ VT+ +++ L +GR +A R+ G PD +TY L+ G+ + R E
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
L++E+ P+L Y+S ++GL + SV +T
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDG-GSVEKT 489
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 160/338 (47%), Gaps = 9/338 (2%)
Query: 154 ERIFHFA-VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALG 211
+R H A V +KA R+ + F M K G P +I YN +I+G K +AL
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKC--GFPPDAIAYNTMIDGLAKAGHAQEALK 281
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
D M+ P VT+ IL++ C+ + A LFR M G PN V + +LI GF
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ E ++ EM+E G +T +++DGLC G +A + + R G P
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +++ L G A ++ + G P + L++G +L + EA+ L++++
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Query: 392 LKEGILPDSVTFNCLLEDLCDVG---RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
K P+ ++ L+ LCD G +T+D + A+ + LDP G+ I+V G +
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDP-GLCCSIIV-GLCKT 519
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
R E + M+ EG PD TYN ++GL +R++
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSREN 557
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 132/294 (44%), Gaps = 3/294 (1%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK--KFDLALGLFREMRE 253
+I G K D+A + RMV + KPD T+NILI+G CR++ + + A L ++ +
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK 571
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P+ V++ L G + D V M E G V L GLC +G+V +
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A L + R+G P Y ++ L A + DE+ KG P+V T L++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSV-TFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L EA E ML G L SV ++ L+ C + A +L ++G
Sbjct: 692 ALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
P +T L G R + ++ + L+ EM G P AT+ + +DGL + +S
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDES 805
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 6/304 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE--FDKALGFYDRMV 217
+ K R+++ F+ R + +G +P + YN+LING + RE ++A +
Sbjct: 513 IVGLCKTGRLDEACRIFQ--RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD VT+ L G C+ + D A+ + E +G N +VV++ L G + + D
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
V++ EM+ G + +++GL ++ AC+ + +G P Y LV
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 338 EKLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC GN A + + +G L SV+ LI G + K A L E M+ G
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P +VT L + L G+T A L + G P T+ ++ G + + +
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810
Query: 457 LVNE 460
LV E
Sbjct: 811 LVQE 814
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + F M K RP S+ +N L++ VK +++D + +M ++ D+
Sbjct: 65 KLNDAIDLFSDMVK---SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFNI+I+ FC + LAL + +M + G P+ V+ +L+ GF + + V++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+G + V ++D LC RV A + + R+G+ P Y LV LC
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ ++ KK P+VI + L++ + K +EA L E+M++ I PD VT++ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC R +A+++ L +KG D ++Y+ L++G+ + R ++G L EM G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 467 IPDLATYNSYMDGLSNA 483
+ + TYN+ + G A
Sbjct: 362 VSNTVTYNTLIQGFFQA 378
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN F + NR++D + + M + I +P + YN +I+ K + + A F+ + R
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+VVT+ L++G C + ++ A L +M +K PNV++++ L+ F K E
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + + VT L++GLC R+ +A ++ +G L Y L+
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +++ E+ ++G + + + TLI+G + +A +M GI PD
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL LCD G A + + +D D +TY ++ G + + +E +L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G PD+ TY + M GL
Sbjct: 461 LSLKGLKPDIVTYTTMMSGL 480
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 7/332 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F +++ L M KL P L+NGF + A+ D+M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD+V +N +I C+ K+ + A F+E+ KG PNVV++ L+ G ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +MI+ + +T L+D G+VL+A EL + R + P Y L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ D + KG L V++ TLI G + ++ + L +M + G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK---GLDPDGMTYHILVSGYTRENRRKE 453
+ ++VT+N L++ G D D+ + S G+ PD TY+IL+ G ++
Sbjct: 362 VSNTVTYNTLIQGFFQAG---DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M D+ TY + + G+ K
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ K R+ND F E RK I RP+V Y L+NG + A
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ P+V+T++ L+ F +N K A LF EM +P++V++++LI G +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE M M+ GC V+ L++G C RV +L + S+RG++ Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G+ A E ++ G P + L+ GL + +A + E M K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D VT+ ++ +C G+ +A L S KGL PD +TY ++SG + E E
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 456 NLVNEMLDEGFIPDLAT 472
L +M EG + + T
Sbjct: 491 ALYTKMKQEGLMKNDCT 507
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 11/311 (3%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN ++R +D L + ++K I P+V Y+ L++ FVK + +A ++ MVR
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKI--TPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD+VT++ LI+G C + + D A +F M KGC +VVS+NTLI GF ++ ++G
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM + G ++VT L+ G G V KA E G+ P + Y L+
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G AL + +++ K+ ++ TT+I G+ + K EA L + +G+ PD
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+ ++ LC G + + L +GL + T + L+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIK 521
Query: 460 EMLDEGFIPDL 470
+ML G+ P L
Sbjct: 522 KMLSCGYAPSL 532
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 170/326 (52%), Gaps = 11/326 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + A KA M+ A E + ++ P+ YN +++G+ + +KA+G + +M
Sbjct: 49 YNSIIAALSKAQAMDR---AMEVLTVMV--MPNCFTYNSIMHGYCSSGQSEKAIGIFRKM 103
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D ++PDVVT+N L+ C+N K A +F M ++G P++ ++ TL+ G+ +
Sbjct: 104 CSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGAL 163
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR---RGVLPKDFDY 333
E ++ M++ G + IL+ C + K E+V+ FS+ +G+ P +Y
Sbjct: 164 VEMHDLLALMVQNGMQLDHHVFNILI---CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNY 220
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ LC G A+ +++ KG P+V+ T+LI L K +A L+ ++L
Sbjct: 221 RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD 280
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI P+ V FN +L+ LC GR +++ +L L G++PD +TY L+ GY +
Sbjct: 281 QGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDG 340
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
L+ M+ G PD TY++ ++G
Sbjct: 341 AMKLLTGMVSVGLKPDSVTYSTLING 366
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 6/300 (2%)
Query: 181 RKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
RK+ D +P ++ Y L++G+ + MV++ ++ D FNILI
Sbjct: 132 RKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICA 191
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+ + +K D + +F +MR++G PN V++ T+I G + D+ + +MI+ G +
Sbjct: 192 YTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPN 251
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
V L+ LC + KA EL+ + +G+ P + +++ LC EG + ++ D
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD 311
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
L G P VI +TLI+G K A L+ M+ G+ PDSVT++ L+ C +
Sbjct: 312 LLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKIN 371
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R DA L + G++PD +TY+I++ G R R + L + + G +L+TYN
Sbjct: 372 RMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 48/343 (13%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TT+ ++ AS E+H +L + N + +F+ + A+ K
Sbjct: 146 DITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH----------HVFNILICAYTKQ 195
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++++ +L F MR+ G P+ Y +I+G K D A+ +++M+ + P+VV
Sbjct: 196 EKVDEVVLVFSKMRQ--QGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVV 253
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+ LI C K++ A L E+ ++G NPN+V FNT++
Sbjct: 254 VYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTIL------------------- 294
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
D LC EGRV+++ +L GV P Y L++ C G
Sbjct: 295 ----------------DSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKM 338
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A++++ + G P + +TLI G ++ + +A L ++M G+ PD +T+N +
Sbjct: 339 DGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNII 398
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
L L RT A L + G + TY+I++ + + N
Sbjct: 399 LHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTN 441
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 4/225 (1%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C P+VVS+NT+I G F E D+ +EM++ +VT ++ L + +A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
E++ V+P F Y ++ C G + A+ + ++ G P V+ +L++ L
Sbjct: 67 EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ K EA + + M+K G+ PD T+ LL G V+ L L G+ D
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++IL+ YT++ + E + ++M +G P+ Y + +DGL
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGL 227
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y +++ L EG+ A E+ + P + ++I L + + A +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M ++P+ T+N ++ C G++ A + + G++PD +TY+ L+ +
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ E + + M+ G PD+ TY + + G ++
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYAS 159
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N + K NRM D L F+ M +G P + YN++++G + R A Y R+
Sbjct: 364 INGYCKINRMEDALALFKEMES--NGVNPDIITYNIILHGLFRTRRTAAAKELYARITES 421
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ ++ T+NI++ F + + G FR
Sbjct: 422 GTQLELSTYNIILMDFAKTNSLMMHFGCFR 451
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 165/357 (46%), Gaps = 33/357 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGF---------------V 201
F+ +N K ++ F + + +P++ YN L+ G+ +
Sbjct: 229 FNIMINVLCKEGKLKKAK-GFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEM 287
Query: 202 KCREFDKALGFYD-------------RMVRDR----VKPDVVTFNILISGFCRNKKFDLA 244
K + F L Y+ ++R+ + PD V++NILI G N + A
Sbjct: 288 KSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETA 347
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
EM ++G P ++NTLI G F E K + + E+ E G SVT I+++G
Sbjct: 348 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVING 407
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G KA L + G+ P F Y L+ LC A E+ +++ KG P
Sbjct: 408 YCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPD 467
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ TL++G A L+++M + I PD VT+NCL+ LC G+ +A L
Sbjct: 468 LVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMG 527
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+G+ PD ++Y+ L+SGY+++ K + +EML GF P L TYN+ + GLS
Sbjct: 528 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS 584
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 41/366 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+F F V + + +++ + F M+ K D P N +++ + + A FY
Sbjct: 158 LFDFMVRFYCQLRMVDEAIECFYLMKEKGFD--PKTETCNHILSLLSRLNRIENAWVFYA 215
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R +K +V TFNI+I+ C+ K A G M G P +V++NTL++G+
Sbjct: 216 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRG 275
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + EM G + T ++ +CNEGR A E++ + G++P Y
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYN 332
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ G+ A DE+ K+G +P+ TLI GL K A L+ ++ ++
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI+ DSVT+N ++ C G A L T G+ P TY L+ R N+ +E
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452
Query: 455 ENLVNEMLDEGFIPDLA-----------------------------------TYNSYMDG 479
+ L +++ +G PDL TYN M G
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512
Query: 480 LSNARK 485
L K
Sbjct: 513 LCGEGK 518
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 2/310 (0%)
Query: 176 AFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E +R++ I P YN+LI G + + A + D MV+ + P T+N LI
Sbjct: 312 ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIH 371
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G K + A L RE+REKG + V++N +I G+ + + EM+ G +
Sbjct: 372 GLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKP 431
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T L+ LC + +A EL +G+ P L++ C GN A ++
Sbjct: 432 TQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLL 491
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ + P + L+ GL K EA LM +M + GI PD +++N L+
Sbjct: 492 KEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 551
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G T A +R + G +P +TY+ L+ G ++ + E L+ EM EG +P+ +++
Sbjct: 552 GDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSF 611
Query: 474 NSYMDGLSNA 483
S ++ +S +
Sbjct: 612 CSVIEAMSKS 621
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ + F+ ++R + R DE + Y M E G + + TC ++ L R+ A
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
D R + + + ++ LC EG A + + G P+++ TL++G L
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYS-L 273
Query: 379 RKGVE-ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
R +E A ++ +M +G PD T+N +L +C+ GR ++ LR + GL PD ++
Sbjct: 274 RGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRA--SEVLREMKGI-GLVPDSVS 330
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+IL+ G + + +EM+ +G +P TYN+ + GL
Sbjct: 331 YNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 145/293 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN LING C K D+M VKP+ VT+N+++ + + K D A
Sbjct: 350 PDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 409
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E G +P+ V+FNTLI G+ + E M EM G + +SVT ++ LC
Sbjct: 410 LRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 469
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E ++ A +L+ S+RG + Y L+ +G + A+++ DE+ +K +PS+I
Sbjct: 470 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIIT 529
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I GL K ++ + ++L+ G++PD T+N ++ C G+ A +
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K PD T +IL+ G E + L N + +G D TYN+ + GL
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 148/297 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YNV++ +VK + D A +M PD VTFN LI+G+C+ + A
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR 443
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ EM KG N V+ NT++ GERK D+ + + G V+ L+ G
Sbjct: 444 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 503
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G+ ++A +L + + ++P Y ++ LC G +++ ++EL + G +P
Sbjct: 504 KDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDET 563
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+I G R + +A KM+K+ PD T N LL LC G A +L
Sbjct: 564 TYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTW 623
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+KG D +TY+ ++SG +E+R +E +L+ EM ++ PD TYN+ + L++A
Sbjct: 624 ISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADA 680
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 186/375 (49%), Gaps = 16/375 (4%)
Query: 123 YRFSELHSVLN-FISANPCPCSNDGIFSCP-----EMERIFHFAVNAFVKANRMNDGLLA 176
++FS+ S+L FISA+ + + P + I ++ A+V NR +
Sbjct: 102 HKFSDAKSLLTAFISADRTHLLHHHLLHSPFKKVQSLRVILDTSIGAYVACNRPHHAAQI 161
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVK-----CREFDKALGFYDRMVRDRVKPDVVTFNIL 231
F M++L +P++ N LIN V+ KA+ + +++ VK + TFNIL
Sbjct: 162 FNRMKRL-HLKPNLLTCNTLINALVRYPSKPSVYLSKAI--FSDVIKLGVKVNTNTFNIL 218
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G C K A+GL +M++ C P+ VS+NT++ + K +E ++ +M G
Sbjct: 219 IYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGL 278
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ T ILV G C G + +A +++ ++ VLP + Y L+ LC +G A
Sbjct: 279 LPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFR 338
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ DE+ LP V+ TLI G ++ L++KM +G+ P++VT+N +++
Sbjct: 339 LKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYV 398
Query: 412 DVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
G+ +A + LR + + G PD +T++ L++GY + R E +++EM +G +
Sbjct: 399 KEGKMDNAGNELRKMEES-GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457
Query: 471 ATYNSYMDGLSNARK 485
T N+ + L RK
Sbjct: 458 VTLNTILHTLCGERK 472
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 11/337 (3%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-----PSVSIYNVLINGFVK 202
FSC ++ ++ K ++N EA L+D + P+ + +N+L++G+ K
Sbjct: 241 FSCFPDNVSYNTILDVLCKKGKLN------EARDLLLDMKNNGLLPNRNTFNILVSGYCK 294
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+A D M ++ V PDV T+N+LI G C++ K D A L EM P+VV+
Sbjct: 295 LGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVT 354
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTLI G F +G + +M G + ++VT ++V EG++ A +
Sbjct: 355 YNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME 414
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G P + L+ C G A ++DE+ +KG + + T++ L RK
Sbjct: 415 ESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLD 474
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A L+ K G D V++ L+ G++V+A +L K + P +TY+ ++
Sbjct: 475 DAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMI 534
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G + + + +NE+L+ G +PD TYN+ + G
Sbjct: 535 GGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 169/394 (42%), Gaps = 63/394 (15%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V +VK +M++ A +RK+ + P +N LING+ K +A D
Sbjct: 390 YNVVVKWYVKEGKMDN---AGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMD 446
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFD-----------------------LALGLFR-- 249
M R +K + VT N ++ C +K D L +G F+
Sbjct: 447 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDG 506
Query: 250 ----------EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
EM+EK P+++++NT+I G K D+ ++ E++E G T
Sbjct: 507 KSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYN 566
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++ G C EG+V KA + ++ P F L+ LC EG AL++ + K
Sbjct: 567 TIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISK 626
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G + T+I GL + + EA L+ +M ++ + PD T+N +L L D GR +A
Sbjct: 627 GKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEA 686
Query: 420 DRL--------RLLASTKGL---------------DPDGMTYHILVSGYTRENRRKEGEN 456
+ +L T L DP+ +T+ ++ + + K+ +
Sbjct: 687 EEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMH 746
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+V E +G +TY S M+GL RKS+ ++
Sbjct: 747 MVQESTQKGITLHKSTYISLMEGLIKRRKSISRS 780
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 6/302 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +++ K + ++A M + + P+ TFNIL+SG+C+ A +
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQV 304
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + P+V ++N LI G + K DE + EM L VT L++G +
Sbjct: 305 IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFD 364
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG---NAGIALEVVDELWKKGNLPS 364
LK EL+ +GV P Y +V+ EG NAG L ++E G P
Sbjct: 365 CSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE---SGFSPD 421
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ TLI G + + EA +M++M ++G+ +SVT N +L LC + DA +L
Sbjct: 422 CVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLS 481
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
AS +G D ++Y L+ GY ++ + E L +EM ++ IP + TYN+ + GL ++
Sbjct: 482 SASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSG 541
Query: 485 KS 486
K+
Sbjct: 542 KT 543
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 67/297 (22%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
I + I +V C A ++RM R +KP+++T N LI+ R
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPS----------- 189
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
P+V L + F + +I+LG + ++ T IL+ G C E ++
Sbjct: 190 -----KPSVY----LSKAIFSD------------VIKLGVKVNTNTFNILIYGCCIENKL 228
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A L+ P + Y +++ LC KKG L
Sbjct: 229 SEAIGLIGKMKDFSCFPDNVSYNTILDVLC----------------KKGKLN-------- 264
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
EA L+ M G+LP+ TFN L+ C +G +A ++ L + +
Sbjct: 265 -----------EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
PD TY++L+ G ++ + E L +EM + +PD+ TYN+ ++G + S++
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLK 370
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 192/386 (49%), Gaps = 26/386 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSE---LHS--VLNFISANPCPCSN--DGIFSCPEMERIFHFA 160
+H ++ I+ SL S R E L S V+ IS + C+ DG+F
Sbjct: 390 NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF------------ 437
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
K + + FE + KL + P+ Y+ L++G+ K + + A +M ++
Sbjct: 438 -----KVGKTKEAEEVFETILKL-NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+V+TF+ +I+G+ + A+ + REM ++ PN + + LI G+F + D
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVAD 551
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E S+V +IL++ L GR+ +A L+ID +G+ P +Y L++
Sbjct: 552 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EGN AL +V E+ +K V+A LI+GL RL K + + +M++ G+ PD
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDC 670
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+N ++ C G+T DA + + G+ P+ +TY+IL+ G + ++ E+ ++E
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDE 730
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKS 486
ML F+P T+ + S + K+
Sbjct: 731 MLVMEFVPTPITHKFLVKAYSRSEKA 756
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 149/293 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y LI + K +++ Y +M+ + + PDVVT + ++ GFCR+ K A
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LFREM E G +PN VS+ T+I F + E N+ +M+ G F VTC ++DGL
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ +A E+ + + P Y L++ C G +A V+ ++ K+ P+VI
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+++I G + +A ++ +M++ ++P+++ + L++ G AD
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ L+ + + IL++ R R E +L+ +M +G PD+ Y S +DG
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 25/320 (7%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V NVL++ K + D ALG+ D V D VT+N +I GFC+ D GL
Sbjct: 127 PDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184
Query: 248 FREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
EM ++G + ++ N L++G+ G ++ E V Y +++ G + L+DG
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWV--MYNLVDGGVTKDVIGLNTLIDGY 242
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL---WK---- 358
C G + +A EL+ + R V Y L++ C G+ A + +E+ WK
Sbjct: 243 CEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302
Query: 359 ------------KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
K P+++ TTLI + E+ L +KM+ GI+PD VT + +
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSI 362
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C G+ +A L GLDP+ ++Y +++ + R E NL ++M+ G
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422
Query: 467 IPDLATYNSYMDGLSNARKS 486
D+ T + MDGL K+
Sbjct: 423 SFDIVTCTTVMDGLFKVGKT 442
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 23/334 (6%)
Query: 173 GLLAFE--AMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
GL+ + M L+DG + + N LI+G+ + +A + R VK D+VT+
Sbjct: 211 GLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTY 270
Query: 229 NILISGFCRNKKFDLALGLFREM-------------------REKGCNPNVVSFNTLIRG 269
N L+ FC+ A LF E+ K P +V++ TLI
Sbjct: 271 NTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAA 330
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ +E ++ +MI G VTC ++ G C G++ +A L + G+ P
Sbjct: 331 YCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPN 390
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ L G A + ++ +G ++ CTT+++GL ++ K EA + E
Sbjct: 391 HVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+LK + P+ VT++ LL+ C +G+ A+ + + + P+ +T+ +++GY ++
Sbjct: 451 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +++ EM+ +P+ Y +DG A
Sbjct: 511 MLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 164/386 (42%), Gaps = 51/386 (13%)
Query: 150 CPEMER--------IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGF 200
C EM+ IF +N + RM++ L + K ID P + Y LI+G+
Sbjct: 554 CKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGID--PDIVNYASLIDGY 611
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K AL M ++ DVV +N LI G R K+D R M E G P+
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR-MIELGLAPDC 670
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE---- 316
+++NT+I + + K ++ +++ EM G ++VT IL+ GLC G V KA
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDE 730
Query: 317 ---------------LVIDFSRRGVLPKDFD----------------YFGLVEKLCGEGN 345
LV +SR K Y L+ C G
Sbjct: 731 MLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGM 790
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A V+DE+ K+G ++ LI G +A +M +GI P+ T+N
Sbjct: 791 TRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 850
Query: 406 LLEDLCDVG----RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
LL L + G + ++L + +GL P+ TY ILVSGY R RK+ L EM
Sbjct: 851 LLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEM 910
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSV 487
+ +GF+P L TYN + + + K +
Sbjct: 911 ITKGFVPTLKTYNVLISDYAKSGKMI 936
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 4/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +IN + + + AL + M + P+ VT+NILI G C+ + A
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESA 727
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM P ++ L++ + K D+ + + +++ G E S L+ C
Sbjct: 728 LDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCR 787
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G KA ++ + +RG+ Y L+ C + AL+ +++ G P++
Sbjct: 788 LGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITT 847
Query: 368 CTTLIEGLRR----LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
TL+ GL E L+ +M + G++P++ T++ L+ VG L
Sbjct: 848 YNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILH 907
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ TKG P TY++L+S Y + + E L+N++L +G IP+ TY+ G N
Sbjct: 908 IEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 966
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 205/471 (43%), Gaps = 63/471 (13%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
Q++P H + + H T F W S ++H+ F+ ++ L F+
Sbjct: 110 QLSPQLKAHHVAEIVAVHKD-TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAP 168
Query: 128 L-HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN--------AFVKANRMNDGLLAFE 178
H + I A C N+ E+ R+ F + N + L FE
Sbjct: 169 ADHIRILMIKA----CRNE-----EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFE 219
Query: 179 AM-------RKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ +++++ +PS+ +N LIN K + +A ++ + + PDV T+
Sbjct: 220 MVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYT 279
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI G CRN+ DLA G+F M ++GC+PN V+++TLI G E + DE ++M EMIE
Sbjct: 280 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 339
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E + T + + LC +A ELV +RG P Y L+ L G +A
Sbjct: 340 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 399
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGL----------------------------RRLRKG 381
+ + ++ K+G +P+ + LI L + KG
Sbjct: 400 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 459
Query: 382 V-------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ +A L EKMLK G LP VT+N L+ G +A RL L G +PD
Sbjct: 460 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 519
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ LVSG+++ + + EM++ G P+ +Y + +DG S K
Sbjct: 520 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 25/335 (7%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ ++ FE M K+ P+V YN LING++ + A D M + +PD T+N
Sbjct: 466 IEKAMVLFEKMLKM-GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 524
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+SGF + K + A F+EM E G NPN VS+ TLI G + K D +++ M E+
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC + + +++GL E R +A ++ + +G+LP Y L++ LC G A
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ ++ K+ LP++ ++LI GL + K EA L+++M ++G+ PD VTF L++
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE-------------- 455
+GR A L G P+ TY +L+ G +E E +
Sbjct: 705 FVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPH 764
Query: 456 ----------NLVNEMLDEGFIPDLATYNSYMDGL 480
NL+ M + G P L TY++ + GL
Sbjct: 765 EKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGL 799
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 35/328 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+V Y LI+G + + + A+G Y +M+++ + P+ VT+N LI+ C +F AL
Sbjct: 377 RPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALK 436
Query: 247 -----------------------------------LFREMREKGCNPNVVSFNTLIRGFF 271
LF +M + G P VV++NTLI G+
Sbjct: 437 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 496
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + M E GCE T LV G G++ A + G+ P
Sbjct: 497 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 556
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ +G IAL +++ + + G P+V + +I GL + + EA + +KM
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
++G+LP+ +T+ L++ LC GRT A ++ + P+ TY L+ G +E +
Sbjct: 617 AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG 479
E E L+ EM +G PD T+ S +DG
Sbjct: 677 DEAEILLKEMERKGLAPDEVTFTSLIDG 704
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFY 213
++ +N R + L F M +G S++ YN +I G + +KA+ +
Sbjct: 418 YNALINELCVGGRFSTALKIFHWM----EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 473
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M++ P VVT+N LI+G+ + A L M+E GC P+ ++N L+ GF
Sbjct: 474 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 533
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K + EM+E G + V+ L+DG +G+V A L+ G P Y
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ L E A ++ D++ ++G LP+VI TTLI+GL R + A + M K
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 653
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
LP+ T++ L+ LC G+ +A+ L KGL PD +T+ L+ G+ R
Sbjct: 654 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDH 713
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLS 481
L+ M+D G P+ TY+ + GL
Sbjct: 714 AFLLLRRMVDVGCKPNYRTYSVLLKGLQ 741
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 164/364 (45%), Gaps = 36/364 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ + L + + D P V Y LI G + R D A G +DRM
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQY-DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--------------------- 255
V++ P+ VT++ LI+G C + D AL + EM EKG
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361
Query: 256 --------------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
C PNV ++ LI G K + + + ++M++ G ++VT L
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++ LC GR A ++ G L Y +++ LC G+ A+ + +++ K G
Sbjct: 422 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
LP+V+ TLI G A+ L++ M + G PD T+N L+ G+ A
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
GL+P+ ++Y L+ G++++ + +L+ M + G P++ +YN+ ++GLS
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601
Query: 482 NARK 485
+
Sbjct: 602 KENR 605
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N R+++ L E M K I+ P+V Y + I ++A+ RM +
Sbjct: 317 INGLCNEGRVDEALDMLEEMIEKGIE--PTVYTYTLPITALCAIEHEEEAIELVARMKKR 374
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+P+V T+ LISG R K ++A+GL+ +M ++G PN V++N LI +F
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + + M G ++ T ++ GLC G + KA L + G LP Y L+
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+GN A ++D + + G P L+ G + K AS ++M++ G+ P+
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V++ L++ G+ A L G +P+ +Y+ +++G ++ENR E E + +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
+M ++G +P++ TY + +DGL
Sbjct: 615 KMAEQGLLPNVITYTTLIDGL 635
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 127/298 (42%), Gaps = 24/298 (8%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ Y+ LI G + + D+A M R + PD VTF LI GF + D A L
Sbjct: 658 PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL 717
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGE------------------------RKFDEGVNMA 283
R M + GC PN +++ L++G E F+ N+
Sbjct: 718 LRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLL 777
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M E+GCE + T LV GLC +GR +A +LV D RG P Y+ L+ C
Sbjct: 778 ARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKN 837
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
AL++ + KG + LI L + + EA L + ML++ D + +
Sbjct: 838 LEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVW 897
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
L++ L G +L + +K P+ TY IL +R + E E L +++
Sbjct: 898 TVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 14/325 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N K NR ++ + M + G P+V Y LI+G + A +
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAE--QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 650
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + + P++ T++ LI G C+ K D A L +EM KG P+ V+F +LI GF +
Sbjct: 651 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 710
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + M+++GC+ + T +L+ GL E +L+ V + P + D
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDV-- 768
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
N I ++ + + G P++ +TL+ GL R + EA L++ M + G
Sbjct: 769 ---------NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 819
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD + LL C A ++ KG Y L+ + + +E +
Sbjct: 820 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 879
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L + ML++ + D + +DGL
Sbjct: 880 ALFDNMLEKEWNADEIVWTVLVDGL 904
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 164/376 (43%), Gaps = 13/376 (3%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
TF ++ L + + HS+ + N C + V+ K ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTID----------IHTYTTIVDWLAKNKKI 50
Query: 171 NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + E + +G P+++ YN L+NG K ++A+ ++V + PDVVT+
Sbjct: 51 QEAVALMEKITA--NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 108
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI G + K+ A LF+EM +G + V + LIRG K + ++ M
Sbjct: 109 SLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ 168
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC VT ++DGLC GR+ A + RG+ P + Y L+ LC A
Sbjct: 169 GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 228
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
LE++ ++ K P I LI+GL + A ++ML+ G PD T+N L+
Sbjct: 229 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISG 288
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G T A + S+ P+ +TY L+SG + + + M + G PD
Sbjct: 289 FCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPD 348
Query: 470 LATYNSYMDGLSNARK 485
Y+S +DGL + K
Sbjct: 349 SFVYSSLVDGLCKSGK 364
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E ++ ++ KA +M+ L M+K P YN+LI+G K + A F+
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAF-CTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ KPDV T+NILISGFC+ D A G+F +M C+PNVV++ TLI G
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+ + M E GC S LVDGLC G++ C L + R GV
Sbjct: 328 RQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTR 386
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
L+ LC A+ + + + K+G +P A ++I L + K E + ++M
Sbjct: 387 TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 137/310 (44%), Gaps = 17/310 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D + ++R L + + + SV +++ C P++ + ++ KA
Sbjct: 138 DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV---------PDVVTLSTM-IDGLCKA 187
Query: 168 NRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
R+ + F++M R L P+ +Y+ LI+G K R+ D AL +M + PD
Sbjct: 188 GRIGAAVRIFKSMEARGL---APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
+T+NILI G C++ A F EM E GC P+V ++N LI GF D + +
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M C + VT L+ GLC ++ KA RG P F Y LV+ LC G
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+ DE+ + G S T LI L + + EA L + KEG +P +N
Sbjct: 365 LEGGCMLFDEMERSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS 422
Query: 406 LLEDLCDVGR 415
++ L G+
Sbjct: 423 IISALIKSGK 432
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%)
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+ LI GL + ++A L ++ G D T+ +++ L + +A L +
Sbjct: 3 SILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITA 62
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G P TY+ L++G + R +E +L+ +++D G PD+ TY S +DGL ++S
Sbjct: 63 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 1/323 (0%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+ K + + D FE M + R VS Y LI+GF + + D+AL + +M D
Sbjct: 234 GYCKIHELGDAYKVFEIMPQEGCLRNEVS-YTNLIHGFCEVGKIDEALELFFQMKEDGCF 292
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+ +L++ FC K AL F EM E G PNV ++ LI F K DEG+ M
Sbjct: 293 PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM 352
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+E G S V L+DG C G + A ++ V P Y L+ C
Sbjct: 353 LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCR 412
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+ + A+ +++++++ P+++ TLI GL + R A L M+K+G +PD T
Sbjct: 413 KKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRT 472
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
F ++ LC +G+ A ++ K + + Y L+ GY + + + L ML
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
EG P+ T+N +DGL K
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGK 555
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V AF + + + L FE M + +G P+V Y VLI+ F K + D+ + M+
Sbjct: 302 VAAFCEVGKETEALKFFEEMVE--NGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ VV FN LI G+C+ + A+ + M+ PN ++N LI GF ++ D
Sbjct: 360 GLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + +M E + VT L+ GLC V A L + G +P + ++
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A +V + L +K + T LI+G + K +A L ++ML EG P+
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
S+TFN LL+ L G+ DA L + P TY IL+ RE+ ++
Sbjct: 540 SITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599
Query: 460 EMLDEGFIPDLATYNSYMDG 479
+M+ G P++ TY +++
Sbjct: 600 QMISSGCQPNVVTYTAFIKA 619
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 159/359 (44%), Gaps = 32/359 (8%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFD 207
CP R ++ + F + M+ A + K+ + + P++ YN LI+G K R D
Sbjct: 397 CPN-SRTYNELICGFCRKKSMDR---AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A + M++D PD TF I C+ K + A +F ++EK N + LI
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G+ KF + + M+ GC +S+T +L+DGL EG+V A LV +
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK 572
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+E++ E + A +D++ G P+V+ T I+ R + +EA +
Sbjct: 573 PTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEM 632
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ K+ +EGIL DS ++ L+ +G+ A + + G +P TY IL+
Sbjct: 633 VVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIF 692
Query: 448 ENRRKEGEN--------------------------LVNEMLDEGFIPDLATYNSYMDGL 480
E KEG L +M+++G +P++ TY+ + GL
Sbjct: 693 EKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGL 751
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 218/500 (43%), Gaps = 39/500 (7%)
Query: 6 KKLPPILIHNKSPPP-------PPAPSIPLPSRPETPPVTLPSVTLTPT-----AHHTHL 53
K L +L HN++ P S+ S + P + ++ L P + +T +
Sbjct: 5 KPLFTLLHHNQNQNQNLFHLLLKPFSSLSPNSLQQDLPSQIFTILLQPQWRKNPSFNTLI 64
Query: 54 LRFLKTHLLTPTNN-QITPSSLLHFLKSKLHHHPQFTH--YDFHIFAWASTIDSF-RHDH 109
THL + NN + P + L+F K +H+ F H + + + + F R
Sbjct: 65 PSLTPTHLSSLFNNPNLHPLTALNFFKW-IHYQHGFIHTVHSYQPLLFILVRNGFLRAAE 123
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
+++S SS+ E VLN ++ ++ S R+F ++ F +
Sbjct: 124 NVRNSMIKSCVSSH---EARFVLNLLT------HHEFSLSVTSYNRLF-MVLSRFGLIDE 173
Query: 170 MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+N F+ M L DG P++ +N ++N K A ++ +++ D T+
Sbjct: 174 LN---CLFKDM--LNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTY 228
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
LI G+C+ + A +F M ++GC N VS+ LI GF K DE + + ++M E
Sbjct: 229 TSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKE 288
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC T +LV C G+ +A + + G+ P + Y L++ C G
Sbjct: 289 DGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDE 348
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
+E++ + +KG + SV+ LI+G + +A +++ M + P+S T+N E
Sbjct: 349 GMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN---E 405
Query: 409 DLCDVGRTVDADRLRLLAST---KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+C R DR L + L P+ +TY+ L+ G + L + M+ +G
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 466 FIPDLATYNSYMDGLSNARK 485
F+PD T+ +++D L K
Sbjct: 466 FVPDQRTFCAFIDCLCKMGK 485
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 151/353 (42%), Gaps = 27/353 (7%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+R F ++ K ++ FE++++ + +Y LI+G+ K +F A +
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKE-KHAEANEFLYTALIDGYCKAEKFSDAHLLF 528
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
RM+ + P+ +TFN+L+ G + K + A+ L M + P V ++ LI E
Sbjct: 529 KRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRE 588
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
FD +MI GC+ + VT + C +GR+L+A E+V+ G+L F Y
Sbjct: 589 SDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIY 648
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL------ 387
LV G A V+ ++ G PS + L++ L + E GL
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTN 708
Query: 388 --------------------MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
EKM+++G +P+ T++ L++ LC V A RL
Sbjct: 709 ISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G+ P ++ L+S + +E L++ M++ + L +Y + GL
Sbjct: 769 ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL 821
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 128/335 (38%), Gaps = 62/335 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K ++ D + + M K D +P+V Y +LI ++ +FD+A F D+M
Sbjct: 543 FNVLLDGLRKEGKVEDAMSLVDVMGKF-DAKPTVHTYTILIEEILRESDFDRANMFLDQM 601
Query: 217 VRDRVKPDVVTFNILISGFCRNKKF----------------------------------- 241
+ +P+VVT+ I +CR +
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG---------------------- 279
D A G+ M + GC P+ +++ L++ E+ EG
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIAD 721
Query: 280 ---VNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ M +E M+E GC + T L+ GLC + A L G+ P + +
Sbjct: 722 FEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS 781
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C G AL ++D + + +L + + L+ GL +A + +L G
Sbjct: 782 LLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCG 841
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
D V + LL+ L G + +LR + G
Sbjct: 842 YNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 101/277 (36%), Gaps = 29/277 (10%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSV---SIYNVLINGFVKCREFDKALGFYDRMVRD 219
AF+KA LL E M I + IY+VL+N + + D A G RM
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT 674
Query: 220 RVKPDVVTFNILISGFCRNK--------------------------KFDLALGLFREMRE 253
+P T++IL+ K F++ LF +M E
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVE 734
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+GC PNV +++ LI+G + M E G S L+ C G +
Sbjct: 735 QGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEE 794
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A L+ L Y LV L +GN A E+ L G + L++
Sbjct: 795 ALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLD 854
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
GL R E S L + M K G S T L ++L
Sbjct: 855 GLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQEL 891
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 164/326 (50%), Gaps = 1/326 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +N+ K ++ L + M L++ RP+ Y++LI+ F + D A+ ++DR
Sbjct: 367 VYNALINSLCKGGDLDKAELLYSNM-SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDR 425
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++D + V +N LI+G C+ A LF EM KG P +F +LI G+ + +
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQ 485
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + +MI+ G + T L+ GLC+ ++ +A EL + R + P + Y
Sbjct: 486 VQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV 545
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+E C +G A E+++++ +KG +P LI GL + +A ++ + K+
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ + + ++ LL C GR ++A +G++ D + + +L+ G ++ RK
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFF 665
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLS 481
+L+ +M D+G PD Y S +D S
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYS 691
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 195/426 (45%), Gaps = 47/426 (11%)
Query: 104 SFRHDHTTFLFIVRSLASSYRF----SELHSVLNFISANPCPCSN--DGIFSCPEMERI- 156
+ H T++ +V +L S F S LH++L S C S+ D C +
Sbjct: 98 NMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLG 157
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ V +V ++R+ D ++ + M L+ P V + L+NG +K R+F +D
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLL---PEVRTLSALLNGLLKVRKFITVWELFD 214
Query: 215 RMVRDRVKPD-----------------------------------VVTFNILISGFCRNK 239
V V+PD +VT+N+LI G C+
Sbjct: 215 ESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGD 274
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ A+ + R + KG +VV++ TL+ GF ++F+ G+ + EM+ELG +
Sbjct: 275 RVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS 334
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
LVDGL +G++ A ELV+ R G +P F Y L+ LC G+ A + +
Sbjct: 335 GLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
P+ I + LI+ R + A ++M+++GI +N L+ C G A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + + KG++P T+ L+SGY ++ + ++ L N+M+D G P++ T+ + + G
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514
Query: 480 LSNARK 485
L + K
Sbjct: 515 LCSTNK 520
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 5/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +++F ++ R++ + F+ R + DG +V YN LING K + A +
Sbjct: 403 YSILIDSFCRSGRLDVAISYFD--RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIE 460
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V+P TF LISG+C++ + A L+ +M + G PNV +F LI G K
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + E++E + + VT +L++G C +G++ KA EL+ D ++G++P + Y
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G A + +D+L K+ + + + L+ G + + +EA +M++ G
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640
Query: 396 ILPDSVTFNCLLED-LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D V L++ L R D L+ + +GL PD + Y ++ Y++E K+
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHD-QGLRPDNVIYTSMIDTYSKEGSFKKA 699
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ M+ E P++ TY + M+GL A
Sbjct: 700 FECWDLMVTEECFPNVVTYTALMNGLCKA 728
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 158/337 (46%), Gaps = 38/337 (11%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ K+ID P+V + LI+G + +A +D +V ++KP VT+N+LI
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIE 548
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+CR+ K D A L +M +KG P+ ++ LI G + + + ++ + +
Sbjct: 549 GYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKL 608
Query: 294 SSVTCEILVDGLCNEGRVLKA----CELVI------------------------------ 319
+ + L+ G C EGR+++A CE++
Sbjct: 609 NEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLL 668
Query: 320 -DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
D +G+ P + Y +++ EG+ A E D + + P+V+ T L+ GL +
Sbjct: 669 KDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKA 728
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ A L ++M + P+S+T+ C L++L G +A L A KGL + +T+
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLH-HAMLKGLLANTVTH 787
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+I++ G+ + R E +++EM + G PD TY++
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYST 824
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 44/323 (13%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR----PSVSIYNVLINGFVKCREFDKALGFYDRM 216
V+ K +++D A+E + K+ GR P++ +YN LIN K + DKA Y M
Sbjct: 337 VDGLRKQGKIDD---AYELVVKV--GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNM 391
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++P+ +T++ILI FCR+ + D+A+ F M + G V ++N+LI
Sbjct: 392 SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLI--------- 442
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+G C G + A L I+ + +GV P + L
Sbjct: 443 --------------------------NGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSL 476
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + A ++ +++ G P+V T LI GL K EAS L +++++ I
Sbjct: 477 ISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKI 536
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P VT+N L+E C G+ A L KGL PD TY L+SG R + ++
Sbjct: 537 KPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKD 596
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
++++ + + Y++ + G
Sbjct: 597 FIDDLHKQNVKLNEMCYSALLHG 619
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 35/327 (10%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ YNVLI+G K +A+ + + DVVT+ L+ GFCR ++F+ + L
Sbjct: 259 SIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLM 318
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM E G +P + + L+ G + K D+ + ++ G + L++ LC
Sbjct: 319 DEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKG 378
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + KA L + S + P Y L++ C G +A+ D + + G +V A
Sbjct: 379 GDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438
Query: 369 TTLIEG--------------LRRLRKGVE---------------------ASGLMEKMLK 393
+LI G + KGVE A L KM+
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
GI P+ TF L+ LC + +A L + + P +TY++L+ GY R+ + +
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ +M +G +PD TY + GL
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGL 585
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP IY +I+ + K F KA +D MV + P+VVT+ L++G C+ + D A
Sbjct: 677 RPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGL 736
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+ M+ PN +++ + E E + + + M++ G ++VT I++ G C
Sbjct: 737 LFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFC 795
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR +A +++ + + G+ P Y L+ + C GN G ++++ D + +G P ++
Sbjct: 796 KLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLV 855
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
A LI G + +A L + ML+ GI+PD+
Sbjct: 856 AYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN 889
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+ L++G+ + +AL M++ + D+V +LI G + L ++M
Sbjct: 613 YSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMH 672
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ V + ++I + E F + M+ C + VT L++GLC G +
Sbjct: 673 DQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMD 732
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L V P Y ++ L EGN A+ + + K G L + + +I
Sbjct: 733 RAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIII 791
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + EA+ ++ +M + GI PD VT++ L+ + C G + +L +GL+
Sbjct: 792 RGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLE 851
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
PD + Y++L+ G + L ++ML G IPD
Sbjct: 852 PDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N KA M+ L F+ M+ + P+ Y ++ K +A+G + M++
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQA-ANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGL 780
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + VT NI+I GFC+ +F A + EM E G P+ V+++TLI + V
Sbjct: 781 L-ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ M+ G E V +L+ G C G + KA EL D RRG++P +
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN 889
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 147/311 (47%), Gaps = 1/311 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ VN K R+++ + +M +P+V +N+++ + A M
Sbjct: 54 YNVLVNGMCKEGRLDEAIKFLNSMPSY-GSQPNVITHNIILRSMCSTGRWMDAEKLLTEM 112
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR P VVTFNILI+ CR A+ + +M GC PN +S+N L+ GF E+K
Sbjct: 113 VRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKM 172
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + M+ GC VT ++ LC +G+V A EL+ S +G P Y +
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTV 232
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L G A+E++ E+ KG P VI ++LI GL R K EA + G+
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGV 292
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P++ T+N ++ LC +T A +KG P ++Y IL+ G E KE
Sbjct: 293 KPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALE 352
Query: 457 LVNEMLDEGFI 467
L+NE+ G +
Sbjct: 353 LLNELCSRGVV 363
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 142/272 (52%)
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
DR + PDV+T+ ILI C A+ L EM +GC P+VV++N L+ G E
Sbjct: 5 DRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKE 64
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE + M G + + +T I++ +C+ GR + A +L+ + R+G P +
Sbjct: 65 GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTF 124
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC +G G A+++++++ G P+ ++ L+ G + +K A +E M+
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVS 184
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD VT+N +L LC G+ A L S+KG P +TY+ ++ G ++ + +
Sbjct: 185 RGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ 244
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM +G PD+ TY+S + GLS K
Sbjct: 245 AVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI +A+ D M KPDVVT+N+L++G C+ + D A+
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G PNV++ N ++R ++ + + EM+ GC S VT IL++ LC
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A +++ G P Y L+ C E A++ ++ + +G P ++
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T++ L + K A L+ ++ +G P +T+N +++ L VG+T A L
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KGL PD +TY L++G +RE + +E +++ G P+ TYNS M GL A+++
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313
Query: 488 R 488
R
Sbjct: 314 R 314
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 153/296 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YNVL+NG K D+A+ F + M +P+V+T NI++ C ++ A
Sbjct: 48 KPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEK 107
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM KGC+P+VV+FN LI + +++ +M GC +S++ L+ G C
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFC 167
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E ++ +A + + RG P Y ++ LC +G A+E++++L KG P +I
Sbjct: 168 KEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+I+GL ++ K +A L+ +M +G+ PD +T++ L+ L G+ +A +
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G+ P+ TY+ ++ G + + + + M+ +G P +Y ++G++N
Sbjct: 288 EGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 11/287 (3%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
I+RS+ S+ R+ + +L + C P + F+ +N + +
Sbjct: 91 IILRSMCSTGRWMDAEKLLTEMVRKGCS---------PSV-VTFNILINFLCRKGLLGRA 140
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ E M P+ YN L++GF K ++ D+A+ + + MV PD+VT+N +++
Sbjct: 141 IDILEKMPTH-GCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLT 199
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C++ K D A+ L ++ KGC+P ++++NT+I G K D+ V + +EM G +
Sbjct: 200 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKP 259
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+T L+ GL EG+V +A + D GV P F Y ++ LC A++ +
Sbjct: 260 DVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFL 319
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ KG P+ ++ T LIEG+ EA L+ ++ G++ S
Sbjct: 320 AYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKS 366
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
EK C P+V+++ LI E + + + EM GC+ VT +LV+G+C EGR+
Sbjct: 9 EKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLD 68
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + + G P + ++ +C G A +++ E+ +KG PSV+ LI
Sbjct: 69 EAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILI 128
Query: 373 EGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L RKG+ A ++EKM G P+S+++N LL C + A + + ++G
Sbjct: 129 NFL--CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
PD +TY+ +++ ++ + L+N++ +G P L TYN+ +DGLS K+
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+EV+D +K P VI T LIE +A L+++M G PD VT+N L+
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+C GR +A + + G P+ +T++I++ R + E L+ EM+ +G P
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 470 LATYN 474
+ T+N
Sbjct: 121 VVTFN 125
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 25/253 (9%)
Query: 53 LLRFLKTHLLTPTNNQITPSSLLH-FLKSK-LHHHPQFTHYDFHIFAWASTIDSFRHDHT 110
+L + TH TP N ++ + LLH F K K + Q+ + D
Sbjct: 143 ILEKMPTHGCTP--NSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP--------DIV 192
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ +L + +LN +S+ C + ++ ++ K +
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSK----------GCSPVLITYNTVIDGLSKVGKT 242
Query: 171 NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + MR G +P V Y+ LI G + + ++A+ F+ + VKP+ T+N
Sbjct: 243 DQAVELLHEMRG--KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
++ G C+ ++ D A+ M KGC P VS+ LI G E E + + E+
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360
Query: 290 GCEFSSVTCEILV 302
G S +++V
Sbjct: 361 GVVKKSSAEQVVV 373
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 177/403 (43%), Gaps = 18/403 (4%)
Query: 78 LKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISA 137
LK H H ++ F + SF+H T+ ++ LAS + +L +
Sbjct: 47 LKRLKHEHDITLALEY--FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKL 104
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLI 197
CS D +F + ++ +A L F M+ +P+V IYN ++
Sbjct: 105 EGISCSED----------LFISVIGSYRRAGSSEQALKTFYRMQDF-RVKPTVKIYNHIL 153
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+ + F Y M +D ++P+V T+NIL+ C+N + D A L EM KGC+
Sbjct: 154 DALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCD 213
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P+ VS+ TLI K E +A S L++G+C E +A +L
Sbjct: 214 PDEVSYTTLISSLCKLGKVKEARELAMSFTP-----SVPVYNALINGVCKEYTFEEAFQL 268
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + +G+ P Y ++ L GN ++L V+ +++ +G P++ T+LI+G
Sbjct: 269 LDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFL 328
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
EA ++M++EG++P+ V +N L+ LC DA + G P+ T
Sbjct: 329 KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRT 388
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y L+ GY + + N M+ G P++ Y +D L
Sbjct: 389 YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ + LI GF +AL F+DRM+R+ V P+VV +N L+ G C + A+ +
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M GC PNV +++ LI G+ D + MI GC + V +VD LC
Sbjct: 374 FNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR 433
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+A L+ + P + ++ LCG G A++V D++ G P+
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + R+ EA GL++ M GI + VT+N ++ C G +A L
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G PD +T +I++ Y ++ + L++ + + PD+ Y S + G+
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 172/369 (46%), Gaps = 16/369 (4%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++++L + R H +L +S+ C P+ E + +++ K ++
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCD---------PD-EVSYTTLISSLCKLGKV 232
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
EA + PSV +YN LING K F++A D M+ + P+V+++
Sbjct: 233 K------EARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+I+ +L+L + +M +GC+PN+ +F +LI+GFF + E ++ MI G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ V L+ GLC++ + A + G P Y L++ G+ A
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
EV + + G P+V+A T +++ L R +A L+E M E P++VTFN ++ L
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C GR A ++ G P+ TY+ L+ ++ R E LV +M G +L
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526
Query: 471 ATYNSYMDG 479
TYN+ + G
Sbjct: 527 VTYNTIIYG 535
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 5/275 (1%)
Query: 170 MNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ D + F M I+G P+V Y+ LI+G+ K + D A ++ M+ P+VV +
Sbjct: 367 LGDAVSVFNQME--INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++ CRN F+ A L M+ + C PN V+FNT I+G G + D + + +M
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC ++ T L+D L + R +A LV D RG+ Y ++ C G G
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
ALE++ ++ +G P I +I+ + K A LM+++ PD + + L+
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Query: 409 DLCD-VGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+C +G LR + S +G+ P+ T+++LV
Sbjct: 605 GICTHIGVEEAIVYLRRMLS-EGISPNVATWNVLV 638
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 5/288 (1%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+I + + ++AL + RM RVKP V +N ++ +F + ++ M++ G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
PNV ++N L++ + D + EM GC+ V+ L+ LC G+V +A
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
EL + F+ P Y L+ +C E A +++DE+ KG P+VI+ TT+I L
Sbjct: 237 ELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ ++ KM G P+ TF L++ G + +A +G+ P+
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ Y+ L+ G + + ++ N+M G P++ TY++ +DG + A
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 10/318 (3%)
Query: 171 NDGLLAFEAMRKLIDGRP---SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+D LA E + + + + + Y ++I RE D +M + +
Sbjct: 54 HDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDL 113
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE-M 286
F +I + R + AL F M++ P V +N ++ E +F + +N Y M
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF-QMINPIYSNM 172
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ G E + T IL+ LC RV A +L+++ S +G P + Y L+ LC G
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A E+ PSV LI G+ + EA L+++M+ +GI P+ +++ +
Sbjct: 233 KEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ L D G + + +G P+ T+ L+ G+ + E + + M+ EG
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Query: 467 IPDLATYNSYMDGLSNAR 484
+P++ YN+ M GL + R
Sbjct: 348 VPNVVAYNALMHGLCSKR 365
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +N I G D A+ +D+M P+ T+N L+ ++++F A GL
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M +G N+V++NT+I G+ E + + +M+ G + ++T I++D C
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G+V IA++++D L P +IA
Sbjct: 574 QGKV-----------------------------------NIAIQLMDRLSAGKWHPDIIA 598
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
T+LI G+ EA + +ML EGI P+ T+N L+ L
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + K++ +P N++I+ + K + + A+ DR+ + PD++ + LIS
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
G C + + A+ R M +G +PNV ++N L+R F
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLF 642
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++EKL E ++ ++ +G S ++I RR +A +M
Sbjct: 79 YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQ 138
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P +N +L+ L D R + + G++P+ TY+IL+ + NR
Sbjct: 139 DFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVD 198
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ EM +G PD +Y + + L K V++ R
Sbjct: 199 GAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK-VKEAR 236
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 180/393 (45%), Gaps = 9/393 (2%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCP 151
+F WA + FR F I+ LA + + V+ I+AN + I C
Sbjct: 405 LRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCV 464
Query: 152 EME---RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREF 206
E +I + + K + + L F+ K+I R P V N ++
Sbjct: 465 SSEVSVKILDLLIWVYSKKSMVEQCLSVFD---KMIKSRLSPDVKNCNRILRILRDKDLM 521
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ Y M +KP +VT+N L+ +C+ K L L EM+ +GC PN V++N L
Sbjct: 522 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 581
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G + +F++ + EM++ G + S+ T L+ G N+G + +A L + +G
Sbjct: 582 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGA 641
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y + LC G A++ + ++ LP V++ TLI G RL ++A
Sbjct: 642 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 701
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L +++ + P VT+N LL+ LC G A +L++ +G+ PD +TY ILV+G
Sbjct: 702 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 761
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + +EML EG D Y + + G
Sbjct: 762 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVG 794
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 36/324 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++++ K ++ GL M++ P+ YNVLING K EF++A G M
Sbjct: 543 YNTLLDSYCKGGKVQQGLDLLSEMQRR-GCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +K T+N LI G+ AL L EM KG +P V ++N+ I
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIY-------- 653
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
GLC GR+ A + + D +LP Y L
Sbjct: 654 ---------------------------GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 686
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C GN A + DEL P+++ TL++GL R + A L +M+ EGI
Sbjct: 687 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 746
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+ L+ C +G A +GL+ D Y + G + +
Sbjct: 747 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 806
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L EML +GF PDL YN +DGL
Sbjct: 807 LQEEMLAKGFPPDLIIYNVVVDGL 830
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 260 VVSFNTLIRGFFG--ERKFDEGVNMAYEMIELGCEFSSVTCEIL--VDGLCNEGRVLKAC 315
+++ N L+R + ER + ++ +++ GC S V+ +IL + + ++ +++ C
Sbjct: 430 ILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQC 489
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGN-AGIALEVVDELWKKGNLPSVIACTTLIEG 374
V D + L D + ++ + + A+EV + + G P+++ TL++
Sbjct: 490 LSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS 549
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ K + L+ +M + G P+ VT+N L+ L G A L GL
Sbjct: 550 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS 609
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+ L+ GY + E +L EM+ +G P +ATYNS++ GL
Sbjct: 610 AYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L V D++ K P V C ++ LR +A + M + GI P VT+N LL+
Sbjct: 490 LSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS 549
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G+ L +G P+ +TY++L++G +++ ++ + L+ EML G
Sbjct: 550 YCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS 609
Query: 470 LATYNSYMDGLSN 482
TYN + G N
Sbjct: 610 AYTYNPLIYGYFN 622
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 148/294 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP V YN L+N F K ++A ++ M R+ V +VVTF+ + FC+N A+
Sbjct: 261 RPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMK 320
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +MR KG PN V++ L+ G + D+ + + EM++ G + VT +LVDGLC
Sbjct: 321 LFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLC 380
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+V +A ++ R G+ + Y L+ N+ AL ++ E+ KG V
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVS 440
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI GL L+K EA L+ KM + G+ P++V + +++ + +A L
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G P+ +TY LV G + E + N+M+D G P++ Y + +DGL
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 148/308 (48%)
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
A A K I P V YN LI+G+ KC E ++ M +PDVVT+N L++ F
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ + + A F EM+ +G NVV+F+T + F E + + +M G + +
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNE 334
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT LVDG C GR+ A L + ++GV Y LV+ LC EG A +V
Sbjct: 335 VTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL 394
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ + G + + TTLI G + A L+ +M +G+ D + L+ LC++ +
Sbjct: 395 MERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQK 454
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+A L GL P+ + Y ++ + + E L+ +M+D GF P++ TY +
Sbjct: 455 LDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCA 514
Query: 476 YMDGLSNA 483
+DGL A
Sbjct: 515 LVDGLCKA 522
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 156/316 (49%), Gaps = 5/316 (1%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D +LA +R+L P+ N ++ + R + A ++++ P+V TFN
Sbjct: 144 LDDAVLALARVREL-RVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFN 198
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
I+I C+ A L M+ GC+P+VV++N+LI G+ + +E + EM
Sbjct: 199 IMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGC 258
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC VT LV+ C GR+ +A + R GV+ + V+ C G A
Sbjct: 259 GCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREA 318
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+++ ++ KG P+ + T L++G + + +A L +M+++G+ + VT+ L++
Sbjct: 319 MKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDG 378
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G+ +A+ + L G+ + + Y L+ G+ + +L++EM D+G D
Sbjct: 379 LCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELD 438
Query: 470 LATYNSYMDGLSNARK 485
++ Y + + GL N +K
Sbjct: 439 VSLYGALIWGLCNLQK 454
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 10/303 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N++I+ K + +A RM PDVVT+N LI G+ + + + L
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMR GC P+VV++N L+ F + + + EM G + VT VD C
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V +A +L +G+ P + Y LV+ C G AL + +E+ ++G +V+
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA- 426
T L++GL + K EA + M + GI + + + L+ G V + R L+
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIH-----GHFVYKNSERALSL 426
Query: 427 ----STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG++ D Y L+ G + E ++L+N+M + G P+ Y + MD
Sbjct: 427 LSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFK 486
Query: 483 ARK 485
ARK
Sbjct: 487 ARK 489
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 153/357 (42%), Gaps = 36/357 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V+AF K + + + F MR + +P+ Y L++G K D AL + M
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMR-MKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ V +VVT+ +L+ G C+ K A +FR M G N + + TLI G F +
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR-------------------------V 311
+ +++ EM + G E L+ GLCN + +
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480
Query: 312 LKAC----------ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ AC L+ G P Y LV+ LC G+ A+ +++ G
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGL 540
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V A T L++GL + + +A L+++M+ +G+ D+V L++ G DA
Sbjct: 541 EPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFA 600
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L+ GL D Y V G+ N +E +++EM++ G PD YN ++
Sbjct: 601 LKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 125/275 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +Y LI+G + ++AL M ++ DV + LI G C +K D A
Sbjct: 401 RANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKS 460
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E G PN V + ++ F RK E + + +M++ G + VT LVDGLC
Sbjct: 461 LLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC 520
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A G+ P Y LV+ LC G A+ ++DE+ KG +
Sbjct: 521 KAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNV 580
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
CT+L++G + +A L KM+ G+ D + C + C++ +A +
Sbjct: 581 VCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEM 640
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
G+ PD + Y+ L++ + +E L NEM
Sbjct: 641 IENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + F M K RP S+ +N L++ VK +++D + +M ++ D+
Sbjct: 65 KLNDAIDLFSDMVK---SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFNI+I+ FC + LAL + +M + G P+ V+ +L+ GF + + V++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+G + V ++D LC RV A + + R+G+ P Y LV LC
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ ++ KK P+VI + L++ + K +EA L E+M++ I PD VT++ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC R +A+++ L +KG D ++Y+ L++G+ + R ++G L EM G
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 467 IPDLATYNSYMDGLSNA 483
+ + TYN+ + G A
Sbjct: 362 VSNTVTYNTLIQGFFQA 378
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN F + NR++D + + M + I +P + YN +I+ K + + A F+ + R
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+VVT+ L++G C + ++ A L +M +K PNV++++ L+ F K E
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + + VT LV+GLC R+ +A ++ +G L Y L+
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +++ E+ ++G + + + TLI+G + +A +M GI PD
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL LCD G A + + +D D +TY ++ G + + +E +L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G PD+ TY + M GL
Sbjct: 461 LSLKGLKPDIVTYTTMMSGL 480
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 7/332 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F +++ L M KL P L+NGF + A+ D+M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD+V +N +I C+ K+ + A F+E+ KG PNVV++ L+ G ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +MI+ + +T L+D G+VL+A EL + R + P Y L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V LC A ++ D + KG L V++ TLI G + ++ + L +M + G+
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK---GLDPDGMTYHILVSGYTRENRRKE 453
+ ++VT+N L++ G D D+ + S G+ PD TY+IL+ G ++
Sbjct: 362 VSNTVTYNTLIQGFFQAG---DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M D+ TY + + G+ K
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ K R+ND F E RK I RP+V Y L+NG + A
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ P+V+T++ L+ F +N K A LF EM +P++V++++L+ G +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR 310
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE M M+ GC V+ L++G C RV +L + S+RG++ Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G+ A E ++ G P + L+ GL + +A + E M K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D VT+ ++ +C G+ +A L S KGL PD +TY ++SG + E E
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 456 NLVNEMLDEGFIPDLAT 472
L +M EG + + T
Sbjct: 491 ALYTKMKQEGLMKNDCT 507
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 11/311 (3%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN ++R +D L + ++K I P+V Y+ L++ FVK + +A ++ MVR
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKI--TPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD+VT++ L++G C + + D A +F M KGC +VVS+NTLI GF ++ ++G
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM + G ++VT L+ G G V KA E G+ P + Y L+
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G AL + +++ K+ ++ TT+I G+ + K EA L + +G+ PD
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+ ++ LC G + + L +GL + T + L+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIK 521
Query: 460 EMLDEGFIPDL 470
+ML G+ P L
Sbjct: 522 KMLSCGYAPSL 532
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 42/333 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFY-----DRMVRDRVKPDVVTFNILISGFCRNKKFD 242
PSV+ YN LI+G+ C++ ++ MV + P VTF +LI+G+C+N
Sbjct: 224 PSVATYNSLIDGY--CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ +F EM+++G +VV++N+LI G E K +EGV + EM +LG + +T ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C +G + A + + + R V P Y L++ G A+ V + + KKG
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V LI G R ASGL+++M ++GI D VT+N L+ LC G A +L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 423 RLLASTKGLDPDGMTYHILVSGY-------------TR-ENRRK---------------- 452
S GL+P+ +TY+ ++ G+ TR E RK
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 453 -----EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E +L+NEMLD+ +P+ TY + +G+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 159/311 (51%), Gaps = 12/311 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS S N L+ G V + D A + +R RV PD+ TFN +ISG CR + A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY------EMIELGCEFSSVTCEI 300
+ ++++ G P+V ++N+LI G+ +K G NM + EM+E G ++VT +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYC--KKGGAG-NMYHVDMLLKEMVEAGISPTAVTFGV 269
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C A + + ++G+ Y L+ LC EG +++++E+ G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+ I +++G + +A+ ++ M + + PD V +N L++ +G+ DA
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ + KG+ P+ TY+ L++G++R + L++EM ++G D+ TYN + L
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449
Query: 481 ---SNARKSVR 488
RK+V+
Sbjct: 450 CCKGEVRKAVK 460
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++ +G+ E M L P+ + ++ GF K A + D M
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDL-GLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDVV +NILI + R K + A+ + M +KG +PNV ++N LI GF +
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM E G E VT +L+ LC +G V KA +L+ + S G+ P Y +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C +GN A E+ + K +V+ I+ ++ K EA+ L+ +ML + +
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540
Query: 397 LPDSVTFNCLLEDLCDVGRTVD 418
+P+ +T+ + E + + G T D
Sbjct: 541 VPNGITYETIKEGMMEKGYTPD 562
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 169/373 (45%), Gaps = 48/373 (12%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E+ F ++ FVK +R++ G+ F M+K P +S+Y+VLI GF ++ DKAL Y
Sbjct: 79 EKTFCNLIHGFVKQSRVDKGVQLFYKMQKY-GLSPDISLYDVLIGGFCSNKKLDKALSLY 137
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKF-------------------------------- 241
M +++PD+ + LIS F K
Sbjct: 138 AEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGL 197
Query: 242 -DLALGLFREM--------------REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
D A L R M R++ PN SF+ +I G K D V + +M
Sbjct: 198 IDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDM 257
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
E+GC + L++GLCN R+ ++ +L+ + G P F + LC +
Sbjct: 258 AEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDV 317
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
AL++V ++ G P V T L+ L + K EAS + M++EG P+ + ++ L
Sbjct: 318 SGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSAL 377
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L L +V A +L S +G PD + Y+IL+ G +R +E NL NEM+ +G
Sbjct: 378 LGGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGL 437
Query: 467 IPDLATYNSYMDG 479
IP + TYN +DG
Sbjct: 438 IPSVVTYNLLIDG 450
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 137/299 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ + ++++ING ++ + D A+ + M D++ +N LI+G C + + + +
Sbjct: 228 RPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYK 287
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +EM E G P + N++ + +++ +M GCE +LV LC
Sbjct: 288 LLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLC 347
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ +A + D + G P Y L+ L AL++ ++ +G P VI
Sbjct: 348 KHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVI 407
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A L++GL + EA L +M+ +G++P VT+N L++ C G DA
Sbjct: 408 AYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSM 467
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
S K +P+ TY L+ G + R + L NEM G P+ + ++ GL K
Sbjct: 468 SAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDK 526
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 140/270 (51%), Gaps = 1/270 (0%)
Query: 215 RMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++ RD +++P+ +F+I+I+G + K DLA+ LF++M E GCN +++ +N LI G
Sbjct: 220 KLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNS 279
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ +E + EM E G + + T + LC V A +LV G P Y
Sbjct: 280 DRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHY 339
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV KLC G A A + ++ ++G P++IA + L+ GL +++ +A L + +
Sbjct: 340 TLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISA 399
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD + +N L++ L + RT +A L KGL P +TY++L+ G+ + +
Sbjct: 400 RGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDD 459
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
N + M + P++ TY + +DGL A
Sbjct: 460 AMNCLCSMSAKEREPNVFTYTTLIDGLCKA 489
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 156/344 (45%), Gaps = 27/344 (7%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F V +F K +++ E M + + R + + LI+GFVK DK + + +
Sbjct: 46 VFSILVLSFSKWGQVDKSFEFIEKMEEQ-NFRLNEKTFCNLIHGFVKQSRVDKGVQLFYK 104
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + + PD+ +++LI GFC NKK D AL L+ EM+ P++ + LI F E K
Sbjct: 105 MQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGK 164
Query: 276 FDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVID-------------- 320
+++ E +E + E ++ C ++ L N G + KAC L+ +
Sbjct: 165 L---IDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKL 221
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
F + P + ++ L +A+ + ++ + G ++ LI GL +
Sbjct: 222 FRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDR 281
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLC---DVGRTVD-ADRLRLLASTKGLDPDGM 436
E+ L+++M + G P T N + LC DV +D ++RL G +P
Sbjct: 282 LEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLY----GCEPWVK 337
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y +LV + + E + +M+ EGF P++ Y++ + GL
Sbjct: 338 HYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGL 381
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%)
Query: 173 GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
G L +L P V Y +L+ K + +A F MV++ P+++ ++ L+
Sbjct: 319 GALDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALL 378
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G ++ D AL LF+++ +G P+V+++N L++G + + +E N+ EM+ G
Sbjct: 379 GGLIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLI 438
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S VT +L+DG C G + A + S + P F Y L++ LC G A+ +
Sbjct: 439 PSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVML 498
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRK 380
+E+ ++G P+ +A I GL + K
Sbjct: 499 WNEMRRRGCRPNRVAFMGFIHGLCKCDK 526
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P++ Y+ L+ G ++ +E D+AL F D R R PDV+ +NIL+ G + + A
Sbjct: 369 PNIIAYSALLGGLIEVQEVDQALKLFKDISARGRC-PDVIAYNILMKGLYEAHRTEEARN 427
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG P+VV++N LI G+ D+ +N M E + T L+DGLC
Sbjct: 428 LFNEMVMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLC 487
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR A L + RRG P + G + LC AL E+ ++ P
Sbjct: 488 KAGRPDDAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTY 547
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+L+ + A +++KM+ PD + NC++
Sbjct: 548 VYISLVSAFVNISNFPMAFEILKKMVDRRNFPDPLDKNCII 588
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 128/287 (44%), Gaps = 21/287 (7%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+FD+AL ++ ++D D F+IL+ F + + D + +M E+ N +F
Sbjct: 25 KFDEALNVFNE-IQDHGWLDAYVFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFC 83
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI GF + + D+GV + Y+M + G ++L+ G C+ ++ KA L +
Sbjct: 84 NLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKML 143
Query: 325 GVLPKDFDYFGLVEKLCGE-GNAGIALEVVDELWKKGNLPS-VIACTTLIEGLRRLRKGV 382
+ P G+V KL G +++++E + N+ + + C +++ L
Sbjct: 144 KIQPD----IGVVSKLISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGLID 199
Query: 383 EASGLMEKMLKEG--------------ILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+A L+ M+ G I P++ +F+ ++ L + A L +
Sbjct: 200 KACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAE 259
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G + D + Y+ L++G +R +E L+ EM + GF P T NS
Sbjct: 260 IGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNS 306
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 137 ANPCPCSNDGIFSCPEME-RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY 193
A C CS S E E +F + ++ KA R +D ++ + MR+ RP+ +
Sbjct: 460 AMNCLCS----MSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRR-GCRPNRVAF 514
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
I+G KC + + AL + M + ++PD + L+S F F +A + ++M +
Sbjct: 515 MGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNISNFPMAFEILKKMVD 574
Query: 254 KGCNPNVVSFNTLI 267
+ P+ + N +I
Sbjct: 575 RRNFPDPLDKNCII 588
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 156/326 (47%), Gaps = 33/326 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS Y LI+ F K +F+ A G M + P V ++ +I+G C+N+K D A L
Sbjct: 109 PSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQL 168
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM+ GC P+ V++NTLI G +++ E ++ M+E + +T L++GLC
Sbjct: 169 FEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCT 228
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV-------------- 353
R+ +A L +++G P + LV KLC AL VV
Sbjct: 229 TDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYT 288
Query: 354 -------------------DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ ++G P+V+ T +GL ++G+ A +ML++
Sbjct: 289 PIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 348
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD V +N L++ C R A+++ GL P+ +TY+ LV + R+ + +
Sbjct: 349 GIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 408
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L++ M+ G PD+AT+++ + GL
Sbjct: 409 GELLHTMVSRGRQPDVATWSTLVAGL 434
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 155/352 (44%), Gaps = 38/352 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ KA R++ + FE M + P V YN L+ G K +A + M
Sbjct: 48 YNVVIDTLCKARRISRAIEFFETMPE-----PDVVTYNTLLGGLCKNGRVAQACSLFGSM 102
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VT+ LI FC+ +F+ A GL + M + C+P V S+ ++I G RK
Sbjct: 103 EGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 162
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM GC+ VT L+ GLC + R+ +A +L+ P + L
Sbjct: 163 DQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTAL 222
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGV----------- 382
+E LC A + + K+G P ++ T L+ L R+LR +
Sbjct: 223 IEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPE 282
Query: 383 -------------------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
A+ L++KM + G+ P+ VT+ + L D + A R
Sbjct: 283 AVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREF 342
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+G++PD + Y++LV G+ + NR E +V M G P++ TYN+
Sbjct: 343 RRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNT 394
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 128/301 (42%), Gaps = 39/301 (12%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D +P+ Y L+ + + DKA M R+++ PDV T+N++I C+ ++ A
Sbjct: 5 DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 64
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ F M E P+VV++NTL+ G
Sbjct: 65 IEFFETMPE----PDVVTYNTLL-----------------------------------GG 85
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GRV +AC L G+ P D Y L++ C A ++ + + P+
Sbjct: 86 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 145
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V + ++I GL + RK +A L E+M G PD VT+N L+ LC R +A L
Sbjct: 146 VYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLT 205
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ PD +T+ L+ G +R KE L M +G PDL T+ + L R
Sbjct: 206 VMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRR 265
Query: 485 K 485
K
Sbjct: 266 K 266
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC---------- 236
+P + LI G +A + M + PD+VT +L+S C
Sbjct: 213 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALS 272
Query: 237 -----------------------RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
R + FD A L ++M +G PNVV++ +G G+
Sbjct: 273 VVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL-GD 331
Query: 274 RKFDEGVNMAYE---MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K EG+ E M+E G E V +LVDG C R+ A ++V + G+ P
Sbjct: 332 WK--EGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNI 389
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y LV C +G E++ + +G P V +TL+ GL R+ + A +
Sbjct: 390 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNL 449
Query: 391 MLKEG 395
+ +G
Sbjct: 450 AMSQG 454
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 179/382 (46%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F +
Sbjct: 5 TNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
++ F+ + A++++ ++D L F R+ P + VL F+K + F GF
Sbjct: 65 DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVL-EHFMKLKYFKSVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ + LA +F E+ + G P+VVSFNTL+ G+
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A EL + G++P
Sbjct: 184 LGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G+ +A+E E+ ++G P +I TLI GL + +A L+++M
Sbjct: 244 FTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A + + + + D + Y L+SG RE +
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
E ++ EML G PD TY
Sbjct: 364 GAEKMLREMLSVGLKPDNGTYT 385
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K E A +D + + ++P VV+FN L++G+ R D
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEG 190
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K ++ + EMI G + VT L+DG
Sbjct: 191 FRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDG 250
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G + A E + R+G P Y L+ LC EG+ A +++DE+ KG P
Sbjct: 251 HCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPD 310
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M+KE I D V + L+ LC G++V A+++
Sbjct: 311 KITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLR 370
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ GL PD TY ++++ + ++ K G L+ EM +G +P + T
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 3/270 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K M F+ + K RPSV +N L+NG+++
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKW-GLRPSVVSFNTLMNGYIRLG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ M ++PDV T+++LI+G C+ K + A LF EM G PN V+F
Sbjct: 186 DLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G D + EM+ G +T L+ GLC EG + +A +L+ + S +
Sbjct: 246 TLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ A + + K+ +A T LI GL R + V A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGA 365
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ +ML G+ PD+ T+ ++ + C G
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKG 395
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++MND F+ M + +G P+ + LI+G K D A+ Y
Sbjct: 209 YSVLINGLCKESKMNDANELFDEM--IGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKE 266
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 267 MLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ MI+ V L+ GLC EG+ + A +++ + G+ P + Y
Sbjct: 327 LETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTM 386
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C +G+ + +++ E+ + G++P V+
Sbjct: 387 IINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
EG RL A + +++ K G+ P V+FN L+ +G + RL+ G+
Sbjct: 149 EGEMRL-----AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQ 203
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
PD TY +L++G +E++ + L +EM+ G +P+ T+ + +DG
Sbjct: 204 PDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDG 250
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 166/330 (50%), Gaps = 8/330 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGF 212
E IF + +K +M + + M L G+P +V + L+ G+ K + D AL
Sbjct: 294 EVIFTRVIGVCMKQGKMLEAVKVKGEM--LSCGKPMNVVVATTLMKGYCKQGDLDSALEL 351
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D+M + + P+ VT+ ++I C+N D A ++ +M+ K +P V + N+LIRG+
Sbjct: 352 FDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLK 411
Query: 273 ERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
R +E + E + C ++V T L+ LC EG++ +AC + R+GV P
Sbjct: 412 ARSPEEASKLFDEAV--ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVV 469
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y ++ C +G+ A V E+ +KG P++I + L++G + A GL ++M
Sbjct: 470 SYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
E I P T N ++ LC GRT ++ DRL+ L +G P MTY+ ++ G+ +E
Sbjct: 530 RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQ-EGFIPTCMTYNCIIDGFVKEGS 588
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ EM G P++ TY + ++G
Sbjct: 589 VNSALAVYTEMCKIGVSPNVFTYTNLINGF 618
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 35/328 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRM---------------------------VRD 219
+P++ Y+VL++G+ K + + A G YDRM +D
Sbjct: 500 KPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQD 559
Query: 220 RVK--------PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
R+K P +T+N +I GF + + AL ++ EM + G +PNV ++ LI GF
Sbjct: 560 RLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
D + + EM G E L+DG C +G ++ A +L+ + G+ P
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y ++ N AL + + +G + TTLI GL + K + AS L +M
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L +GI+PD +T++ L+ LC+ G+ +A ++ K + P Y+ L++G+ +E
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E L NEMLD+G +PD TY+ ++G
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNG 827
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 159/345 (46%), Gaps = 40/345 (11%)
Query: 178 EAMRKLID-----GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
E KL D G +V YN L++ K + +A +++MVR V+P VV++N +I
Sbjct: 416 EEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMI 475
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ D A G+F EM EKG PN+++++ L+ G+F + + + M
Sbjct: 476 LGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA 535
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S TC I+++GLC GR ++ + + + G +P Y +++ EG+ AL V
Sbjct: 536 PSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAV 595
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ K G P+V T LI G + A +M++M +GI D + L++ C
Sbjct: 596 YTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCR 655
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR-ENRR-------------------- 451
G V+A +L GL P+ + Y ++SG+ + +N
Sbjct: 656 KGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQI 715
Query: 452 ---------KEGE-----NLVNEMLDEGFIPDLATYNSYMDGLSN 482
KEG+ L EML +G +PDL TY+ + GL N
Sbjct: 716 YTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCN 760
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 218/566 (38%), Gaps = 104/566 (18%)
Query: 7 KLPPILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTN 66
K P L P P PL P P P + PT+ + L + ++ T N
Sbjct: 18 KSPKTLSSQPELPNIPISETPLSQNPH-PNTNFPGKS-APTSQDSFLTQ--TQYIDTLLN 73
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF- 125
+Q P S L + F WAS ++ L S
Sbjct: 74 HQNDPQSALSY------------------FTWASQKRGLIKSVDALCVLLHILTKSTETC 115
Query: 126 SELHSVLN-FISANPCPCSNDGIFSCPEMER---------IFHFAVNAFVKANRMNDGLL 175
+ ++LN F S + P + + E R +F++ +N++VK R+ND +
Sbjct: 116 GKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVD 175
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT-------- 227
F ++ + D P +++ N+ ++ VK +A Y++M VK D T
Sbjct: 176 CFNSLIEK-DIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRAS 234
Query: 228 ---------------------------FNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
++I+I C+ ALGL REMR+KG P+
Sbjct: 235 MREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHE 294
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V F +I + K E V + EM+ G + V L+ G C +G + A EL
Sbjct: 295 VIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDK 354
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR- 379
+ G+ P + Y ++E C GN A E+ +++ K P+V +LI G + R
Sbjct: 355 MNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARS 414
Query: 380 ---------------------------------KGVEASGLMEKMLKEGILPDSVTFNCL 406
K EA + EKM+++G+ P V++N +
Sbjct: 415 PEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C G A+ + + KGL P+ +TY +L+ GY ++ + L + M E
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534
Query: 467 IPDLATYNSYMDGLSNA-RKSVRQTR 491
P T N ++GL A R S Q R
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDR 560
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 38/342 (11%)
Query: 176 AFEAMRKLIDGRPSVSIYNV--LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+E ++ + S +++NV LI G++K R ++A +D V + +V T+N L+S
Sbjct: 383 AYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLS 441
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--- 290
C+ K A ++ +M KG P+VVS+N +I G + D + EM+E G
Sbjct: 442 WLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKP 501
Query: 291 -----------------CEF---------------SSVTCEILVDGLCNEGRVLKACELV 318
E+ S TC I+++GLC GR ++ + +
Sbjct: 502 NLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRL 561
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ G +P Y +++ EG+ AL V E+ K G P+V T LI G +
Sbjct: 562 KKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKS 621
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
A +M++M +GI D + L++ C G V+A +L GL P+ + Y
Sbjct: 622 NNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVY 681
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++SG+ + + +L M++EG DL Y + + GL
Sbjct: 682 SSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGL 723
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 13/297 (4%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N KA R ++ + + ++KL+ P+ YN +I+GFVK + AL Y
Sbjct: 542 NIIINGLCKAGRTSE---SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + V P+V T+ LI+GFC++ DLAL + EM+ KG +V + LI GF +
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV---LPKDFD 332
+ E+ E+G + V ++ G R L+ E + +R + +P D
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGF----RKLQNMEAALHLHKRMINEGIPCDLQ 714
Query: 333 -YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ L EG A E+ E+ KG +P +I + LI GL + A ++E M
Sbjct: 715 IYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM 774
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++ + P +N L+ G +A RL KGL PD TY ILV+G ++
Sbjct: 775 DRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ F K M L + R + +G P + IY LI+G +K + A Y
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHK--RMINEGIPCDLQIYTTLISGLLKEGKLLFASELYA 737
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PD++T+++LI G C + + A + +M K P V +NTLI G F E
Sbjct: 738 EMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEG 797
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
E + EM++ G T +ILV+G +G +
Sbjct: 798 NLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+VLI+G + + A + M R + P V +N LI+G + A L
Sbjct: 746 PDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRL 805
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
EM +KG P+ +++ L+ G + G + A
Sbjct: 806 HNEMLDKGLVPDDTTYDILVNGKVKDGNLFSGASSA 841
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 170/334 (50%), Gaps = 6/334 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F R++ LA M +L+ + +P+V Y +LI + D+A+ D
Sbjct: 184 YNILIGNFCGRGRLD---LALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLD 240
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++PD T+N++++G C+ D A + + GC V ++N L+R E
Sbjct: 241 EMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEG 300
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K++ G + +M+ GCE + +T L+ LC +G++ +A ++ + + P + Y
Sbjct: 301 KWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYD 360
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC EG +A+E +D++ G+LP +++ +++ L + EA + EK+ +
Sbjct: 361 PLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV 420
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++ ++N L L G + A + L + G+DPD +TY+ L+S R+ +
Sbjct: 421 GCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA 480
Query: 455 ENLVNEMLD-EGFIPDLATYNSYMDGLSNARKSV 487
L+ +M + E P + +YN+ + GL ++ +
Sbjct: 481 IELLVDMFESEKCQPTVISYNTVLLGLCKVQRII 514
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 151/294 (51%), Gaps = 1/294 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V + LI GF ++ +KA+ + ++ KPDV +N +ISGFC+ + D A
Sbjct: 109 KPDVILCTKLIKGFFNMKKIEKAIQVME-ILEKHGKPDVFAYNAVISGFCKADRVDHASK 167
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M+++G P+VV++N LI F G + D + + ++++ C+ + +T IL++
Sbjct: 168 VLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATI 227
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G + +A +L+ + RG+ P + Y +V +C EG A E + + K G + V
Sbjct: 228 TQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVS 287
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L+ L K LM ML +G P+ +T++ L+ LC G+ +A + +
Sbjct: 288 TYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVM 347
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K L PDG +Y L+S RE + +++M+ G +PD+ +YNS + L
Sbjct: 348 KEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASL 401
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 2/328 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F ++ + E + K G+P V YN +I+GF K D A DRM +
Sbjct: 119 IKGFFNMKKIEKAIQVMEILEK--HGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PDVVT+NILI FC + DLAL + ++ + C P V+++ LI + DE +
Sbjct: 177 FEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAM 236
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ G T ++V+G+C EG + +A E + S+ G + Y L+ L
Sbjct: 237 KLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG +++ ++ KG P+ I +TLI L R K EA +++ M ++ + PD
Sbjct: 297 LNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+++ L+ LC G+ A + G PD ++Y+ +++ + E N+ +
Sbjct: 357 YSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + G P+ +YN+ L ++ +R
Sbjct: 417 LGEVGCPPNAGSYNTLFGALWSSGDKIR 444
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 2/250 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ Y+ LI + + D+A M + PD +++ LIS CR K DLA+
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+M G P+++S+N+++ DE +N+ ++ E+GC ++ + L L
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALW 437
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV-VDELWKKGNLPSV 365
+ G ++A ++++ G+ P + Y L+ LC +G A+E+ VD + P+V
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RL 424
I+ T++ GL ++++ ++A ++ M+ EG LP+ T+ L++ + G DA L L
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANL 557
Query: 425 LASTKGLDPD 434
L + + D
Sbjct: 558 LVNMDAISED 567
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 34/186 (18%)
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG---LRRLRKGVE-- 383
+D ++ + + C +L + + +G P VI CT LI+G ++++ K ++
Sbjct: 76 RDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM 135
Query: 384 -----------------------------ASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
AS ++++M K G PD VT+N L+ + C G
Sbjct: 136 EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRG 195
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R A R+ P +TY IL+ + E L++EML G PD TYN
Sbjct: 196 RLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYN 255
Query: 475 SYMDGL 480
++G+
Sbjct: 256 VVVNGM 261
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 179/384 (46%), Gaps = 20/384 (5%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
D + + T+ +VR+L ++R +L+ ++ CP P+ + + V+
Sbjct: 163 DGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCP---------PD-DVTYGTIVS 212
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF--DKALGFYDRMVRDR 220
A R++ EA L P + YN +I CREF + MV
Sbjct: 213 ALCTLGRVD------EATEVLSAAPPVAASYNAVI--LALCREFRMQEVFAVVGDMVGRG 264
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+V+T+ +++ FC+ + +A + M GC PNV +F L+ G F + + + +
Sbjct: 265 LQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDAL 324
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+M M+ G S+V+ +L+ GLC+ G + A ++ D + G P Y L++
Sbjct: 325 DMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGF 384
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G+ A+ + +++ + G P+V+ T ++ + +A L++KML E P++
Sbjct: 385 SKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNT 444
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VTFN L+ LC+ R A + G P+G TY+ L+ G RE + +V E
Sbjct: 445 VTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIE 504
Query: 461 MLDEGFIPDLATYNSYMDGLSNAR 484
M + G L TYN+ + GL R
Sbjct: 505 MQNHGIELSLVTYNTVVSGLCQMR 528
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 3/335 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE 205
I C F V R++D L ++ M + +G PS YNVLI G +
Sbjct: 297 ITGCTPNVATFTALVGGLFNDGRVHDALDMWKCM--VAEGWAPSTVSYNVLIRGLCSVGD 354
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A + M + P+ T++ LI GF + D A+ ++ +M GC PNVV +
Sbjct: 355 LKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++ F + F++ ++ +M+ C ++VT L+ LCN RV +A + + R G
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y L+ L EGN G AL++V E+ G S++ T++ GL ++R G EA
Sbjct: 475 CPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAM 534
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ +M+ GI PD+ TF ++ C G A + + + + Y IL++
Sbjct: 535 FFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAEL 594
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ ++ + +ML EG P+ T+N + G+
Sbjct: 595 CNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 168/410 (40%), Gaps = 52/410 (12%)
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
VR LA++ + L + PC+ + + AV AF +A + L
Sbjct: 68 VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVA----------AVGAFARAGAPDRALK 117
Query: 176 AF-EAMRKLIDGRPSV-SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
F A+ L RP+ +YN LI+ ++ M +D V+P+V T+N+L+
Sbjct: 118 TFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVR 177
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+N + A + EM KGC P+ V++ T++ + DE + + +
Sbjct: 178 ALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASY 237
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
++V + LC E R+ + +V D RG+ P Y +V C G +A ++
Sbjct: 238 NAV-----ILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAIL 292
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ G P+V T L+ GL + +A + + M+ EG P +V++N L+ LC V
Sbjct: 293 ARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSV 352
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR---------------------- 451
G A + G P+ TY L+ G+++
Sbjct: 353 GDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVY 412
Query: 452 -------------KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ E+L+++ML E P+ T+N+ + L N R+ R
Sbjct: 413 TNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGR 462
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 73/200 (36%), Gaps = 48/200 (24%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ TF ++RSL + R V + + + CP R ++ ++ +
Sbjct: 443 NTVTFNTLIRSLCNCRRVGRALGVFHEMRRH----------GCPPNGRTYNELLHGLFRE 492
Query: 168 NRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
D L + E I+ S+ YN +++G + R +A+ F RM+ ++PD
Sbjct: 493 GNCGDALQMVIEMQNHGIE--LSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCN----------------------------- 257
TF +I +C+ + +A + M C
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKM 610
Query: 258 ------PNVVSFNTLIRGFF 271
PN V++N L+RG F
Sbjct: 611 LYEGIYPNTVTWNVLVRGVF 630
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 162/306 (52%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A R+++ RP S+ +N L++ VK +++D + +M ++ D+ TFNI+I+
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FC + LAL + +M + G P+ V+ +L+ GF + + V++ +M+E+G
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V ++D LC RV A + + R+G+ P Y LV LC G A ++
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ K+ P+VI + L++ + K +EA + E+M++ I PD VT++ L+ LC
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R +A+++ L +KG PD ++Y+ L++G+ + R ++G L +M G + + TY
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368
Query: 474 NSYMDG 479
N+ + G
Sbjct: 369 NTLIQG 374
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 164/326 (50%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A VK + D +++ +++ R + +N++IN F C + AL +M
Sbjct: 88 FNRLLSAIVKMKKY-DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKM 146
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +PD VT L++GFCR + A+ L +M E G P++V++N +I R+
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRV 206
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ ++ E+ G + VT LV+GLCN GR A L+ D +R + P Y L
Sbjct: 207 NDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSAL 266
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G A E+ +E+ + P ++ ++LI GL + EA+ + + M+ +G
Sbjct: 267 LDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD V++N L+ C R D +L S +GL + +TY+ L+ G+ + + +
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
++M G PD+ TYN + GL +
Sbjct: 387 FFSQMDSFGVSPDIWTYNILLGGLCD 412
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN F + NR++D + + M + I RP + YN +I+ K R + AL F+ + R
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVE-IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+VVT+ L++G C + +++ A L R+M ++ PNV++++ L+ F K E
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + + VT L++GLC R+ +A ++ +G P Y L+
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +++ ++ ++G + + + TLI+G ++ +A +M G+ PD
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL LCD G A + +D D +TY ++ G + + ++ L
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCS 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G PD+ TY + M GL
Sbjct: 461 LSLKGLKPDIVTYTTMMSGL 480
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F +++ L M KL P L+NGF + A+ D+M
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD+V +N +I C+ ++ + AL F+E+ KG PNVV++ L+ G ++
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + +MI+ + +T L+D G+VL+A E+ + R + P Y L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ D + KG P V++ TLI G + ++ + L KM + G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ ++VT+N L++ VG A + G+ PD TY+IL+ G ++
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M D+ TY + + G+ K
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 141/273 (51%), Gaps = 5/273 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
VN + R ND A +R +I + P+V Y+ L++ FVK + +A ++ MVR
Sbjct: 232 VNGLCNSGRWND---AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR 288
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ PD+VT++ LI+G C + + D A +F M KGC P+VVS+NTLI GF ++ ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
G+ + +M + G ++VT L+ G G V KA E GV P + Y L+
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G AL + +++ K ++ TT+I+G+ + K +A GL + +G+ P
Sbjct: 409 GLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
D VT+ ++ LC G + + L +GL
Sbjct: 469 DIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 35/272 (12%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ + MV+ R P +V FN L+S + KK+D+ + L ++M G ++ +FN +I
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
F + +++ +M++LG E VT LV+G C RV A LV
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV---------- 178
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
D++ + G P ++A +I+ L + R+ +A
Sbjct: 179 -------------------------DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFF 213
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+++ ++GI P+ VT+ L+ LC+ GR DA RL + + P+ +TY L+ + +
Sbjct: 214 KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKN 273
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ E + + EM+ PD+ TY+S ++GL
Sbjct: 274 GKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 148/321 (46%), Gaps = 33/321 (10%)
Query: 51 THLLRFLKTHLLTPTNNQITPSSLLH-FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDH 109
LLR + +TP N IT S+LL F+K+ + IF + S D
Sbjct: 245 ARLLRDMIKRKITP--NVITYSALLDAFVKNGKVLEAK------EIFEEMVRM-SIDPDI 295
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++ L R E + + + + + C P++ ++ +N F KA R
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCF---------PDVVS-YNTLINGFCKAKR 345
Query: 170 MNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ DG+ F M R L++ + YN LI GF + + DKA F+ +M V PD+ T
Sbjct: 346 VEDGMKLFRKMSQRGLVNNTVT---YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWT 402
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+NIL+ G C N + AL +F +M++ + ++V++ T+I+G K ++ + +
Sbjct: 403 YNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLS 462
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNA 346
G + VT ++ GLC +G + L + G++ D LC G+G+
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND-------SMLCLGDGDI 515
Query: 347 GIALEVVDELWKKGNLPSVIA 367
I+ E++ ++ G PS++
Sbjct: 516 TISAELIKKMLSCGYAPSLLG 536
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 157/326 (48%), Gaps = 33/326 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS Y LI+ F K +F+ A G M + P V ++ +I+G C+N+K D A L
Sbjct: 134 PSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQL 193
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM+ GC P+ V++NTLI G +++ E ++ M+E G + +T L++GLC
Sbjct: 194 FEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCT 253
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV-------------- 353
R+ +A L +++G P + LV KLC AL VV
Sbjct: 254 TDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYT 313
Query: 354 -------------------DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ ++G P+V+ T +GL ++G+ A +ML++
Sbjct: 314 PIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ 373
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD V +N L++ C R A+++ GL P+ +TY+ LV + R+ + +
Sbjct: 374 GIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAI 433
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L++ M+ G PD+AT+++ + GL
Sbjct: 434 GELLHTMVSRGRQPDVATWSTLVAGL 459
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 38/352 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ KA R++ + FE M + P V YN L+ G K +A + M
Sbjct: 73 YNVVIDTLCKARRISRAIEFFETMPE-----PDVVTYNTLLGGLCKNGRVAQACSLFGSM 127
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VT+ LI FC+ +F+ A GL + M + C+P V S+ ++I G RK
Sbjct: 128 EGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 187
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM GC+ VT L+ GLC + R+ +A +L+ G P + L
Sbjct: 188 DQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTAL 247
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG---LRRLRKGV----------- 382
+E LC A + + K+G P ++ T L+ LR+LR +
Sbjct: 248 IEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPE 307
Query: 383 -------------------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
A+ L++KM + G+ P+ VT+ + L D + A R
Sbjct: 308 AVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREF 367
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+G++PD + Y++LV G+ + +R E +V M G P++ TYN+
Sbjct: 368 RRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNT 419
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 4/292 (1%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L++ + R ++ + + R+ KP+ +++ L+ CR K D A EM
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ P+V ++N +I R+ ++ A E E E VT L+ GLC GRV +
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARR----ISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQ 119
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
AC L G+ P D Y L++ C A ++ + + P+V + ++I
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + RK +A L E+M G PD VT+N L+ LC R +A L + G P
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP 239
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D +T+ L+ G +R KE L M +G PDL T+ + L RK
Sbjct: 240 DKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRK 291
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V+ N L+ R+ ++ V + + C+ ++++ LV LC G++ KAC + +
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+R ++P F Y +++ LC A+E + + + P V+ TL+ GL + +
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L M GI P VT+ L++ C + + A L L +++ P +Y
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++G + + + L EM G PD TYN+ + GL
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 39/245 (15%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC---------- 236
+P + LI G +A + M + PD+VT +L+S C
Sbjct: 238 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALS 297
Query: 237 -----------------------RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
R + FD A L ++M +G PNVV++ +G G+
Sbjct: 298 VVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL-GD 356
Query: 274 RKFDEGVNMAYE---MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K EG+ E M+E G E V +LVDG C R+ A ++V + G+ P
Sbjct: 357 WK--EGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNI 414
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y LV C +G E++ + +G P V +TL+ GL + + A +
Sbjct: 415 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNL 474
Query: 391 MLKEG 395
+ +G
Sbjct: 475 AMSQG 479
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 156/318 (49%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N +N F M K R VS Y LI+G + D+ + + +M D P V T
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVS-YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ +++ + + A+ LF EMRE+GC PN+ ++ +I E K +EG + EM+
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
E G S T L+DG C EG V A E++ P + Y L+ C + N
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ ++ ++ + PSV+ +LI G ++ A L+ M + G++PD T++ +
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC GR +A+ L KG+ + + Y L+ GY + + + +L++ ML E +
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316
Query: 468 PDLATYNSYMDGLSNARK 485
P+ +TYN+ +DGL RK
Sbjct: 317 PNSSTYNALIDGLCKERK 334
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 157/328 (47%), Gaps = 1/328 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C R + V+A ++ R + + F MR+ P++ Y V+IN K + ++
Sbjct: 70 CYPTVRTYTVIVHALFESGRRMEAINLFSEMRER-GCEPNIHTYTVMINAMCKETKLEEG 128
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
D MV + P V T+N LI G+C+ + A + M CNPN ++N LI G
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F ++ + + +M+E S VT L+ G C G + A L+ + GV+P
Sbjct: 189 FCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ Y ++ LC +G A + + L +KG + + T LI+G + K +A+ L++
Sbjct: 249 QWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLD 308
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ML E LP+S T+N L++ LC + +A L KGL TY IL+ +E
Sbjct: 309 RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYM 477
++++M+ G+ PD+ Y +++
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFI 396
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 148/325 (45%), Gaps = 5/325 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +NA K ++ +G + M + L+ PSV YN LI+G+ K + A D
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGLV---PSVPTYNALIDGYCKEGMVEAAQEILD 168
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+ T+N LI GFCR K A+ L +M E P+VV++N+LI G
Sbjct: 169 LMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIG 228
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D + M E G T + +D LC +GR+ +A L +G+ + Y
Sbjct: 229 YLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C G A ++D + + LP+ LI+GL + RK EA LME M+++
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ T+ L+ + G A R+ + G PD Y + + KE
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
E++++ M + G +PD TY +D
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVIDA 433
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 6/303 (1%)
Query: 178 EAMRKLID------GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
EA ++++D P+ YN LI GF + + +A+ +M+ R+ P VVT+N L
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G C+ D A L M E G P+ +++ I + + +E + + E G
Sbjct: 221 IHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ + V L+DG C G++ A L+ LP Y L++ LC E AL
Sbjct: 281 KANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALL 340
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+++ + +KG +V T LI + + A ++++M+ G PD + + C
Sbjct: 341 LMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFC 400
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G +A+ + + +G+ PD +TY +++ Y +++ M D G P
Sbjct: 401 TRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHH 460
Query: 472 TYN 474
TY+
Sbjct: 461 TYS 463
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 156/380 (41%), Gaps = 31/380 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ + +L R E + + N + + E I+ ++ + KA
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN----------EVIYTALIDGYCKA 297
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+M+D + M D P+ S YN LI+G K R+ +AL + M++ +K V T
Sbjct: 298 GKMDDANSLLDRMLTE-DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ ILI + FD A + +M G P+V + I F E +M M
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
E G ++T +++D G + A +++ G P Y L++ L E
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE---- 472
Query: 348 IALEVVDELWKKGNLPSVIACTTL-------IEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EL KK +V C ++ + + ++ K A L EKML+ G P+
Sbjct: 473 -------ELTKK--YKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNI 523
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+ L+ LC VGR A +L + +G+ P Y+ L++ + LV
Sbjct: 524 NTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGA 583
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M++ G +P L + N GL
Sbjct: 584 MMEHGHLPLLESLNVLFCGL 603
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 155/396 (39%), Gaps = 69/396 (17%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREF 206
SC ER ++ + F + ++ A + K+++ R PSV YN LI+G K
Sbjct: 174 SCNPNERTYNELICGFCRKKNVHR---AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL 230
Query: 207 DKALGFYDRMVRDRVKPDVVTFNI-----------------------------------L 231
D A + M + V PD T+++ L
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G+C+ K D A L M + C PN ++N LI G ERK E + + MI+ G
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ + T IL+ + EG A ++ G P + Y + C GN A +
Sbjct: 351 KCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAED 410
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE--- 408
++ ++++G +P + T +I+ L A ++++M G P T++CL++
Sbjct: 411 MMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLL 470
Query: 409 -----------------------DLCDVGRTVDADR-LRLLAST--KGLDPDGMTYHILV 442
D+ DV + + + L L G P+ TY L+
Sbjct: 471 KEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLI 530
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
G + R + L + M + G P A YNS ++
Sbjct: 531 IGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 116/287 (40%), Gaps = 29/287 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V IY I+ F +A M V PD +T+ ++I + + A
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGER-----------------------------KFD 277
+ + M + GC+P+ +++ LI+ E KF+
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + +M+E GC + T L+ GLC GR+ A +L + RGV P + Y L+
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C G G A+ +V + + G+LP + + L GL +A + +L+ G
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
D V + L++ L G + L + +G TY +L+ G
Sbjct: 626 DDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 76/194 (39%), Gaps = 3/194 (1%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
C + +F V K + L FE M L G P+++ Y LI G K
Sbjct: 484 CDSIPNVFFADVADVWKMMKFETALELFEKM--LEHGCSPNINTYAKLIIGLCKVGRLGV 541
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A +D M V P +N L++ C + A+ L M E G P + S N L
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + E ++ + +++ G V +IL+DGL G EL+ RG
Sbjct: 602 GLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQI 661
Query: 329 KDFDYFGLVEKLCG 342
Y L+E L G
Sbjct: 662 HPQTYRMLIEGLDG 675
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 178/396 (44%), Gaps = 18/396 (4%)
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL-NFISANPC-----------PCSNDG 146
+S + +H H + FI+ L SS FS S+L IS +
Sbjct: 15 SSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQPH 74
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCR 204
+ S P I +NA V++ L M R L+ P + +N L+ +K
Sbjct: 75 LDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLV---PGSNTFNNLLILLIKSN 131
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
F+KA ++ + VK DV +F I+I G C D + +M E G +PNVV +
Sbjct: 132 FFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYT 190
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G + G + Y+M EL + T +L++G G EL
Sbjct: 191 TLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLT 250
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G++P + Y ++ + C +G A E+ DE+ ++G +V+ TLI GL + R+ +EA
Sbjct: 251 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 310
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
LM +M ++G+ P+ +++N L++ C +G A L + G P TY+IL++G
Sbjct: 311 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 370
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ ++V EM G P TY MD L
Sbjct: 371 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 406
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 136/283 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLINGF K + Y++M + P+V T+N +I C + K + A LF EMR
Sbjct: 224 YTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR 283
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G NVV++NTLI G ER+ E + M G + ++ L+DG C+ G +
Sbjct: 284 ERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLD 343
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L G P Y L+ N+ ++V E+ +G PS + T L+
Sbjct: 344 KASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILM 403
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L R +A + M K G++ D + L+ LC VG +A +L L
Sbjct: 404 DALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLK 463
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
P+ + Y+ ++ GY +E L+ EM + G +P++A+YNS
Sbjct: 464 PNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 1/321 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+ + +N F K DG+ +E M KL P+V YN +I + + A +
Sbjct: 221 QYTYTVLINGFFKMGLKKDGIELYEKM-KLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M V +VVT+N LI G C+ ++ A L M+ G +PN++S+NTLI G+
Sbjct: 280 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSI 339
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+ ++ +M G S T IL+ G ++V + RG+ P Y
Sbjct: 340 GNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 399
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L N A ++ + K G + + LI GL + EAS L + + +
Sbjct: 400 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ P+ V +N ++ C G + A RL G+ P+ +Y+ + ++ + E
Sbjct: 460 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTE 519
Query: 454 GENLVNEMLDEGFIPDLATYN 474
E L+ +M++ G P ++ +N
Sbjct: 520 AEVLLKDMIELGLKPSISIWN 540
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 14/280 (5%)
Query: 140 CPCSNDG----IFSCPEMERIFHFAVNAFVKANRMNDGLL----AFEAMRKLI----DG- 186
C C NDG F + R A N V N + GL EA R + DG
Sbjct: 264 CRCCNDGKLNNAFELFDEMRERGVACNV-VTYNTLIGGLCQERRVLEAERLMCRMKRDGL 322
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P++ YN LI+G+ DKA +++M P + T+NILI+GF K
Sbjct: 323 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 382
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ REM +G +P+ V++ L+ ++ + M + G +L+ GLC
Sbjct: 383 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +L + P D Y ++ C EG++ AL ++ E+ + G +P+V
Sbjct: 443 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVA 502
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ + I L + K EA L++ M++ G+ P +N +
Sbjct: 503 SYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 324 RGVLPKDFDYFGLVEKLCGE-GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G + D FG++ K C E G EV+ ++ + G P+V+ TTLI+G +
Sbjct: 144 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
L KM + ++ + T+ L+ +G D L G+ P+ TY+ ++
Sbjct: 204 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 263
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ + L +EM + G ++ TYN+ + GL R+ + R
Sbjct: 264 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAER 312
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ IYN +I G+ K +AL M + + P+V ++N I C+++K+ A
Sbjct: 463 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEV 522
Query: 247 LFREMREKGCNPNVVSFNTLIRGFF 271
L ++M E G P++ +N + + F
Sbjct: 523 LLKDMIELGLKPSISIWNMISKARF 547
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 189/423 (44%), Gaps = 47/423 (11%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
+ +F WA F H+ T ++ + R + H N +F E
Sbjct: 86 WEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKN--------VFEPDE 137
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAM---------------RKLIDG----------- 186
+ ++ +N F KA + L F M R L G
Sbjct: 138 VS--YNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFK 195
Query: 187 ------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
P++ Y ++I+G K R+ DKA+ + +MV + PDVVT+ LI G + ++
Sbjct: 196 DMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRR 255
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCE 299
A LF E R KGC+P VV++NT+I G + + + + +M+ E + T
Sbjct: 256 VKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYS 315
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L++GL R KA EL + G P Y L++ LC G A+E+ ++
Sbjct: 316 ALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM-GV 374
Query: 360 GNL--PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
GN+ P+VI T LI+ ++ + +A L ++M +LPD+VTF +++ LC R
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRID 434
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A L + K PD + ++ +++GY + R + + L + MLD G P LATY + +
Sbjct: 435 EAHEL-FESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493
Query: 478 DGL 480
G
Sbjct: 494 TGF 496
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R+ + L ++ M + +P + Y+ LING +KA Y+ M
Sbjct: 278 YNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM 337
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERK 275
+ PDVVT+N L+ G C++ D A+ +FR+M C+PNV+++ LI F +
Sbjct: 338 LDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDR 397
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ V +A EM EGR L LP +
Sbjct: 398 LGDAVKLAKEM---------------------EGRSL--------------LPDAVTFTT 422
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++KLC E A E+ + + K P + T++ G ++ + +A L ++ML G
Sbjct: 423 VIQKLCKESRIDEAHELFESIGKTCK-PDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSG 481
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDA 419
P T+ L+ C GR DA
Sbjct: 482 CAPTLATYTALVTGFCRTGRYSDA 505
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P ++ TL+ G + +A L +M GI + N +L LC G+ A
Sbjct: 135 PDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLR-SHNIVLRGLCSGGKISMA--W 191
Query: 423 RLLASTKGL-DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ G+ P+ ++Y I++ G + + + L +M+D+ PD+ TY + +DGL
Sbjct: 192 EVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLG 251
Query: 482 NARK 485
R+
Sbjct: 252 KQRR 255
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 194/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH+ ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A +KM+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 169/362 (46%), Gaps = 36/362 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K R+ + + E M L P V YN LING + ++ + M
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENL-KLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM 363
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+KP+ VT+N+++ F + K D R+M E GC P++V++NTLI K
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + EM G + VT ++ LC E ++ +A +L+ RRG + Y L
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTL 483
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ A AL + DE+ +K +PS+I ++I GL ++ K +A ++++L+ G+
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA---------------------------------DRLR 423
+PD +T+N ++ C G+ A L+
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603
Query: 424 LLAS--TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L + +KG D D ++Y+ ++ +E R E +L+ EM ++ PD TYN+ + GL+
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLT 663
Query: 482 NA 483
+A
Sbjct: 664 DA 665
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YNV+I+GF K +A+ + M ++ PDVVT+N LI+G + + L
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G PN V++N +++ F + K DE +M E GC VT L+ C
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCK 419
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A L+ + R+G+ D ++ LC E A +++ ++G ++
Sbjct: 420 VGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS 479
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLA 426
TLI G + K +A L ++M ++ I+P +T+N ++ LC +G+T A D+L L
Sbjct: 480 YGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL 539
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ GL PD +TY+ ++ GY +E + ++ N+M+++ F PD+ T N+ + GL
Sbjct: 540 ES-GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGL 592
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 16/420 (3%)
Query: 71 PSSLLHFLKSKLHHHPQFTHYDFHIFAWAST-IDSFRHDHTTFLFIVRSLASSYRFSELH 129
P++LL F + P TH+ I +RH + +SL SS+ +
Sbjct: 49 PNTLLQFYT---YLPPSITHHSPLPLLSLLPSILRYRH-----FYAAKSLLSSFIPVDKS 100
Query: 130 SVLNFISANPCPCSNDGIFSCPEMER-IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP 188
S L+++ +P +N SC + + + ++ A+V R + F M++L +P
Sbjct: 101 SSLHYLLLHPQKTNNP--VSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRL-GMQP 157
Query: 189 SVSIYNVLINGFVK---CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
++ N L+N V+ + + ++ VK + +FNILI G C +F A+
Sbjct: 158 TLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAI 217
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ +MR+ GC P+ +++NT++ G + + +E ++ +M G + T ILV G
Sbjct: 218 RVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGC 277
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G + +A ++ S+ V+P + Y ++ C +G A+ + +E+ P V
Sbjct: 278 CRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDV 337
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ TLI G E L+E+M G+ P+SVT+N +++ G+ + D+
Sbjct: 338 VTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G PD +TY+ L+S + + + E L++EM +G D T N+ + L RK
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK 457
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 19/318 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ V FVK +M++ + +RK+ + P + YN LI+ K + D+A D
Sbjct: 375 YNVMVKWFVKKGKMDE---VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMD 431
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R +K D VT N ++ CR +K D A L R +G + VS+ TLI G+F
Sbjct: 432 EMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHE 491
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + + + EM E S +T ++ GLC G+ +A + + + G++P + Y
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYN 551
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK- 393
++ C EG A + +++ +K P V+ C TL+ GL + G++EK LK
Sbjct: 552 TIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK-------EGMLEKALKL 604
Query: 394 ------EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+G D+V++N ++ LC R +A L K L PD TY+ ++ G T
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664
Query: 448 ENRRKEGENLVNEMLDEG 465
R K+ E ++++ ++G
Sbjct: 665 AGRMKDAEEFISKIAEKG 682
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 3/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDR 215
F+ ++ NR + + MR G P +I YN +++G K ++A
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDY--GCPPDNITYNTILDGLCKKGRLNEARDLLLD 257
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+ TFNIL+ G CR A + M + P+ ++N +I GF + +
Sbjct: 258 MKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGR 317
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + EM L VT L++G G + +L+ + RG+ P Y
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+V+ +G + V ++ + G LP ++ TLI ++ K EA LM++M ++G
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D VT N +L LC + +A L A +G D ++Y L+ GY + + +
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L +EM ++ IP + TYNS + GL K+
Sbjct: 498 RLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +I+G+ + + +KA F+++MV KPDVVT N L+ G C+ + AL L
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F KG + + VS+NT+I E++F E ++ EM E T ++ GL +
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFG 335
GR+ A E + + +G F G
Sbjct: 665 AGRMKDAEEFISKIAEKGKSENQFLELG 692
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 177/403 (43%), Gaps = 18/403 (4%)
Query: 78 LKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISA 137
LK H H ++ F + SF+H T+ ++ LAS + +L +
Sbjct: 47 LKRLKHEHDITLALEY--FKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKL 104
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLI 197
CS D +F + ++ +A L F M+ +P+V IYN ++
Sbjct: 105 EGISCSED----------LFISVIGSYRRAGSSEQALKTFYRMQDF-RVKPTVKIYNHIL 153
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+ + F Y M +D ++P+V T+NIL+ C+N + D A L EM KGC+
Sbjct: 154 DALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCD 213
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P+ VS+ TLI K E +A S L++G+C E +A +L
Sbjct: 214 PDEVSYTTLISSLCKLGKVKEARELAMSFTP-----SVPVYNALINGVCKEYTFEEAFQL 268
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + +G+ P Y ++ L GN ++L V+ +++ +G P++ T+LI+G
Sbjct: 269 LDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFL 328
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
EA ++M++EG++P+ V +N L+ LC DA + G P+ T
Sbjct: 329 KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRT 388
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y L+ GY + + N M+ G P++ Y +D L
Sbjct: 389 YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVL 431
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ + LI GF +AL F+DRM+R+ V P+VV +N L+ G C + A+ +
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M GC PNV +++ LI G+ D + MI GC + V +VD LC
Sbjct: 374 FNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR 433
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+A L+ + P + ++ LCG G A++V D++ G P+
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + R+ EA GL++ M GI + VT+N ++ C G +A L
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G PD +T +I++ Y ++ + L++ + + PD+ Y S + G+
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 172/369 (46%), Gaps = 16/369 (4%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++++L + R H +L +S+ C P+ E + +++ K ++
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCD---------PD-EVSYTTLISSLCKLGKV 232
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
EA + PSV +YN LING K F++A D M+ + P+V+++
Sbjct: 233 K------EARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+I+ +L+L + +M +GC+PN+ +F +LI+GFF + E ++ MI G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ V L+ GLC++ + A + G P Y L++ G+ A
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
EV + + G P+V+A T +++ L R +A L+E M E P++VTFN ++ L
Sbjct: 407 EVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C GR A ++ G P+ TY+ L+ ++ R E LV +M G +L
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526
Query: 471 ATYNSYMDG 479
TYN+ + G
Sbjct: 527 VTYNTIIYG 535
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 5/299 (1%)
Query: 170 MNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ D + F M I+G P+V Y+ LI+G+ K + D A ++ M+ P+VV +
Sbjct: 367 LGDAVSVFNQME--INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++ CRN F+ A L M+ + C PN V+FNT I+G G + D + + +M
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC ++ T L+D L + R +A LV D RG+ Y ++ C G G
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
ALE++ ++ +G P I +I+ + K A LM+++ PD + + L+
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Query: 409 DLCD-VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+C +G LR + S +G+ P+ T+++LV ++ +L GF
Sbjct: 605 GICTHIGVEEAIVYLRRMLS-EGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 5/288 (1%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+I + + ++AL + RM RVKP V +N ++ +F + ++ M++ G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
PNV ++N L++ + D + EM GC+ V+ L+ LC G+V +A
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
EL + F+ P Y L+ +C E A +++DE+ KG P+VI+ TT+I L
Sbjct: 237 ELAMSFT-----PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ ++ KM G P+ TF L++ G + +A +G+ P+
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ Y+ L+ G + + ++ N+M G P++ TY++ +DG + A
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 10/318 (3%)
Query: 171 NDGLLAFEAMRKLIDGRP---SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+D LA E + + + + + Y ++I RE D +M + +
Sbjct: 54 HDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDL 113
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE-M 286
F +I + R + AL F M++ P V +N ++ E +F + +N Y M
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF-QMINPIYSNM 172
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ G E + T IL+ LC RV A +L+++ S +G P + Y L+ LC G
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A E+ PSV LI G+ + EA L+++M+ +GI P+ +++ +
Sbjct: 233 KEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ L D G + + +G P+ T+ L+ G+ + E + + M+ EG
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Query: 467 IPDLATYNSYMDGLSNAR 484
+P++ YN+ M GL + R
Sbjct: 348 VPNVVAYNALMHGLCSKR 365
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++EKL E ++ ++ +G S ++I RR +A +M
Sbjct: 79 YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQ 138
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P +N +L+ L D R + + G++P+ TY+IL+ + NR
Sbjct: 139 DFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVD 198
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ EM +G PD +Y + + L K V++ R
Sbjct: 199 GAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK-VKEAR 236
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 199/441 (45%), Gaps = 29/441 (6%)
Query: 52 HLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTT 111
HLLR LK PS + L+S+ + F WA + H
Sbjct: 156 HLLRSLK------------PSLVCAVLRSQADERVAL-----NFFYWADRQWRYSHHPLV 198
Query: 112 FLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
+ ++ L+ + VL ++ GI PE F + ++ +A ++
Sbjct: 199 YYTLLDVLSKTKLCQGARRVLRLMTRR-------GIELSPEA---FGCVMVSYSRAGKLR 248
Query: 172 DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+ L M+K P++SI N I VK + +KAL F +RM +KPD+VT+N L
Sbjct: 249 NALRVLTLMQK-AGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSL 307
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I G+C + + AL L + KGC P+ VS+ T++ E+K ++ + +M++
Sbjct: 308 IKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSN 367
Query: 292 EF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
VT L+ L G A + + +G Y +V C +G A
Sbjct: 368 LIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAK 427
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+V +++ + P V+ T +++G RL + EA ++++M K G P++V++ LL L
Sbjct: 428 SLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGL 487
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G++++A + ++ P+ +TY +++ G+ RE + E +L EM+++GF P
Sbjct: 488 CHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTP 547
Query: 471 ATYNSYMDGLSNARKSVRQTR 491
N + L +K V +
Sbjct: 548 VEINLLIQSLCQNQKVVEAKK 568
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 2/329 (0%)
Query: 150 CPEMERIFHFAVNAFV-KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
CP +++ ++ V F+ K ++ E M + + P YN LI+ K D
Sbjct: 332 CPP-DKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADD 390
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL F D V ++ ++ FC+ + D A L +M + CNP+VV++ ++
Sbjct: 391 ALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVD 450
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
GF + DE M +M + GC+ ++V+ L++GLC+ G+ L+A E++ P
Sbjct: 451 GFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTP 510
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y ++ EG A ++ E+ +KG P+ + LI+ L + +K VEA +
Sbjct: 511 NAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYL 570
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E+ L +G + V F ++ C +G A + PD +TY L ++
Sbjct: 571 EECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKK 630
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYM 477
R E L+ +ML +G P T+ S +
Sbjct: 631 GRLDEAAELIVKMLSKGLDPTPVTFRSVI 659
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 155/333 (46%), Gaps = 18/333 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS-------VSIYNVLINGFV-KCREFDK 208
++ + + NR+ D L +LI G PS VS Y V+ GF+ K ++ ++
Sbjct: 304 YNSLIKGYCDLNRIEDAL-------ELIAGLPSKGCPPDKVSYYTVM--GFLCKEKKIEQ 354
Query: 209 ALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
++MV+D + PD VT+N LI ++ D AL +E +KG + + V ++ ++
Sbjct: 355 VKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIV 414
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
F + + DE ++ +M C VT +VDG C GR+ +A +++ + G
Sbjct: 415 HSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCK 474
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ LC G + A E+++ + P+ I ++ G RR K EA L
Sbjct: 475 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDL 534
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+M+++G P V N L++ LC + V+A + KG + + + ++ G+ +
Sbjct: 535 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 594
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +++ +M PD TY + D L
Sbjct: 595 IGDMEAALSVLEDMYLSNKHPDAVTYTALFDAL 627
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 13/324 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID-----GRPSVSIYNVLINGFVKCREFDKALGFYDR 215
V++F + RM+ EA +ID P V Y +++GF + D+A +
Sbjct: 414 VHSFCQKGRMD------EAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQ 467
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + KP+ V++ L++G C + K A + E PN +++ ++ GF E K
Sbjct: 468 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGK 527
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E ++ EM+E G + V +L+ LC +V++A + + + +G ++
Sbjct: 528 LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTT 587
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C G+ AL V+++++ P + T L + L + + EA+ L+ KML +G
Sbjct: 588 VIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKG 647
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P VTF ++ C GR VD D L LL P Y+ ++ +E E
Sbjct: 648 LDPTPVTFRSVIHRYCQWGR-VD-DMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAE 705
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
L+ ++L D T + M+
Sbjct: 706 KLLGKVLRTASKLDANTCHVLMES 729
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 157/402 (39%), Gaps = 52/402 (12%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
+Q+T ++L+H L H H D F + F D + IV S R
Sbjct: 371 DQVTYNTLIHMLSK--HGHAD----DALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMD 424
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK---- 182
E S++ I C+ D + + V+ F + R+++ + M K
Sbjct: 425 EAKSLV--IDMYSRSCNPDVV--------TYTAIVDGFCRLGRIDEAKKMLQQMYKHGCK 474
Query: 183 --------LIDG----------------------RPSVSIYNVLINGFVKCREFDKALGF 212
L++G P+ Y V+++GF + + +A
Sbjct: 475 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDL 534
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
MV P V N+LI C+N+K A E KGC NVV+F T+I GF
Sbjct: 535 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 594
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ +++ +M +VT L D L +GR+ +A EL++ +G+ P
Sbjct: 595 IGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 654
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ ++ + C G L ++D + K+ ++ +IE L EA L+ K+L
Sbjct: 655 FRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIY--NHVIEKLCDFGNLEEAEKLLGKVL 712
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ D+ T + L+E G + A ++ + L PD
Sbjct: 713 RTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPD 754
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 166/373 (44%), Gaps = 42/373 (11%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
G ++C ++ ++ K R+ D LL R L+ P+ + YN+L+ G+ K
Sbjct: 235 GKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLL---PNRNTYNILVYGYCKM 291
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+A + M ++ + PDV T+N+LI+G C + + A L EM P+VVS+
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NTLI G K E + EM E G + ++VT I+V C EG++ A +
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G P Y L+ C GN G A +DE+ +K + T++ L R +K E
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEE 471
Query: 384 ASGLMEKMLKEG-----------------------------------ILPDSVTFNCLLE 408
A L+ K G I+P +VT+NC++
Sbjct: 472 AYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIG 531
Query: 409 DLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G+T A +L L + GL PD TY+ ++ GY RE ++ N+M++ F
Sbjct: 532 GLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 468 PDLATYNSYMDGL 480
PD+ T N + GL
Sbjct: 591 PDVFTCNILLRGL 603
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N R+ + + M L P V YN LING ++ + +A + M
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VKP+ VT NI++ +C+ K D A +M E G +P+ V++NTLI G+
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E EM + SVT ++ LC E ++ +A +L+ +RG + Y L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +GN AL++ DE+ +K +PS + +I GL + K +A + ++L+ G+
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD T+N +L C G A + PD T +IL+ G E ++
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L N + +G D TYN+ + L
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSL 638
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 200/427 (46%), Gaps = 14/427 (3%)
Query: 68 QITPSSLLHFLKSK-LHHHPQFTHYDFHIFAWAST-IDSFRHDHTTFLFIVRSLASSYR- 124
+TP +L L SK L P F WA T + +F H+ L + S+R
Sbjct: 47 HLTPPLVLSILSSKTLISRPNIL---ISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRK 103
Query: 125 FSELHSVL-NFISANPCPCSNDGIFSCPEMER-IFHFAVNAFVKANRMNDGLLAFEAMRK 182
FS+ S+L FI+ + + I + + A+ A+V++ + + F+ M++
Sbjct: 104 FSDAKSLLLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGFCRN 238
L RP++ N L+N V+ ++ F D +K P+V TFNI+I G+C
Sbjct: 164 L-RLRPNLLTCNTLLNSLVRYPS-SHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLE 221
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
KF A+ M + C+P+ V++NT++ + + + ++ +M G + T
Sbjct: 222 NKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTY 281
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
ILV G C G + +A ++ ++ +LP + Y L+ LC EG A ++ DE+
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
LP V++ TLI G K EA L+E+M ++G+ P++VT N +++ C G+ D
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A G PD +TY+ L++GY + E ++EM + D T N+ +
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 479 GLSNARK 485
L +K
Sbjct: 462 TLCREKK 468
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 50/355 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N ++ +++++ E M + +P+ +N+++ + K + D A +M
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKMDDASNTITKM 409
Query: 217 VRDRVKPDVVTFNILISGF-----------------------------------CRNKKF 241
PD VT+N LI+G+ CR KK
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL 469
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ A L R++G + VS+ TLI G+F + D + + EM E S+VT +
Sbjct: 470 EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCI 529
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GLC G+ +A + + G+LP + Y ++ C EG+ A + +++ +
Sbjct: 530 IGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSF 589
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-------EGILPDSVTFNCLLEDLCDVG 414
P V C L+ GL G++EK LK +G D+VT+N L+ LC G
Sbjct: 590 KPDVFTCNILLRGLC-------MEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
R DA L K L PD TY+ +++ T R +E E +++ML++G +PD
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 1/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + + N+ D + M K + P YN +++ K A M
Sbjct: 211 FNIVIYGYCLENKFKDAVEFLNVMGKY-NCSPDNVTYNTILDTLCKKGRLGDARDLLMDM 269
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ T+NIL+ G+C+ A + M + P+V ++N LI G E +
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRI 329
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM L V+ L++G ++ +A +L+ + S +GV P + +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ C EG A + ++ + G P + TLI G + EA M++M ++ +
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
DSVT N +L LC + +A +L A +G D ++Y L+ GY ++
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L +EM ++ IP TYN + GL K+
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 12/297 (4%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI G+ K D+AL +D M + P VT+N +I G C+ K + A+ E+
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G P+ ++NT++ G+ E ++ +M+E + TC IL+ GLC EG +
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA +L + +G Y L+ LC EG A ++ E+ +K P +I
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + EA M KML++G LPD V D TV + + +
Sbjct: 671 TALTDSGRIREAEEFMSKMLEKGNLPDQVL-------QLDKNETVVTSETSEESDSSSV- 722
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
Y + E + K+ + E +G D +TY + MDGL RKS+ +
Sbjct: 723 ----AYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISK 775
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 156/305 (51%), Gaps = 4/305 (1%)
Query: 182 KLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
K+I RP SI ++ +++ K + +D + + M + D+ ++NI+I+ CR
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEMIELGCEFSSVTC 298
+F +AL + +M + G P+VV+ ++LI GF G R FD +++ +M E+G V
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIY 177
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
++DG C G V A EL R GV Y LV LC G A ++ ++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+ +P+VI T +I+ + K EA L E+M + + PD T+N L+ LC GR +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ L TKG PD +TY+ L++G+ + R EG L EM G + D TYN+ +
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 479 GLSNA 483
G A
Sbjct: 358 GYFQA 362
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 33/340 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + NR+ D + M ++ RP V IYN +I+G K + A+ +DRM RD
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEM-GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+ D VT+N L++G C + ++ A L R+M + PNV++F +I F E KF E +
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM + T L++GLC GRV +A +++ +G LP Y L+
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR----------------------- 377
C ++ E+ ++G + I T+I+G +
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Query: 378 --LRKGV-------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L G+ +A L E M K I D T+N ++ +C +G DA L S
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
KGL PD ++Y ++SG+ R+ + + + L +M ++G +P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 5/289 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR-NKKFDLALGLFREM 251
YN++IN +C F AL +M++ +PDVVT + LI+GFC+ N+ FD A+ L +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKM 165
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E G P+VV +NT+I G ++ V + M G +VT LV GLC GR
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A L+ D R ++P + +++ EG A+++ +E+ ++ P V +L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL + EA +++ M+ +G LPD VT+N L+ C R + +L + +GL
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ ++ GY + R + + + M P++ TY+ + GL
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 142/280 (50%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
++ + + +M++ R P +V F+ ++S ++K +DL + LF M G ++ S+N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I +F +++ +M++ G E VT L++G C RV A +LV G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y +++ C G A+E+ D + + G + +L+ GL + +A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
LM M+ I+P+ +TF +++ G+ +A +L + + +DPD TY+ L++G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R E + +++ M+ +G +PD+ TYN+ ++G +++
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + +R L M K P V + LINGF + A+ +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDVV +N +I G C+ + A+ LF M G + V++N+L+ G ++
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +M+ + +T ++D EG+ +A +L + +RR V P F Y L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++D + KG LP V+ TLI G + ++ E + L +M + G+
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ D++T+N +++ GR D + + S P+ TY IL+ G R ++
Sbjct: 346 VGDTITYNTIIQGYFQAGR---PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L M D+ TYN + G+
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGM 426
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + +A R + F M D RP++ Y++L+ G +KAL ++ M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++ D+ T+NI+I G C+ + A LFR + KG P+VVS+ T+I GF +R++
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 277 DEGVNMAYEMIELG 290
D+ + +M E G
Sbjct: 468 DKSDLLYRKMQEDG 481
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 174/374 (46%), Gaps = 47/374 (12%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFE-AMRKLIDGRPSVSIYNVLINGFVKCRE 205
+FSC + A++ + NR + L F AM ++ P+ Y +LI GF +
Sbjct: 22 VFSC-------NCALDMLCRLNRRQEALALFRNAMARIC--MPNKFTYGILIRGFSSAGD 72
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D A+ + M + + V L+ G C + AL FR M K C P+V+++
Sbjct: 73 LDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTA 131
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ KFDE M EM+ GC +VT L+DGLC G +A ++ D +RG
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191
Query: 326 VLPKDFDYFGLVEKLCGEGNA--------GI----------------------------A 349
+ D + ++++LC + N+ G+ A
Sbjct: 192 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 251
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++++ + +KG +P+V T LI GL + + EA L+EKM+ G P+ VT++ ++
Sbjct: 252 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVING 311
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G+ DA L L + P+ +T++IL+ G + R +E L + M + G PD
Sbjct: 312 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 371
Query: 470 LATYNSYMDGLSNA 483
+ TYNS +DGL +
Sbjct: 372 IITYNSLIDGLCKS 385
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 39/354 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A R+ + L F AM K D P V Y L++ K +FD+A G MV
Sbjct: 99 MKGLCDAGRVVEALEHFRAMAK--DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQG 156
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKG---------------CN-------- 257
PD VTF+ LI G C+ + A + ++ ++G CN
Sbjct: 157 CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELA 216
Query: 258 -------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
P V+ FN +I GF + D + MIE GC + T IL+ G
Sbjct: 217 SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITG 276
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC RV +A +L+ G P Y ++ LC +G A E+ + ++ P+
Sbjct: 277 LCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 336
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ LI+GL + ++ EA L +M + G PD +T+N L++ LC + +A +L
Sbjct: 337 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 396
Query: 425 LASTKGLD-PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
G+ + +TY L GY R + + + ++D+GF PDLATY S +
Sbjct: 397 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 44/370 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F + KANR+ + A + + K++ G P+V Y+ +ING K + D A +
Sbjct: 270 FTILITGLCKANRVGE---AQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 326
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R P+VVT NILI G C+ K+ + A L+ MRE GC P+++++N+LI G
Sbjct: 327 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386
Query: 275 KFDEGVNMAYEMIELGCEFS-SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE + + E G + +VT L G GR+ AC + +G P Y
Sbjct: 387 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 446
Query: 334 FGLVEKLCG----------------------------------EGN-AGIALEVVDELWK 358
L+ + C EGN A+++ D +
Sbjct: 447 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 506
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE---GILPDSVTFNCLLEDLCDVGR 415
+G + ++EG+ R K +A ++E+++ + P S + L+E LC VG+
Sbjct: 507 RGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGK 566
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
T DA +L S +G +Y+ L+SG +R R E + M+ G P+++T N
Sbjct: 567 TDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 626
Query: 476 YMDGLSNARK 485
+ L +A K
Sbjct: 627 VISWLCSAAK 636
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 178/408 (43%), Gaps = 34/408 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-------DGIFSCPEMERIFHFA 160
D T+ +V +L + +F E +L + A C DG+ E+ F
Sbjct: 125 DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 184
Query: 161 VNAFVKA----------------NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVK 202
+ + N+ N LA + + +I P+V ++N++INGF K
Sbjct: 185 EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 244
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
++ D A + M+ P+V TF ILI+G C+ + A L +M GC+PNVV+
Sbjct: 245 AKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVT 304
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIEL----GCEFSSVTCEILVDGLCNEGRVLKACELV 318
++T+I G + + D+ AYE+ +L C + VT IL+DGLC R+ +A +L
Sbjct: 305 YSTVINGLCKQGQVDD----AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRR 377
G P Y L++ LC A ++ + + G + + + +TL G
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 420
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
L + +A + ++ +G PD T+ L+ + C R V+ L ++KG P T
Sbjct: 421 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 480
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ G N + L + M G D YN ++G++ A K
Sbjct: 481 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 134/275 (48%), Gaps = 3/275 (1%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F+D R RV +V + N + CR + AL LFR + C PN ++ LIRGF
Sbjct: 10 FFD-WARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
D + + EM G E ++V L+ GLC+ GRV++A E + + P
Sbjct: 69 SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVM 127
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y LV LC G A ++ E+ +G P + +TLI+GL + +A ++E +
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
++ G+ F +++ LC+ +V+ A ++ + KG P + ++++++G+ +
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ M+++G +P++ T+ + GL A +
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR 282
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 141/321 (43%), Gaps = 3/321 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K+ ++++ F+ + + + Y+ L +G+ A + +
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD+ T+ LI +C+ + + L EM KG P V + + ++ G F
Sbjct: 435 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 494
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR---VLKACELVIDFSRRGVLPKDFDY 333
+ + + M GC ++ ++V+G+ + L E VID R P
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LVE LC G A +++ ++ ++G +V + L+ GL RL++ EA+ + E M+
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P+ T N ++ LC + DA L S G PD T + L+ GY + R
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674
Query: 454 GENLVNEMLDEGFIPDLATYN 474
L+ EM + G P+ T++
Sbjct: 675 ARKLLEEMTEAGLEPNDTTHD 695
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 17/339 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L S++ E + I + +N +S +FH +
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS-----TLFH----GYAAL 421
Query: 168 NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
RM D F L+D P ++ Y LI + K + + + M P V
Sbjct: 422 GRMADACRIFSM---LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRV 478
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T + ++ G + A+ LF M +GC + + +N ++ G K D+ + + +
Sbjct: 479 NTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQ 538
Query: 286 MIE-LGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+I+ +F SS + LV+ LC G+ A +L+ S RG Y L+ L
Sbjct: 539 VIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSR 598
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A +V + + G P + +I L K +A L+++M K G PD T
Sbjct: 599 LQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIET 658
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
N L+ C GR A +L + GL+P+ T+ +L
Sbjct: 659 CNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+C +D LC R +A L + R +P F Y L+ G+ IA+++++E+
Sbjct: 24 SCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM 83
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
G + + TTL++GL + VEA M K+ PD +T+ L+ LC G+
Sbjct: 84 KSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKF 142
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A + +G PD +T+ L+ G + ++ ++ +++ G A + +
Sbjct: 143 DEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI 202
Query: 477 MDGLSNARKSV 487
+ L N SV
Sbjct: 203 IQRLCNKYNSV 213
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 185/401 (46%), Gaps = 12/401 (2%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANP-----CPCSN--DGIF 148
F WA + FRH ++ IV + + +++ H + + N P N D ++
Sbjct: 91 FKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLW 150
Query: 149 S----CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
S C +F + FV+ + + F MR P N L++ K
Sbjct: 151 STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNF-RTLPKARSCNFLLHRLSKSG 209
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
F++ M+ + P V T+N++I C+ + + LF +MRE G +P+VV++N
Sbjct: 210 NGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYN 269
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ +E ++ EM ++GC +T L++ C ++ +A E +
Sbjct: 270 SLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN 329
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG A++++ ++ + G LP+ T+LI+ + EA
Sbjct: 330 GLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 389
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ ML+ G+ + VT+ LL+ LC GR ++A+ + G+ P+ Y LV G
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y + R ++ ++ +M + PDL Y S + G + RK
Sbjct: 450 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 36/330 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K + + F MR++ P V YN LI+G+ K ++ ++ M
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFVQMREM-GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PD++T+N LI+ +C+ +K A F EM+ G PNVV+++TLI
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI--------- 342
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D C EG + A +L+ D R G+LP +F Y L
Sbjct: 343 --------------------------DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSL 376
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN A ++++++ + G +++ T L++GL + + +EA + MLK+GI
Sbjct: 377 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 436
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ + L+ R DA ++ + + PD + Y ++ G+ + + +E +
Sbjct: 437 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 496
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ EM G + + +D A KS
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKS 526
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 11/306 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ KA RM + F +M K DG P+ +Y L++G++K + A+ +M
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLK--DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 469
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+KPD++ + +I G C +K + + EM+ +G + N V T+I +F K +
Sbjct: 470 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR----GVLPKDFDYFG 335
+N EM ++G E + VT +L+DGLC G V EL +D+ R G+ P Y
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV----ELAVDYFCRMLSLGLQPNVAVYTS 585
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC A ++ DE+ +G P + A T LI+G + EA L+ +M +
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I D + L+ G A + KG+ P+ + L+ Y + + E
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705
Query: 456 NLVNEM 461
L NEM
Sbjct: 706 ELKNEM 711
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 35/327 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LIN + K + +A ++ M + +KP+VVT++ LI FC+ A+ L
Sbjct: 298 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 357
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+MR G PN ++ +LI E + +M++ G + + VT L+DGLC
Sbjct: 358 LXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 417
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLV------EKL--------------------- 340
GR+++A E+ + G+ P Y LV E++
Sbjct: 418 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 477
Query: 341 --------CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
C + +++E+ +G + + TT+I+ + K +A ++M
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G+ VT+ L++ LC+ G A + GL P+ Y L+ G N +
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIE 597
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L +EM G PD+ + + +DG
Sbjct: 598 SAKKLFDEMQCRGMTPDITAFTALIDG 624
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 137/323 (42%), Gaps = 3/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF K M + MR+ P+ Y LI+ K +A + M++
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRR-TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
VK ++VT+ L+ G C+ + A +FR M + G +PN + L+ G+ + ++ +
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEK 339
+ +M E + + ++ G C++ R L+ +L+++ RG+ +++
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQ-RKLEETKLILEEMKSRGISANPVISTTIIDA 519
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
G + AL E+ G +++ LI+GL A +ML G+ P+
Sbjct: 520 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPN 579
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ L++ LC A +L +G+ PD + L+ G + +E L++
Sbjct: 580 VAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 639
Query: 460 EMLDEGFIPDLATYNSYMDGLSN 482
M + DL Y S + G S
Sbjct: 640 RMTELAIEFDLHVYTSLVSGFSQ 662
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 172 DGLL---AFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
DGL E+ +KL D P ++ + LI+G +K +AL RM ++
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D+ + L+SGF + + A F EM EKG P V L+R ++ + DE + +
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707
Query: 283 AYEMIELGCEF 293
EM + F
Sbjct: 708 KNEMERMAYSF 718
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 188/408 (46%), Gaps = 13/408 (3%)
Query: 78 LKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISA 137
+ S L P T F +F W+ R T I+ L F VL +
Sbjct: 64 ITSVLQEQPD-TRLGFRLFIWSLKSWHLRC-RTVQDLIIGKLIKENAFELYWKVLQELKN 121
Query: 138 NPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLI 197
+ S++ F + A+ +A + +F MR D +P + +N+++
Sbjct: 122 SAIKISSEA----------FSVLIEAYSEAGMDEKAVESFGLMRDF-DCKPDLFAFNLIL 170
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+ V+ F AL Y++M++ + PDVVT+ ILI G C+ K AL LF EM ++G
Sbjct: 171 HFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGIL 230
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN + ++ ++ G +K + + +M GC +T +L++G C G + A L
Sbjct: 231 PNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL 290
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ ++ G + Y L+ L A ++ ++ P V+ T +I GL +
Sbjct: 291 LQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA L+ +M + G+ PD++ +N L++ CD+G +A+ LRL S P+ T
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y IL+ G + + +++ EM G +P + T+NS ++GL A +
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 14/344 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++ +A ++ D F MR R ++ YNVL+NGF K D A
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT-YNVLLNGFCKSGYLDDAFTLLQL 293
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +D V+ + LI+G R ++++ A +++M + P+V+ + +IRG E +
Sbjct: 294 LTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGR 353
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + EM E G ++ L+ G C+ G + +A L ++ S+ P + Y
Sbjct: 354 VTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSI 413
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM---- 391
L+ +C G A + E+ K G LPSV+ +LI GL + + EA L +M
Sbjct: 414 LICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVR 473
Query: 392 -------LKEGI--LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
L +G + D + ++E LC+ G + A +L + G+ PD TY+IL+
Sbjct: 474 KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILI 533
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+G+ + L EM +G +PD TY + +DGL A ++
Sbjct: 534 NGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRN 577
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 148/323 (45%), Gaps = 36/323 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP YN LI GF D+A + + P+ T++ILI G C+N + A
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQH 429
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-----------IELGCE--F 293
+F+EM + GC P+VV+FN+LI G + +E + Y+M + G + F
Sbjct: 430 IFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVF 489
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ +++++ LC G +LKA +L++ GVLP Y L+ C GN A ++
Sbjct: 490 DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLF 549
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG++P + TLI+GL R + +A + E+M+K+G +P+S T+ ++ C
Sbjct: 550 KEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC-- 607
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP----- 468
+ + L S M Y G+ E R E+ NE L
Sbjct: 608 ----RENNISLALSV------WMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMD 657
Query: 469 ------DLATYNSYMDGLSNARK 485
DLA Y ++ GL A++
Sbjct: 658 IKSKNFDLAPYTIFLIGLVQAKR 680
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 168/314 (53%), Gaps = 5/314 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++D + F M K RP SI+ N L++ K ++FD + ++M R + ++
Sbjct: 65 KLDDAIGLFGGMVK---SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+NILI+ FCR + LAL L +M + G P++V+ ++L+ G+ ++ + V + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+G ++T L+ GL + +A LV +RG P Y +V LC G+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+A +++++ +V+ +T+I+ L + R +A L +M +G+ P+ +T++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ R DA RL + ++P+ +T++ L+ + +E + E E L +EM+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 467 IPDLATYNSYMDGL 480
PD+ TY+S ++G
Sbjct: 362 DPDIFTYSSLINGF 375
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ +M E + V ++D LC A L + +GV P Y L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ ++ ++ P+V+ LI+ + K VEA L ++M+K I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L++G+ + R EG
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM G + + TY + + G AR
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLA L +M NVV ++T+I R D+ +
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + +T L+ LCN R A L+ D R + P + L++
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ C R + L S +GL + +TY L+ G+ + + + +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G P++ TYN+ +DGL
Sbjct: 461 MVSDGVHPNIMTYNTLLDGL 480
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 1/317 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ +++ K +D L F M RP+V Y+ LI+ + A
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++ P+VVTFN LI F + K A L+ EM ++ +P++ ++++LI GF +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE +M MI C + VT L++G C R+ + EL + S+RG++ Y
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + A V ++ G P+++ TL++GL + K +A + E + +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E +
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 456 NLVNEMLDEGFIPDLAT 472
L +M ++G +PD T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 181/387 (46%), Gaps = 17/387 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+R D TF ++ L + SE ++++ + C P + + VN
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ---------PNLV-TYGVVVNGL 235
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K ++ LAF + K+ + +V IY+ +I+ K R D AL + M V+
Sbjct: 236 CKRGDID---LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+V+T++ LIS C +++ A L +M E+ NPNVV+FN LI F E K E +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI+ + T L++G C R+ +A + + P Y L+ C
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ E+ ++G + + + TTLI G + R A + ++M+ +G+ P+ +T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N LL+ LC G+ A + ++P TY+I++ G + + ++G +L +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQ 489
+G PD+ YN+ + G RK +++
Sbjct: 533 LKGVKPDVIIYNTMISGF--CRKGLKE 557
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 184/401 (45%), Gaps = 12/401 (2%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANP-----CPCSN--DGIF 148
F WA + FRH ++ IV + + +++ H + + N P N D ++
Sbjct: 150 FKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLW 209
Query: 149 S----CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
S C +F + FV+ + + F MR P N L++ K
Sbjct: 210 STRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNF-RTLPKARSCNFLLHRLSKSG 268
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
F++ M+ + P V T+N++I C+ + + LF +MRE G +P+VV++N
Sbjct: 269 NGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYN 328
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ +E ++ EM ++GC +T L++ C ++ +A E +
Sbjct: 329 SLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNN 388
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG A+++ ++ + G LP+ T+LI+ + EA
Sbjct: 389 GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEA 448
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ ML+ G+ + VT+ LL+ LC GR ++A+ + G+ P+ Y LV G
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y + R ++ ++ +M + PDL Y S + G + RK
Sbjct: 509 YIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 36/330 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K + + F MR++ P V YN LI+G+ K ++ ++ M
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREM-GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PD++T+N LI+ +C+ +K A F EM+ G PNVV+++TLI
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI--------- 401
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D C EG + A +L +D R G+LP +F Y L
Sbjct: 402 --------------------------DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSL 435
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN A ++++++ + G +++ T L++GL + + +EA + MLK+GI
Sbjct: 436 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ + L+ R DA ++ + + PD + Y ++ G+ + + +E +
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ EM G + + +D A KS
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKS 585
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 11/317 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ KA RM + F +M K DG P+ +Y L++G++K + A+ +M
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLK--DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 528
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+KPD++ + +I G C +K + + EM+ +G + N V T+I +F K +
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR----GVLPKDFDYFG 335
+N EM ++G E + VT +L+DGLC G V EL +D+ R G+ P Y
Sbjct: 589 LNFFQEMQDVGVEATIVTYCVLIDGLCKAGIV----ELAVDYFCRMLSLGLQPNVAVYTS 644
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC A ++ DE+ +G P + A T LI+G + EA L+ +M +
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I D + L+ G A + KG+ P+ + L+ Y + + E
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764
Query: 456 NLVNEMLDEGFIPDLAT 472
L NEM G I + AT
Sbjct: 765 ELKNEMERMGLITESAT 781
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 141/327 (43%), Gaps = 35/327 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LIN + K + +A ++ M + +KP+VVT++ LI FC+ A+ L
Sbjct: 357 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 416
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +MR G PN ++ +LI E + +M++ G + + VT L+DGLC
Sbjct: 417 FVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLV------EKL--------------------- 340
GR+++A E+ + G+ P Y LV E++
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLIL 536
Query: 341 --------CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
C + +++E+ +G + + TT+I+ + K +A ++M
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G+ VT+ L++ LC G A + GL P+ Y L+ G + N +
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIE 656
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L +EM G PD+ + + +DG
Sbjct: 657 SAKKLFDEMQCRGMTPDITAFTALIDG 683
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 139/323 (43%), Gaps = 3/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF K M + F MR+ P+ Y LI+ K +A + M++
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRR-TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
VK ++VT+ L+ G C+ + A +FR M + G +PN + L+ G+ + ++ +
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEK 339
+ +M E + + ++ G C++ R L+ +L+++ RG+ +++
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQ-RKLEETKLILEEMKSRGISANPVISTTIIDA 578
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
G + AL E+ G +++ LI+GL + A +ML G+ P+
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ L++ LC A +L +G+ PD + L+ G + +E L++
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698
Query: 460 EMLDEGFIPDLATYNSYMDGLSN 482
M + DL Y S + G S
Sbjct: 699 RMTELAIEFDLHVYTSLVSGFSQ 721
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 172 DGLL---AFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
DGL E+ +KL D P ++ + LI+G +K +AL RM ++
Sbjct: 647 DGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 706
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D+ + L+SGF + + A F EM EKG P V L+R ++ + DE + +
Sbjct: 707 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766
Query: 283 AYEMIELGCEFSSVTCE 299
EM +G S T +
Sbjct: 767 KNEMERMGLITESATMQ 783
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 184/431 (42%), Gaps = 55/431 (12%)
Query: 88 FTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL-------------NF 134
FT F F W R + +V +LA S FS+ L
Sbjct: 115 FTALSF--FNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSED 172
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
+ N C+ D C +F V A+++ R+ +GL +F M + + P+V N
Sbjct: 173 VFKNLILCTED----CNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLR-VGFVPTVITSN 227
Query: 195 VLINGFVKCREFDKALGFYDRMVR-----------------------------------D 219
L+NG +K D+ Y+ M R +
Sbjct: 228 YLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEE 287
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PD+VT+N LI+ +CR + D A L++ M +G P++VS+ L+ G E + E
Sbjct: 288 GFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREA 347
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M+ G VT L+ G C EG++ ++ L+ D G+ P F + LVE
Sbjct: 348 HQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEG 407
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG AL +V EL + G S + LI L R + A L+E+M K+G P+
Sbjct: 408 YGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPE 467
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+N L++ C +A L++ K + P+ TY ++ +R +R EGE+LV
Sbjct: 468 LEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVG 527
Query: 460 EMLDEGFIPDL 470
EM+ G +PDL
Sbjct: 528 EMVASGMLPDL 538
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 121/320 (37%), Gaps = 75/320 (23%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N++ + R++D ++ M R ++ P + Y L+NG K +A +
Sbjct: 296 YNTLINSYCRKGRLDDAFYLYKIMYRRGVV---PDLVSYTALMNGLCKEGRVREAHQLFH 352
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RMV + PD+VT+N LI G+C+ K + L +M G +P+ + L+ G+ E
Sbjct: 353 RMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEG 412
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
KF +N+ E+ G S L+ LC E R A L+ S+ G P+ Y
Sbjct: 413 KFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYN 472
Query: 335 GLVEKLCGEGNAGIAL----EVVD-------------------------------ELWKK 359
L++ C AL E+VD E+
Sbjct: 473 ELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVAS 532
Query: 360 GNLPSVIACTTLIEGLRR----------------------------LRKGVEASG----- 386
G LP + C L G R L + A G
Sbjct: 533 GMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARS 592
Query: 387 --LMEKMLKEGILPDSVTFN 404
+ + MLK G+LP+ +T N
Sbjct: 593 LEIQDMMLKMGLLPNPLTCN 612
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 189 SVSIYNVLINGFVKCREFD--KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
S IY+ LI CRE A +RM +D KP++ +N LI FC+ AL
Sbjct: 432 SQDIYSYLIVAL--CRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALL 489
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM +K PN+ ++ +I + EG ++ EM+ G C L G C
Sbjct: 490 LKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYC 549
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E + KA L+ F++ + + L+ +G+ +LE+ D + K G LP+ +
Sbjct: 550 RENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPL 609
Query: 367 ACTTLIEGLRRLRKGVEASGL 387
C RLR V+A+ +
Sbjct: 610 TCNPFAILTSRLRVDVKAANM 630
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 142/274 (51%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D A Y+ MV ++P VVT+N ++ FC+ K AL L +M++ GC PN V++N
Sbjct: 171 IDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNV 230
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G + ++ + EM+ LG E S+ T + L+ G C +G++ +A L + RG
Sbjct: 231 LVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG 290
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P Y ++ LC G A +++D + K +P +++ TLI G RL EA
Sbjct: 291 AVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAF 350
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ G++P VT+N L++ LC +G A RL+ G DPD T+ ILV G+
Sbjct: 351 LLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGF 410
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + L +EML+ G PD Y + + G
Sbjct: 411 CKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 161/323 (49%), Gaps = 13/323 (4%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+A+R+ + +L+ A+ P++ YN ++ G K A D MV + PD+
Sbjct: 278 EASRLGEEMLSRGAV-------PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDL 330
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
V++N LI G+ R A LF E+R +G P+VV++NTLI G D + + E
Sbjct: 331 VSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDE 390
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE-- 343
MI+ G + T ILV G C G + A EL + RG+ P D F + ++ GE
Sbjct: 391 MIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQP---DRFAYITRIVGELK 447
Query: 344 -GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G+ A + +E+ +G P +I I+GL +L EAS L++KML G++PD VT
Sbjct: 448 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 507
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ ++ G A + L +KG+ P +TY +L+ Y R K EM
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
++G P++ TYN+ ++GL RK
Sbjct: 568 EKGVHPNVITYNALINGLCKVRK 590
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 7/333 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR--KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + + + L F +R L+ PSV YN LI+G + + D A+ D
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLV---PSVVTYNTLIDGLCRMGDLDVAMRLKD 389
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ PDV TF IL+ GFC+ +A LF EM +G P+ ++ T I G
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ M EM+ G +T + +DGL G + +A ELV G++P Y
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR-RLRKGVEASGLMEKMLK 393
++ G+ A V E+ KG PSV+ T LI R R + E M +
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE-MHE 568
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ P+ +T+N L+ LC V + A + KG+ P+ TY IL++ +E
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQE 628
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L +MLD PD T+++ + L+ KS
Sbjct: 629 ALRLYKDMLDREIQPDSCTHSALLKHLNKDYKS 661
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 133/285 (46%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S Y+ LI G+ + + D+A + M+ P +VT+N ++ G C+ + A L
Sbjct: 259 SAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLL 318
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M K P++VS+NTLI G+ E + E+ G S VT L+DGLC
Sbjct: 319 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRM 378
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + A L + + G P F + LV C GN +A E+ DE+ +G P A
Sbjct: 379 GDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAY 438
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T I G +L +A G+ E+ML G PD +T+N ++ L +G +A L
Sbjct: 439 ITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLY 498
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GL PD +TY ++ + ++ + EML +G P + TY
Sbjct: 499 NGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTY 543
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 125/250 (50%), Gaps = 7/250 (2%)
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE----MIELG 290
+ + + L +F +M KG P++ + N ++R R D +++A E M+E G
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLL---RDRDSSIDVAREVYNVMVECG 185
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT ++D C +G+V +A +L++ + G LP D Y LV L G A
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E++ E+ + G S LI G + EAS L E+ML G +P VT+N ++ L
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C GR DA +L + K L PD ++Y+ L+ GYTR E L E+ G +P +
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365
Query: 471 ATYNSYMDGL 480
TYN+ +DGL
Sbjct: 366 VTYNTLIDGL 375
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 1/281 (0%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC-RNKKFDLALGLFREMREKGCNP 258
+ K +K L + +MV + PD+ N ++ R+ D+A ++ M E G P
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
VV++NT++ F + K E + + +M ++GC + VT +LV+GL + G + +A EL+
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ R G+ + Y L+ C +G A + +E+ +G +P+++ T++ GL +
Sbjct: 249 QEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKW 308
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ +A L++ M+ + ++PD V++N L+ +G +A L +GL P +TY
Sbjct: 309 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTY 368
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L+ G R L +EM+ G PD+ T+ + G
Sbjct: 369 NTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRG 409
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V + +L+ GF K A +D M+ ++PD + I G + A G+
Sbjct: 398 PDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 457
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G P+++++N I G E + +M+ G VT ++
Sbjct: 458 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 517
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + KA + ++ +G+ P Y L+ G +A+ E+ +KG P+VI
Sbjct: 518 AGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVIT 577
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI GL ++RK +A +M +GI P+ T+ L+ + C++G +A RL
Sbjct: 578 YNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDML 637
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ + PD T+ L+ ++ + +L N
Sbjct: 638 DREIQPDSCTHSALLKHLNKDYKSHVVRHLEN 669
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRE 448
KM+ +G+LPD N +L L D ++D R + + G+ P +TY+ ++ + ++
Sbjct: 144 KMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQ 203
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +E L+ +M G +P+ TYN ++GLS++
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHS 238
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+ ++++I RP+V IY LI F++ F A+ M + PD+ +N LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + K+ D A EM E G PN ++ I G+ +F EM E G
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V C L++ C +G+V++AC +G+L Y L+ L A E+
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG P V + LI G +L +AS + ++M++EG+ P+ + +N LL C
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L S KGL P+ +TY ++ GY + E L +EM +G +PD Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 474 NSYMDG 479
+ +DG
Sbjct: 736 TTLVDG 741
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 13/318 (4%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA + DG++A LI P Y LI G+ CRE + G Y+ +V + + V
Sbjct: 365 KAKALFDGMIA----SGLI---PQAQAYASLIEGY--CREKNVRQG-YELLVEMKKRNIV 414
Query: 226 V---TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ T+ ++ G C + D A + +EM GC PNVV + TLI+ F +F + + +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM E G L+ GL R+ +A +++ G+ P F Y +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A + V E+ + G LP+ + CT LI + K +EA M+ +GIL D+ T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L+ L + DA+ + KG+ PD +Y +L++G+++ ++ ++ +EM+
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 463 DEGFIPDLATYNSYMDGL 480
+EG P++ YN + G
Sbjct: 655 EEGLTPNVIIYNMLLGGF 672
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 50/364 (13%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALG 211
+ + +N K ++++D F MR G+ P V Y VLINGF K KA
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMR----GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+D MV + + P+V+ +N+L+ GFCR+ + + A L EM KG +PN V++ T+I G+
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL-------------- 317
E + EM G S LVDG C V +A +
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 318 -------VIDFSR--------RGVLPKDFDYFG---------LVEKLCGEGNAGIALEVV 353
V F + ++ FD FG +++ LC EGN A E+
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ +P+VI T+L+ G ++ + E + ++ + GI PD + ++ ++
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHI-----LVSGYTRENRRKEGENLVNEMLDEGFIP 468
G T A L K DG I L+SG+ + + E ++ M+ +IP
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 469 DLAT 472
D AT
Sbjct: 949 DSAT 952
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+VLI+G K + + A M V D T+++LI G + + D A GL EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G N ++ I E ++ + MI G + L++G C E V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ EL+++ +R ++ + Y +V+ +C G+ A +V E+ G P+V+ TTLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ + + +A ++++M ++GI PD +N L+ L R +A + GL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
P+ TY +SGY + + V EM + G +P+
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 141/347 (40%), Gaps = 84/347 (24%)
Query: 156 IFHFAV--NAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+F + V N F K M F+ M + +G P+V IYN+L+ GF + E +KA
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG--- 269
D M + P+ VT+ +I G+C++ A LF EM+ KG P+ + TL+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 270 ---------FFGERK---------FDEGVNMAYEM--IELGCEF---------------S 294
FG K F+ +N ++ EL E +
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 295 SVTCEILVDGLCNEGRVLKACEL------------VIDFS----------RR-------- 324
VT I++D LC EG + A EL VI ++ RR
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 325 -----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-----GNLPSVIACTTLIEG 374
G+ P Y ++ EG AL +VD+++ K G S+ C L+ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDAD 420
++ + A +ME M++ +PDS T L+ + C + V+AD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEAD 971
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 175 LAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
L E + +L+DG +P+ YN++I+ K + A + +M + P V+T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-- 286
L++G+ + + +F E G P+ + ++ +I F E + + + +M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 287 ---IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ GC+ S TC L+ G G + A +++ + R +P L+ + C
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Query: 344 GNAGIALEVV 353
N + + V
Sbjct: 964 SNQRVEADAV 973
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 2/319 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+ + + E+M I P V YN L+ G K + +A + RM+
Sbjct: 157 IRGLCEGGRLEEAVALVESMDAYI--APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQG 214
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD T+N +I G+C+ A L ++ KG P+ V++ +LI G E + +
Sbjct: 215 CIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERAL 274
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ E + V LV GLC +G +L A +++ + G P + Y ++ L
Sbjct: 275 ELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C GN A V+++ KG LP V T+I+G + K A L+E+M GI PD+
Sbjct: 335 CKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDA 394
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+N +L LC G+ + + KG P+ +TY+IL+ + + N+ +E ++
Sbjct: 395 ITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 454
Query: 461 MLDEGFIPDLATYNSYMDG 479
M +G +PD ++N+ + G
Sbjct: 455 MSQDGLVPDTISFNTLIHG 473
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 3/309 (0%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E +R+ D P V+ +N +++ + + ++ ++++ + + T NI I G C
Sbjct: 105 EMLRR--DVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCE 162
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ + A+ L M + P+VV++NTL+RG + K E M+ GC T
Sbjct: 163 GGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
++DG C + +A EL+ D +G +P Y L+ LC EG+ ALE+ +E
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
K P ++ +L++GL R + A +M +M+++G PD T+N ++ LC +G
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
DA + A KG PD T++ ++ GY + + LV M G PD TYNS +
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401
Query: 478 DGLSNARKS 486
+GL A K+
Sbjct: 402 NGLCKAGKA 410
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 141/296 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LING + ++AL ++ +KPD+V +N L+ G CR AL +
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E GC+P++ ++N +I G + + + I G T ++DG C
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ A +LV G+ P Y ++ LC G A E +E+ KG P+ I
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 431
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIE ++ + EASG++ +M ++G++PD+++FN L+ C G A L
Sbjct: 432 YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLD 491
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG T++IL+ Y+ + + E + EM+ +G+ PDL TY +DG A
Sbjct: 492 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKA 547
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 36/328 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN +++ V D+A Y RM+ V PD T + I FC + +AL L
Sbjct: 8 PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGE-------RKFDEGVN------------------- 281
R + E+GC+ +++ T++RG + FDE +
Sbjct: 68 LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127
Query: 282 ---------MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ ++++ G + TC I + GLC GR+ +A LV + P
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVT 186
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ LC + A + + + +G +P T+I+G + EA+ L++ +
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G +PD VT+ L+ LC G A L A K L PD + Y+ LV G R+
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
++NEM+++G PD+ TYN ++GL
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGL 334
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 4/339 (1%)
Query: 145 DGIFSCPEMERIFHFA-VNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVK 202
D IF +R+ + + +N + L F EA K D +P + +YN L+ G +
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAK--DLKPDLVVYNSLVKGLCR 301
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
AL + MV D PD+ T+NI+I+G C+ A + + KG P+V +
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FNT+I G+ K D + + M G ++T +++GLC G+ + E +
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G P Y L+E C A V+ + + G +P I+ TLI G R
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
A L +K+ ++G + TFN L+ A+++ +KG PD TY +LV
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLV 541
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G + + EM+ +GF+P +AT+ ++ L+
Sbjct: 542 DGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 162 NAFVKA-NRMNDGLLAFEAMRKLI-DG-RPSVSIYNVLINGFVKCREF-DKALGFYDRMV 217
N+ VK R L A + M +++ DG P + YN++ING K D A+ D +V
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ + PDV TFN +I G+C+ K D AL L M G P+ +++N+++ G K
Sbjct: 353 KGYL-PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E EMI GC +++T IL++ C ++ +A +++ S+ G++P + L+
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C G+ A + +L +KG + LI A + +M+ +G
Sbjct: 472 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 531
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRL-LAS--TKGLDPDGMTYHILVSGYTRENRRKEG 454
PD T+ L++ C + + DR + LA +KG P T+ +++ +R E
Sbjct: 532 PDLYTYRVLVDGSC---KAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEA 588
Query: 455 ENLVNEMLDEGFIPDL 470
+++ M+ G +P++
Sbjct: 589 VAIIHIMVRMGVVPEV 604
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 142/308 (46%), Gaps = 31/308 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N KA + + FE M ++ G RP+ YN+LI F K + ++A G R
Sbjct: 397 YNSVLNGLCKAGKAKEVNETFEEM--ILKGCRPNAITYNILIENFCKINQLEEASGVIVR 454
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +D + PD ++FN LI GFCRN D A LF+++ EKG + +FN LI + +
Sbjct: 455 MSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 514
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ EMI G + T +LVDG C V +A + + +G +P +
Sbjct: 515 MQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGR 574
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-LMEKMLKE 394
++ L A+ ++ + + G +P V+ L +K + A L+E+++K+
Sbjct: 575 VLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTI-----LSTDKKEIAAPKILVEELMKK 629
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD-------GMTY--------H 439
G + T+ L E + D T A + RL DPD G++Y H
Sbjct: 630 GHISYP-TYEVLHEGVRDNKLTRKARKWRL------SDPDCMNTTTHGISYSLLLLQIDH 682
Query: 440 ILVSGYTR 447
IL+SG +
Sbjct: 683 ILISGLIK 690
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ L E M + P YN ++NG K + + ++ M
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMW-MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM 420
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +P+ +T+NILI FC+ + + A G+ M + G P+ +SFNTLI GF
Sbjct: 421 ILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDL 480
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + ++ E G ++ T IL+ ++ + A ++ + +G P + Y L
Sbjct: 481 DGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVL 540
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ C N A + E+ KG +PS+ ++ L + EA ++ M++ G+
Sbjct: 541 VDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGV 600
Query: 397 LPDSV 401
+P+ V
Sbjct: 601 VPEVV 605
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
GC P ++N ++ D+ + M+ G + T + + C GR A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
L+ RG K Y +V L G+ A + DE+ ++ P V ++
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDP 433
L + +E+ L+ K+LK G+ + T N + LC+ GR +A + L+ S + P
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEA--VALVESMDAYIAP 182
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D +TY+ L+ G ++++ +E + M+++G IPD TYN+ +DG
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDG 228
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC ++ ++D L N +A ++ + GV P + ++ C G +A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L ++ L ++G +A T++ GL G +A L ++ML+ + PD TFN +L
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G +++ L +G+ + T +I + G R +E LV E +D PD
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPD 183
Query: 470 LATYNSYMDGLSNARK 485
+ TYN+ M GL K
Sbjct: 184 VVTYNTLMRGLCKDSK 199
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 202/476 (42%), Gaps = 73/476 (15%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS- 126
Q++P H + + H T F W S ++H+ F+ ++ L F+
Sbjct: 68 QLSPQLKAHHVAEIVAVHKD-TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAP 126
Query: 127 ----------------ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR- 169
E+ V +F++ ++SC + + A V+ R
Sbjct: 127 ADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTL--LIQLAKFEMVEGARN 184
Query: 170 -----MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+N G+ +PS+ +N LIN K + +A ++ + + PD
Sbjct: 185 LYKQMLNSGI------------QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPD 232
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
V T+ LI G CRN+ DLA G+F M ++GC+PN V+++TLI G E + DE ++M
Sbjct: 233 VFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLE 292
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
EMIE G E + T + + LC +A ELV +RG P Y L+ L G
Sbjct: 293 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGL----------------------------R 376
+A+ + ++ K+G +P+ + LI L
Sbjct: 353 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 412
Query: 377 RLRKGV-------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+ KG+ +A L EKMLK G LP VT+N L+ G +A RL L
Sbjct: 413 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G +PD TY+ LVSG+++ + + EM++ G P+ +Y + +DG S K
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 157/324 (48%), Gaps = 11/324 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFY 213
++ +N R + L F M +G S++ YN +I G + +KA+ +
Sbjct: 376 YNALINELCVGGRFSTALKIFHWM----EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M++ P VVT+N LI+G+ + A L M+E GC P+ ++N L+ GF
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K + EM+E G + V+ L+DG +G+V A L+ G P Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ L E A ++ D++ ++G LP+VI TTLI+GL R + A + M K
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
LP+ T++ L+ LC G+ +A+R+ S G +P TY LVSG R+ R E
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAERM----SEIGCEPTLDTYSTLVSGLCRKGRFYE 667
Query: 454 GENLVNEMLDEGFIPDLATYNSYM 477
E LV +M + GF PD Y S +
Sbjct: 668 AEQLVKDMKERGFCPDREIYYSLL 691
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 164/368 (44%), Gaps = 42/368 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N ++ +N+ + M++ +G P YN L++GF K + + A ++
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKE--NGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + P+ V++ LI G ++ K D+AL L + M E GCNPNV S+N +I G E +
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F E + +M+E G + +T L+DGLC GR A ++ D +R LP + Y
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC EG A A + + + G P++ +TL+ GL R + EA L++ M + G
Sbjct: 624 LIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679
Query: 396 ILPDSVTFNCLLED-----------------------------------LCDVGRTVDAD 420
PD + LL LC G+ +A
Sbjct: 680 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 739
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L K + D + + +LV G +E L++ M + F P++ TY L
Sbjct: 740 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 799
Query: 481 SNARKSVR 488
S KS+
Sbjct: 800 SRIGKSIE 807
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 154/314 (49%), Gaps = 5/314 (1%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ ++ FE M K+ P+V YN LING++ + A D M + +PD T+N
Sbjct: 424 IEKAMVLFEKMLKM-GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+SGF + K + A F+EM E G NPN VS+ LI G + K D +++ M E+
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC + + +++GL E R +A ++ +G+LP Y L++ LC G A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ ++ K+ LP++ ++LI GL + K EA E+M + G P T++ L+
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSG 658
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC GR +A++L +G PD Y+ L+ + + + + + +GF
Sbjct: 659 LCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLH 718
Query: 470 LATYNSYMDGLSNA 483
L+ Y + + L A
Sbjct: 719 LSIYRALICALCKA 732
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 170/394 (43%), Gaps = 71/394 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N K ++ + L + + D P V Y LI G + R D A G +DRM
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQY-DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--------------------- 255
V++ P+ VT++ LI+G C + D AL + EM EKG
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319
Query: 256 --------------CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
C PNV ++ LI G K + + + ++M++ G ++VT L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++ LC GR A ++ G L Y +++ LC G+ A+ + +++ K G
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD- 420
LP+V+ TLI G A+ L++ M + G PD T+N L+ G+ A
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499
Query: 421 --------------------------------RLRLLASTK--GLDPDGMTYHILVSGYT 446
L LL + G +P+ +Y+ +++G +
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ENR E E + ++M+++G +P++ TY + +DGL
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +ING K F +A D+MV + P+V+T+ LI G CRN + A +
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M ++ C PN+ ++++LI G E K DE A M E+GCE + T LV GLC
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADE----AERMSEIGCEPTLDTYSTLVSGLCR 661
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+GR +A +LV D RG P Y+ L+ C AL++ + KG +
Sbjct: 662 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI 721
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI L + + EA L + ML++ D + + L++ L G +L +
Sbjct: 722 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 781
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+K P+ TY IL +R + E E L +++
Sbjct: 782 SKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 202/436 (46%), Gaps = 18/436 (4%)
Query: 58 KTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVR 117
KT +L ++ P L S H Q TH I + + L V
Sbjct: 7 KTLILLANLIKVPPLKAFSLLNSPNFHGFQHTHESISILLRLLLSGNLYSHAQSLLLQVI 66
Query: 118 SLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAF 177
S +F S+L++++ + + R++ +NA+V++ ++ + F
Sbjct: 67 SGKIQSQFFTSSSLLHYLTESE---------TSKTKSRLYEVIINAYVQSQSLDSSIYYF 117
Query: 178 EAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
M +D P + +N L+ V F++ F++ + +V DV +F I+I G
Sbjct: 118 NEM---VDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIVIKGC 173
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C + + + L E+RE G +PNVV + TLI G + + ++ ++ +EM + G +
Sbjct: 174 CEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANE 233
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
T +L+ GL G + E+ GV P Y ++ +LC +G A +V DE
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDE 293
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ ++G +++ TLI GL R K EA+ +M++M +GI P+ +T+N L++ C V +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L ++GL P +TY+ILVSG+ ++ +V EM + G P TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413
Query: 476 YMDGLS---NARKSVR 488
+D + N K+++
Sbjct: 414 LIDTFARSDNMEKAIQ 429
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 147/294 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLI+G K + Y++M V P++ T+N +++ C++ + A +F EMR
Sbjct: 236 YTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMR 295
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G + N+V++NTLI G E K +E + +M G + +T L+DG C ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLG 355
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L D RG+ P Y LV C +G+ A +VV E+ ++G PS + T LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ R +A L M + G+ PD T++ L+ C GR +A RL K +
Sbjct: 416 DTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFE 475
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
P+ + Y+ +V GY +E L EM ++ P++A+Y ++ L RKS
Sbjct: 476 PNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 1/329 (0%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G F E + ++ K G +E M++ P++ YN ++N K
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH-GVFPNLHTYNCVMNQLCKDGR 283
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A +D M V ++VT+N LI G CR K + A + +M+ G NPN++++NT
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI GF G RK + +++ ++ G S VT ILV G C +G A ++V + RG
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y L++ N A+++ + + G P V + LI G + EAS
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L + M+++ P+ V +N ++ C G + A RL K L P+ +Y ++
Sbjct: 464 RLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVL 523
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYN 474
+E + KE E LV +M+D G P + N
Sbjct: 524 CKERKSKEAEGLVEKMIDSGIGPSDSILN 552
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IY LI+G K E +KA + M + + + T+ +LI G +N +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M+E G PN+ ++N ++ + + + + EM E G + VT L+ GLC
Sbjct: 256 YEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + +A E++ G+ P Y L++ CG G AL + +L +G PS++
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ G + A ++++M + GI P VT+ L++ A +LR
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
GL PD TY +L+ G+ + R E L M+++ F P+ YN+ + G S
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSY 495
Query: 488 RQTR 491
R R
Sbjct: 496 RALR 499
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 122/243 (50%), Gaps = 6/243 (2%)
Query: 165 VKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
+KAN N+ + M+ DG P++ YN LI+GF R+ KAL + + P
Sbjct: 317 MKANEANE---VMDQMKS--DGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+VT+NIL+SGFC+ A + +EM E+G P+ V++ LI F ++ + +
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M ELG T +L+ G C +GR+ +A L + P + Y +V C E
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G++ AL + E+ +K P+V + +IE L + RK EA GL+EKM+ GI P
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSIL 551
Query: 404 NCL 406
N +
Sbjct: 552 NLI 554
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 194/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS------CPEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV+ A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 15/333 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFY 213
++ VN + +A + +A R++ID P YN LI AL +
Sbjct: 131 YNTMVNGYCRAGNI-------DAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVF 183
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ P VVT++IL+ C+ + A+ L EMR KGC P++V++N LI +
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
E + + + GC+ +VT ++ LC+ R +A +L+ P + +
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ LC +G G A +V+ ++ + G P +I +++++GL + R+ EA L++++L
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363
Query: 394 EGI----LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY-TRE 448
E + +PD VTFN ++ LC G A ++ S G PD TY+ +V G+ +
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS 423
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ +E +L+N M+ G PD TY S GLS
Sbjct: 424 CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLS 456
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 6/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++A K + ++ + MR P + YNVLIN + +AL + +
Sbjct: 198 YSILLDATCKESGYKQAVVLLDEMRSK-GCEPDIVTYNVLINAMCSQGDVGEALKVLNSL 256
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPD VT+ ++ C +++++ A L +M C P+ V+FN +I +
Sbjct: 257 PSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFV 316
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC----ELVIDFSRRGVLPKDFD 332
+ +M E GC +T ++DGLC E RV +A EL+ + + +P
Sbjct: 317 GRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVT 376
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG-LRRLRKGVEASGLMEKM 391
+ ++ LC +G A++VVDE+ + G +P + +++G L + K EA L+ M
Sbjct: 377 FNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLM 436
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G+ PD+ T+ L L A + GL PD M Y+ ++ G ++ R
Sbjct: 437 VSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRT 496
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ M+ G +PD +TY ++G++
Sbjct: 497 DLAIDFFAYMVSNGCMPDESTYIILVEGIA 526
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
++T+N +++G+CR D A R + P+ ++N LIR + + +
Sbjct: 128 IITYNTMVNGYCRAGNIDAAR---RMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+ GC S VT IL+D C E +A L+ + +G P Y L+ +C +G
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQG 244
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ G AL+V++ L G P + T +++ L + EA L+ KM PD VTFN
Sbjct: 245 DVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFN 304
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG----ENLVNE 460
++ LC G A ++ S G PD +TY ++ G +E R E + L+ E
Sbjct: 305 AVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAE 364
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ + IPD T+N+ + L
Sbjct: 365 MVSKNCIPDQVTFNTIITSL 384
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 137/310 (44%), Gaps = 6/310 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NA + + L ++ +P Y ++ +++A +M
Sbjct: 233 YNVLINAMCSQGDVGEALKVLNSLPSY-GCKPDAVTYTPVLKSLCSSERWEEADKLLTKM 291
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD VTFN +I+ C+ A + +M E GC P+++++++++ G ER+
Sbjct: 292 FSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRV 351
Query: 277 DEGVNMA----YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DE + + EM+ C VT ++ LC +G +A ++V + S G +P
Sbjct: 352 DEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITT 411
Query: 333 YFGLVEK-LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +V+ LC AL++++ + G P +L GL R + A G+ ++
Sbjct: 412 YNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRV 471
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
G+ PD + +N +L LC RT A + G PD TY ILV G E
Sbjct: 472 QAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFL 531
Query: 452 KEGENLVNEM 461
+E + L+ +
Sbjct: 532 EEAKELLGNL 541
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 10/294 (3%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N + G V+ E D AL + P V+ NILI C + + A R +
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADA---ERVVEA 121
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS--SVTCEILVDGLCNEGRV 311
G + ++++NT++ G+ D A MI+ F+ + T L+ LC G V
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDA----ARRMID-SVPFAPDTFTYNPLIRALCVRGCV 176
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
L A + D RG P Y L++ C E A+ ++DE+ KG P ++ L
Sbjct: 177 LDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVL 236
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I + EA ++ + G PD+VT+ +L+ LC R +AD+L +
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDC 296
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +T++ +++ ++ ++ +M + G PD+ TY+S MDGL R+
Sbjct: 297 APDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERR 350
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 127/329 (38%), Gaps = 74/329 (22%)
Query: 74 LLHFLKSKLHHHPQFTHYDFHIFAWASTID--------------SFRHDHTTFLFIVRSL 119
LL ++SK P Y+ I A S D + D T+ +++SL
Sbjct: 217 LLDEMRSK-GCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSL 275
Query: 120 ASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
SS R+ E +L + +N C P+ E F+ + + + +
Sbjct: 276 CSSERWEEADKLLTKMFSNDCA---------PD-EVTFNAVITSLCQKGFVGRATKVLAQ 325
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGF 235
M + P + Y+ +++G K R D+A+ ++ + V PD VTFN +I+
Sbjct: 326 MSEH-GCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSL 384
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF------------------------- 270
C+ FD A+ + EM E GC P++ ++N ++ GF
Sbjct: 385 CQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPD 444
Query: 271 --------FGERKFDE---GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
FG + DE + M + +G + ++ GLC + R +L I
Sbjct: 445 TTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRT----DLAI 500
Query: 320 DF----SRRGVLPKDFDYFGLVEKLCGEG 344
DF G +P + Y LVE + EG
Sbjct: 501 DFFAYMVSNGCMPDESTYIILVEGIAYEG 529
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 188 PSVSIYNVLINGFV-KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P ++ YN +++GF+ K + ++AL + MV + + PD T+ L G R + + A+G
Sbjct: 407 PDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIG 466
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+FR ++ G +P+ + +N ++ G + + D ++ M+ GC T ILV+G+
Sbjct: 467 MFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIA 526
Query: 307 NEGRVLKACELVIDFS 322
EG + +A EL+ + S
Sbjct: 527 YEGFLEEAKELLGNLS 542
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+ ++++I RP+V IY LI F++ F A+ M + PD+ +N LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + K+ D A EM E G PN ++ I G+ +F EM E G
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V C L++ C +G+V++AC +G+L Y L+ L A E+
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG P V + LI G +L +AS + ++M++EG+ P+ + +N LL C
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L S KGL P+ +TY ++ GY + E L +EM +G +PD Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 474 NSYMDG 479
+ +DG
Sbjct: 736 TTLVDG 741
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 13/318 (4%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA + DG++A LI P Y LI G+ CRE + G Y+ +V + + V
Sbjct: 365 KAKALFDGMIA----SGLI---PQAQAYASLIEGY--CREKNVRQG-YELLVEMKKRNIV 414
Query: 226 V---TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ T+ ++ G C + D A + +EM GC PNVV + TLI+ F +F + + +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM E G L+ GL R+ +A +++ G+ P F Y +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A + V E+ + G LP+ + CT LI + K +EA M+ +GIL D+ T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L+ L + DA+ + KG+ PD +Y +L++G+++ ++ ++ +EM+
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 463 DEGFIPDLATYNSYMDGL 480
+EG P++ YN + G
Sbjct: 655 EEGLTPNVIIYNMLLGGF 672
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 50/364 (13%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALG 211
+ + +N K ++++D F MR G+ P V Y VLINGF K KA
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMR----GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+D MV + + P+V+ +N+L+ GFCR+ + + A L EM KG +PN V++ T+I G+
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL-------------- 317
E + EM G S LVDG C V +A +
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 318 -------VIDFSR--------RGVLPKDFDYFG---------LVEKLCGEGNAGIALEVV 353
V F + ++ FD FG +++ LC EGN A E+
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ +P+VI T+L+ G ++ + E + ++ + GI PD + ++ ++
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHI-----LVSGYTRENRRKEGENLVNEMLDEGFIP 468
G T A L K DG I L+SG+ + + E ++ M+ +IP
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 469 DLAT 472
D AT
Sbjct: 949 DSAT 952
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+VLI+G K + + A M V D T+++LI G + + D A GL EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G N ++ I E ++ + MI G + L++G C E V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ EL+++ +R ++ + Y +V+ +C G+ A +V E+ G P+V+ TTLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ + + +A ++++M ++GI PD +N L+ L R +A + GL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
P+ TY +SGY + + V EM + G +P+
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 141/347 (40%), Gaps = 84/347 (24%)
Query: 156 IFHFAV--NAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+F + V N F K M F+ M + +G P+V IYN+L+ GF + E +KA
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG--- 269
D M + P+ VT+ +I G+C++ A LF EM+ KG P+ + TL+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 270 ---------FFGERK---------FDEGVNMAYEM--IELGCEF---------------S 294
FG K F+ +N ++ EL E +
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 295 SVTCEILVDGLCNEGRVLKACEL------------VIDFS----------RR-------- 324
VT I++D LC EG + A EL VI ++ RR
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 325 -----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-----GNLPSVIACTTLIEG 374
G+ P Y ++ EG AL +VD+++ K G S+ C L+ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDAD 420
++ + A +ME M++ +PDS T L+ + C + V+AD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEAD 971
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 175 LAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
L E + +L+DG +P+ YN++I+ K + A + +M + P V+T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-- 286
L++G+ + + +F E G P+ + ++ +I F E + + + +M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 287 ---IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ GC+ S TC L+ G G + A +++ + R +P L+ + C
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Query: 344 GNAGIALEVV 353
N + + V
Sbjct: 964 SNQRVEADAV 973
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 167/332 (50%), Gaps = 6/332 (1%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFV 201
NDG P++ +++ ++ K +ND AF+ + + R P V YN LI+GF
Sbjct: 324 NDGKLVQPDV-VMYNTIIDGMCKDKHVND---AFDLYSEKVSKRIFPDVFTYNALISGFC 379
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ A+ +++M + PDV TF+IL+ GFC++ A + M ++ P+VV
Sbjct: 380 IVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVV 439
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++++L+ G+ + ++ ++ M G + + I+++G C V +A +L +
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+ + P Y L++ LC G ALE+VDE+ +G P +I ++++ L +
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A L+ K+ +GI PD T+ L++ LC G+ DA ++ KG + D Y ++
Sbjct: 560 DKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVM 619
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ G+ + E L+++M + G IPD TY
Sbjct: 620 IQGFCDKGLFDEALALLSKMEENGCIPDAKTY 651
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 5/313 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ F ++ D + F M + +I P V +++L++GF K +A M++
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNII---PDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPDVVT++ L+ G+C + + A +F M +G NV S+N +I GF + DE
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM +T L+DGLC GR+ A ELV + RG P Y +++
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC + + A+ ++ +L +G P + T L++GL + K +A + E +L +G
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D + +++ CD G +A L G PD TY I++ ++ E L+
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLL 671
Query: 459 NEMLDEGFIPDLA 471
EM+ G + L
Sbjct: 672 REMIMRGLLVALT 684
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K E AL R V+PDVV +N +I G C++K + A L+ E
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
K P+V ++N LI GF K + +++ +M T ILVDG C +G +
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ ++ + P Y L++ C A + + + +G +V + +I
Sbjct: 421 EAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMI 480
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++ EA L ++M + I PD +T++ L++ LC GR A L +G
Sbjct: 481 NGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ 540
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY+ ++ +++ + L+ ++ +G PD+ TY + GL + K
Sbjct: 541 PDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P I GF + +AL F+D+++ D V++ LI+G C+ + AL
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALE 319
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L R K P+VV +NT+I G ++ ++ ++ E + T L+ G C
Sbjct: 320 LLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFC 379
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ A +L + + ++P + + LV+ C +GN A V+ + K+ P V+
Sbjct: 380 IVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVV 439
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++L++G + + +A + M G+ + ++N ++ C + +A +L
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + PD +TY L+ G + R LV+EM G PD+ TYNS +D L
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 12/275 (4%)
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FG 272
+++++ +PD +T I GFC + AL ++ G + + VS+ TLI G G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 273 ERKFDEGVNMAYEMIELG----CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
E K A E++ + V ++DG+C + V A +L + + + P
Sbjct: 313 ETK------AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFP 366
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
F Y L+ C G A+++ +++ K +P V + L++G + EA ++
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
M+K+ I PD VT++ L++ C V A+ + S +G+ + +Y+I+++G+ +
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 486
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E L EM + PD+ TY+S +DGL +
Sbjct: 487 KMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
++ + G P+ ++ T I+GF + + + ++ ++I +G V+ L++GLC G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
A EL+ + V P Y +++ +C + + A ++ E K P V
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI G + K +A L KM + I+PD TF+ L++ C G +A + + +
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ PD +TY L+ GY N + E++ N M G ++ +YN ++G +
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 37/366 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++++ + M L P++ Y+ LING+V + + A G M
Sbjct: 199 VNAFCKDGKVDEAAGFVKKMENL-GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC-NPNVVSFNTLIRGFFGERKFDEG 279
V +VVT+ +LI G+C+ K D A + R M+E+ P+ ++ LI G+ K D+
Sbjct: 258 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 317
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + EM+ LG + + C L++G C G + +A ++ + P + Y L++
Sbjct: 318 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 377
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ A + D++ ++G P+V+ TL++GL R+ +A + M+K G+ PD
Sbjct: 378 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD 437
Query: 400 SV-----------------------------------TFNCLLEDLCDVGRTVDADRLRL 424
V TFN ++ LC +G+ V+A+ +
Sbjct: 438 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 497
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PDG+TY L+ GY + + + + M E P + YNS + GL +R
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557
Query: 485 KSVRQT 490
+ V T
Sbjct: 558 RLVEVT 563
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 161/371 (43%), Gaps = 67/371 (18%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN L+ G + FD AL + M++ V PD V ++ L+ G + + F+ A L
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++++ +G + ++FNT+I G K E + +M +LGC +T L+DG C
Sbjct: 461 WKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCK 520
Query: 308 EG-----------------------------------RVLKACELVIDFSRRGVLPKDFD 332
R+++ +L+ + RG+ P
Sbjct: 521 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 580
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ C EG A E+ + G ++I C+T++ GL RL + EA+ LM+KM+
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640
Query: 393 KEG--------------------------------ILPDSVTFNCLLEDLCDVGRTVDAD 420
G +LP+++ +N + LC G+ DA
Sbjct: 641 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R + S KG PD TY L+ GY+ E L +EML G +P++ TYN+ ++GL
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760
Query: 481 SNARKSVRQTR 491
+ R R
Sbjct: 761 CKSENVDRAQR 771
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 15/397 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM-- 153
F + S +FR + ++ +V L+ + E + LN + + C + G E+
Sbjct: 55 FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-VDLCKFKDRGNVIWDELVG 113
Query: 154 --------ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCR 204
+F + +V+ + L F+ M K GR PS+ N L+N VK
Sbjct: 114 VYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC--GRIPSLRSCNSLLNNLVKNG 171
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
E A Y +M+R + PDV +I+++ FC++ K D A G ++M G PN+V+++
Sbjct: 172 ETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYH 231
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + + M E G + VT +L+ G C + ++ +A +++
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291
Query: 325 GVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
L D +G L++ C G A+ ++DE+ + G ++ C +LI G + + E
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A G++ +M+ + PDS ++N LL+ C G T +A L +G++P +TY+ L+
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G R + + + M+ G PD Y++ +DGL
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + K +++ A + +++D +P YN L++G+ + +A D+M++
Sbjct: 340 INGYCKRGEIHE---AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ ++P V+T+N L+ G CR FD AL ++ M ++G P+ V ++TL+ G F F+
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ +++ G S +T ++ GLC G++++A E+ G P Y L++
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 516
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C N G A +V + ++ PS+ +LI GL + R+ VE + L+ +M G+ P
Sbjct: 517 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 576
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ L++ C G A + GL + + +VSG R R E L+
Sbjct: 577 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 636
Query: 459 NEMLDEGFIPD 469
+M+D GF PD
Sbjct: 637 QKMVDHGFFPD 647
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 154/327 (47%), Gaps = 8/327 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + + K +M++ M++ P Y VLI+G+ + + D A+ D M
Sbjct: 265 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 324
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R +K ++ N LI+G+C+ + A G+ M + P+ S+NTL+ G+ E
Sbjct: 325 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 384
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E N+ +M++ G E + +T L+ GLC G A ++ +RGV P + Y L
Sbjct: 385 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTL 444
Query: 337 VEKLCGEGNAGIALEVVDELWK----KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
++ L N E LWK +G S I T+I GL ++ K VEA + +KM
Sbjct: 445 LDGLFKMEN----FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G PD +T+ L++ C A +++ + + P Y+ L+SG + R
Sbjct: 501 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 560
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
E +L+ EM G P++ TY + +DG
Sbjct: 561 EVTDLLTEMGIRGLTPNIVTYGALIDG 587
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 145/346 (41%), Gaps = 33/346 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K +M + F+ M+ L P Y LI+G+ K +A M
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDL-GCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ + P + +N LISG ++++ L EM +G PN+V++ LI G+ E
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA-----------------CELVI 319
D+ + +EM E G + + C +V GL GR+ +A C L
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 654
Query: 320 DFSRRGV---------------LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
D + LP + Y + LC G A L KG +P
Sbjct: 655 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TLI G EA L ++ML+ G++P+ VT+N L+ LC A RL
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
KGL P+ +TY+ L+ GY + L ++M++EG P +
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ A+ K +++D F +M L P Y LI+G+ D+A D
Sbjct: 682 VYNIAIAGLCKTGKVDDARRFF-SMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 740
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R + P++VT+N LI+G C+++ D A LF ++ +KG PNVV++NTLI G+
Sbjct: 741 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 800
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEIL 301
D + +MIE G S+ C +L
Sbjct: 801 MDAAFKLKDKMIEEGIS-PSIQCNLL 825
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 194/463 (41%), Gaps = 63/463 (13%)
Query: 52 HLLRFLKTH-----LLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDF--HIFAWASTIDS 104
HLL L T LL ++ I+ + ++K+ L P +Y F HI AW+
Sbjct: 84 HLLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEF-- 141
Query: 105 FRHDHTTFLFIVRSLASSYRFSE-LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
+ FL + L F+E + L F + C+ D + IF V A
Sbjct: 142 --KEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQD---CNWDPV--------IFDMLVKA 188
Query: 164 FVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
+V+ + +G F RK+++ PSV N L+NG +K D+ Y M R +
Sbjct: 189 YVREGMIKEGFTTF---RKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGI 245
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
P+ TFNIL FC++ D M E+G P++V++NTLI + + + D+
Sbjct: 246 HPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFY 305
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ M V+ L++GLC EG+V +A +L RG+ P + L+ C
Sbjct: 306 LYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYC 365
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE------------------ 383
EG + ++ E+ G P + C LIEG R+ + V
Sbjct: 366 KEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTD 425
Query: 384 -----------------ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A L++++ + G +P +N L+E LC DA ++
Sbjct: 426 IYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEM 485
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+ + P +TY L+ R +R E E+L+ EML G +PD
Sbjct: 486 GHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPD 528
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 153/320 (47%), Gaps = 27/320 (8%)
Query: 173 GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD---RMVRD-RVKPDVVTF 228
L F ++ + +PS+ Y L++ +EF +A+ F ++V+D DV F
Sbjct: 108 ALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDV--F 165
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
L+ FC + CN + V F+ L++ + E EG +++E
Sbjct: 166 QTLL--FCC----------------QDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVE 207
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+GC S ++C L++GL R+ + ++ + +R G+ P + + L C +G+
Sbjct: 208 VGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDK 267
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
+ ++ + ++G P ++ TLI R + +A L M + +LPD V++ L+
Sbjct: 268 VNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMN 327
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G+ +A +L +GL+PD ++++ L+ GY +E + +E +L++EM+ G P
Sbjct: 328 GLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICP 387
Query: 469 DLATYNSYMDGLSNARKSVR 488
D T ++G RK R
Sbjct: 388 DKVTCQVLIEGY---RKEAR 404
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 104/272 (38%), Gaps = 36/272 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LI G+ K + ++ M+ + PD VT +LI G+ + + AL L
Sbjct: 352 PDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNL 411
Query: 248 FREMR-----------------------------------EKGCNPNVVSFNTLIRGFFG 272
E+ ++G P V +N LI
Sbjct: 412 VVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCK 471
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + + EM + S++T + L+ LC R ++A L+ + + G+LP
Sbjct: 472 SDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDI 531
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L+ C E + G A ++ K+ + + TL++ L ++ML
Sbjct: 532 CRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRML 591
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
K G P+ TF ++ L V+ D+L L
Sbjct: 592 KVGFAPNIQTFRQMIHGLWK-AMAVEKDKLLL 622
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 164/355 (46%), Gaps = 26/355 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFD 207
CP E + ++ KA R+++ FE ++ DG ++ + Y+ LI+G + FD
Sbjct: 280 CPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ---DGGFTLGLIGYSCLIDGLFQAGRFD 336
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ L +Y M+ + PD+ + ILI F + A L EM++KG P+ +NTL+
Sbjct: 337 EGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLL 396
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ F D ++ EM++ S T I++ GLC +G + KA ++ + G
Sbjct: 397 KALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCH 456
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKK---GNLPSVIACTTL-------IEGLRR 377
P Y L++ L G LE L+ K GN PS+ TL E LR+
Sbjct: 457 PTVMTYNALIDGLYRAG----MLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRK 512
Query: 378 LRKGVEASG-------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L G+ SG L+ +++ G++PD VT+N L+ LC A RL KG
Sbjct: 513 LVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKG 572
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ PD +TY L+ G R +R + L +L G P L YN+ M L +K
Sbjct: 573 ISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKK 627
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 129/283 (45%), Gaps = 16/283 (5%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + F +A R D L + M+ P YN L+ D+A
Sbjct: 356 LYTILIRRFAEAGRTKDAFLLLDEMKD-KGFVPDTFCYNTLLKALFDVGNIDRAQSLMSE 414
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+++ V D T NI+I G C+ D A+ +F EM E GC+P V+++N LI G +
Sbjct: 415 MLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGM 474
Query: 276 FDEGVNMAYEMIELGCEFS--------------SVTCEILVDGLCNEGRVLKACELVIDF 321
+E M + +E+G S + + LVDG+C G+VLKA +L+
Sbjct: 475 LEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGI 533
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
GV+P Y L+ LC N AL + EL KG P I TLI+GL R +
Sbjct: 534 IESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRE 593
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+A+ L + +L+ G P +N ++ LC + + A L L
Sbjct: 594 NDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWL 636
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 152/392 (38%), Gaps = 53/392 (13%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGF 200
S G F C +++ V + LLA +++ P+ + Y VL++G
Sbjct: 168 SRMGDFDCRPTAFVYNAVFQVLVDRGVI---LLALALYNRMVSSGCLPNSTTYIVLMDGL 224
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K AL +D M+ + PDV + +L+S C + + A L M+E GC P+
Sbjct: 225 CKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDE 284
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++ + G + DE + + + G + L+DGL GR + +
Sbjct: 285 VTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTE 344
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+ + P Y L+ + G A ++DE+ KG +P TL++ L +
Sbjct: 345 MLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGN 404
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
A LM +ML+ ++ DS T N ++ LC G A ++ G P MTY+
Sbjct: 405 IDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464
Query: 441 LVSGYTRENRRKEGENLVNEM--------------------------------------- 461
L+ G R +E L ++M
Sbjct: 465 LIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVL 524
Query: 462 ---------LDEGFIPDLATYNSYMDGLSNAR 484
++ G +PD+ TYN+ ++GL A+
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAK 556
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 117/302 (38%), Gaps = 13/302 (4%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
A R L+ S + + F + +FD +P +N +
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGDFD-------------CRPTAFVYNAVFQVLVDR 192
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
LAL L+ M GC PN ++ L+ G + + M EM+E G
Sbjct: 193 GVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIY 252
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+L+ LCNEGR+ A L+ G P + Y + LC G A + L
Sbjct: 253 TVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQD 312
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G +I + LI+GL + + E +ML + I PD + L+ + GRT D
Sbjct: 313 GGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKD 372
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L KG PD Y+ L+ ++L++EML + D T+N +
Sbjct: 373 AFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMIC 432
Query: 479 GL 480
GL
Sbjct: 433 GL 434
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 316 ELVIDFSRRGVL---PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
E V FSR G P F Y + + L G +AL + + + G LP+ L+
Sbjct: 162 EAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLM 221
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + V+A + ++ML+ GI+PD + LL LC+ GR DA RL G
Sbjct: 222 DGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCP 281
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD +TY + +SG + R E + + D GF L Y+ +DGL A
Sbjct: 282 PDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQA 332
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
AN++ D E++RKL+DG + + KA ++ V PDVV
Sbjct: 501 ANQVRDT----ESLRKLVDG-------------MCQSGQVLKAYKLLRGIIESGVVPDVV 543
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+N LI+G C+ K D AL LF+E++ KG +P+ +++ TLI G + + ++ + +
Sbjct: 544 TYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNI 603
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ G S ++ LC ++ +A L +D+ LPK ++
Sbjct: 604 LRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDY-----LPKKYN 644
>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 155/309 (50%), Gaps = 10/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YNVL+ C + + R+ R+ KPD ++N LI G CR + A L
Sbjct: 183 PTTATYNVLLKAH--CSDAAAHIDDAVRLFRNIPKPDACSYNTLIDGLCRRSRRVEAQEL 240
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E G P VV++ T+I E D+ + M EM G + VT L+DGLC
Sbjct: 241 FSEMVENGIAPTVVTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCK 300
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A +L+ ++ LP Y ++ LC EG A+EV+D + +G P
Sbjct: 301 GGRAASALDLLERLAKEVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGRKPDAGL 360
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN-------CLLEDLCDVGRTVDAD 420
LI GL + VEA+ +++M+ G+ P+ VT++ ++ LC G A
Sbjct: 361 FGKLIVGLCDAGRAVEAANYLDEMVLAGVQPNRVTWSLHVRINVAVVTALCVKGEVGRAF 420
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ T+G+ + T+H+LV ++++N ++ ++V +ML E IP+ T++ + G
Sbjct: 421 QVYQSMRTRGISTEPSTFHLLVEFFSKKNHLEKAAHVVLDMLSERCIPERETWDVIVSGY 480
Query: 481 SNARKSVRQ 489
+ +K VRQ
Sbjct: 481 WS-KKKVRQ 488
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 146/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY LI+GF K A + M + PD + F+ LI G + K A L
Sbjct: 213 PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL 272
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +KG P+ V++ LI G+ + + + +M+++G + VT L DGLC
Sbjct: 273 FNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCK 332
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A EL+ + R+G+ Y +V LC GN A+++++E+ + G P I
Sbjct: 333 SGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + + V+A L+ +ML G+ P VTFN L+ LC G+ D +RL
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ TY+ ++ Y N + + M +G +PD TYN + G AR
Sbjct: 453 EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y+ +I K + + M++ V PD V + LI GFC+ A
Sbjct: 177 KPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYK 236
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM + P+ ++F+ LI G G K E + EMI+ G E VT L+DG C
Sbjct: 237 LFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYC 296
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + KA L + G+ P Y L + LC G A E++ E+ +KG ++
Sbjct: 297 KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIS 356
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T++ GL + ++A LME+M + G+ PD++T+ L++ G V A L
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREM 416
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+GL P +T+++L++G + ++GE L+ ML++G +P+ ATYNS M
Sbjct: 417 LDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+L+N + + +A RM PDVV++ +I G+C + + L +EM+
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG PN+ +++++I K EG + EM++ G V L+DG C G
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L + R ++P + L+ L G G A ++ +E+ KKG P + T LI
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G +L + +A L +M++ G+ P+ VT+ L + LC G A+ L KGL
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ TY+ +V+G + + L+ EM + G PD TY + MD + V+
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK 408
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 144/295 (48%), Gaps = 5/295 (1%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL---ALGLF 248
+++V V+ ++A F+D+++ V + N+ ++ C + K D+ L +F
Sbjct: 41 VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT--CLSSKRDMLGMVLKVF 98
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
E + G N S+N L+ F K E ++ M GC V+ ++DG C+
Sbjct: 99 SEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHV 158
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + K +LV + +G+ P + Y ++ LC G +V+ E+ K+G P +
Sbjct: 159 GELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIY 218
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TTLI+G +L A L +M I+PDS+ F+ L+ L G+ V+AD+L
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG +PD +TY L+ GY + K+ L N+M+ G P++ TY + DGL +
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 142/298 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +I+G+ E K + M +KP++ T++ +I C++ K +
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
REM ++G P+ V + TLI GF + EM S+ L+ GL
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V++A +L + ++G P + Y L++ C G A + +++ + G P+V+
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L +GL + + A+ L+ +M ++G+ + T+N ++ LC G + A +L
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL PD +TY L+ Y + + L+ EMLD G P + T+N M+GL + K
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGK 440
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 129/257 (50%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
++NIL++ R K A L M KGC P+VVS+ T+I G+ + + V + EM
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + + T ++ LC G+V++ +++ + +RGV P Y L++ C GN
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ E+ + +P IA + LI GL K VEA L +M+K+G PD VT+ L
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ C +G A L GL P+ +TY L G + L++EM +G
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351
Query: 467 IPDLATYNSYMDGLSNA 483
+++TYN+ ++GL A
Sbjct: 352 QLNISTYNTIVNGLCKA 368
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P Y LI+G+ K E KA +++MV+ + P+VVT+ L G C++ + D A
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANE 341
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM KG N+ ++NT++ G + V + EM E G ++T L+D
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYY 401
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G ++KA EL+ + RG+ P + L+ LC G ++ + +KG +P+
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++++ ++ + M +G++PDS T+N L++ C +A L
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
K + +Y+ L+ G+ + + E L EM EG + YN ++D
Sbjct: 522 VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 52/276 (18%)
Query: 247 LFREMREKGCNPNV--VSFNTLIR-GFFGE-RKFDEGVNMAYEMIELGCEFSSVTCEILV 302
L ++ G +P+V V F L+ G E RKF + +++ G S+ +C + +
Sbjct: 28 LIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFD------KLLNYGVALSAGSCNLYL 81
Query: 303 DGLCNE----GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L ++ G VLK + +F + GV Y L+ L G A ++ +
Sbjct: 82 TCLSSKRDMLGMVLK---VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEF 138
Query: 359 KGNLPSVIACTTLIEG------------------LRRLR-----------------KGVE 383
KG +P V++ TT+I+G L+ L+ K VE
Sbjct: 139 KGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVE 198
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
++ +M+K G+ PD V + L++ C +G T A +L + + PD + + L+
Sbjct: 199 GEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALIC 258
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G + + E + L NEM+ +GF PD TY + +DG
Sbjct: 259 GLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++A+ K M + A E +R+++D +P+V +NVL+NG + + M+
Sbjct: 397 MDAYYKTGEM---VKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+ T+N ++ +C ++ ++R M +G P+ ++N LI+G R E
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+E ++ + L+ G ++L+A +L + R G++ Y V+
Sbjct: 514 AWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
Query: 339 KLCGEGNAGIALEVVDELWKK 359
EGN LE+ DE +K
Sbjct: 574 MNYEEGNMETTLELCDEAIEK 594
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 157 FHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N + ++ DG LL + + ++ P+ + YN ++ + + Y
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIM---PNAATYNSIMKQYCIRNNMRISTEIYR 484
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M V PD T+NILI G C+ + A L +EM EK N S+N LI+GFF +
Sbjct: 485 GMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRK 544
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
K E + EM G S+ + VD EG + EL + + +L K
Sbjct: 545 KLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLDK 599
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 155/335 (46%), Gaps = 38/335 (11%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + F+A+ K RPSV YN L+NG+++
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKW-GLRPSVVSYNTLMNGYIRLG 191
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ M+ V+PDV T+++LI+G C+ K D A LF EM KG PN V F
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFT 251
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI DG C GRV A E+ +
Sbjct: 252 TLI-----------------------------------DGHCKNGRVDLAMEIYKQMLSQ 276
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
+ P Y L+ LC +G+ A ++DE+ KG P I TTLI+G + A
Sbjct: 277 SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXA 336
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++M++E D V + L+ LC GR+VDA+++ + GL PD TY ++++
Sbjct: 337 FEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 396
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++ +G L+ EM +G +P + TYN M+G
Sbjct: 397 FCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 166/405 (40%), Gaps = 46/405 (11%)
Query: 93 FHIFAWAS--TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FSFFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+ J+ F+ + A++++ + D + + + P + VL +K
Sbjct: 61 IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVL-EHLMK 119
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ F GFY+ ++ + FNIL+ FC++ JA +F + + G P+VVS
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ G+ DEG + M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLA---------------------------------- 205
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
GV P + Y L+ C E A E+ DE+ KG +P+ + TTLI+G + +
Sbjct: 206 -SGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 264
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
A + ++ML + + PD +T+N L+ LC G A L S KGL PD +TY L+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
G +E M+ E D Y + + GL +SV
Sbjct: 325 DGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSV 369
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 1/328 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + R+++ FE + K P+V Y +I+G +K + L ++ M
Sbjct: 115 IKGLADSKRIDEACELFEEL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P T+ ++I G C+ + A +F +M +KGC P+ +++ TLI GF K DE
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M+ G E ++VT +V G C + +A E++ RG P F + L+
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+G A A +V+ E+ +G P VI T+LI+ L + EA + + M+++G PD+
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+ ++++ +G A + L + G+ PD Y+ L+ GY + R + + +
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVR 488
M+ G P+ T+N M GL K+ R
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDR 441
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 168/369 (45%), Gaps = 17/369 (4%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG- 173
++ LAS + E + N + N C P++ F ++ F KA + G
Sbjct: 13 VISGLASIDKMDEAYKFFNSMIDNGCE---------PDV-IAFTTLIHGFCKAGQPQVGH 62
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
L +A+++ RP V +Y +I+G+ K + D Y R V + DV+++ +I
Sbjct: 63 KLLNQALKRF---RPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIK 116
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G +K+ D A LF E++ GC+PNVV++ +I G + ++G+ EM C
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T +++DGLC + AC++ ++G +P Y L++ A +++
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D + KG P+ + +++ G +L EA ++ +M + G P F LL
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR +A ++ + +G PD + Y L+ R E ++ + M+++G PD TY
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356
Query: 474 NSYMDGLSN 482
+ + S
Sbjct: 357 GTIIQNFSK 365
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 33/324 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN-------- 238
P++ YN +I+G + D+A F++ M+ + +PDV+ F LI GFC+
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 239 ------KKF------------------DLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
K+F DL G FR + K + +V+S+ T+I+G +
Sbjct: 64 LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKA-SLDVISYTTVIKGLADSK 122
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE + E+ GC + V ++DGL GR+ + + S +P Y
Sbjct: 123 RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYT 182
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ LC A +V +++ +KG +P I TTLI+G + K EA L++ ML +
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P +VT+ ++ C + +A + +G +P + L+S Y + R +E
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Query: 455 ENLVNEMLDEGFIPDLATYNSYMD 478
++ EM G PD+ Y S +D
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLID 326
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 16/316 (5%)
Query: 113 LFIVRSLASSY----RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
LFI SL S Y R E + VL ++A C + D I ++ +F
Sbjct: 283 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC--APDVILYTSLIDLLF--------STG 332
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R+ + F++M + P Y +I F K + A + M + V PD +
Sbjct: 333 RVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 391
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L+ G+ + ++ D A G++ M G PN V+FN L+ G F + K D ++ EM+E
Sbjct: 392 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 451
Query: 289 LG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ V+ IL+DGL GRV +A + RG++P+ Y L+ L G
Sbjct: 452 KEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 511
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A ++V+++ K G P V A + LI GL A + ++M+K G P+ VT+ L
Sbjct: 512 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 571
Query: 408 EDLCDVGRTVDADRLR 423
GR +D + ++
Sbjct: 572 RGFRAAGRALDLEAVK 587
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 161/410 (39%), Gaps = 72/410 (17%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SC + ++ KA + D FE M + P Y LI+GF K + D+
Sbjct: 173 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDE 231
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A D M+ +P VT+ ++ GFC+ + A + +MRE+GC P + F +L+
Sbjct: 232 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 291
Query: 269 GFFGERKFDEGVNMAYEM-----------------------------------IELGCEF 293
+ + + +E + EM IE GC
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 351
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY----------------FGLV 337
++T ++ G V A E++ ++ GV P F Y FG+
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 411
Query: 338 EKLCG-------------------EGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRR 377
+++ +G A + E+ +K +P ++++ T LI+GL +
Sbjct: 412 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA ++M+ GI+P+ T+ L+ L GR +A +L G++PD
Sbjct: 472 AGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQA 531
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
Y L++G + ++ EM+ G P+ TY G A +++
Sbjct: 532 YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 581
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 43/277 (15%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR---- 310
GC P +VS+NT+I G K DE MI+ GCE + L+ G C G+
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 311 ------------------------VLKACELVIDFSRRGVLPKD----FDYFGLVEKLCG 342
KA +L + R V PK Y +++ L
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYF-RAVTPKASLDVISYTTVIKGLAD 120
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL--MEKMLKEGILPDS 400
A E+ +EL G P+V+A T +I+GL L+ G GL E+M +P
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGL--LKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+ +++ LC DA ++ KG PD +TY L+ G+++ ++ E L++
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238
Query: 461 MLDEGFIPDLATYNSYMDG------LSNARKSVRQTR 491
ML +G P TY S + G ++ A++ + Q R
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 275
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 155/293 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +F+ + ++M + D+ T++I I+ FCR + LAL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G + + T L+ GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL ++ ++ K V+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L +M +GI PD T++ L+ LC+ GR DA RL
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++P+ +T+ L+ + +E + E E L +EM+ PD+ TY+S ++G
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 153/293 (52%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y++ IN F + + AL +M++ +PD+VT + L++G+C +K+ A+ L +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G P+ +F TLI G F K E V + +M++ GC+ VT +V+GLC G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L+ + + Y +++ LC + AL + E+ KG P V ++LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + +AS L+ M++ I P+ VTF+ L++ G+ V+A++L + +D
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD TY L++G+ +R E +++ M+ + P++ TY++ + G A++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 1/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL P + + L+NG+ + A+ D+M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD TF LI G + K A+ L +M ++GC P++V++ T++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++DGLC + A L + +G+ P F Y L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY L+ G+ + R +EG
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM G + + TY + + G AR
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 141/266 (53%), Gaps = 8/266 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++AFVK ++ + ++ M ++ ID P + Y+ LINGF D+A ++
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+VVT++ LI GFC+ K+ + + LFREM ++G N V++ TLI GFF R
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ +G + +T IL+DGLC G++ KA + R + P + Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E +C G E+ L KG P+VIA T+I G R EA L++KM ++G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADR 421
LP+S T+N L+ R D DR
Sbjct: 569 PLPNSGTYNTLIR-----ARLRDGDR 589
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 162/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D L F M K I RP V Y+ LI+ + A
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGI--RPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ + A V ++ G P+++ L++GL + K +A + E + +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ + Y+ ++SG+ R+ ++E
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
++L+ +M ++G +P+ TYN+
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNT 578
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + + R++D + + M ++ +P + LI+G + +A+ D+MV+
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +++G C+ DLAL L ++M + +VV +NT+I G + D+ +
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G T L+ LCN GR A L+ D R + P + L++
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT++ L++ C R + L S +GL + +TY L+ G+ + + + +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ G P++ TYN +DGL
Sbjct: 459 MVSVGVHPNILTYNILLDGL 478
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 143/297 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C PNVV+++TLI+GF ++ +EG+ + EM + G ++VT L+ G
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A + GV P Y L++ LC G A+ V + L + P +
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + +N ++ C G +AD L
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 147/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ DVV +N +I G C+ K D AL
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG P+V ++++LI ++ + + +MIE + VT L+D
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P F Y L+ C A + + + K P+V+
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+TLI+G + ++ E L +M + G++ ++VT+ L+ +A +
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ P+ +TY+IL+ G + + + + + PD+ TYN ++G+ A K
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 180/384 (46%), Gaps = 13/384 (3%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + SE S++ + + S +F+ +
Sbjct: 5 TNSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + + R+ P + VL +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y+ ++ + FNIL+ FC++ +A +F + + G P+VVSFNTL+ G+
Sbjct: 124 YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A EL + +G++P
Sbjct: 184 LGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ + P +I TLI GL R +A L+++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVG--RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+G+ PD +T+ L++ C G T R R++ LD G Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVG--YTALISGLCQEGR 361
Query: 451 RKEGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G PD TY
Sbjct: 362 YLDAEKVLREMLSVGLKPDTITYT 385
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N K ++M+D F+ M + L+ P+ + LI+G K D A+ Y
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDKGLV---PNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ + PD++T+N LI G CR A L EM KG P+ +++ TLI G E
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ MI+ + V L+ GLC EGR L A +++ + G+ P Y
Sbjct: 326 DLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYT 385
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C +G+ +++ E+ + G +PSV+
Sbjct: 386 MIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 119
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C +G + A + ++ G+ P + L+
Sbjct: 120 VWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMN 179
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K +A+ L ++ML +G++P
Sbjct: 180 GYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVP 239
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTF L++ C GR A + ++ L PD +TY+ L+ G R+ K+ +L+
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLI 299
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM +G PD TY + +DG
Sbjct: 300 DEMSMKGLKPDKITYTTLIDG 320
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ K C +G+ +A V + + K G PSV++ TL+ G RL E L M G
Sbjct: 142 LMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASG 201
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ +ML + PDL TYN+ + GL + ++Q R
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCR-KGDLKQAR 296
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAI 162
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++++ L++GY R EG L M G PD+ TY+ ++GL K
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESK 221
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 165/331 (49%), Gaps = 9/331 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD---KALGF 212
+++ ++ K + + L M +++ P+V YN LI G C EF + +G
Sbjct: 217 VYNAILDGLCKRGLVGEALGLLHEM-GVVNVEPNVVTYNCLIQGL--CGEFGGWREGVGL 273
Query: 213 YDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ MV ++ + PDV TF+IL+ GFC+ A + M G PNVV++N+LI G+
Sbjct: 274 FNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYC 333
Query: 272 GERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ +E + + M+ G C S VT L+ G C V KA L+ + +G+ P
Sbjct: 334 LRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPD 393
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + L+ C A E+ + + G +P++ C +++GL + EA L
Sbjct: 394 VFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFR 453
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M+K G+ D V +N +L+ +C +G+ DA +L KGL D TY+I++ G RE
Sbjct: 454 AMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREG 513
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ E L+ +M + G P+ +YN ++ GL
Sbjct: 514 LLDDAEELLRKMKENGCPPNKCSYNVFVQGL 544
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 156/335 (46%), Gaps = 11/335 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN +N L E M L + Y L+NG K + AL +MV+
Sbjct: 152 VNGLCIEGDVNHALWLVEKMENL-GYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRN 210
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE-RKFDEG 279
+ P+VV +N ++ G C+ ALGL EM PNVV++N LI+G GE + EG
Sbjct: 211 LGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREG 270
Query: 280 VNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V + EM+ E G T ILVDG C EG +L+A +V R GV P Y L+
Sbjct: 271 VGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIA 330
Query: 339 KLCGEGNAGIALEVVDELWKKGN--LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
C A+ V + ++G LPSV+ +LI G ++++ +A L+ +M+ +G+
Sbjct: 331 GYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGL 390
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L+ C+V + + A L G P+ T +++ G + E
Sbjct: 391 DPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVT 450
Query: 457 LVNEMLDEGFIPDLATYNSYMDG------LSNARK 485
L M+ G D+ YN +DG L++ARK
Sbjct: 451 LFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARK 485
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +++L++GF K +A MVR V+P+VVT+N LI+G+C + + A+ +
Sbjct: 285 PDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRV 344
Query: 248 FREM-RE-KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
F M RE +GC P+VV+ N+LI G+ ++ D+ +++ EM+ G + T L+ G
Sbjct: 345 FGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGF 404
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C + L A EL G +P +++ L A+ + + K G +
Sbjct: 405 CEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDI 464
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +++G+ ++ K +A L+ +L +G+ DS T+N +++ LC G DA+ L
Sbjct: 465 VIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRK 524
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G P+ +Y++ V G R+ + M D+GF D T
Sbjct: 525 MKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATT 571
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 3/274 (1%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLI 267
A+ F+ RM+ P + FN+L +++ + A+ L + + G + +V + N I
Sbjct: 58 AVDFFHRMLTLTPFPCIQDFNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAI 117
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
RK G + M ++G E + VT +V+GLC EG V A LV G
Sbjct: 118 NCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYH 177
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
Y LV LC G+ ALE + ++ K+ P+V+ +++GL + EA GL
Sbjct: 178 CNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGL 237
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDV--GRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ +M + P+ VT+NCL++ LC G + + KG+ PD T+ ILV G+
Sbjct: 238 LHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGF 297
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E E++V M+ G P++ TYNS + G
Sbjct: 298 CKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAG 331
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 176/418 (42%), Gaps = 22/418 (5%)
Query: 76 HFLKSKLHHHPQFTHYDF-HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNF 134
H S HP T + H F+ + S T L +R+L ++ +
Sbjct: 6 HRTASTSRLHPLITSLFYSHPFSTSPPPISDAAHRTLLLNSIRTLETADAVVAVDFFHRM 65
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
++ P PC D F+ K+ + + + L DG V N
Sbjct: 66 LTLTPFPCIQD-----------FNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLN 114
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+ IN R+ M + ++P +VT N +++G C + AL L +M
Sbjct: 115 IAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENL 174
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G + N ++ L+ G + +M++ + V ++DGLC G V +A
Sbjct: 175 GYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEA 234
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA---GIAL--EVVDELWKKGNLPSVIACT 369
L+ + V P Y L++ LCGE G+ L E+V E KG +P V +
Sbjct: 235 LGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAE---KGIVPDVQTFS 291
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLAS 427
L++G + + A ++ M++ G+ P+ VT+N L+ C + +A R+ ++
Sbjct: 292 ILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVRE 351
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G P +T++ L+ G+ + + +L++EM+ +G PD+ T+ S + G +K
Sbjct: 352 GEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKK 409
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + + ++M + + F M + +G PSV +N LI+G+ K +E DKA+
Sbjct: 325 YNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSE 384
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + PDV T+ LI GFC KK A LF M+E G PN+ + ++ G
Sbjct: 385 MVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWL 444
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + M++ G + V I++DG+C G++ A +L+ +G+ + Y
Sbjct: 445 DSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNI 504
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC EG A E++ ++ + G P+ + ++GL R + ++ M +G
Sbjct: 505 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKG 564
Query: 396 ILPDSVTFNCLL 407
D+ T L+
Sbjct: 565 FPVDATTAELLI 576
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 186/422 (44%), Gaps = 48/422 (11%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA + + H+ + ++ L + F+EL S+L + E+ R
Sbjct: 203 FQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQG-----------REITR 251
Query: 156 -IFHFAVNAFVKANRMNDGLLAFEAMRK------LIDG---------------------- 186
+ H V ++ ++ R + L AF M++ LID
Sbjct: 252 SMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLF 311
Query: 187 ----RPSVSIYNVLINGFVKC----REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
VS N+ ++C + + A+ D M+++ PDVVT+ I+IS C+
Sbjct: 312 AQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKR 371
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
K + A G+ ++MRE GC PN+ ++N LI+G R+ +E + + M + G + T
Sbjct: 372 KMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTY 431
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL GLC R+ +A E+ + RG+ P Y L+ C A++++ E+ +
Sbjct: 432 TILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQ 491
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
P + TTLI+GL + + +A + ++M +G + T N L L VG D
Sbjct: 492 NDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKD 551
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A +G Y++ + + +E + L+ EM+++G+ P+L TYN+ +
Sbjct: 552 ASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIK 611
Query: 479 GL 480
G
Sbjct: 612 GF 613
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 17/332 (5%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
+++ D T+ ++ +L + + VL + N C P + + N
Sbjct: 352 NNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCE---------PNI-----YTYN 397
Query: 163 AFVK---ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
A ++ A R + L + + P++ Y +L +G K R D+A ++ +
Sbjct: 398 ALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALAR 457
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+KP+ VT+N L++G+CR + A+ + +EM + C P+ V++ TLI+G + +
Sbjct: 458 GLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDA 517
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M EM G + + T IL GL G A RG DY+ +
Sbjct: 518 LRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHC 577
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L G A ++ E+ KG P++ T+I+G R + +A ++ M++ GI PD
Sbjct: 578 LSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPD 637
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+ ++N L+++ + GRT DAD+L A +G+
Sbjct: 638 TGSYNILIKEFHNQGRTQDADQLYATALERGV 669
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 4/331 (1%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
N+G+ SC + + + F +M D + + M + + P V Y ++I+ K
Sbjct: 316 NNGV-SCNNL--TYTSMIQCFFLKEKMEDAMKLLDDMIQ-NNYAPDVVTYTIVISALCKR 371
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ ++A G +M + +P++ T+N LI G C ++ + AL L M + G PN+ ++
Sbjct: 372 KMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTY 431
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
L G R+ D M E + G + + VT L++G C R+++A +++ + +
Sbjct: 432 TILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQ 491
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
P Y L++ L AL + DE+ KG + L GL R+ +
Sbjct: 492 NDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKD 551
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
AS +M G + + + L G +A L KG P+ TY+ ++
Sbjct: 552 ASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIK 611
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
G+ R+ R + + ++N M++ G PD +YN
Sbjct: 612 GFCRQGRLDDADAMLNFMIENGIGPDTGSYN 642
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 13/333 (3%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK----ALGFYDR 215
AV+ + + +G +++R V +N K E D+ F +
Sbjct: 117 AVDIYQRKYPTKNGFNPSKSLRAKASANALVVQQEDTVNKICKAIEEDQWECLQDNFLNS 176
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGER 274
M +D + PD V + + +N AL F+ +++G + N ++ T+I +
Sbjct: 177 MAQD-LNPDAVVKVLNLQTDAQN-----ALRFFQWADKQEGYDHNTDAYFTMIDILGRAK 230
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK--DFD 332
F E ++ +M G E + V GR ++ E G P D
Sbjct: 231 MFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTA 290
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ L +A + ++ G + + T++I+ K +A L++ M+
Sbjct: 291 YNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMI 350
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ PD VT+ ++ LC A + G +P+ TY+ L+ G R +
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPE 410
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E LV M G P++ TY GL R+
Sbjct: 411 EALELVTLMEQGGVPPNIYTYTILTHGLCKLRR 443
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 13/320 (4%)
Query: 179 AMRKLIDGRPS------VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A +L++ PS +Y +I+GF + +A +++M+R + P + TFN L+
Sbjct: 164 AALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLM 223
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF-------GERKFDEGVNMAYE 285
C+ L ++ + G PN+ +FN I+G K E N ++
Sbjct: 224 HILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHK 283
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G E T ++ G G++ A ++ D +G +P +F Y L+ +C +G+
Sbjct: 284 MVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGD 343
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
AL + +E KG PS++ TLI+GL + ++A LM M KEG+ PD T+N
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
++ LC +G DA+ L A KG PD T++ L+ GY + + +++ M G
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG 463
Query: 466 FIPDLATYNSYMDGLSNARK 485
PD+ TYNS ++GL A K
Sbjct: 464 VTPDVITYNSILNGLCKAAK 483
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 181/393 (46%), Gaps = 17/393 (4%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
IF D F+H T+ ++ L F + VL + N +E
Sbjct: 26 IFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLN---------VDNSLLE 76
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ A+ + + ++ + + FE M + PS+ YN ++N V+ F++A Y
Sbjct: 77 GVYVSAMRNYGRKGKVQEAVDVFERM-DFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYL 135
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM + + PDV TF I I FCR K+ AL L M +GC N V + T+I GF+ E
Sbjct: 136 RMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEEN 195
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + +M+ LG T L+ LC +G + + +L+ + GV P F +
Sbjct: 196 YQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFN 255
Query: 335 GLVEKLCGEG-----NAGI--ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
++ LC +G N+ + A + ++ KG P T+I G ++ K +AS +
Sbjct: 256 IFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRI 315
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ +G +PD T+ L+ +C G A L A KGL P + Y+ L+ G ++
Sbjct: 316 LKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQ 375
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + L+N+M EG PD+ TYN ++GL
Sbjct: 376 QGLVLKALQLMNDMSKEGMSPDIWTYNLVINGL 408
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 148/304 (48%), Gaps = 11/304 (3%)
Query: 188 PSVSIYNVLINGFVKCRE---------FDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
P++ +N+ I G CR+ +A + +MV ++PD T+N +I G+ +
Sbjct: 249 PNLFTFNIFIQGL--CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKV 306
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
K A + ++ + KG P+ ++ +LI G + D + + E + G + S V
Sbjct: 307 GKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLY 366
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ GL +G VLKA +L+ D S+ G+ P + Y ++ LC G A +++
Sbjct: 367 NTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIA 426
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG LP + TLI+G + K A G+++ M G+ PD +T+N +L LC + D
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ KG P+ +TY+IL+ + + E +L+ E+ + G IPD ++ + +
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546
Query: 479 GLSN 482
G N
Sbjct: 547 GFCN 550
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 142/300 (47%), Gaps = 9/300 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR----VKPDVVTFNILISGFCRNKKFD 242
P YN +I G+ K + A R+++D PD T+ LI G C++ D
Sbjct: 290 EPDDFTYNTIIYGYSKVGKIQDA----SRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
AL LF E KG P++V +NTLI+G + + + + +M + G T +++
Sbjct: 346 HALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVI 405
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC G V A L+ +G LP F + L++ C A+ ++D +W G
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P VI +++ GL + K + + ++++G LP+ +T+N L+E LC + +A L
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-PDLATYNSYMDGLS 481
+GL PD +++ ++SG+ E L M + I +ATYN ++ S
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFS 585
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 1/295 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+PS+ +YN LI G + KAL + M ++ + PD+ T+N++I+G C+ A
Sbjct: 360 KPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN 419
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L KG P++ +FNTLI G+ K D + + M G +T +++GLC
Sbjct: 420 LLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLC 479
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ E +G LP Y L+E LC AL++++E+ +G +P +
Sbjct: 480 KAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPV 539
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV-TFNCLLEDLCDVGRTVDADRLRLL 425
+ T+I G EA L +M ++ + +V T+N ++ + A +L
Sbjct: 540 SFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHE 599
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG DPD TY +++ G+ + G + + + ++ GF+P L T+ ++ L
Sbjct: 600 MGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LI+G+ K + D A+G D M V PDV+T+N +++G C+ K + +
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMET 490
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+ + EKGC PN++++N LI RK E +++ E+ G V+ ++ G CN
Sbjct: 491 FKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCN 550
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG-NAGIALEVVDELWKKGNLPSVI 366
G + +A +L ++ + + ++ E + +A ++ E+ KG P
Sbjct: 551 NGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSY 610
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+I+G ++ + K ++ G +P TF ++ LC R +A + L
Sbjct: 611 TYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLM 670
Query: 427 STKGLDPDGMT 437
G+ P+ +
Sbjct: 671 VRTGVVPEAVV 681
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 13/224 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + KA ++ + L E +R LI P + +I+GF + D+A +
Sbjct: 506 YNILIESLCKARKVTEALDLLEEIRNRGLI---PDPVSFGTVISGFCNNGDLDEAYQLFR 562
Query: 215 RMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
RM + R+ V T+NI+I+ F D+A LF EM +KGC+P+ ++ +I GF
Sbjct: 563 RMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKV 622
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ G + + IE+G S T +++ LC + RV +A +V R GV+P+
Sbjct: 623 GNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE---- 678
Query: 334 FGLVEKLCGEGNAGIALE-VVDELWKKGNLPSVIACTTLIEGLR 376
+V + A A + +V++L KK ++ + A L +G+R
Sbjct: 679 -AVVTIFDADKKAVAAPKIIVEDLLKKSHI-TYYAYELLYDGIR 720
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ ++
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQIS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+J+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A ++ DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D+ F+ LI+ + + A+ +R +E + +J + F
Sbjct: 64 SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGF 123
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ VT
Sbjct: 184 LGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
F L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L +EM
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303
Query: 463 DEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 304 MKGLKPDKITYTTLIDG 320
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 201/432 (46%), Gaps = 46/432 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + FSE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P VV+
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSX 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E K D+ EM+
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLV 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DG C GRV A E+ + +LP Y L+ LC +G+
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +++D++ KG P I TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALIS 360
Query: 409 DLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC GR+VDA++ LR + S + L PD TY ++++ + ++ +G L+ EM +G
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVR-LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHA 419
Query: 468 PDLATYNSYMDG 479
P + TYN M+G
Sbjct: 420 PSVVTYNVLMNG 431
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ KGL P+G+T+ L+ G+ + R +
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAK 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGL 292
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 164/376 (43%), Gaps = 41/376 (10%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFD 207
+C E + VN+ KA + F M G RP+ IY LI+GF K
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA--SGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A +D MV +PDV+T ++I G C++ F+ A F EM GC PNVV++ T+I
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+G + + MI GC SVT L+DG C GR+ +A +L+ + +
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467
Query: 328 PKDFDYFGLVEKLCGEGNA--------------------GIALEVVDELWKKGNL----- 362
P Y LV+ LC G+ G+ ++ L K G L
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACR 527
Query: 363 -----------PSVIACTTLIEGLRRLRKG-VE-ASGLMEKMLKEGILPDSVTFNCLLED 409
P LI GL R R+ VE A L+ + G LPD+VT+ L
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIG 587
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC +G A ++ AS++G + D + Y L +G + + +L EM+ +G PD
Sbjct: 588 LCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPD 647
Query: 470 LATYNSYMDGLSNARK 485
A Y ++GL +K
Sbjct: 648 AAAYCCIINGLIKGKK 663
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 201/448 (44%), Gaps = 23/448 (5%)
Query: 38 TLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFA 97
T+ V L ++ H +R ++L P + Q+ S + L+S + T F
Sbjct: 57 TIKDVRLDGSSWSVHNIR----NVLGPVHGQVLGSHVAAVLRS-----LKVTGTAISFFR 107
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSV-LNFISANPCPCSNDGIFSCPEMERI 156
WA F+HD T+ ++ L + +S+ +++ + A P FS
Sbjct: 108 WAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAP----NTFS------- 156
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG-FYDR 215
F+ + +F + R +D + FE M++ +P + + +L++ K +KA F++
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEM 215
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V PD ++ + K+ A +F +M + G P+ +++NT+I G
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + M+ C + VT ILV+ LC G + +A EL + G P Y
Sbjct: 276 AQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS 335
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ G A + DE+ + G P VI T +I+GL + +A+ E+M++ G
Sbjct: 336 LIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG 395
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ VT+ +++ L +GR +A R+ G PD +TY L+ G+ + R E
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L++E+ P+L Y+S + GL +
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDG 483
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 160/338 (47%), Gaps = 9/338 (2%)
Query: 154 ERIFHFA-VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALG 211
+R H A V +KA R+ + F M K G P +I YN +I+G K +AL
Sbjct: 224 DRALHTAMVRTLLKAKRVKEAREVFGQMEKC--GFPPDAIAYNTMIDGLAKAGHAQEALK 281
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
D M+ P VT+ IL++ C+ + A LFR M G PN V + +LI GF
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ E ++ EM+E G +T +++DGLC G +A + + R G P
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +++ L G A ++ + G P + L++G +L + EA+ L++++
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Query: 392 LKEGILPDSVTFNCLLEDLCDVG---RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
K P+ ++ L++ LCD G T+D + A+ + LDP G+ I+V G +
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP-GLCCSIIV-GLCKT 519
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
R E + M+ EG PD TYN ++GL +R++
Sbjct: 520 GRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSREN 557
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 131/294 (44%), Gaps = 3/294 (1%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK--KFDLALGLFREMRE 253
+I G K D+A + RMV + KPD T+NILI+G CR++ + + A L ++
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P+ V++ L G + D V M E G V L GLC +G+V +
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A L + R+G P Y ++ L A + DE+ KG P+V T L++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSV-TFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L EA E ML G L SV ++ L+ C + A +L ++G
Sbjct: 692 ALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
P +T L G R + ++ + L+ EM G P AT+ + +DGL + +S
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDES 805
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 6/304 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE--FDKALGFYDRMV 217
+ K R+++ F+ R + +G +P + YN+LING + RE ++A +
Sbjct: 513 IVGLCKTGRLDEACRIFQ--RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
PD VT+ L G C+ + D A+ + E +G N +VV++ L G + + D
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
V++ EM+ G + +++GL ++ AC+ + +G P Y LV
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 338 EKLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC GN A + + +G L SV+ LI G + K A L E M+ G
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P +VT L + L G+T A L + G P T+ ++ G + + +
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810
Query: 457 LVNE 460
LV E
Sbjct: 811 LVQE 814
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 155/335 (46%), Gaps = 38/335 (11%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + F+A+ K RPSV YN L+NG+++
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKW-GLRPSVVSYNTLMNGYIRLG 174
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ M+ V+PDV T+++LI+G C+ K D A LF EM KG PN V F
Sbjct: 175 DLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFT 234
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI DG C GRV A E+ +
Sbjct: 235 TLI-----------------------------------DGHCKNGRVDLAMEIYKQMLSQ 259
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
+ P Y L+ LC +G+ A ++DE+ KG P I TTLI+G + A
Sbjct: 260 SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSA 319
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++M++E D V + L+ LC GR+VDA+++ + GL PD TY ++++
Sbjct: 320 FEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINE 379
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++ +G L+ EM +G +P + TYN M+G
Sbjct: 380 FCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 158/385 (41%), Gaps = 44/385 (11%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFHFA--VN 162
++ ++ L + SE S++ + + S +F+ + J+ F+ +
Sbjct: 4 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLIT 63
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + + P + VL +K + F GFY+ ++
Sbjct: 64 AYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYEEILECGYP 122
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC++ JA +F + + G P+VVS+NTL+ G+ DEG +
Sbjct: 123 ASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 182
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ GV P + Y L+ C
Sbjct: 183 KSAMLA-----------------------------------SGVQPDVYTYSVLINGXCK 207
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
E A E+ DE+ KG +P+ + TTLI+G + + A + ++ML + + PD +T
Sbjct: 208 ESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 267
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N L+ LC G A L S KGL PD +TY L+ G +E M+
Sbjct: 268 YNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMI 327
Query: 463 DEGFIPDLATYNSYMDGLSNARKSV 487
E D Y + + GL +SV
Sbjct: 328 QENXRLDEVXYTALISGLCXEGRSV 352
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 155/295 (52%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K + A +D + + ++P V++N L++G+ R D
Sbjct: 112 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEG 171
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM+ G + VT L+DG
Sbjct: 172 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDG 231
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + +LP Y L+ LC +G+ A +++D++ +KG P
Sbjct: 232 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPD 291
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + V A +++++E I D V + L+ LC GR+VDA+++
Sbjct: 292 KITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 351
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL+PD TY ++++ + ++ +G L+ EM +G +P + TYN M+G
Sbjct: 352 EMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 172/364 (47%), Gaps = 9/364 (2%)
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFHFA--VNAFVKANRM 170
L + FSE S+L + + S +F+ + I+ F+ + A++++ +
Sbjct: 4 LCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFL 63
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D + + RK P + VL +K + F GFY+ ++ + FNI
Sbjct: 64 RDAIECYXLTRKHKLWVPFDTCRKVL-EYLMKLKYFKLVWGFYEEILECGYPASLYFFNI 122
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ FC++ +A +F + + G P+ VS+NTL+ G+ DEG + M+ G
Sbjct: 123 LMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG 182
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ T +L++GLC E ++ A EL + +G++P + L++ C G +A+
Sbjct: 183 VQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 242
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E+ ++ + LP +I TLI GL + +A L++ M ++G+ PD +T+ L++
Sbjct: 243 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGC 302
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G V A R + + D + Y L+SG +E R + E ++ EML G PD
Sbjct: 303 CKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDT 362
Query: 471 ATYN 474
TY
Sbjct: 363 GTYT 366
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D A+ Y +
Sbjct: 190 YSVLINGLCKESKMDDADELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 247
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L +M KG P+ +++ TLI G E
Sbjct: 248 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGV 307
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+I+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 308 LVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTM 367
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ +++ E+ + G++PSV+ L+ G
Sbjct: 368 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PS ++ TL+ G RL E L ML G
Sbjct: 123 LMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG 182
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DAD L KGL P+G+T+ L+ G+ + R
Sbjct: 183 VQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 242
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 243 EIYKQMLSQSLLPDLITYNTLIYGL 267
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 107 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLM------- 159
Query: 345 NAGIALEVVDE-------LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
N I L V+DE + G P V + LI GL + K +A L ++ML +G++
Sbjct: 160 NGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLV 219
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L
Sbjct: 220 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL 279
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
+++M +G PD TY + +DG
Sbjct: 280 IDDMSRKGLKPDKITYTTLIDG 301
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 84 TCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 143
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 144 TKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 202
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 147/286 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y+ LI GF + +A G + M+ + P+V T+ IL+ C+ K A L
Sbjct: 183 PNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNL 242
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G PNVVS+NTL+ G+ + M + M++ G + + I++D LC
Sbjct: 243 LAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCK 302
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A L+ + + ++P Y L++ C G AL+++ E++ +G V+
Sbjct: 303 SKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L++ L + + +A+ L KM + GI P+ T+ L++ LC GR +A +L
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
KG + TY++++SG +E E + ++M + G IPD T+
Sbjct: 423 VKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 2/307 (0%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +R + D RP+V +YN +I+G K + ++A Y M + P+V+T++ LI
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GFC + A GL EM K NPNV ++ L+ E K E N+ M + G +
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V+ L+DG C G V A ++ ++GV P + Y ++++LC A+ ++
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ K +P+ + ++LI+G +L + A L+++M G D VT+ LL+ LC
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKN 373
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
A L + +G+ P+ TY L+ G + R K + L +L +G ++ TY
Sbjct: 374 QNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTY 433
Query: 474 NSYMDGL 480
N + GL
Sbjct: 434 NVMISGL 440
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREM 251
Y L+NG K E AL RM+ DR +P+VV +N +I G C++K + A L+ EM
Sbjct: 118 YATLLNGLCKIGETRSALKLL-RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+G PNV++++TLI GF + E + EMI + T IL+D LC EG+V
Sbjct: 177 DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKV 236
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A L+ ++ GV P Y L++ C G A ++ + +KG P+V + +
Sbjct: 237 KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIM 296
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+ L + ++ EA L+ ++L + ++P++VT++ L++ C +GR A L +G
Sbjct: 297 IDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQ 356
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY L+ + + L +M + G P+ TY + +DGL
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 156/303 (51%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L+ P + +N ++ VK + + A+ + +M ++PD+ T NILI+ FC +
Sbjct: 3 LVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMT 62
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
+ + ++ + G PN ++ NTL++G + + + ++ +++ G + V+ L+
Sbjct: 63 FSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL 122
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC G A +L+ R P Y +++ LC + A ++ E+ +G
Sbjct: 123 NGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+VI +TLI G + +EA GL+ +M+ + I P+ T+ L++ LC G+ +A L
Sbjct: 183 PNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNL 242
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ + +G+ P+ ++Y+ L+ GY + + + + M+ +G P++ +YN +D L
Sbjct: 243 LAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCK 302
Query: 483 ARK 485
+++
Sbjct: 303 SKR 305
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F +M + KL +P+ N L+ G E K+L F+D++
Sbjct: 48 LNILINCFCHLGQMTFSFTVLGKILKL-GYQPNTITLNTLMKGLCLKGEVKKSLHFHDKV 106
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V + D V++ L++G C+ + AL L R + ++ PNVV +NT+I G ++
Sbjct: 107 VAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E ++ EM G + +T L+ G C G++++A L+ + + + P + Y L
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTIL 226
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC EG A ++ + K+G P+V++ TL++G + + A + M+++G+
Sbjct: 227 MDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGV 286
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ ++N +++ LC R +A L K + P+ +TY L+ G+ + R +
Sbjct: 287 NPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALD 346
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM G D+ TY S +D L
Sbjct: 347 LLKEMYHRGQPADVVTYTSLLDAL 370
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 141/280 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y +L++ K + +A M ++ VKP+VV++N L+ G+C + A +
Sbjct: 218 PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQM 277
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M +KG NPNV S+N +I ++ DE +N+ E++ ++VT L+DG C
Sbjct: 278 FHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCK 337
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A +L+ + RG Y L++ LC N A + ++ ++G P+
Sbjct: 338 LGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYT 397
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+GL + + A L + +L +G + T+N ++ LC G +A ++
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G PD +T+ I++ +++ + E L++EM+ + +
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN L++G+ E A + MV+ V P+V ++NI+I C++K+ D A+
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L RE+ K PN V++++LI GF + +++ EM G VT L+D LC
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ KA L + RG+ P + Y L++ LC G A ++ L KG +V
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVW 431
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+I GL + EA + KM + G +PD+VTF ++ L + + A++L
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
K L +H G N + E L++EM+ +G +
Sbjct: 492 IAKDL-LRFRDFH----GERSPNENDKAEKLLHEMIAKGLL 527
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 146/286 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN LI+ + K R KA D MVR +K D T N L+ C+ K+++ A L
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R ++G P+ VS+ T++ +F E K + + + EM + S T L+ GLC
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A + + + ++G++P D Y ++ C EG+ A + +++ + P V+
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C TL+ GL K +A L E ++G D +T+N L++ LC G A
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADME 658
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+GL PD TY++++S + R +E +N+++++ + G + + +Y
Sbjct: 659 ARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY 704
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +A ++++ + M L P V YN L++ K + AL + M
Sbjct: 318 YNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEM 377
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VK +VT NI++ G CR + + ALG + M E+G P+V+++NTLI + R
Sbjct: 378 RDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNV 437
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ G + + T L+ LC E R +A EL+ +RG +P + Y +
Sbjct: 438 AKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTV 497
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ E AL + DE+ K+ PS+ TLI+GL + K EA + +++K+G+
Sbjct: 498 MAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGL 557
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD T+N ++ C G A + PD +T + L++G + ++
Sbjct: 558 VPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIK 617
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L ++G D+ TYN+ + L
Sbjct: 618 LFESWAEKGKKVDVITYNTLIQAL 641
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 199/472 (42%), Gaps = 74/472 (15%)
Query: 36 PVTLPSVTLTPTAH-HTHLLRFLKTHLLTPTNNQIT--------PSSLLHFLKSKLHHHP 86
P+ L V L P H H HLL L T L + LLH + + H P
Sbjct: 112 PLLLDFVPLDPLRHLHRHLLASLPTSALADAALSAYARLRLPHLAAQLLHSFRRRGHVRP 171
Query: 87 QFTHYDFHIFAWA--------STIDSFRH--------DHTTFLFIVRSLASSYRFSELHS 130
+ + A A +++D FR +H TF +V + S ++ S
Sbjct: 172 SLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALS 231
Query: 131 VLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPS 189
L+ + G P++ ++ + A + + + M+K +G P+
Sbjct: 232 TLSTMQ---------GFGLSPDV-VTYNTLLKAHCRKGMLGEARTLLARMKK--EGIAPT 279
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ YN L++ + + +A + M +PD+ T+N+L +G C+ K D A L
Sbjct: 280 RATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKD 339
Query: 250 EMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM +P+VV++NTL+ F ++ + +N+ EM + G + S VT I+V GL
Sbjct: 340 EMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGL--- 396
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
C EG AL + + ++G P VI
Sbjct: 397 --------------------------------CREGQLEEALGRLKMMTEEGLAPDVITY 424
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TLI+ + R +A LM++M++ G+ D+ T N LL +LC R +A+ L
Sbjct: 425 NTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQ 484
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G PD ++Y +++ Y +EN+ + L +EM P + TYN+ + GL
Sbjct: 485 RGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGL 536
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++A+ K + AF+ K+++ +P V N L+NG + +KA+ ++
Sbjct: 564 YNIIIHAYCKEGDLEK---AFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFE 620
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
K DV+T+N LI C++ D AL F +M +G P+ ++N ++
Sbjct: 621 SWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 680
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP--KDFD 332
+ +E NM +++ E G + S L+ E + K E+ D G
Sbjct: 681 RSEEAQNMLHKLDESG-KLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQES 739
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL-RRLRKGVEASG 386
Y V++LC G A V+DE+ +KG TL+EGL +R ++ A+G
Sbjct: 740 YNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQTHAAG 794
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EAS 385
P + + LV C +G AL + + G P V+ TL++ RKG+ EA
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKA--HCRKGMLGEAR 265
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+ +M KEGI P T+N L+ +G A + + G +PD TY++L +G
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325
Query: 446 TRENRRKEGENLVNEMLDEGFI-PDLATYNSYMDGLSNARKS 486
+ + E L +EM + PD+ TYN+ +D ++S
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRS 367
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 178/379 (46%), Gaps = 9/379 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH ++ ++ L + FSE S++ + + S +F+ + I+
Sbjct: 8 TFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ + D + + R+ P + +L VK + F+ FY+
Sbjct: 68 VFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKML-EHLVKLKYFNLVWAFYEE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC+ LA +F + + G P+VVS+NTL+ G+
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+EG + M G + T +L++GLC E ++ A EL + +G++P +
Sbjct: 187 LNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A+EV ++ + LP +I TLI GL + +A LM++M +G
Sbjct: 247 LIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ L++ C G A R + + D + Y L+SG +E R + E
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 366
Query: 456 NLVNEMLDEGFIPDLATYN 474
++ EML G PD TY
Sbjct: 367 KMMREMLSFGLKPDTGTYT 385
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D FE M L+ G P+ + LI+G K D A+ Y +
Sbjct: 209 YSVLINGLCKESKMDDANELFEEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQ 266
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ + A L EM KG P+ +++ TLI G E
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGD 326
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 327 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTM 386
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C +G+ +++ E+ + G+ PSV+
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C EG+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 133 PASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFK 192
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHC 252
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + +PDL TYN+ + GL
Sbjct: 253 KNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGL 286
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F+
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAVECYRLTRE---HKFWVPFDTCKKMLEHLVKLKYFNL 119
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C EG + A + ++ G+ P Y L+
Sbjct: 120 VWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMN 179
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ ++ + G P V + LI GL + K +A+ L E+ML +G++P
Sbjct: 180 GYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVP 239
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ + +L+
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLM 299
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM +G PD TY + +DG
Sbjct: 300 DEMSMKGLKPDKITYTTLIDG 320
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ E++L+ G FN L+ C G A +
Sbjct: 103 TCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAI 162
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 163 TKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESK 221
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 161/310 (51%), Gaps = 12/310 (3%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGF-VKCREFDK---------ALGFYDRMVRDRVKP 223
AF + K++ +P+ N LI G + + DK A+ +++M+ + + P
Sbjct: 116 AFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINP 175
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
DV TF IL+ GFC+ + A + M +G P VV++N+L+ G+F ++ ++ ++
Sbjct: 176 DVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIF 235
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M +LG + IL++G C + +A EL+ + + ++P Y L++ LC
Sbjct: 236 NTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKS 295
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G AL++VDE+ +G P+++ +++++ L + + A L+ +M +GI P+ T+
Sbjct: 296 GKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTY 355
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ LC G+ DA ++ KG + + TY +++ G+ + E L+++M D
Sbjct: 356 TILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMED 415
Query: 464 EGFIPDLATY 473
G IP+ TY
Sbjct: 416 NGCIPNAKTY 425
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 1/306 (0%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
++ D + F M L + P V + +L++GF K +A M+ +KP VVT+
Sbjct: 157 KLKDAVDLFNKMI-LENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTY 215
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L+ G+ K+ + A +F M + G +P++ S++ LI GF + DE + + EM
Sbjct: 216 NSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHH 275
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+ VT L+DGLC G++ A +LV + RG P Y +++ LC
Sbjct: 276 KQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDN 335
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A+ ++ ++ +G P++ T LI+GL + K +A + E +L +G + T+ +++
Sbjct: 336 AIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQ 395
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
CD G +A L G P+ TY I++ +++ + E L+ EM++ F
Sbjct: 396 GFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDG 455
Query: 469 DLATYN 474
+A N
Sbjct: 456 RVALTN 461
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 10/306 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK------ 240
+P++ N+LIN F + A ++++ KP+ +T N LI G C N K
Sbjct: 94 KPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHC 153
Query: 241 ----FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
A+ LF +M + NP+V +F L+ GF E + E N+ M+ G + V
Sbjct: 154 IVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV 213
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+DG +V KA + ++ GV P Y L+ C A+E++ E+
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K +P+V+ ++LI+GL + K A L+++M G P+ VT++ +L+ LC +
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A L +G+ P+ TY IL+ G + + ++ + ++L +G ++ TY
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVM 393
Query: 477 MDGLSN 482
+ G +
Sbjct: 394 IQGFCD 399
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 155/333 (46%), Gaps = 11/333 (3%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F N ++D + F + + P++ +N ++ VK + + L +M +K
Sbjct: 36 TFHNNNDVDDAVSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIK 94
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK------- 275
P++V NILI+ FC+ A + ++ + G PN ++ NTLI+G K
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 276 ---FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ V++ +MI T ILVDG C EGRV +A ++ +G+ P
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ A + + + + G P + + + LI G +++ EA L+++M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ I+P+ VT++ L++ LC G+ A +L +G P+ +TY ++ + ++
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ +M ++G P++ TY + GL + K
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGK 367
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + ++N F M +L P + Y++LINGF K + D+A+ M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQL-GVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+VVT++ LI G C++ K AL L EM ++G PN+V++++++ +
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + +M G + + T IL+ GLC G++ A ++ D +G + Y +
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVM 393
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ C +G AL ++ ++ G +P+ +I L + + A L+ +M++
Sbjct: 394 IQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 154/330 (46%), Gaps = 3/330 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
C ++ ++AFVKA L + M + G RP +NVL+N F K + D
Sbjct: 85 CALTASAYNSLIDAFVKAGYTQKALAVYRVMGQ--SGLRPDTYTFNVLMNAFKKAKRVDS 142
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
++ M P+V+T++ILI C+ + AL +F +M+ +GC PN+ ++ ++I
Sbjct: 143 VWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID 202
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G D+ + EM G + V L+ GL GR A +L + +G+ P
Sbjct: 203 GLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQP 262
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ LV L G A A + E G V LI+ L + ++ EA +
Sbjct: 263 DHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIF 322
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++ ++G++PD TFN L++ LC GR DA L G PD Y+ L+ G +
Sbjct: 323 GELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKS 382
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
R +E L+ EM G+ PD+ TYN+ +D
Sbjct: 383 GRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 39/365 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK------------LIDG------------------ 186
F+ +NAF KA R++ FE M+ LID
Sbjct: 127 FNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
RP++ Y +I+G K DKA ++ M + + V +N LI G R+ + D
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRAD 246
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A LFREM KG P+ V+F +L+ G + E + E ++GC +L+
Sbjct: 247 AAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLI 306
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
D LC R+ +A E+ + G++P + + L++ LC G A ++ ++ + G
Sbjct: 307 DTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCT 366
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P V TLI+GLR+ + EA L+ +M G PD VT+N L+++ C GR DA RL
Sbjct: 367 PDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRL 426
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE---GFI-PDLATYNSYMD 478
S KG + +TY+ +++G R E L N M E G I PD TY + ++
Sbjct: 427 FEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLN 485
Query: 479 GLSNA 483
G A
Sbjct: 486 GARQA 490
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
I+ L G+ +K++ RM R +N LI F + AL ++R M
Sbjct: 56 IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ G P+ +FN L+ F ++ D + EM C + +T IL+D +C G V
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
KA ++ +D RG P F Y +++ L G+ A + +E+ +G + + + +L
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL R + A+ L +ML +G+ PD VTF L+ L GR +A R+ A G
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D Y++L+ + R E + E+ ++G +PD+ T+N+ MDGL
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGL 344
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ G AL V + + G P L+ ++ ++ L E+M
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P+ +T++ L++ +C G A ++ L ++G P+ TY ++ G +
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVD 211
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ L EM EG + YNS + GL + ++
Sbjct: 212 KAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F ++ ++ L+ F ++++ LI P IY +LI G+ + A+ +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLI---PDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ DVVT+N ++ G C+ K A LF EM E+ P+ + LI G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +M E VT L+DG G + A E+ D + +LP Y
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LV LC +G+ A V DE+ K P+V+ C ++I+G R + +EKM+ E
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G +PD +++N L+ A L ++ GL PD TY+ ++ G+ R+N+ K
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E E ++ +M++ G PD +TY ++G
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 39/343 (11%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRD------------- 219
AFE M + G+ P V YN +ING K ++++A + M+R
Sbjct: 289 AFELMNAM-PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 220 ----------------------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
V PD+V F+ ++S F R+ D AL F ++E G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P+ V + LI+G+ + +N+ EM++ GC VT ++ GLC + +A +L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + R + P + L++ C GN A+E+ ++ +K V+ TL++G +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ A + M+ + ILP ++++ L+ LC G +A R+ +K + P M
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ GY R +GE+ + +M+ EGF+PD +YN+ + G
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 17/384 (4%)
Query: 100 STIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHF 159
ST + + + F ++R+ + + E H + + S D
Sbjct: 156 STFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID-------------- 201
Query: 160 AVNAFVKA-NRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRM 216
A NA + + R+ LA+ +++ +++Y N+++N K + +K F ++
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD+VT+N LIS + + A L M KG +P V ++NT+I G K+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ G S T L+ C +G V++ ++ D R V+P + +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ GN AL + + + G +P + T LI+G R A L +ML++G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VT+N +L LC +AD+L + + L PD T IL+ G+ + +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L +M ++ D+ TYN+ +DG
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGF 525
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 161 VNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K + + + F+ M+ K I R V YN L++GF K + D A + MV
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRI--RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P ++++IL++ C A ++ EM K P V+ N++I+G+ +G
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +MI G ++ L+ G E + KA FGLV+K
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA-------------------FGLVKK 645
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+ E + G +P V +++ G R + EA ++ KM++ G+ PD
Sbjct: 646 M--------------EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
T+ C++ +A R+ +G PD
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ VNA + + AF ++I +P+V I N +I G+ + F +
Sbjct: 553 YSILVNALCSKGHLAE---AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK--GCNPNVVSFNTLIRGFFG 272
+M+ + PD +++N LI GF R + A GL ++M E+ G P+V ++N+++ GF
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + E + +MIE G T +++G ++ + +A + + +RG P D
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E L KG S+ AC LI L R+ A G+ +++ + G+ + T N ++
Sbjct: 184 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G+ KG+ PD +TY+ L+S Y+ + +E L+N M +GF P
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 469 DLATYNSYMDGLSNARKSVR 488
+ TYN+ ++GL K R
Sbjct: 304 GVYTYNTVINGLCKHGKYER 323
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + +E +++ + + S +F+ ++
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQIS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+I+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K ++ + EM+ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A ++ DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
D+ F+ LI+ + + A+ +R +E + +I + F
Sbjct: 64 SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGF 123
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 124 YEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ VT
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVT 243
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
F L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L +EM
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303
Query: 463 DEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 304 MKGLKPDKITYTTLIDG 320
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 NNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 6/323 (1%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV--LINGFVKCREFDKALGFYDRMVRD 219
N K R + LAF RK+++ ++ ++ L+ +V+ R+ A G M++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+V NIL+ G CRN + A+ L REMR P+V S+NT+IRGF ++ ++
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +A EM GC +S VT IL+D C G++ +A + + G+ Y L+
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 340 L--CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
CGE + G AL DE+ ++G+ P I TLI G +L + EAS + E M++ G+
Sbjct: 257 FCDCGELDRGKAL--FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ T+ L++ LC VG+T +A +L L K +P+ +TY+I+++ ++ + +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
V M PD TYN + GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGL 397
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN +I GF + +E +KAL + M +VT+ ILI FC+ K D A+G
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM+ G ++V + +LIRGF + D G + E++E G ++T L+ G C
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A E+ RGV P + Y GL++ LCG G AL++++ + +K P+ +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+I L + +A ++E M K PD++T+N LL LC G +A +L +L
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ DPD ++Y+ L+ G +ENR + ++ + ++++ D T N
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 2/290 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+L+ G + E KA+ M R+ + PDV ++N +I GFC K+ + AL L EM+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
GC+ ++V++ LI F K DE + EM +G E V L+ G C+ G +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ L + RG P Y L+ C G A E+ + + ++G P+V T LI
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + K EA L+ M+++ P++VT+N ++ LC G DA + L +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEML-DEGFI-PDLATYNSYMDGL 480
PD +TY+IL+ G + E L+ ML D + PD+ +YN+ + GL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 156/356 (43%), Gaps = 38/356 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF KA +M++ + + M K + + +Y LI GF C E D+ +D ++
Sbjct: 219 IDAFCKAGKMDEAMGFLKEM-KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P +T+N LI GFC+ + A +F M E+G PNV ++ LI G G K E +
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MIE E ++VT I+++ LC +G V A E+V +R P + Y L+ L
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 341 CGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEG 395
C +G+ A +++ + K + P VI+ LI GL RL + ++ L+ + L G
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 396 --------------------------------ILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I+ +S T+ +++ C G A L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L P Y+ L+S +E + L EM + PD+ ++N +DG
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 16/335 (4%)
Query: 151 PEMERIFHFAVNAFVKAN-----RMNDGLLAF----EAMRKL-----IDGRPSVSIYNVL 196
E IF F + V+ N + DGL EA++ L D P+ YN++
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
IN K A+ + M + R +PD +T+NIL+ G C D A L M +
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 257 --NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+P+V+S+N LI G E + + +++ ++E VT IL++ G V KA
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
EL S ++ Y +++ C G +A ++ ++ PSV L+
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + +A L E+M ++ PD V+FN +++ G A+ L + S GL PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++ + + E + ++M+D GF PD
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 139/319 (43%), Gaps = 17/319 (5%)
Query: 180 MRKLIDGRPSVSIYNVLINGF----VKCR--------EFDKALGFYDRMVRDRVKPDVVT 227
+RKL++ R +Y+ L+N F K R + A+ + + V D
Sbjct: 20 VRKLLNPR----VYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAV-DSGSSLAFA 74
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
N L++ R++ +LA +R+M E N VS + L+ + RK + M+
Sbjct: 75 GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G F+ IL+ GLC KA L+ + R ++P F Y ++ C
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
ALE+ +E+ G S++ LI+ + K EA G +++M G+ D V + L+
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
CD G L +G P +TY+ L+ G+ + + KE + M++ G
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 468 PDLATYNSYMDGLSNARKS 486
P++ TY +DGL K+
Sbjct: 315 PNVYTYTGLIDGLCGVGKT 333
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K NR++ L ++ + + + V+ N+L+N +K + +KA+ + ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQI 485
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + T+ +I GFC+ ++A GL +MR P+V +N L+ E
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM V+ I++DG G + A L++ SR G+ P F Y L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ + G A+ D++ G P C ++++ + + + L++K++ + I
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+ D +++ +C+ +D + RLL T
Sbjct: 666 VLDKELTCTVMDYMCNSSANMDLAK-RLLRVT 696
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E ++ + + S +F+ ++
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQIS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+I+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A ++ DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D+ F+ LI+ + + A+ +R +E + +I + F
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ VTF
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L +EM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSM 304
Query: 464 EGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 305 KGLKPDKITYTTLIDG 320
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEV 352
TC +++ L LK +LV F + P +F L+ EG +A V
Sbjct: 103 TCRKVIEHLMK----LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSV 158
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
D + K G PSV++ TL+ G +L E L M G+ PD T++ L+ LC
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCK 218
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ DA+ L GL P+G+T+ L+ G+ + R + +ML + PDL T
Sbjct: 219 ESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLIT 278
Query: 473 YNSYMDGL 480
YN+ + GL
Sbjct: 279 YNTLIYGL 286
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 146/284 (51%), Gaps = 1/284 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
IYN +NG+ + + +KA+ +RM ++P+ +TFN LI FC K+ D A ++M
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
EKG P+V ++NTLI G+ FD + +M E+G + + V+ L++ LC +G++
Sbjct: 448 AEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
L+A ++ D RGVLP Y L++ C G AL DE+ + P+++ L
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVL 567
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+GL + K EA + ++ G PD +T+N L+ + G L G+
Sbjct: 568 IDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
P TYH L+SG ++E E L NEML +PD YN+
Sbjct: 628 KPTVRTYHPLISGCSKEGIELV-EKLYNEMLQMNLLPDRVVYNA 670
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 175/400 (43%), Gaps = 71/400 (17%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ A+ A VK + G+ ++MRK RP+V IYNVLI G + + A +D
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKR-GVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + +VT+N LI G+C+ + D A + M+EK PN+++FN+L+ G RK
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296
Query: 276 FDEGVNMAYEM-----------------------------------IELGCEFSSVTCEI 300
E ++ EM E G ++ T I
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI 356
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY-------------------------FG 335
L++GLC +G+V KA E++ F+ G++ + Y FG
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 336 L----------VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
L ++K C A E V ++ +KG PSV TLI+G +L
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++E+M + G+ P+ V++ L+ LC G+ ++A+ + +G+ P+ Y++L+ G
Sbjct: 477 QILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ K+ +EM+ P L TYN +DGL K
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 193/449 (42%), Gaps = 81/449 (18%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
FR D TF++ +++ ++ + L + F+ + +F I++ +
Sbjct: 172 FRTD--TFMY-AKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVF-------IYNVLIGGL 221
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ R+ D F+ M I+ S+ YN LI+G+ K E D A +RM V P+
Sbjct: 222 CREKRIRDAEKMFDEMCN-INLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
++TFN L+SG C+ +K A L +EM G P+ +++ L G + + +
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE 340
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY----------- 333
+ E G ++ T IL++GLC +G+V KA E++ F+ G++ + Y
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400
Query: 334 --------------FG----------LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
FG L++K C A E V ++ +KG PSV
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460
Query: 370 TLIEGLRRL-----------------------------------RKGVEASGLMEKMLKE 394
TLI+G +L K +EA ++ M+
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR 520
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+LP++ +N L++ C VG+ DA R + P +TY++L+ G ++ + E
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E+ + ++ G PD+ TYNS + G +NA
Sbjct: 581 EDFLTQITSSGHSPDVITYNSLISGYANA 609
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 161/360 (44%), Gaps = 35/360 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E I++ VN + + MN +L E M RP+ +N LI+ F +E DKA +
Sbjct: 386 EVIYNTFVNGYCRIGDMNKAILTIERMESF-GLRPNSITFNSLIDKFCDMKEMDKAEEWV 444
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M V P V T+N LI G+ + FD + +M E G PNVVS+ +LI +
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K E + +MI G ++ +L+DG C G+V A + R + P Y
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTY 564
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG----------------LRR 377
L++ LC +G A + + ++ G+ P VI +LI G ++
Sbjct: 565 NVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKN 624
Query: 378 L-----------------RKGVE-ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
L ++G+E L +ML+ +LPD V +N ++ ++G T A
Sbjct: 625 LGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKA 684
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L +G+ PD MTY+ L+ G+ RE + ++LVN M + P TY+ + G
Sbjct: 685 YSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 8/318 (2%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R +DG A E + + ++ Y ++L+NG K + +KA + + + D V
Sbjct: 328 RCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEV 387
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N ++G+CR + A+ M G PN ++FN+LI F ++ D+ +M
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447
Query: 287 IELGCEFSSVTCEILVDG---LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
E G S T L+DG LC R + E + + GV P Y L+ LC +
Sbjct: 448 AEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI---GVKPNVVSYGSLINCLCKD 504
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A V+ ++ +G LP+ LI+G + K +A ++M++ I P VT+
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTY 564
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L++ LC G+ +A+ ++ G PD +TY+ L+SGY + L M +
Sbjct: 565 NVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKN 624
Query: 464 EGFIPDLATYNSYMDGLS 481
G P + TY+ + G S
Sbjct: 625 LGIKPTVRTYHPLISGCS 642
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
++F K + + + + D + I + + + + MR++G PNV +
Sbjct: 155 KQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIY 214
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI G E++ + M EM + S VT L+DG C G + A ++
Sbjct: 215 NVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ V P + L+ LC A ++ E+ G +P + L +GL R G
Sbjct: 275 KSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNG 334
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L E+ ++GI ++ T + LL LC G+ A+ + + GL D + Y+ V+
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GY R + + M G P+ T+NS +D + ++
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%)
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
NE + +K +L ++ G F Y ++ N + +E +D + K+G P+V
Sbjct: 153 NEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVF 212
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI GL R ++ +A + ++M ++ VT+N L++ C VG A ++R
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + P+ +T++ L+SG + + KE +L+ EM GF+PD TY+ DGL
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGL 326
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 34/278 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +YN+LI+G + AL F+D M+R + P +VT+N+LI G C+ K A
Sbjct: 524 PNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDF 583
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ G +P+V+++N+LI G+ + + + M LG + + T L+ G
Sbjct: 584 LTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK 643
Query: 308 EG-------------------RVL---------------KACELVIDFSRRGVLPKDFDY 333
EG RV+ KA L +G+ P Y
Sbjct: 644 EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTY 703
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ EG ++V+ + K P L++G L+ A +M++
Sbjct: 704 NSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVE 763
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
LP++ N L L GR + + + KG+
Sbjct: 764 NNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++L+S C++K A+ L+ MR G P++VS + L E++F + V++ E+
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + + + E + +RGV P F Y L+ LC E
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A ++ DE+ + S++ TLI+G ++ + A + E+M ++ + P+ +TFN LL
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC + + +A L G PDG TY IL G R + L + ++G
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 469 DLATYNSYMDGLSNARK 485
+ T + ++GL K
Sbjct: 350 NNYTGSILLNGLCKQGK 366
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN LI+G+ K LG Y+ M +KP V T++ LISG C + +L L
Sbjct: 594 PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKL 652
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM + P+ V +N +I + + ++ M++ G +T L+ G
Sbjct: 653 YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFR 712
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ +LV + + + PK Y LV+ C + A E+ + LP+
Sbjct: 713 EGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASI 772
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C L GL + + E + +M +GI+
Sbjct: 773 CNELTAGLEQEGRLQEVQVICSEMNVKGII 802
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 194/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+I+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ F K E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKI 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + +LP Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P++ T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + +I + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ C G + A + ++ G+ P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 8/188 (4%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEV 352
TC +++ L LK +LV F + P +F L+ C G +A V
Sbjct: 103 TCRKVIEHLMK----LKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSV 158
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
D + K G PSV++ TL+ G ++ E L M G+ PD T++ L+ LC
Sbjct: 159 FDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCK 218
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ DA+ L GL P+G+T+ L+ G+ + R + +ML + +PDL T
Sbjct: 219 ESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLIT 278
Query: 473 YNSYMDGL 480
YN+ + GL
Sbjct: 279 YNTLIYGL 286
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 197/434 (45%), Gaps = 13/434 (2%)
Query: 60 HLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAW-ASTIDSFRHDHTTFLFIVRS 118
+LL P I +S LH + +L H Q + +F W S+I +++H + ++
Sbjct: 28 NLLRPKICSILTASTLHQVLYQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHI 87
Query: 119 LASSYRFSELHSVL------NFISANPCPCSNDGIFSCPEM-ERIFHFAVNAFVKANRMN 171
L S+L +F+S + + P++ +F + V +
Sbjct: 88 LTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQ 147
Query: 172 DGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ + FE M +++G RP + VL+N K R D Y +M R V+ ++ +N+
Sbjct: 148 EAIQVFEHM--MVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNV 205
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI C++ + A L EM K P++ ++NTLI + + E +++ M G
Sbjct: 206 LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREG 265
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT L+ G C EGR+ +A L + R P Y L++ C + AL
Sbjct: 266 IKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTTLIDGYCRLNDLDQAL 323
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ +E+ +G P+V+ +++ L + + +A+ L+ +M ++ I PD+VT N L+
Sbjct: 324 RLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAY 383
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +G A +++ GL D TY L+ G+ + + L+ MLD GF P
Sbjct: 384 CKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSY 443
Query: 471 ATYNSYMDGLSNAR 484
TY+ +DG N +
Sbjct: 444 CTYSWLVDGYCNQQ 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 2/289 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + YN LI+GF K +A+ + + +RD P+ VT+ LI G+CR D AL
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLF-KEIRD-ATPNHVTYTTLIDGYCRLNDLDQALR 324
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM +G P VV++N+++R + + + EM E E +VTC L++ C
Sbjct: 325 LREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC 384
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + A ++ G+ F Y L+ C A E++ + G PS
Sbjct: 385 KIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYC 444
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ L++G + L ++ +++G+ D + L+ C + A ++ L
Sbjct: 445 TYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLM 504
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
KG D + Y L Y + + +L++EM + L Y +
Sbjct: 505 QEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRA 553
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 3/266 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K RM + + F+ +R D P+ Y LI+G+ + + D+AL + M
Sbjct: 273 YNSLIHGFCKEGRMREAMRLFKEIR---DATPNHVTYTTLIDGYCRLNDLDQALRLREEM 329
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VVT+N ++ C + A L EM EK P+ V+ NTLI +
Sbjct: 330 EAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDM 389
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M+E G + T + L+ G C + A EL++ G P Y L
Sbjct: 390 KSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWL 449
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ C + N L++ DE +KG LI + + A + M ++G
Sbjct: 450 VDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGT 509
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRL 422
L DSV + L +G+ A L
Sbjct: 510 LGDSVIYTSLAYAYWKLGKANAASDL 535
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 193/418 (46%), Gaps = 42/418 (10%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH ++ ++ L + FSE S++ + + S +F+ + I+
Sbjct: 8 TFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIY 67
Query: 158 HFA--VNAFVKANRMNDGL------------LAFEAMRKLID------------------ 185
F+ + A++++ + D + + F+ RK+++
Sbjct: 68 VFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDI 127
Query: 186 ---GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R
Sbjct: 128 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 187
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D L M G P+V +++ LI G E K D+ + EM+ G + VT L
Sbjct: 188 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 247
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+ KG
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P TTLI+G + A ++M++E I D V + L+ LC GR+VDA++
Sbjct: 308 KPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + GL PD TY ++++ + ++ +G L+ EM G P + TYN M+G
Sbjct: 368 MLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 142 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 201
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + PDL TYN+ + GL
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGL 286
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E +L+ G FN L+ C G A +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 162
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 163 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 221
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 187/397 (47%), Gaps = 22/397 (5%)
Query: 103 DSFRHDHTTFLFIVRSLA------------SSYRFSELHSVLNFISANPCPCSNDGIFSC 150
S+RH + TF I +L+ S +F EL S L + S +
Sbjct: 60 SSYRHKNRTFRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVS---LSKQ 116
Query: 151 PEMERIFH------FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
EM I H +N F + ++ G + KL P+V ++ LINGF
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKL-GLEPNVITFSTLINGFCIEG 175
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ +A+ +D MV KP+V +++I+I G CR K + L M+ GC P+VV +N
Sbjct: 176 KIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYN 235
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
T++ +R +E V++ +M G + VT L+ GL N GR +A L+ +
Sbjct: 236 TIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGG 295
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
++P + L++ +C EG A ++ + + G P V TL+ G + VEA
Sbjct: 296 NIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEA 355
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ E M+ +G +PD +F+ L+ C R +A +L + +GL PD ++Y+ L+SG
Sbjct: 356 RKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISG 415
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ R E E L +M G+ P+L TY+ +D LS
Sbjct: 416 LCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLS 452
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 7/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + + + + + E M K++ P V IYN +++ K R ++A+ + +M
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHM-KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM 257
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P VVT+ LI G ++ A GL EM+ P++V+F+ LI E +
Sbjct: 258 KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEV 317
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + M E+G E T L++G C V++A ++ +G +P F + L
Sbjct: 318 SEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V C A ++ DE+ +G +P ++ TLI GL + R+ +EA L + M G
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGY 437
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT++ LL+ L G A L GL PD +TY+I++ G + + K+
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARE 497
Query: 457 LVNEMLDEGFIPDLATYNSYMDG------LSNARKSVRQ 489
L E+ +G P+ +DG L A K+ RQ
Sbjct: 498 LFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 7/333 (2%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
+ C I++ V+ K +N+ + F M+ P+V Y LI+G +
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKG-TGILPTVVTYTSLIHGLRNLGRW 282
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+A G + M + PD+V F++LI C+ + A + + M E G P+V ++NTL
Sbjct: 283 KEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTL 342
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ G+ + E + MI G + ILV+G C R+ +A +L + + RG+
Sbjct: 343 MNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+P Y L+ LC A E+ ++ G P+++ + L++ L + +A G
Sbjct: 403 IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMG 462
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD VT+N +++ +C G+ DA L S KGL P+ + G
Sbjct: 463 LFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVC 522
Query: 447 RENRRKEGENLVNEMLD------EGFIPDLATY 473
+ E +M +G I ATY
Sbjct: 523 KGGLLDEAHKAFRQMEKDDCSPAQGCINGRATY 555
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 13/396 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
IF + F H++ T+ I+ LA S +F + +VL+ ++ C ++GIF
Sbjct: 77 LEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCK-FHEGIF---- 131
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ + HF+ K + + F+A+R ++ +PS+ + +N V+ + D F
Sbjct: 132 LNLMKHFS-----KLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKF 186
Query: 213 YDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN-PNVVSFNTLIRGF 270
+ ++P+ FNIL+ C+N D A + EM++ + PN+++++TLI G
Sbjct: 187 LLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGL 246
Query: 271 FGERKFDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
G + E + + EM+ ++T L++G C+ +V +A +++ + G P
Sbjct: 247 CGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPN 306
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F+Y L+ C EG A EV DE+ G P + TTLI R + EA L++
Sbjct: 307 VFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLK 366
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M + D+VTFN +L LC GR +A + +G+ + +Y I+++ RE
Sbjct: 367 DMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREG 426
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ LV ML G +P AT N + L A K
Sbjct: 427 ELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGK 462
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 1/296 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ V K ++ E M+K P++ Y+ LING +A+ ++
Sbjct: 202 IFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEE 261
Query: 216 MV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV +D++ PD +T+N LI+GFC +K D AL + M++ GCNPNV +++ L+ GF E
Sbjct: 262 MVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEG 321
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E + EM LG + +V L++ C GRV +A EL+ D +
Sbjct: 322 RLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFN 381
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC EG A +++ L +G + + ++ L R + +A+ L+ ML
Sbjct: 382 VILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGR 441
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
G+LP T N LL LC+ G+ DA L G P+ ++ +LV RE +
Sbjct: 442 GVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERK 497
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F +++ L E M+K +G P+V Y+ L+NGF K ++A +D
Sbjct: 275 YNALINGFCHGEKVDRALKIMEFMKK--NGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 332
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +KPD V + LI+ FCR + D A+ L ++MRE C + V+FN ++ G E +
Sbjct: 333 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGR 392
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F+E M + G + + I+++ LC EG + KA +LV RGVLP
Sbjct: 393 FEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNE 452
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L+ LC G G A+ + L + G P + L+E + R RK + A L++ ++
Sbjct: 453 LLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 178/408 (43%), Gaps = 40/408 (9%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPC-------------PCSNDGIFSCPEMERIF 157
T+ +VR L R ++ +VL+ +++ C C + G S +
Sbjct: 118 TYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEAL 177
Query: 158 H------------FAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKC 203
H +NA +++GL E +RKL + YN ++ G
Sbjct: 178 HAKGSTLDTGNCNLVINAICDQGCVDEGL---EMLRKLPLFGCEADIVSYNAVLKGLCAA 234
Query: 204 REFDKALGFYDRMVR----------DRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+ + D MV+ PD+ + +I G C+ ++A + M
Sbjct: 235 KRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS 294
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G PNVV +NT+++G ++++ + EM + C VT ILVD C G V +
Sbjct: 295 YGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDR 354
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
EL+ G +P Y ++ C EG A+ ++ + G P+ I+ T +++
Sbjct: 355 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLK 414
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + V+A LM +M+++G LP+ VTFN ++ LC G A L G +P
Sbjct: 415 GLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNP 474
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
D ++Y ++ G + + +E L+N M+++G P++ TY+S L+
Sbjct: 475 DLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALA 522
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 152/296 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN ++ G ++KA M + D VTFNIL+ FC+N D +
Sbjct: 298 KPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIE 357
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E GC P+V+++ T+I GF E DE V + M GC+ ++++ I++ GLC
Sbjct: 358 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLC 417
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ R + A EL+ ++G LP + ++ LC +G A+E++ ++ G P +I
Sbjct: 418 STERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLI 477
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +T+I+GL + K EA L+ M+ +GI P+ +T++ + L GR ++
Sbjct: 478 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNI 537
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ D + Y+ ++S + + + M+ G +P+ +TY + + GL++
Sbjct: 538 QDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLAS 593
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 4/301 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +Y +I+G K + A RM +KP+VV +N ++ G C +++ A L
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +K C + V+FN L+ F D + + +M+E GC +T +++G C
Sbjct: 324 LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 383
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + +A L+ + G P Y +++ LC A E++ + ++G LP+ +
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443
Query: 368 CTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
T+I L +KG+ +A L+++ML G PD ++++ +++ L G+T +A L +
Sbjct: 444 FNTIINFL--CKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ P+ +TY + RE R + + + + D D YN+ + L R+
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRE 561
Query: 486 S 486
+
Sbjct: 562 T 562
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 5/276 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREF 206
+CP + F+ V+ F + N + D ++ E + ++++ P V Y +INGF K
Sbjct: 331 NCPLDDVTFNILVDFFCQ-NGLVDRVI--ELLEQMLEHGCMPDVITYTTVINGFCKEGLI 387
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D+A+ M KP+ +++ I++ G C +++ A L M ++GC PN V+FNT+
Sbjct: 388 DEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTI 447
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + ++ + + +M+ GC ++ ++DGL G+ +A EL+ +G+
Sbjct: 448 INFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 507
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y + L EG +++ D + + +I L + R+ A
Sbjct: 508 TPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAID 567
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+ M+ G +P+ T+ L++ L G +A L
Sbjct: 568 FLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDL 603
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 139/329 (42%), Gaps = 17/329 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + A R D + A +A V YN ++ G+ + + + A +
Sbjct: 59 IRSLCVAGRTADAVRALDAA----GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---P 111
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+ T+ ++ G C + AL + EM + C P ++ +I + +
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ + G + C ++++ +C++G V + E++ G Y +++ L
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231
Query: 341 CGEGNAGIALEVVDELWK----------KGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
C G E++DE+ K G P + T+I+G+ + A+ ++ +
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M G+ P+ V +N +L+ +C R A+ L K D +T++ILV + +
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L+ +ML+ G +PD+ TY + ++G
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVING 380
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F K +++ ++ + M +P+ Y +++ G + A RM
Sbjct: 374 YTTVINGFCKEGLIDEAVMLLKNMPS-CGCKPNTISYTIVLKGLCSTERWVDAEELMSRM 432
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ VTFN +I+ C+ + A+ L ++M GCNP+++S++T+I G K
Sbjct: 433 IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + MI G + +T + L EGR+ K ++ + + Y +
Sbjct: 493 EEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAV 552
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ LC +A++ + + G +P+ T LI+GL EA L+ ++
Sbjct: 553 ISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +N K + + + M L++G P + Y+ +I+G K + ++AL +
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQM--LVNGCNPDLISYSTVIDGLGKAGKTEEALELLNV 501
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + P+V+T++ + R + D + +F +++ + V +N +I R+
Sbjct: 502 MINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRE 561
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYF 334
D ++ M+ GC + T L+ GL +EG + +A +L+ + SRR V F
Sbjct: 562 TDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLTRRF 621
Query: 335 GLV 337
G+V
Sbjct: 622 GIV 624
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 13/190 (6%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+V G C G+V A L V P + YF +V LCG G AL V+DE+ +
Sbjct: 90 MVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRS 146
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+P +IE R A ++E + +G D+ N ++ +CD G +
Sbjct: 147 CVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGL 206
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML----------DEGFIPDL 470
+ G + D ++Y+ ++ G R + E L++EM+ G PD+
Sbjct: 207 EMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDI 266
Query: 471 ATYNSYMDGL 480
Y + +DG+
Sbjct: 267 RMYATIIDGI 276
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 179/386 (46%), Gaps = 9/386 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E S++ I + S +F+ +
Sbjct: 5 TNSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D L F R+ P + VL + +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVL-DHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ + LA +F + + G P+VVSFNTL+ G+
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ +A EL + +G++P
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ +G P +I TLI G + + L+++M
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D + Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMD 478
+ E ++ EML G PD TY M+
Sbjct: 364 DAEKMLREMLSVGLKPDSGTYTIVMN 389
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 3/278 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + L F+A+ K +PSV +N L+NG++K
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKW-GLKPSVVSFNTLMNGYIKMG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
D+ + M +PDV T+++LI+G C+ K D A LF EM EKG PN V+F
Sbjct: 186 ILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G K D + + +++ G +T L+ G C +G + + +L+ + S +
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ A E ++ ++ + T LI GL + + V+A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDA 365
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
++ +ML G+ PDS T+ ++ + C G +L
Sbjct: 366 EKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKL 403
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N K ++M++ F+ M + L+ P+ + LI+G K + D A+ Y
Sbjct: 209 YSVLINGLCKESKMDEAHELFDEMLEKGLV---PNGVTFTTLIDGHCKNGKLDLAMEIYK 265
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+++ + PD++T+N LI GFC+ L EM KG P+ +++ TLI G E
Sbjct: 266 QILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +MIE V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 326 DLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYT 385
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C G+ +++ E+ + G++PSV+
Sbjct: 386 IVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + AL FR RE + V F+T ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDALECFRLSRE---HKFWVPFDTCRKVLDHLMKLKYFKL 119
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLV 337
E++E G S IL+ C EG + + +LV D ++ G+ P + L+
Sbjct: 120 VWGFYKEILECGYPASLYFFNILMHRFCKEGEI-RLAQLVFDAITKWGLKPSVVSFNTLM 178
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
G + + + G P V + LI GL + K EA L ++ML++G++
Sbjct: 179 NGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLV 238
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF L++ C G+ A + ++GL PD +TY+ L+ G+ ++ K+ +L
Sbjct: 239 PNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDL 298
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
++EM +G PD TY + +DG
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDG 320
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C +++ L +L+ G +++L+ G FN L+ C G A +
Sbjct: 103 TCRKVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAI 162
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++++ L++GY + EG L N M G PD+ TY+ ++GL K
Sbjct: 163 TKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESK 221
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 148/267 (55%), Gaps = 5/267 (1%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ D+ +FNILI FC K AL F ++ + G +P +V+FNTL+ G E + E
Sbjct: 10 QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+++ ++M C+ + VT L++GLC EGRV++A L+ G+ P Y +V+
Sbjct: 70 LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 340 LCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+C G+ AL ++ ++ + ++ P V+ + +I+GL + + +A L +M +GI P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT++C++ C G+ +A RL + + PD +T+ L++ +E ++L+
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
EM+ G P++ T N+ +DGL ++ K
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGK 272
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 172/339 (50%), Gaps = 17/339 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ +R+++ L F M K P+V + L+NG + +A+ DRM
Sbjct: 53 FNTLLHGLCVEDRVSEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRM 107
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERK 275
V D ++P+ +T+ ++ G C+ AL L R+M E P+VV ++ +I G + + +
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ N+ EM + G VT +++G C+ G+ +A L+ + R + P + G
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKML 392
L+ L EG+ A +++ E+ G P+V+ C TL++GL +L+ +E M+K +
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287
Query: 393 KE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY +++G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++R E + + M + F P++ T+N+ + G A
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA 386
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 154/346 (44%), Gaps = 51/346 (14%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+LI F C + AL + ++ + P +VTFN L+ G C + AL LF +M
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC------ 306
C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 77 ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 307 ------------------------------NEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+GR A L I+ +G+ P Y +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A ++ E+ + P V+ + LI L + A L+++M+ G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLAST----------KGLDPDGMTYHILVSGY 445
P+ VT N LL+ LCD G+ DA + + + + G++PD TY+IL+SG
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E + E E L EM G +PD TY+S ++GL + T+
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 169 RMNDGLLAFEAMRKLID---GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+M D + A +RK+ + +P V IY+ +I+G K A + M + PD+
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT++ +I+GFC + K+ A L +EM + +P+VV+F+ LI E + ++ E
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELV---------IDFSR--RGVLPKDFDYF 334
MI G + VTC L+DGLC+ G++ A E+ ID + GV P Y
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A E+ +E+ +G +P + +++I GL + + EA+ + + M +
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
P+ VTFN L+ C G D L +G+ + +TY L+ G+ +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
++ EM+ G PD T + + GL
Sbjct: 428 LDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 26/297 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SS ++SE +L + P++ F +NA VK
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS---------PDV-VTFSGLINALVKE 235
Query: 168 NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR------- 218
+N A + ++++I P+V N L++G + AL + M +
Sbjct: 236 GDLNS---AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA 292
Query: 219 ----DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ V+PDV T+NILISG KF A L+ EM +G P+ V+++++I G +
Sbjct: 293 THAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQS 352
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M + VT L+ G C G V EL + RRG++ Y
Sbjct: 353 RLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI 412
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
L+ GN +L++ E+ G P I ++ GL + +A ++E++
Sbjct: 413 TLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS----IYNVLINGFVKCREFDKALGF 212
F+ + + KA ++DGL F M GR + Y LI GF K + +L
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEM-----GRRGIVANAITYITLIRGFRKVGNINGSLDI 430
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ M+ V PD +T +++G ++ AL + E++
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 150/326 (46%), Gaps = 3/326 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V+ K ++ D + E + +G P+++ YN L+NG K ++A+ ++V +
Sbjct: 172 VDWLAKNKKIQDAVALMEKITA--NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 229
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PDVVT+ LI G + K+ A LF+EM +G + V + LIRG K +
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ M GC VT ++DGLC GR+ A + RG+ P + Y L+
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC ALE++ ++ K P I LI+GL + A ++ML+ G PD
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L+ C G T A + S+ P+ +TY L+SG + + +
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQ 469
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
M + G PD Y+S +DGL + K
Sbjct: 470 HMKERGCPPDSFVYSSLVDGLCKSGK 495
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 145/301 (48%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ Y +++ K ++ A+ +++ + P + T+N L++G C+ + + A+ L R
Sbjct: 165 IHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 224
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
++ + GC P+VV++ +LI G E++ E + EM G +V L+ GL G
Sbjct: 225 KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++ +A + + +G +P +++ LC G G A+ + + +G P+ + +
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI GL + RK A ++ +M K PD++T+N L++ LC G A
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
G PD TY+ILVSG+ + + ++M P++ TY + + GL R+ +
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKA 464
Query: 490 T 490
+
Sbjct: 465 S 465
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 158/335 (47%), Gaps = 5/335 (1%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P++E ++ + + A + M + PS+ +N++++G K + A+
Sbjct: 92 PDVE-TWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAM 150
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
++ + D+ T+ ++ +NKK A+ L ++ GC P + ++N L+ G
Sbjct: 151 DHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ +E +++ ++++ GC VT L+DGL E R +A +L + + RG++
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ L G A V + +G +P V+ +T+I+GL + + A + +
Sbjct: 271 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG--LDPDGMTYHILVSGYTRE 448
M G+ P+ V ++ L+ LC R +D L +LA K PD +TY+IL+ G +
Sbjct: 331 MEARGLAPNEVVYSALIHGLCK-ARKMDC-ALEMLAQMKKAFCTPDTITYNILIDGLCKS 388
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +EML+ G PD+ TYN + G A
Sbjct: 389 GDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKA 423
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E ++ ++ KA +M+ L M+K P YN+LI+G K + + A F+
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAF-CTPDTITYNILIDGLCKSGDVEAARAFF 398
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ KPDV T+NIL+SGFC+ D A G+F +M C+PNVV++ TLI G
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+ + M E GC S LVDGLC G++ C L + R GV
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TR 517
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
L+ LC A+ + + + K+G +P A ++I L + K
Sbjct: 518 TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAK 563
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 150/334 (44%), Gaps = 6/334 (1%)
Query: 158 HFAVNAFVKANR-MNDGLLAFEAMRKLIDGR----PSVSIYNVLINGFVKCREFDKALGF 212
+ +A VK + + D LA+E + L R SV N L++ F + + +A
Sbjct: 22 EISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNL 81
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFF 271
+ PDV T+N+LI+G+C ++ + A + REM E G P++ + N ++ G
Sbjct: 82 LKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLC 141
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
K ++ GC T +VD L ++ A L+ + G P
Sbjct: 142 KSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA 201
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ LC G A++++ ++ G P V+ T+LI+GL + ++ EA L ++M
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
G++ D+V + L+ L G+ A + +++G PD +T ++ G + R
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M G P+ Y++ + GL ARK
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 136/305 (44%), Gaps = 17/305 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D + ++R L + + + SV +++ C P++ + ++ KA
Sbjct: 269 DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV---------PDVVTLSTM-IDGLCKA 318
Query: 168 NRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
R+ + F++M R L P+ +Y+ LI+G K R+ D AL +M + PD
Sbjct: 319 GRIGAAVRIFKSMEARGLA---PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 375
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
+T+NILI G C++ + A F EM E GC P+V ++N L+ GF D + +
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDD 435
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M C + VT L+ GLC ++ KA RG P F Y LV+ LC G
Sbjct: 436 MSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+ DE+ + G S T LI L + + EA L + KEG +P +N
Sbjct: 496 LEGGCMLFDEMERSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS 553
Query: 406 LLEDL 410
++ L
Sbjct: 554 IISTL 558
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 349 ALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A V+ E+ + G PS+ ++ GL + K + A E G D T+ ++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ L + DA L + G P TY+ L++G + R +E +L+ +++D G
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
Query: 468 PDLATYNSYMDGLSNARKS 486
PD+ TY S +DGL ++S
Sbjct: 233 PDVVTYTSLIDGLGKEKRS 251
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 6/298 (2%)
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNILIS 233
A E +R++ RP+ YN +I GF AL R +R+R + PD T+ LIS
Sbjct: 135 ALELLRQM--PRPNAVTYNTVIAGFCARGRVQAALEVM-REMRERGGIAPDKYTYATLIS 191
Query: 234 GFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G+C+ + + A +F EM +G P+ V +N LI G+ K D + +M++ G
Sbjct: 192 GWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVA 251
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T +LV L +GR A ++ + R G+ P F Y L+ C EGN ALEV
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+E+ +KG + + T+LI R + E L + +K+GI PD V +N L+ C
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCA 371
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
G A + K + PD +TY+ L+ G+ R E L++EM G PDL
Sbjct: 372 GGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL 429
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 8/286 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + K RM D F+ M + PS +YN LI G+ + D AL + + MV+
Sbjct: 190 ISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRG 249
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V V T+N+L+ + + A + EM+ G +P+V ++N LI G+ E + +
Sbjct: 250 VAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKAL 309
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G ++VT L+ +G+V + L ++G+ P Y L+
Sbjct: 310 EVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSH 369
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ A E++ E+ KK P + TLI G L + EA GL+++M K GI PD
Sbjct: 370 CAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL 429
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
LC G+ DA+ L KG+ PD TY L+ G T
Sbjct: 430 --------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLT 467
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V+A R +D E M++ +G P V YN+LING+ K KAL ++
Sbjct: 257 YNLLVHALFMDGRASDAYAVLEEMQR--NGLSPDVFTYNILINGYCKEGNEKKALEVFEE 314
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R V+ VT+ LI F R + LF+ +KG P+VV +N LI
Sbjct: 315 MSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGD 374
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM + VT L+ G C GR+ +A L+ + ++RG+ P G
Sbjct: 375 MERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD----LG 430
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
L C G A ++ E+ KG P +LIEGL + + + A+
Sbjct: 431 L----CKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSAA 476
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 148/267 (55%), Gaps = 5/267 (1%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ D+ +FNILI FC K AL F ++ + G +P +V+FNTL+ G E + E
Sbjct: 10 QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+++ ++M C+ + VT L++GLC EGRV++A L+ G+ P Y +V+
Sbjct: 70 LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 340 LCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+C G+ AL ++ ++ + ++ P V+ + +I+GL + + +A L +M +GI P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT++C++ C G+ +A RL + + PD +T+ L++ +E ++L+
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
EM+ G P++ T N+ +DGL ++ K
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGK 272
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 172/339 (50%), Gaps = 17/339 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ +R+++ L F M K P+V + L+NG + +A+ DRM
Sbjct: 53 FNTLLHGLCVEDRVSEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRM 107
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERK 275
V D ++P+ +T+ ++ G C+ AL L R+M E P+VV ++ +I G + + +
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ N+ EM + G VT +++G C+ G+ +A L+ + R + P + G
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKML 392
L+ L EG+ A +++ E+ G P+V+ C TL++GL +L+ +E M+K +
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287
Query: 393 KE--------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ G+ PD T+N L+ L + G+ ++A+ L +G+ PD +TY +++G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++R E + + M + F P++ T+N+ + G A
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA 386
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 154/346 (44%), Gaps = 51/346 (14%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+LI F C + AL + ++ + P +VTFN L+ G C + AL LF +M
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC------ 306
C PNVV+F TL+ G E + E V + M+E G + + +T +VDG+C
Sbjct: 77 ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 307 ------------------------------NEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+GR A L I+ +G+ P Y +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A ++ E+ + P V+ + LI L + A L+++M+ G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLAST----------KGLDPDGMTYHILVSGY 445
P+ VT N LL+ LCD G+ DA + + + + G++PD TY+IL+SG
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E + E E L EM G +PD TY+S ++GL + T+
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 157/326 (48%), Gaps = 14/326 (4%)
Query: 169 RMNDGLLAFEAMRKLID---GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+M D + A +RK+ + +P V IY+ +I+G K A + M + PD+
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT++ +I+GFC + K+ A L +EM + +P+VV+F+ LI E + ++ E
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELV---------IDFSR--RGVLPKDFDYF 334
MI G + VTC L+DGLC+ G++ A E+ ID + GV P Y
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A E+ +E+ +G +P + +++I GL + + EA+ + + M +
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
P+ VTFN L+ C G D L +G+ + +TY L+ G+ +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
++ EM+ G PD T + + GL
Sbjct: 428 LDIFQEMISSGVYPDTITIRNMLTGL 453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 26/297 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SS ++SE +L + P++ F +NA VK
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKIS---------PDV-VTFSGLINALVKE 235
Query: 168 NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR------- 218
+N A + ++++I P+V N L++G + AL + M +
Sbjct: 236 GDLNS---AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDA 292
Query: 219 ----DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ V+PDV T+NILISG KF A L+ EM +G P+ V+++++I G +
Sbjct: 293 THAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQS 352
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M + VT L+ G C G V EL + RRG++ Y
Sbjct: 353 RLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYI 412
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
L+ GN +L++ E+ G P I ++ GL + A ++E++
Sbjct: 413 TLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + + KA ++DGL F M R ++ + Y LI GF K + +L +
Sbjct: 376 FNTLITGYCKAGMVDDGLELFCEMGRRGIV---ANAITYITLIRGFRKVGNINGSLDIFQ 432
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M+ V PD +T +++G ++ AL + E++
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K A +D + + ++P VV++N L+SG+ R D
Sbjct: 120 GYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEG 179
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K DE + EM+ G VT L+DG
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDG 239
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + +LP Y L+ LC +GB A ++ E+ KG P
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPD 299
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 300 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 359
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ G PD TY ++++ + ++ G L+ EM +G +P + TYN M+G
Sbjct: 360 EMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K +M++ F+ M L+ G P + LI+G K D A+ Y +
Sbjct: 198 YSVLINGLCKEXKMDEANELFDEM--LVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQ 255
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 256 MLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGD 315
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G P Y
Sbjct: 316 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTM 375
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ +++ E+ + G++PSV+ L+ G
Sbjct: 376 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C EGN +A V D + K G PSV++ TL+ G RL E
Sbjct: 122 PASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFR 181
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC + +A+ L GL P G+T+ L+ G+
Sbjct: 182 LKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHC 241
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + +PDL TYN+ + GL
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 275
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 52 RSDIXVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 108
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C EG + A + ++ G+ P Y L+
Sbjct: 109 VWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMS 168
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K EA+ L ++ML G++P
Sbjct: 169 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVP 228
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ L+
Sbjct: 229 XGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLI 288
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
EM +G PD TY + +DG
Sbjct: 289 XEMSLKGXKPDKITYTTLIDG 309
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G +++L+ G FN L+ C G A +
Sbjct: 92 TCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAI 151
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L+SGY R EG L + M G PD+ TY+ ++GL K
Sbjct: 152 TKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXK 210
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 179/400 (44%), Gaps = 20/400 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-------DGIFSCPEMERIFHF- 159
D T+ +V + + R + + +S+ C + G++ ME F
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357
Query: 160 -----------AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+ + R+++ FE + K P+V Y +I+G +K +
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKL-KTAGCSPNVVAYTAVIDGLLKAGRIED 416
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
L ++ M P T+ ++I G C+ + A +F +M +KGC P+ +++ TLI
Sbjct: 417 GLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 476
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
GF K DE + M+ G E ++VT +V G C + +A E++ RG P
Sbjct: 477 GFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 536
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
F + L+ +G A A +V+ E+ +G P VI T+LI+ L + EA +
Sbjct: 537 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 596
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+ M+++G PD++T+ ++++ +G A + L + G+ PD Y+ L+ GY +
Sbjct: 597 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 656
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
R + + + M+ G P+ T+N M GL K+ R
Sbjct: 657 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 164/330 (49%), Gaps = 6/330 (1%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ +N KA +++ + F M + P++ YN +I+G + D+A F++ M+
Sbjct: 24 NIVLNGLCKARKIDKAIELFLEMPSM-GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMI 82
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ +PDV+ F LI GFC+ + + L + ++ P+V + ++I G+ D
Sbjct: 83 DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLD 141
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
G + EM+ GC + +L+D LC GRV +A EL + G L + L+
Sbjct: 142 TGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLI 201
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
E L G A E+ E+ ++G P + +LI L + K EA+ + + ++ + +
Sbjct: 202 EALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVA 261
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKEGE 455
V +N L++ C +GR VD D L+LL D PD TY+ILV+G++R NR +
Sbjct: 262 TSRVAYNSLMDGYCKLGR-VD-DGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDAL 319
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L + G P+ ATY + + GL +A++
Sbjct: 320 ELFKLLSSYGCKPNAATYTTIIQGLYDAQR 349
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 36/315 (11%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
++AL M + PDVV NI+++G C+ +K D A+ LF EM GC P +VS+NT
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I G K DE MI+ GCE + L+ G C G+ + ++++ + +
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQP-QVGHMLLNQALKR 119
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P F Y ++ C G+ ++++E+ G +P A LI+ L +L + EA
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDL----------------------------------- 410
L E+M K G L D VTF L+E L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G+ +A+ + K + + Y+ L+ GY + R +G L+ +M++ PD+
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299
Query: 471 ATYNSYMDGLSNARK 485
TYN + G S A +
Sbjct: 300 QTYNILVAGFSRANR 314
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 171/436 (39%), Gaps = 78/436 (17%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG- 173
++ LAS + E + N + N C P++ F ++ F KA + G
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCE---------PDV-IAFTTLIHGFCKAGQPQVGH 110
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+L +A+++ RP V +Y +I+G+ K + D + M+ PD + +LI
Sbjct: 111 MLLNQALKRF---RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLID 167
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE- 292
C+ + D A LF MR+ GC + V+F TLI K DE + EMIE G E
Sbjct: 168 PLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
Query: 293 ----------------------------------FSSVTCEILVDGLCNEGRV------- 311
S V L+DG C GRV
Sbjct: 228 YLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL 287
Query: 312 --LKACE----------LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ C+ LV FSR L + F L+ + NA ++ L+
Sbjct: 288 LQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA 347
Query: 360 GNLPS----------VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ VI+ TT+I+GL ++ EA L EK+ G P+ V + +++
Sbjct: 348 QRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDG 407
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
L GR D + S P TY +++ G + + + +M+ +G +PD
Sbjct: 408 LLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 467
Query: 470 LATYNSYMDGLSNARK 485
TY + +DG S A K
Sbjct: 468 TITYTTLIDGFSKASK 483
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 16/316 (5%)
Query: 113 LFIVRSLASSY----RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
LFI SL S Y R E + VL ++A C P++ ++ ++
Sbjct: 538 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA---------PDV-ILYTSLIDLLFSTG 587
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R+ + F++M + P Y +I F K + A + M + V PD +
Sbjct: 588 RVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 646
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L+ G+ + ++ D A G++ M G PN V+FN L+ G F + K D ++ EM+E
Sbjct: 647 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 706
Query: 289 LG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ V+ IL+DGL GRV +A + RG++P+ Y L+ L G
Sbjct: 707 KDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIP 766
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A ++V+++ K G P V A + LI GL A + ++M+K G P+ VT+ L
Sbjct: 767 EAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLR 826
Query: 408 EDLCDVGRTVDADRLR 423
GR +D + ++
Sbjct: 827 RGFRAAGRALDLEAVK 842
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 161/410 (39%), Gaps = 72/410 (17%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
SC + ++ KA + D FE M + P Y LI+GF K + D+
Sbjct: 428 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDE 486
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A D M+ +P VT+ ++ GFC+ + A + +MRE+GC P + F +L+
Sbjct: 487 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 546
Query: 269 GFFGERKFDEGVNMAYEM-----------------------------------IELGCEF 293
+ + + +E + EM IE GC
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 606
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY----------------FGLV 337
++T ++ G V A E++ ++ GV P F Y FG+
Sbjct: 607 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 666
Query: 338 EKLCG-------------------EGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRR 377
+++ +G A + E+ +K +P ++++ T LI+GL +
Sbjct: 667 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGK 726
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA ++M+ GI+P+ T+ L+ L GR +A +L G++PD
Sbjct: 727 AGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQA 786
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
Y L++G + ++ EM+ G P+ TY G A +++
Sbjct: 787 YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRAL 836
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 194/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ ++
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQIS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K ++ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 135/280 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YNVLI+G + A MVR P VVTFNILI+ CR A+ +
Sbjct: 152 PDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDV 211
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + GC PN +S+N L+ GF E+K + + +M GC VT L+ LC
Sbjct: 212 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCK 271
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G+V A EL+ S +G P Y +++ L G A +++DE+ KG P +I
Sbjct: 272 DGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIIT 331
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++L+ GL R K EA + G+ P+++T+N ++ LC +T A
Sbjct: 332 YSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMV 391
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+G P +Y IL+ G E KE L+NE+ G +
Sbjct: 392 QRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVV 431
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 164/321 (51%), Gaps = 1/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ V+ + +G E+M D P + LI GF K + KA + +
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGD-IPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSG 149
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDV+T+N+LISG C ++ A L +M +GC+P+VV+FN LI + +
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAI 209
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M + GC +S++ L+ G C E ++ +A E + + RG P Y L+ L
Sbjct: 210 DVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +G A+E++++L KG P +I T+I+GL ++ K +A+ L+++M +G+ PD
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T++ L+ L G+ +A + G+ P+ +TY+ ++ G + + + +
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389
Query: 461 MLDEGFIPDLATYNSYMDGLS 481
M+ G P A+Y ++GL+
Sbjct: 390 MVQRGCKPTEASYTILIEGLA 410
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 145/292 (49%)
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
++ V+ E ++ F + MV PD++ LI GFC+ K A + + + G
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
P+V+++N LI G ++ + + +M+ GC S VT IL++ LC +G + +A +
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
++ + G P Y L+ C E A+E + ++ +G P ++ TL+ L
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ K A L+ ++ +G P +T+N +++ L VG+T A +L KGL PD +
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
TY LV G +RE + E +++ G P+ TYN+ M GL ARK+ R
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N + + + E M K P+ YN L++GF K ++ ++A+ + +M
Sbjct: 192 FNILINFLCRKGLLGRAIDVLEKMPKH-GCTPNSLSYNPLLHGFCKEKKMERAIEYLGKM 250
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
PD+VT+N L++ C++ K D A+ L ++ KGC+P ++++NT+I G K
Sbjct: 251 TSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 310
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM G + +T LV GL EG+V +A + D GV P Y +
Sbjct: 311 DQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAI 370
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + + ++G P+ + T LIEGL EA L+ ++ G+
Sbjct: 371 MLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430
Query: 397 LPDS 400
+ S
Sbjct: 431 VKKS 434
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 220/467 (47%), Gaps = 22/467 (4%)
Query: 35 PPVT--LPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYD 92
PP + L ++T T+ TH FL+T L P QIT L L S T
Sbjct: 6 PPESQLLKTLTSILTSEKTH---FLET--LNPYIPQITQPLLTSLLSSPSLAKKPETLVS 60
Query: 93 FHIFAWASTIDSFRHDHTT-FLFIVRSLASSYRFSELHSVL-NFISANPCPCS--NDGI- 147
F +A S ++F D + +VRSL S ++F++ S+L ++I + S N +
Sbjct: 61 FFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLH 120
Query: 148 ----FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK- 202
S P + +F A++A++ + + L F+ M +L +P++ N L+ G V+
Sbjct: 121 PNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRL-KLKPNLLTCNTLLIGLVRY 179
Query: 203 --CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPN 259
A +D MV+ V +V TFN+L++G+C K + ALG+ M E NP+
Sbjct: 180 PSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPD 239
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V++NT+++ + + + + +M + G + VT LV G C G + +A ++V
Sbjct: 240 NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ VLP Y L+ LC G+ LE++D + P V+ TLI+G L
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDADRLRLLASTKGLDPDGMTY 438
+EA LME+M +G+ + VT N L+ LC + R +++ L G PD +TY
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
H L+ Y + ++ EM +G + T N+ +D L RK
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N A M +GL +AM+ L +P V YN LI+G + +A ++M
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERK 275
D VK + VT NI + C+ +K + +E+ + G +P++V+++TLI+ +
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ M EM + G + +++T ++D LC E ++ +A L+ +RG + + Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ E ALE+ DE+ K P+V +LI GL K A +++ + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+LPD TFN ++ C GR A + PD T +IL++G +E ++
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
N N +++E + D TYN+ + +K
Sbjct: 612 NFFNTLIEEREV-DTVTYNTMISAFCKDKK 640
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 180 MRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
+++L+D P + Y+ LI ++K + AL M + +K + +T N ++ C
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ +K D A L ++G + V++ TLI GFF E K ++ + M EM ++ +
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+ GLC+ G+ A E + + G+LP D + ++ C EG A E +E
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K P C L+ GL + G+ EK L FN L+E+ R
Sbjct: 583 IKHSFKPDNYTCNILLNGLCK-------EGMTEKALN--------FFNTLIEE-----RE 622
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
VD +TY+ ++S + ++ + KE +L++EM ++G PD TYNS+
Sbjct: 623 VDT----------------VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 477 MDGL 480
+ L
Sbjct: 667 ISLL 670
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF---GERKFDEG 279
P F+I +S + K +AL +F++M PN+++ NTL+ G
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVE 338
+ +M+++G + T +LV+G C EG++ A ++ S V P + Y +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ +G E++ ++ K G +P+ + L+ G +L EA ++E M + +LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N L+ LC+ G + L + L PD +TY+ L+ G E L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+M ++G + T+N + L K TR
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 148/326 (45%), Gaps = 34/326 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IY LI G K +A + ++ RV DV T+++LI G RN K A G+
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 613
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F E++EKG PN ++N+LI G + D+ + EM G VT IL+DGLC
Sbjct: 614 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 673
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP---- 363
G + +A L D RG+ P Y +V+ C N A ++++E+ +G P
Sbjct: 674 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 733
Query: 364 ------------------------------SVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
S ++ TLIEG + K EA+ L+E+M++
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ +P+ VT+ L++ C G +A RL L + + P TY L+ GY E
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
L EM+ +G PD TY +D
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDA 879
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
VL+ K R D+A+ MV + PD+ T++ILI+GFC K+ A + EM +
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 305
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G P +++N LI GF + ++ + EM+ G E + + L++G+C G++ KA
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
E++ + +GV P Y L+E C N A E++DE+ K+ P+V+ + +I G
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L R + ++ +M+ G+ P++V + L+ GR ++ + +G+ PD
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
Y+ L+ G+ + R +E + EML+ P+ TY +++DG S A
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 534
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE + ++ + P+V Y+V+ING +C MV + +KP+ V + L++
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+ + + + + MRE+G P+V +N+LI GF ++ +E EM+E
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
++ T +DG G + A + GVLP Y L+E C EGN A V
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + L V + LI GL R K EA G+ ++ ++G+LP++ T+N L+ C
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A +L KG++PD +TY+IL+ G + + +NL +++ G P+ TY
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699
Query: 474 NSYMDGLSNAR 484
+ +DG ++
Sbjct: 700 AAMVDGYCKSK 710
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E R ++D P + Y++LINGF + +A M+ +KP+ +T+N LI
Sbjct: 260 AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID 319
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GF R + A + EM G N++ +NTL+ G K ++ + + EM+E G E
Sbjct: 320 GFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP 379
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S T +L++G C + +A EL+ + +R + P Y ++ LC GN ++
Sbjct: 380 DSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAIL 439
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ G P+ + TTL+ + + E+ ++E+M ++GILPD +N L+ C
Sbjct: 440 REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKA 499
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R +A + + L P+ TY + GY++ + + NEML G +P++ Y
Sbjct: 500 KRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIY 559
Query: 474 NSYMDG 479
+ ++G
Sbjct: 560 TALIEG 565
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 6/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F KA RM + M R+L RP+ Y I+G+ K E + A +++
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRL---RPNAHTYGAFIDGYSKAGEMEIADRYFN 545
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ V P+V + LI G C+ A +FR + + +V +++ LI G
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 605
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E + E+ E G ++ T L+ G C +G V KA +L+ + +G+ P Y
Sbjct: 606 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 665
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A + D++ +G P+ + +++G + + A L+E+ML
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLR 725
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD+ +N +L C + A L KG ++++ L+ GY + + +E
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEA 784
Query: 455 ENLVNEMLDEGFIPDLATYNSYMD 478
+L+ EM+++ FIP+ TY S +D
Sbjct: 785 NHLLEEMIEKQFIPNHVTYTSLID 808
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 149/305 (48%), Gaps = 7/305 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN+LI+G K E ++A +D + + P+ VT+ ++ G+C++K A L
Sbjct: 659 PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQL 718
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G P+ +N ++ E KF++ +++ EM+E G S+V+ L++G C
Sbjct: 719 LEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCK 777
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A L+ + + +P Y L++ C G G A + E+ ++ +P+
Sbjct: 778 SGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 837
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L+ G + E S L E+M+ +GI PD +T+ +++ C G ++A +L+
Sbjct: 838 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEIL 897
Query: 428 TKGLDPD-----GM-TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
KG+ G+ T ++ G+ E ++ M+ G++ + + +DG
Sbjct: 898 VKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQ 957
Query: 482 NARKS 486
N S
Sbjct: 958 NGANS 962
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 17/316 (5%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR--------- 237
RPS+ N L+ +K + + +D M +V PDV T+ +IS C+
Sbjct: 186 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 245
Query: 238 --------NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+ D A+ L R M +KG P++ +++ LI GF E++ E M EMI++
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV 305
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + +T L+DG +G + +A + + G+ + L+ +C G A
Sbjct: 306 GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKA 365
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
LE++ E+ +KG P + LIEG R + A L+++M K + P +T++ ++
Sbjct: 366 LEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G + + GL P+ + Y L++ + +E R +E ++ M ++G +PD
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485
Query: 470 LATYNSYMDGLSNARK 485
+ YNS + G A++
Sbjct: 486 VFCYNSLIIGFCKAKR 501
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 51/286 (17%)
Query: 184 IDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
I+GR P+ Y +++G+ K + A + M+ V PD +N++++ C+ +K
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 746
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
F+ AL LF+EM EKG + VSFNTLI G+ K E ++ EMIE + VT
Sbjct: 747 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805
Query: 301 LVDGLCNEGRVLKACELVIDFSRR-----------------------------------G 325
L+D C G + +A L ++ R G
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG---------NLPSVIACTTLIEGLR 376
+ P Y+ +++ C EGN A ++ DE+ KG LP+ C+ + G +
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPT---CSVIARGFQ 922
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
EA+ ++ M+K G + ++ + L++ + + D+D L
Sbjct: 923 IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNL 968
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ +N K + L F+ M L G S +N LI G+ K + +A +
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEM--LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEE 790
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + P+ VT+ LI C+ A L+ EM+E+ P ++ +L+ G+
Sbjct: 791 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGN 850
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EM+ G E +T +++D C EG V++AC+L + +G+ K G
Sbjct: 851 MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLG 910
Query: 336 L------VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
L GN A EV+ + K G + + + L++G + ++ L++
Sbjct: 911 LPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLK 970
Query: 390 KM 391
+M
Sbjct: 971 QM 972
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 107/254 (42%), Gaps = 19/254 (7%)
Query: 254 KGCN--PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ CN PN V F+ L+ + E VN+ S ++C L+ L +V
Sbjct: 146 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 205
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL--------- 362
++ VLP + Y ++ C GN A V+ E+ +K L
Sbjct: 206 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKR 265
Query: 363 --------PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
P + LI G ++ EA ++ +M+ G+ P+ +T+N L++ G
Sbjct: 266 SMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQG 325
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A R++ G++ + + ++ L++G + + ++ ++ EM+++G PD TY+
Sbjct: 326 DIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYS 385
Query: 475 SYMDGLSNARKSVR 488
++G + R
Sbjct: 386 LLIEGHCRGQNMAR 399
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 136/293 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+V IY LI F++ F A+ M + PD +N LI G + KK D A
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
EM E G P+ ++ I G+ +F EM+E G + V C L++ C
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G+V++AC +G+L Y L+ L G A E+ E+ KG P V
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI+G +L +AS + ++M++ G+ + + +N LL C G A L
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
S KG P+ +TY ++ GY + E L +EM +G +PD Y + +DG
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG 744
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 13/321 (4%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A KA + DG++ F P Y LI GF + + K Y+ +V + +
Sbjct: 365 AMEKAKALFDGMITFGVT-------PGARAYASLIEGFFREKNVRKG---YELLVEIKKR 414
Query: 223 PDVV---TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V+ T+ + G C + D A + +EM GC PNVV + TLI+ F + +F +
Sbjct: 415 NIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDA 474
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V + EM E G + L+ GL ++ +A +++ G P F Y +
Sbjct: 475 VRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISG 534
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
G A + V E+ + G +P+ + CT LI + K +EA M+++GIL D
Sbjct: 535 YIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGD 594
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ T+ L+ L G+ DA+ + KG+ PD +Y L+ G+++ ++ ++ +
Sbjct: 595 AKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFD 654
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM+ G ++ YN + G
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGF 675
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 138/295 (46%), Gaps = 3/295 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ + F++ +R D + + MR+ G P YN LI G K ++ D+A F
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMRE--QGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV + KPD T+ ISG+ +F A +EM E G PN V LI + +
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E + M+E G + T +L++GL G+V A E+ + +G+ P F Y
Sbjct: 575 KVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ GN A + DE+ + G +VI L+ G R + +A L+++M +
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
G P++VT+ +++ C G +A +L KGL PD Y LV G R N
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 155/365 (42%), Gaps = 52/365 (14%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALG 211
+ + +N VK ++ND F MR G+ P V Y LI+GF K KA
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMR----GKGIAPDVFSYGTLIDGFSKLGNMQKASS 651
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+D MV+ + +V+ +N+L+ GFCR+ + + A L EM KG PN V++ T+I G+
Sbjct: 652 IFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYC 711
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA----------------- 314
E + EM G S LVDG C V +A
Sbjct: 712 KSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAP 771
Query: 315 -------------CELVIDFSRRGVLPKDFDYFG---------LVEKLCGEGNAGIALEV 352
EL D R ++ FD FG +++ LC EGN A E+
Sbjct: 772 FNALINWVFKFGKTELTTDMINR-LMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKEL 830
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ K +P+VI T+L+ G ++ + E + ++++ GI PD++ ++ ++
Sbjct: 831 FHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLK 890
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHI-----LVSGYTRENRRKEGENLVNEMLDEGFI 467
G T A L K DG I L+SG+ + + E +V M+ +I
Sbjct: 891 EGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYI 950
Query: 468 PDLAT 472
PD +T
Sbjct: 951 PDSST 955
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 5/288 (1%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LIN + K + +A + MV + D T+ +L++G +N K + A +F EMR KG
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+V S+ TLI GF + ++ EM++ G + + +L+ G C G + KA
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
EL+ + S +G P Y +++ C G+ A ++ DE+ KG +P TTL++G
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT-VDADRL-RLLAST--KGL 431
RL A + E K G S FN L+ + G+T + D + RL+ + K
Sbjct: 746 CRLNDVERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFG 804
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +TY+I++ +E + + L + M +P + TY S ++G
Sbjct: 805 KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNG 852
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS YN+LI+G K + + A M + D V ++ILI G + + D A GL
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGL 337
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM G + + + ++ I E ++ + MI G + L++G
Sbjct: 338 VHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFR 397
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E V K EL+++ +R ++ + Y V+ +C G+ A +V E+ G P+V+
Sbjct: 398 EKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVI 457
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+ + + +A ++++M ++GI PD+ +N L+ L + +A L
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMV 517
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G PD TY +SGY + V EML+ G IP+
Sbjct: 518 ENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 152/360 (42%), Gaps = 36/360 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R+ D M + +V+ Y++LI+G +K R D A G M
Sbjct: 283 YNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA-YSILIDGLLKGRNADAANGLVHEM 341
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V D + ++ I + + A LF M G P ++ +LI GFF E+
Sbjct: 342 VSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNV 401
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+G + E+ + S T V G+C+ G + A +V + G P Y L
Sbjct: 402 RKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTL 461
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA------------ 384
++ + G A+ V+ E+ ++G P +LI GL + +K EA
Sbjct: 462 IKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGF 521
Query: 385 -----------SGLME------------KMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
SG +E +ML+ G++P+ V L+ + C G+ ++A
Sbjct: 522 KPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACS 581
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+G+ D TY +L++G + + + E + +EM +G PD+ +Y + +DG S
Sbjct: 582 AFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFS 641
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 193/458 (42%), Gaps = 51/458 (11%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFR---HDHTTFLFIVRSLASSYR 124
+I P +L L+SK P + ++ + +DS + +F F+ L +
Sbjct: 59 EINPEVVLSVLRSKRVDDPS------KLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGS 112
Query: 125 FSELHSVLNFISANPCP----------CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174
+ HSV+ + P C + + + +F ++ +++ +++ +
Sbjct: 113 IEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAV 172
Query: 175 LAFEAMRKL-IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
F + + L +D PS++ N L++ +K D Y MV V DV ++ +LI
Sbjct: 173 FVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIG 232
Query: 234 GFCRNKKFDLA---------------------LGLFREMREKGCNPNVVSFNTLIRGFFG 272
CR+ LA L L + M KG P+ S+N LI G
Sbjct: 233 AHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCK 292
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG--VLPKD 330
+++ ++ ++ EM +G +V IL+DGL A LV + G + P
Sbjct: 293 QKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMM 352
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---LRKGVEASGL 387
+DYF V + EG A + D + G P A +LIEG R +RKG E L
Sbjct: 353 YDYFICV--MSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYE---L 407
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ ++ K I+ T+ ++ +C G A + G P+ + Y L+ + +
Sbjct: 408 LVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQ 467
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++R + ++ EM ++G PD YNS + GLS A+K
Sbjct: 468 KSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 14/235 (5%)
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVK--ANRMNDGLLAFEAMR 181
R +++ + N C++ + +F F NR+ DG +F+
Sbjct: 747 RLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDG--SFDKF- 803
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G+P+ YN++I+ K + A + M + + P V+T+ L++G+ + +
Sbjct: 804 ----GKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRR 859
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-----IELGCEFSSV 296
+F E+ G P+ + ++ +I F E + + + +M ++ GC+ S
Sbjct: 860 SEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSIS 919
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
TC L+ G G + A ++V + R +P L+ + C N +A +
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 196/428 (45%), Gaps = 44/428 (10%)
Query: 96 FAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC--- 150
F W S+ +FRH ++ ++ L + SE S++ + + S +F+
Sbjct: 1 FTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILE 60
Query: 151 ---PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID-------- 185
+ I+ F+ + A+++ + D + + F+ RK+++
Sbjct: 61 TKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYF 120
Query: 186 -------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
G P S+ +N+L++ F K + A +D + + ++P VV++N L
Sbjct: 121 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 180
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
++G+ R D L M G P+V +++ LI G E K D+ + EM+ G
Sbjct: 181 MNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 240
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT L+DG C GRV A E+ + +LP Y L+ LC +G+ A +
Sbjct: 241 IPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 300
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++DE+ KG P TTLI+G + A ++M++E I D V + L+ LC
Sbjct: 301 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLC 360
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM G P +
Sbjct: 361 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVV 420
Query: 472 TYNSYMDG 479
TYN M+G
Sbjct: 421 TYNVLMNG 428
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C +G+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 136 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFR 195
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ML G+LPD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+
Sbjct: 196 LKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHC 255
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + ML + +PDL TYN+ + GL
Sbjct: 256 KNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 106 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 165
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G +PD+ TY+ ++GL K
Sbjct: 166 TKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESK 224
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 150/288 (52%), Gaps = 1/288 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ + D
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M+ G P+V +++ LI G E K D+ + EMI+ G + VT L+DG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDG 250
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + + P Y L+ LC +G+ A +++DE+ KG P
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M+KE I D V + L+ LC GR+VDA+++
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 140/281 (49%), Gaps = 1/281 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +++FVK + F+A+ K RPSV +N L+NG++K + D+ + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKW-SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDV T+++LI+G C+ K D A LF EM + G PN V+F TLI G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + +M+ +T L+ GLC +G + +A +L+ + S +G+ P Y L
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ A E + K+ +A T LI GL + + V+A ++ +ML G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
P+ T+ ++ + C G +L G P +T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 174/382 (45%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + + ++ P + VL +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL-EHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y+ + + FNIL+ F + + LA +F + + P+VVSFNTL+ G+
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A EL + G++P
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ + P +I TLI GL + +A L+++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D + Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G P++ TY
Sbjct: 364 DAEKMLREMLSVGLKPEIGTYT 385
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++M+ G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMI 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 220/491 (44%), Gaps = 68/491 (13%)
Query: 48 AHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTID-SFR 106
A T L + T + P ++ P+ L+ ++ + Q IF +A +F
Sbjct: 29 AVETPLQSYTVTPPIKPWPQRLFPNRLVAMIRRQ-----QNLDLALQIFHYAGKYHPAFT 83
Query: 107 HDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSND---------GIFSCPEME--- 154
H++ T+ I+ L+ + F + S+L + + CS D G+ S P+M
Sbjct: 84 HNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKT 143
Query: 155 --RIFHFAV-----------NAFVKANRMNDGLLAF------------------------ 177
RI F V NA V+ NR + L F
Sbjct: 144 FLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALC 203
Query: 178 -----EAMRKLIDGRPSVSI------YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
E RK+ D PS+ I Y ++ G+V + A + + PD
Sbjct: 204 KKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDAT 263
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ IL+ G+ + +F A+ + EM E G PN +++ +I G+ ERK E +N+ +M
Sbjct: 264 TYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDM 323
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E +S C ++D LC EGRV +AC++ ++ P + L+ LC EGN
Sbjct: 324 LEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNI 383
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ +E +++G + S++ TLI G+ + + EA+ L + ML++G +P+ T+N L
Sbjct: 384 WEARKLFNE-FERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNML 442
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ VG+ + ++ KG + TY ILV G + +R+E N+++ ++ G
Sbjct: 443 IKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGA 502
Query: 467 IPDLATYNSYM 477
+ D +N ++
Sbjct: 503 V-DFKAWNLFV 512
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 34/260 (13%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ +I R + F+ L E+++ G N + F T+IR + + + +
Sbjct: 88 TYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRI 147
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G S + L++ L R + L+ +S+
Sbjct: 148 QTFGVRRSVRSLNTLLNALVQNNR-FSSVHLLFKYSKS---------------------- 184
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
K G +P+V C LI+ L + A + ++M GI+P+ VT+ +
Sbjct: 185 -----------KFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTI 233
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L G + A R+ G PD TY IL+ GY ++ R + +++EM + G
Sbjct: 234 LGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGV 293
Query: 467 IPDLATYNSYMDGLSNARKS 486
P+ TY + G RKS
Sbjct: 294 EPNDITYGVIILGYCKERKS 313
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 19/383 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAV-NAFVK 166
+H T+ ++ +LA + R +E S+L + + G+ M+ I + A+ + K
Sbjct: 313 NHVTYCMLIDTLAKAQRGNESLSLLGEVVSR-------GVV----MDLIMYTALMDWLCK 361
Query: 167 ANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++++ F L D P+ Y VLI+ K D A M + P+V
Sbjct: 362 EGKIDEAKDMFR--HALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNV 419
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTF+ +I+G + A REM+E+G +PNVV++ T+I G F + +++ +E
Sbjct: 420 VTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHE 479
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G E + + LV+GL G++ KA L + + RGVL +Y L++ L GN
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A +V EL +K LP + I L L K EA +E+M G+ PD VT+N
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599
Query: 406 LLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
++ G+T A L+LL K + P+ +TY L+ G ++ + L+NEM
Sbjct: 600 MIAAQSREGKTAKA--LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSS 657
Query: 464 EGFIPDLATYNSYMDGLSNARKS 486
GF P T+ + S R+S
Sbjct: 658 SGFSPTSLTHRRVLQACSQGRRS 680
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N L++G+ K + + A +RM V DVV +N L++G CR + D A + M+
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PNVV++ I + D+ ++ EM+ G VT LV GLC +GR
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + G P Y L++ L +L ++ E+ +G + +I T L+
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K EA + L + P+ VT+ L++ LC G A+++ K +
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +++G + + + + EM + G P++ TY + +DG
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDG 463
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 162/390 (41%), Gaps = 76/390 (19%)
Query: 178 EAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+A R ++D P+V Y + I + + D A Y+ MVR V PDVVT + L
Sbjct: 226 DAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSAL 285
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
+ G C++ +F A LFREM + G PN V++ LI ++ +E +++ E++ G
Sbjct: 286 VGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGV 345
Query: 292 EF-----------------------------------SSVTCEILVDGLCNEGRVLKACE 316
+ VT +L+D LC G V A +
Sbjct: 346 VMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQ 405
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG-- 374
++ + + + P + ++ L G G A + + E+ ++G P+V+ T+I+G
Sbjct: 406 VLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSF 465
Query: 375 --------------------------LRRLRKGVEASGLMEK-------MLKEGILPDSV 401
+ L G++ +G +EK M + G+L D V
Sbjct: 466 KCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHV 525
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+ L++ L G A ++ + K L PD + Y++ ++ + KE E+ + EM
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
G PD TYN+ + S K+ + +
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALK 615
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 143/294 (48%), Gaps = 3/294 (1%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRV--KPDVVTFNILISGFCRNKKFDLALG 246
+V++ VL+ G + D+A + MVR DVV +N L+ G+C+ + A
Sbjct: 137 AVTVNTVLV-GLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFA 195
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M+ +G +VV +N+L+ G + D +M M G E + VT + + C
Sbjct: 196 VAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYC 255
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V A L + R+GVLP LV LC +G A + E+ K G P+ +
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHV 315
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+ L + ++G E+ L+ +++ G++ D + + L++ LC G+ +A + A
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ P+G+TY +L+ + E +++EM ++ P++ T++S ++GL
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 44/368 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL----IDGRPSVSIYNVLINGFVKCREFDKALGF 212
F +N VK + A + MR++ ID P+V Y +I+G KC + AL
Sbjct: 422 FSSIINGLVKRGWVGK---ATDYMREMKERGID--PNVVTYGTVIDGSFKCLGQEAALDV 476
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y M+ + V+ + + L++G +N K + A LFREM E+G + V++ TLI G F
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ E+ E +V + ++ LC G+ +A + + G+ P
Sbjct: 537 TGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVT 596
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---------RRLRKGVE 383
Y ++ EG AL++++ + + P++I +TLI GL + L +
Sbjct: 597 YNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMS 656
Query: 384 ASG--------------------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+SG + E M+ G+ D +N L+ LC G T
Sbjct: 657 SSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTR 716
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A + S +G+ PD +T++ L+ G+ + + ++ML G P++AT+N+ +
Sbjct: 717 KAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLL 776
Query: 478 DGLSNARK 485
GL +A +
Sbjct: 777 GGLESAGR 784
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 5/273 (1%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLA-LGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++R D V++N+++SGF +++ LA L EM ++G + V+ NT++ G +
Sbjct: 94 LLRSSESVDTVSYNVVMSGF--SEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDG 151
Query: 275 KFDEGVNMAYEMIELGC--EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D +A M+ G V LVDG C G + A + +GV
Sbjct: 152 RVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVG 211
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y LV LC G A ++VD + + G P+V+ T I R +A L E+M+
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMV 271
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G+LPD VT + L+ LC GR +A L G P+ +TY +L+ + R
Sbjct: 272 RKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGN 331
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +L+ E++ G + DL Y + MD L K
Sbjct: 332 ESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGK 364
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P YN +I + + KAL + M R +KP+++T++ LI G + A
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM G +P ++ +++ R+ D + + M+ G LV LC
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G KA ++ + S RG+ P + L+ G+ A D++ G P+V
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TL+ GL + E+ ++ +M K GI P ++T++ L+ V+A RL
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEM 830
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG P TY+ L+S +++ + + L NEM + G +P TY+ + G S R
Sbjct: 831 VGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLR 888
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++YN L+ KA+ + M + PD +TFN LI G ++ D A +
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M G +PNV +FNTL+ G + E + EM + G E S++T +ILV G +
Sbjct: 759 QMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQS 818
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++A L + +G LPK Y L+ G A E+ +E+ +G LP+
Sbjct: 819 NKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ G +LR G E ++ M ++G P T + + G + +A RL
Sbjct: 879 ILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRL 931
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 3/293 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YNV+++GF + M + V D VT N ++ G CR+ + D A L M
Sbjct: 106 YNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMV 164
Query: 253 EKGC--NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
G +VV +N+L+ G+ + +A M G V LV GLC G
Sbjct: 165 RGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGE 224
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V A ++V R GV P Y + + C A + +E+ +KG LP V+ +
Sbjct: 225 VDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSA 284
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ GL + + EA L +M K G P+ VT+ L++ L R ++ L ++G
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRG 344
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ D + Y L+ +E + E +++ L + P+ TY +D L A
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKA 397
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 146/372 (39%), Gaps = 72/372 (19%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ ++L + P +YNV IN + +A F + M +KPD VT+N +I+
Sbjct: 543 AFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIA 602
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
R K AL L M+ PN+++++TLI G F ++ + EM G
Sbjct: 603 AQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662
Query: 294 SSVT-----------------CEI------------------LVDGLCNEGRVLKACELV 318
+S+T EI LV LC G KA ++
Sbjct: 663 TSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVL 722
Query: 319 IDFSRRGVLPKDFDYFGLV-----------------------------------EKLCGE 343
+ S RG+ P + L+ L
Sbjct: 723 EEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESA 782
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G G + V++E+ K+G PS + L+ G + VEA L +M+ +G LP T+
Sbjct: 783 GRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTY 842
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ D VG A L +G+ P TY ILVSG+++ E + +M +
Sbjct: 843 NALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKE 902
Query: 464 EGFIPDLATYNS 475
+GF P T +S
Sbjct: 903 KGFSPSKGTLSS 914
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 19/365 (5%)
Query: 145 DGIFSCPEMER---IFH-----------FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV 190
DG F C E ++H F V++ V + N + EA+ + ++ R +
Sbjct: 462 DGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVL 521
Query: 191 ---SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
Y LI+G K A + + PD V +N+ I+ C K A
Sbjct: 522 LDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESF 581
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+ G P+ V++NT+I E K + + + M + + +T L+ GL
Sbjct: 582 LEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFE 641
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN-AGIALEVVDELWKKGNLPSVI 366
G V KA L+ + S G P + +++ C +G + + LE+ + + G +
Sbjct: 642 AGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADIT 700
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TL+ L +A ++E+M GI PD++TFN L+ G +A
Sbjct: 701 VYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQM 760
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G+ P+ T++ L+ G R E + ++NEM G P TY+ + G
Sbjct: 761 LYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNK 820
Query: 487 VRQTR 491
V R
Sbjct: 821 VEAVR 825
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A R+ + + M+K PS Y++L+ G+ K +A+ Y M
Sbjct: 772 FNTLLGGLESAGRIGESDMVLNEMKKR-GIEPSNLTYDILVTGYGKQSNKVEAVRLYCEM 830
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V P V T+N LIS F + A LF EM+ +G P +++ L+ G+ R
Sbjct: 831 VGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNG 890
Query: 277 DEGVNMAYEMIELG 290
E +M E G
Sbjct: 891 TEVRKFLKDMKEKG 904
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 23/309 (7%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ +++++ P S Y +I + ++ +K+ + M R V PDV T+ ILI
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FC+ + A F EMR GC+PNVV++ L+ + ++ + ++ + M++ C
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP 555
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++VT L+DGLC G + KACE+ G + DF YF EGN +
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDF-YF--------EGNDTCTIA- 605
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
P+V+ LI+GL + +K +A L++ ML G P+ + ++ L++ C
Sbjct: 606 ----------PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+G+ +A + L + G P TY L+ ++ R +++EML++ P++ T
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715
Query: 473 YNSYMDGLS 481
Y + +DGLS
Sbjct: 716 YTAMIDGLS 724
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 164/341 (48%), Gaps = 17/341 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +++F KA + F+ MR + P+V Y L++ ++K ++ +A + RM
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRS-VGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN----------------PNV 260
V P+ VT++ LI G C+ + A ++ ++ N PNV
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++ LI G +K + + M+ GCE + + + L+DG C G++ A E+ +
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
++ G LP Y L++++ +G +A++V+ E+ P+V+ T +I+GL ++ +
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L+ M ++G P+ VT+ L++ L G+ + +L ++KG P+ +TY +
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L++ E L++EM + L Y+ + G S
Sbjct: 789 LINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFS 829
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 167/386 (43%), Gaps = 22/386 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+R T+ +V+ LAS+ + V +SA+ C + I +FA A
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG---------FCMDRSTIGYFA-QAL 249
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K R D L E D + +I+G ++ F++A+ F RM + P+
Sbjct: 250 CKVGRWADALNMLEKE----DFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPN 305
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVT+ L+SGF + K+F + M +GCNPN FN+L+ G+ + +
Sbjct: 306 VVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFN 365
Query: 285 EMIELGCEFSSVTCEILVDGLCNE-----GRVLKACELVID--FSRRGVLPKDFDYFGLV 337
M G V I + +C + +L E V + + VL K +
Sbjct: 366 RMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNK-VNTANFS 424
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LCG G A +++ E+ +KG +P T +I L + +K ++ L ++M + G+
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD T+ L++ C G A + G P+ +TY L+ Y + + + ++
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNA 483
+ M+D P+ TY++ +DGL A
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKA 570
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 22/320 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF------ 241
P+ S++N L++G+ ++ A ++RM P V +NI I C ++
Sbjct: 339 PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELL 398
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
DL ++ EM C N V+ R G KF++ + EM+ G + T +
Sbjct: 399 DLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKV 458
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ LC +V K+ L + R GV P + Y L++ C G A DE+ G
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGC 518
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V+ T L+ + ++ ++A + +M+ P++VT++ L++ LC G A
Sbjct: 519 SPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578
Query: 422 L--RLLASTKGLD--------------PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+ +L+ ++ ++ P+ +TY L+ G + + + L++ ML G
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638
Query: 466 FIPDLATYNSYMDGLSNARK 485
P+ Y++ +DG K
Sbjct: 639 CEPNQIVYDALIDGFCKIGK 658
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 152/360 (42%), Gaps = 18/360 (5%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++ L + + S+ H +L+ + A C + ++ ++ F K +
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAA----------GCEPNQIVYDALIDGFCKIGK 658
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+++ F M K PSV Y LI+ K D A+ M+ D P+VVT+
Sbjct: 659 IDNAQEVFLRMTK-CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+I G + + + AL L M EKGC+PNVV++ LI G K D + + +M
Sbjct: 718 AMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD-YFGLVEKLCGEGNAGI 348
GC + VT +L++ C G +L L++D + PK Y V+ + A +
Sbjct: 778 GCAPNYVTYRVLINHCCAAG-LLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASL 836
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLR---RLRKGVEASGLMEKMLKEGILPDSVTFNC 405
L ++E+ +P LI+ RL +E + ++ + + +
Sbjct: 837 GL--LEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYAS 894
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ LC + +A L + KG+ PD + + LV G N+ E L EG
Sbjct: 895 LIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEG 954
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 8/272 (2%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D V +ISG F+ A+ MR C PNVV++ TL+ GF +++F +
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M+ GC + LV G CN G A +L + G P Y + +CG+
Sbjct: 330 NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQ 389
Query: 344 G---NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV----EASGLMEKMLKEGI 396
NA + L++V++++++ S + R GV +A ++++M+++G
Sbjct: 390 EELPNAEL-LDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGF 448
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD+ T+ ++ LC + + L G++PD TY IL+ + + ++ +
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS 508
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+EM G P++ TY + + +++ ++
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQ 540
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 39/269 (14%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + + ++++ P+V Y +I+G K E +KAL M P+VVT+ LI
Sbjct: 696 LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALI 755
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR-----GFFGE-------------- 273
G + K D +L LF++M KGC PN V++ LI G E
Sbjct: 756 DGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWP 815
Query: 274 --------------RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL-- 317
+KF + + EM + +L+D GR+ A EL
Sbjct: 816 KHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHK 875
Query: 318 -VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+++ S + Y L++ LC A + E+ +KG +P +I +L++GL
Sbjct: 876 ELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLI 935
Query: 377 RLRKGVEASGLMEKMLKEGI-LPDSVTFN 404
+ K EA L EG+ D+ +F+
Sbjct: 936 EVNKWDEALQLCYGRCHEGVNWQDNKSFD 964
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 121/327 (37%), Gaps = 66/327 (20%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ +G DR V R+ N+L+ CR+ +D AL +++ G P+ V++N L+
Sbjct: 158 REIGEDDREVLRRL------LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALV 211
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ + + G + EM G T LC GR A ++
Sbjct: 212 QVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNML--------- 262
Query: 328 PKDFDYFGLVEKLCGEGNAGI--------ALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ + F L LC + +G+ A+ + + +P+V+ TL+ G + +
Sbjct: 263 --EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 320
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ ++ M+ EG P+ FN L+ C+ G A +L +T G P + Y+
Sbjct: 321 QFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYN 380
Query: 440 ILVSGYTRENRRKEGE-----------------------------------------NLV 458
I + + E ++
Sbjct: 381 IFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQIL 440
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
EM+ +GF+PD +TY + L A+K
Sbjct: 441 KEMMRKGFVPDTSTYTKVITFLCQAKK 467
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLID-----GRPSVSIYNVLINGFVKCREFDKAL 210
++ +++F KA R+ A E ++L++ S +Y LI + ++A
Sbjct: 853 VYGMLIDSFSKAGRLET---ALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAF 909
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
Y M R + PD++ F L+ G K+D AL L +G N
Sbjct: 910 TLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVN 956
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 148/325 (45%), Gaps = 2/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + ++ + D + F+ + + G P V Y LI+ K + +A+ +D+M
Sbjct: 367 FNLVIKGLLRNKQWEDAIALFDLV--VDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKM 424
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VKP +VT + L+ G+C D AL L+ EM KG PN V++ TL++G+ ++ F
Sbjct: 425 KEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAF 484
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM + G T IL++GLC RV + E++ F G +P Y +
Sbjct: 485 DKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSI 544
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G G AL + ++ +KG P+++ T+ I+G R A L+ M GI
Sbjct: 545 INGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGI 604
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +N + C G A +L GL P+ Y+ V+GY E
Sbjct: 605 HPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASK 664
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLS 481
M+ + D Y + +DG S
Sbjct: 665 FYYSMIKQRIAADTEIYTTLIDGFS 689
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ VK RM++ L + M + V + L+ G+ E KAL +D
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEA 320
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VRD V P VT+ +LI G D L R+M E+G P+ FN +I+G +++
Sbjct: 321 VRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQW 380
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + + +++ G T L+ L +V +A L GV P L
Sbjct: 381 EDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSL 439
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +G AL++ E+ KG P+ + TTL++G + + +A L+ +M + G+
Sbjct: 440 LLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV 499
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
T+N L+ LC V R + D + ++G P MTY+ +++G+ +
Sbjct: 500 SCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALA 559
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
+ +M ++G P++ TY S++DG
Sbjct: 560 MYRQMCEKGITPNIVTYTSFIDG 582
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 39/326 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y L+ G++K + FDKA + M ++ V T+NILI+G C + +
Sbjct: 466 PNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEM 525
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +G P +++N++I GF + M +M E G + VT +DG C
Sbjct: 526 LKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCR 585
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A +L+I G+ P Y + C +GN AL + L K G P+V
Sbjct: 586 TNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTV 645
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGI------------------------------- 396
+ + G + L+ EAS M+K+ I
Sbjct: 646 YNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEML 705
Query: 397 ----LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENR 450
+PD TF L LC G +D + RLL LD P+ +TY++L++ + R+ +
Sbjct: 706 ANHNIPDDKTFTALTHGLCRSG-DIDGAK-RLLDDMTRLDVCPNTVTYNMLINAHIRDGK 763
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSY 476
+E L ++ML G +PD TYN +
Sbjct: 764 LQEAFQLHDKMLSSGVVPDDTTYNIF 789
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 145/338 (42%), Gaps = 15/338 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ +++ F + +++LN + N C E ++ +N
Sbjct: 464 FPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCG----------EYTYNILINGL 513
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+R+ + E +++ + P+ YN +INGFVK AL Y +M +
Sbjct: 514 CMVDRVCE---VDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGIT 570
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P++VT+ I G+CR DLA+ L MR G +P++ ++N I F + ++
Sbjct: 571 PNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHF 630
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+++ G + V G N + +A + ++ + Y L++
Sbjct: 631 LVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSK 690
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
GN ALE+ E+ N+P T L GL R A L++ M + + P++VT
Sbjct: 691 VGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVT 750
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+N L+ G+ +A +L + G+ PD TY+I
Sbjct: 751 YNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNI 788
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 4/275 (1%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RMV V PD + L+ R AL LF EMR KG + ++ ++R
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVV 200
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
R + V + EM G + I + GLC +A +++ G+ P+DF
Sbjct: 201 GRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFT 260
Query: 333 YFGLVEKLCGEGNAGIALEVVDE-LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y +V+ L G AL + D+ L G V TTL++G + +A L ++
Sbjct: 261 YNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEA 320
Query: 392 LKEGILPDSVTFNCLLEDLCDV-GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+++G+ P +VT+ L++ CD G T + +L +GL P +++++ G R +
Sbjct: 321 VRDGVTPTNVTYTVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQ 379
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ L + ++D G +PD+ TY + LS K
Sbjct: 380 WEDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHK 413
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ ++ LI + F++ + +M PDV + +I G C+ ++ ++A G+
Sbjct: 250 PNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGI 309
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G +PNVV +NTL++G +++E + EM + C VT ILVD LC
Sbjct: 310 LNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQ 369
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V + E++ G +P Y ++ C EG A+ ++ + G P+ ++
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +++GL + V+A LM +M+++G P+ VTFN L+ LC G A L
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G PD ++Y ++ G + E L+N M+ +G P+ Y+S LS
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSG 544
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 182/407 (44%), Gaps = 40/407 (9%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIF------ 148
D ++ ++R L + R+ + ++ + A CP C N G+F
Sbjct: 216 DVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRN-GLFERVHEV 274
Query: 149 -------SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS------VSIYNV 195
C R++ ++ K R+ E R +++ PS V YN
Sbjct: 275 HAQMAEHGCAPDVRMYATIIDGVCKEERL-------EVARGILNRMPSYGLSPNVVCYNT 327
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L+ G +++A G M D VTFNIL+ C+N D + + +M E G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C P+V+++ T+I GF E DE V + M GC ++V+ I++ GLC+ R + A
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAE 447
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
EL+ ++G P + L+ LC +G A+E++ ++ G P +I+ +T+I+GL
Sbjct: 448 ELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 507
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ EA L+ M+K+G+ P+++ ++ + L GR ++ + D
Sbjct: 508 GKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA 567
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ Y+ ++S + + M+ G +P+ +TY + GL++
Sbjct: 568 VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 178 EAMRKLIDGRPS------VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
EA+R L D PS V YN ++ G R + + MV P++VTF+ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I CRN F+ + +M E GC P+V + T+I G E + + + M G
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ V L+ GLC+ R +A L+ + + D + LV+ LC G +E
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
V++++ + G +P VI TT+I G + EA L+ M G P++V++ +L+ LC
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
R VDA+ L +G P+ +T++ L++ ++ ++ L+ +ML G PDL
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498
Query: 472 TYNSYMDGLSNA 483
+Y++ +DGL A
Sbjct: 499 SYSTVIDGLGKA 510
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 2/328 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V A R+ D L + M + P+ +Y+V + + F A+G +
Sbjct: 118 VRALCARGRIADALAVLDDMARR-GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEG 279
DV N+++ C D A+ L R++ GC P+VVS+N ++RG R++
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
++ EM+ GC + VT L+ LC G + E+ + G P Y +++
Sbjct: 237 QDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDG 296
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+C E +A +++ + G P+V+ TL++GL + EA GL+ +M + D
Sbjct: 297 VCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD 356
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VTFN L++ LC G + G PD +TY +++G+ +E E L+
Sbjct: 357 DVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLR 416
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSV 487
M G P+ +Y + GL +A + V
Sbjct: 417 SMAACGCRPNTVSYTIVLKGLCSAERWV 444
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 40/320 (12%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFD 207
CP + F+ V+ F+ N + D ++ E + ++++ P V Y +INGF K D
Sbjct: 353 CPLDDVTFNILVD-FLCQNGLVDRVI--EVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A+ M +P+ V++ I++ G C +++ A L +M ++GC PN V+FNTLI
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ ++ + + +M+ GC ++ ++DGL G +A EL+ ++G+
Sbjct: 470 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMS 529
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y + L GEG R+ K ++ +
Sbjct: 530 PNTIIYSSIASALSGEG--------------------------------RINKVIQ---M 554
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
E + + D+V +N ++ LC G T A + G P+ TY IL+ G
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614
Query: 448 ENRRKEGENLVNEMLDEGFI 467
E KE + ++ E+ +G +
Sbjct: 615 EGFVKEAQEILTELCSKGAL 634
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 18/294 (6%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN ++ G+ + + A + V P+ T+ L+ C + AL + +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P ++ + F V + ++ GC C +++ +C++G V
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 313 KACELVID-FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A L+ D G P Y ++ LC G ++++E+ G P+++ +TL
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 372 IEGLRRLRKGVEASGLMEK-------MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I L R +GL E+ M + G PD + +++ +C R A +
Sbjct: 259 IGHLCR-------NGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILN 311
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ GL P+ + Y+ L+ G +R +E E L+ EM D+ D T+N +D
Sbjct: 312 RMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R + ++ +++ L S+ R+ + +++ + CP F+ +N
Sbjct: 424 RPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQ----------GCPPNPVTFNTLINFLC 473
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + + M L++G P + Y+ +I+G K D+AL + MV+ + P+
Sbjct: 474 KKGLVEQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPN 531
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++ + S + + + +F +++ + V +N +I + D +
Sbjct: 532 TIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA 591
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
M+ GC + T IL+ GL +EG V +A E++ + +G L K +FG+V
Sbjct: 592 YMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMKHFGIV 645
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 198/449 (44%), Gaps = 36/449 (8%)
Query: 47 TAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLK--SKLHHHPQFTHYDFHIFAWASTIDS 104
T + T + F HL+ +N SS H L +K+ H+ Q F+++ +
Sbjct: 72 TGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQV----FYLYNQMR-LSG 126
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFA--VN 162
D T ++ L + R E +V+ GI + I + +
Sbjct: 127 ISPDCCTLNILLNCLCNVNRVGEGLAVM------------AGILRRGYIPDIVTYTTLIK 174
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD--- 219
+R++ L F M+KL P+ Y L+ G + AL + M+ D
Sbjct: 175 GLCMEHRISKAALLFTRMQKL-GCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSL 233
Query: 220 ---RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KP V++++I+I C++++ D A LF EM+ +G P V+S+ +L+ +
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------W 285
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM+ G + + VT +L+D LC EG+V++A +L+ +RG++P Y L
Sbjct: 286 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+E C G+ A E+ + KG P VI T LI G + K EA L ML+ G
Sbjct: 346 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 405
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ LL L G+ DA +L + G+ D Y I ++G + E
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L N++ D+ +N +DGL A K
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGK 494
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 4/279 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V +NVLI+ K + +A + M++ + P+++T+N LI GFC + A
Sbjct: 301 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 360
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF M KGC P+V+ + LI G+ K +E + + M+++G T L+ GL
Sbjct: 361 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 420
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGL-VEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G+V A +L G+ P D +G+ + LC G A+E+ ++L K N+
Sbjct: 421 QGGKVGDAKKLFGVMKVYGI-PGDLYIYGIFLNGLCKNGCLFEAMELFNKL-KSYNIKLD 478
Query: 366 IAC-TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I C LI+GL + K A L EK+ +E + PD VT+N ++ + C G+ V A+ L
Sbjct: 479 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 538
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
G PD +TY L+ G+ + ++ L++ M+
Sbjct: 539 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 577
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 146/329 (44%), Gaps = 9/329 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++A K R ++ FE M K+ P+V Y L+ +++A ++ M
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLM--------WEEAKRLFNEM 295
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+P+VVTFN+LI C+ K A L M ++G PN++++N+LI GF
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M GCE + +L++G C +V +A +L + G P Y L
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L G G A ++ + G + + GL + EA L K+ I
Sbjct: 416 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D FNCL++ LC G+ A L + L PD +TY+I++ + R + +
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +M G PD TY + + G ++K
Sbjct: 536 LFQKMEKNGCTPDKITYATLIRGFFESKK 564
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
++ P I+ +N K + + + F ++ + + + +N LI+G K +
Sbjct: 437 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY-NIKLDIECFNCLIDGLCKAGKL 495
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+ A ++++ ++ ++PDVVT+NI+I FCR + A LF++M + GC P+ +++ TL
Sbjct: 496 ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 555
Query: 267 IRGFFGERKFDEGVNMAYEMIE 288
IRGFF +K ++ V + + M++
Sbjct: 556 IRGFFESKKLEKVVELLHMMVQ 577
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 49/287 (17%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A F+ M+ P + +F L+SG + K + L+ +MR G +P+ + N
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLN--- 135
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
IL++ LCN RV + ++ RRG +
Sbjct: 136 --------------------------------ILLNCLCNVNRVGEGLAVMAGILRRGYI 163
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L++ LC E A + + K G P+ I TL++GL R A L
Sbjct: 164 PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Query: 388 MEKMLKEGIL------PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
++ML + L P ++++ +++ LC R +A L +G+ P ++Y L
Sbjct: 224 HQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +E + L NEM+++G P++ T+N +D L K +
Sbjct: 284 M--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 322
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 52/289 (17%)
Query: 152 EMERIFHFAVNAFVKANRMNDGLLAFEAMR--KLIDGR------------PSVSIYNVLI 197
E +R+F+ VN V+ N + +L + K+I+ + P++ YN LI
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
GF + + A + M +PDV+ + +LI+G+C+ K + A+ L+ M + G
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406
Query: 258 PNVVSFNTLIRGFF-----GERKFDEGVNMAYE--------------MIELGCEFSS--- 295
P+V ++ L+ G F G+ K GV Y + + GC F +
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466
Query: 296 ------------VTC-EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ C L+DGLC G++ A EL + + P Y ++ + C
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 526
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLM 388
G A + ++ K G P I TLI G ++L K VE +M
Sbjct: 527 GGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 575
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ KA ++ FE + + + +P V YN++I+ F + + KA + +M
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQE-ELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 540
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
++ PD +T+ LI GF +KK + + L M ++ + +V
Sbjct: 541 EKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 154/299 (51%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K +FD + ++M + ++ T++I I+ FCR + LAL +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + E V + +M+E+G + +VT LV GL
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +G P Y ++ LC G +AL +++++ K V+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L KM +GI PD T+N L+ LC+ GR DA RL
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF-IPDLATYNSYMDGLSNARK 485
K ++PD + ++ L+ + +E + E E L +EM+ PD+ YN+ + G ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALG 246
P + +N LI+ FVK + +A YD MV+ + PDVV +N LI GFC+ K+ + +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+FREM ++G N V++ TLI GFF R D + +M+ G +T IL+DGLC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
N G V A + +R + Y ++E LC G ++ L KG P+V+
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
TT++ G R EA L +M ++G LP+S T+N L+
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 173/418 (41%), Gaps = 51/418 (12%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
++ D TF +V L + SE +++ + C P++ + +N
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---------PDL-VTYGAVINGL 225
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K + LA + K+ G+ V IYN +I+G K + D A +++M +K
Sbjct: 226 CKRGEPD---LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+N LIS C ++ A L +M EK NP++V FN LI F E K E +
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 283 AYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL-------------- 327
EM++ C V L+ G C RV + E+ + S+RG++
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 328 ---------------------PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
P Y L++ LC GN AL V + + K+ ++
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TT+IE L + K + L + +G+ P+ VT+ ++ C G +AD L +
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ L+ EM GF D +T+ + L + R
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 171/386 (44%), Gaps = 72/386 (18%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR+++ + + M ++ +P + L++G + + +A+ +RMV
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +I+G C+ + DLAL L +M + +VV +NT+I G + D+
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M G + T L+ LCN GR A L+ D + + P + L++
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 341 CGEGNAGIALEVVDELWK-KGNLPSVIACTTLIEGL---RRLRKGVE------------- 383
EG A ++ DE+ K K P V+A TLI+G +R+ +G+E
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 384 -------------------ASGLMEKMLKEGILPDSVTFNCLL----------------- 407
A + ++M+ +G+ PD +T+N LL
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 408 ------------------EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
E LC G+ D L S KG+ P+ +TY ++SG+ R+
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNS 475
++E + L EM ++G +P+ TYN+
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNT 536
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+G + MV+ R P +V F+ L+S + KFDL + L +M+ G + N+ +++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
I F + + + +M++LG S VT L++G C+ R+ +A LV
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + LV L A A+ +V+ + KG P ++ +I GL + + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM K I D V +N +++ LC DA L TKG+ PD TY+ L+S
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++ML++ PDL +N+ +D K V +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 1/288 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K E A +D + + ++P VV+FN L+SG+ R D
Sbjct: 131 GYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEG 190
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K DE + EM++ G + VT L+DG
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDG 250
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ +G P Y L+ LC +G+ A +++DE+ K P
Sbjct: 251 HCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPD 310
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M+KE I D V + L+ LC GR+VDA+++
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ GL PD TY ++++ + ++ K G L+ EM +G +P + T
Sbjct: 371 GMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 175/382 (45%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E S++ + + S +F+ +
Sbjct: 5 TNSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + F R+ P + VL +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ + LA +F + + G P+VVSFNTL+ G+
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIR 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ +A EL + G++P
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ +L +G P +I TLI GL + +A L+++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ + PD +T+ L++ C G A R + + D + Y L+SG +E R
Sbjct: 304 MKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ E ++ ML G PD TY
Sbjct: 364 DAEKMLRGMLSVGLKPDNGTYT 385
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ +++ +++G AM +P V Y+VLING K + D+A ++ M
Sbjct: 174 FNTLMSGYIRLGDLDEGFRLKSAMHA-SGVQPDVYTYSVLINGLCKESKMDEANELFNEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + + P+ VTF LI G C+N + DLA+ +++++ +G +P+++++NTLI
Sbjct: 233 LDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIF-------- 284
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
GLC +G + +A +L+ + S + + P Y L
Sbjct: 285 ---------------------------GLCKKGDLKQARDLIDEMSMKELKPDKITYTTL 317
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ A E + K+ +A T LI GL + + V+A ++ ML G+
Sbjct: 318 IDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGL 377
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRL 422
PD+ T+ ++ + C G +L
Sbjct: 378 KPDNGTYTMIINEFCKKGDVKTGSKL 403
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C EG +A V D + K G PSV++ TL+ G RL E L M G
Sbjct: 142 LMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASG 201
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + +A+ L GL P+G+T+ L+ G+ + R
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ ++L +GF PDL TYN+ + GL + ++Q R
Sbjct: 262 EIYKQLLSQGFSPDLITYNTLIFGLCK-KGDLKQAR 296
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ FR RE + V F+T ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFIRDAIEFFRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 119
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 120 VWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMS 179
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K EA+ L +ML G++P
Sbjct: 180 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVP 239
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTF L++ C GR A + ++G PD +TY+ L+ G ++ K+ +L+
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLI 299
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM + PD TY + +DG
Sbjct: 300 DEMSMKELKPDKITYTTLIDG 320
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 192/418 (45%), Gaps = 42/418 (10%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH ++ + L + FSE S++ + + S +F+ + I+
Sbjct: 3 TFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIY 62
Query: 158 HFA--VNAFVKANRMNDGL------------LAFEAMRKLID------------------ 185
F+ + A++++ + D + + F+ RK+++
Sbjct: 63 VFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 122
Query: 186 ---GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R
Sbjct: 123 LECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 182
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D L MR G P+V +++ LI G E D+ + EM+ G + VT L
Sbjct: 183 DEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTL 242
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DG C GRV A E+ + +LP Y LV LC +G+ A ++DE+ KG
Sbjct: 243 IDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGL 302
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P TTLI+G + A ++M++E I D V + L+ LC GR+ DA++
Sbjct: 303 KPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEK 362
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + GL PD TY ++++ + ++ +G L+ EM G +P + TYN M+G
Sbjct: 363 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L M G
Sbjct: 137 LMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASG 196
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC DA+ L KGL P+ +T+ L+ G+ + R
Sbjct: 197 VQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAM 256
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDJ TYN+ + GL
Sbjct: 257 EIYKQMLSQXLLPDJITYNTLVYGL 281
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+ +G PD TY + +DG
Sbjct: 303 IMKGLXPDKITYTTLIDG 320
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 168/365 (46%), Gaps = 45/365 (12%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D A + +RK IDGR P V +YN +I+ K + +A G + M + DV
Sbjct: 176 KIGDTRAAIKFLRK-IDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADV 234
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE------- 278
VT+N LI GFC K A+GL EM K NPNV ++N L+ E K E
Sbjct: 235 VTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 279 ------------------GVNMAYEMIELGCEFSSV----------TCEILVDGLCNEGR 310
G + YE+ + F+++ T IL++G C
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L + ++ ++P Y L++ LC G +++DE+ +G VI ++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+GL + A L KM + I P+ TF LL+ LC GR DA + TKG
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL------SNAR 484
+ TY+++++G+ ++ +E ++++M D G IP+ T+ + + L A
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534
Query: 485 KSVRQ 489
K +RQ
Sbjct: 535 KLLRQ 539
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ ++RM+ R P ++ FN ++ F + K + A+ L + KG P++++
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI F + G ++ ++++ G +VT L+ GLC +G+V KA
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G Y L+ +C G+ A++ + ++ + P V+ T+I+ + + + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL +M +GI D VT+N L+ C VG+ +A L K ++P+ TY+ILV
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E + KE ++++ ML PD+ TY++ MDG
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 143/292 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +++ F K + + A+ R+ ++PD++T NILI+ FC + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ ++G P+ V+ NTLI+G + + + ++ +++ G + + V+ L++G+C
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A + + R P Y +++ +C A + E+ KG V+
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI G + K EA GL+ +M+ + I P+ T+N L++ LC G+ +A + +
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ PD +TY L+ GY K+ +++ N M G PD+ TY ++G
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 5/277 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+A K ++ + M K +P V Y+ L++G+ E KA ++ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKAC-VKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDV T+ ILI+GFC+NK D AL LF+EM +K P +V++++LI G +
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ EM + G +T L+DGLC G + +A L + + P F + L
Sbjct: 391 SYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKE 394
++ LC G A EV +L KG +V +I G ++G+ EA ++ KM
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING--HCKQGLLEEALTMLSKMEDN 508
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G +P++ TF ++ L A++L +GL
Sbjct: 509 GCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P N LI G + KAL F+D+++ + + V++ LI+G C+ A+
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKF 186
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R++ + P+VV +NT+I + E + EM G VT L+ G C
Sbjct: 187 LRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCI 246
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A L+ + + + P + Y LV+ LC EG A V+ + K P VI
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TL++G + + +A + M G+ PD T+ L+ C +A L
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + P +TY L+ G + R +L++EM D G D+ TY+S +DGL
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + N+LIN F + ++++ PD VT N LI G C + AL
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ +G N VS+ TLI G + ++ + V ++D +C
Sbjct: 151 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMC 210
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V +A L + + +G+ Y L+ C G A+ +++E+ K P+V
Sbjct: 211 KYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVY 270
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++ L + K EA ++ MLK + PD +T++ L++ V A +
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
S G+ PD TY IL++G+ + E NL EM + +P + TY+S +DGL +
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%)
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ D A+ F M P ++ FN ++ F + + V++++ + G + +T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL++ C+ G++ ++ +RG P L++ LC +G AL D+L
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G + ++ TLI G+ ++ A + K+ PD V +N +++ +C +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L + KG+ D +TY+ L+ G+ + KE L+NEM+ + P++ TYN +D
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 479 GLSNARK 485
L K
Sbjct: 278 ALCKEGK 284
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 167/344 (48%), Gaps = 14/344 (4%)
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLING 199
C+ND +S +++F + +++ A + K+I +++Y N LING
Sbjct: 398 CANDVTYS---------ILIDSFCRRGKLDT---AIHFLGKMIMAGIKITVYPYNSLING 445
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
K A+ F+D M+ +KP VV++ LISG+C K A L+ EM KG PN
Sbjct: 446 HCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPN 505
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
+F TLI F + + + EM+E + VT ++++G C EG +KA EL+
Sbjct: 506 TYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLN 565
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
++G++P + Y L+ LC G A + +D+L ++ + + + L+ G +
Sbjct: 566 QMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ +A G+ +M+K G+ D V + L++ T L + L PD + Y
Sbjct: 626 RLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYT 685
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ GY++ K+ + + M+DEG P++ TY + ++ L A
Sbjct: 686 SMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKA 729
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 11/320 (3%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V+AF NR+ K + PS+ +YN LIN K +FD+A + M
Sbjct: 347 VVDAFDLVNRV-----------KKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEK 395
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ + VT++ILI FCR K D A+ +M G V +N+LI G
Sbjct: 396 GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAA 455
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
V+ EMI+ G + + V+ L+ G CN+G++ +A L + + +G+ P + + L+
Sbjct: 456 VSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L A + DE+ ++ +P+ + +IEG + V+A L+ +M+++G++PD
Sbjct: 516 LFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ T+ L+ LC GR +A + + + M Y L+ GY +E R ++ +
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCR 635
Query: 460 EMLDEGFIPDLATYNSYMDG 479
EM+ G DL Y +DG
Sbjct: 636 EMVKRGVDMDLVCYAVLIDG 655
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 151/330 (45%), Gaps = 5/330 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFY 213
+++ ++ K R+ + A E LI + S Y L+ G K +EF+ G
Sbjct: 263 VYNVLIHGLCKNKRVWE---AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ P + L+ G R K A L +++ G P++ +N LI +
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
KFDE + EM E G + VT IL+D C G++ A + G+ + Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C GN A+ DE+ KG P+V++ T+LI G K EA L +M
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI P++ TF L+ L R DA RL + + P+ +TY++++ G+ +E +
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L+N+M+ +G +PD TY + L +
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCST 589
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 139/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + + L+ G + + A +R+ + P + +N LI+ C++ KFD A L
Sbjct: 329 PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELL 388
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+EM EKG N V+++ LI F K D ++ +MI G + + L++G C
Sbjct: 389 FKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCK 448
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A + +G+ P Y L+ C +G A + E+ KG P+
Sbjct: 449 LGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI L R + +A L ++ML++ ++P+ VT+N ++E C G TV A L
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KGL PD TY L+S R E + ++++ E F + Y++ + G
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 163/363 (44%), Gaps = 36/363 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK------------LIDG------------------ 186
F + ++V+ RM D +L F MR+ +++G
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
RP + IY +I F + + F KA RM + +VV +N+LI G C+NK+
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVW 278
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+ + + +KG + V++ TL+ G ++F+ G + EMIELG + LV
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GL +G+V+ A +LV + G +P F Y L+ LC +G A + E+ +KG
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+ + + LI+ R K A + KM+ GI +N L+ C +G A
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KGL P ++Y L+SGY + + E L +EM +G P+ T+ + + L
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518
Query: 483 ARK 485
A +
Sbjct: 519 ANR 521
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 2/319 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A +ANRM D F+ M + + P+ YNV+I G K KA ++M
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQ-NMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ + PD T+ LIS C + A ++ + N + ++ L+ G+ E +
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + EM++ G + V +L+DG E L+ + + + P Y +
Sbjct: 628 RDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSM 687
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G+ A + D + +G P+++ TTLI L + +A L ++ML
Sbjct: 688 IDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNS 747
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT+ C L+ L G A +L KGL + ++Y+ILV G+ + R +E
Sbjct: 748 TPNHVTYCCFLDHLAREGSMEKAVQLH-NDMLKGLLANTVSYNILVRGFCKLGRVEEATK 806
Query: 457 LVNEMLDEGFIPDLATYNS 475
L++EM+D PD TY++
Sbjct: 807 LLDEMIDNAIFPDCITYST 825
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+ L++G+ K ALG MV+ V D+V + +LI G + + GL + M
Sbjct: 614 YSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMH 673
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++ P+ V + ++I G+ + + MI+ GC + VT L++ LC G +
Sbjct: 674 DQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMD 733
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L + P Y ++ L EG+ A+++ +++ K G L + ++ L+
Sbjct: 734 KAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILV 792
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + EA+ L+++M+ I PD +T++ ++ C G A KGL
Sbjct: 793 RGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLK 852
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
PD + Y+ L+ G + L ++M+ G P+ AT+ S G S
Sbjct: 853 PDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGAS 901
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP IY +I+G+ K KA G +D M+ + P++VT+ LI+ C+ D A
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737
Query: 247 LFREM--------------------RE--------------KGCNPNVVSFNTLIRGFFG 272
L++EM RE KG N VS+N L+RGF
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCK 797
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ +E + EMI+ +T ++ C G + A E +G+ P
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
Y L+ C G G A E+ D++ ++G P+ +L G R
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASR 902
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N KA M+ L ++ M + + P+ Y ++ + +KA+ ++ M++
Sbjct: 723 INELCKAGLMDKAELLWKEML-VSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGL 781
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + V++NIL+ GFC+ + + A L EM + P+ ++++T+I D +
Sbjct: 782 L-ANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAI 840
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
M+ G + ++ L+ G C G + KA EL D RRGV P
Sbjct: 841 EFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKP 888
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L+RG R+ E + +E C+F SS+ ++L+ E R+ + + +
Sbjct: 132 LLRGGLDPREVFEALLDCFE----KCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQC 187
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
++P+ ++ L + L + E+ G P + +I L+ +A
Sbjct: 188 ELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA 247
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++++M + + V +N L+ LC R +A ++ KGL +TY LV G
Sbjct: 248 KEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLG 305
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ + G +++EM++ GF+P A +S ++GL K V
Sbjct: 306 LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVV 348
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 8/299 (2%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V YN LING+ K + AL M R+RV P V TFN +I GFC K A+
Sbjct: 301 VLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLT 360
Query: 250 EMREKGCNPNVVSFNTLIRG--FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G +PN V+FN+LI G GERK + + M E G T I +D LC+
Sbjct: 361 QMAGAGLSPNTVTFNSLISGQCSVGERKI--ALRLLDLMEEYGVLPDRQTYAIFIDALCD 418
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ +A L +G+ + Y LV C G+ A +++++ + +P V
Sbjct: 419 EGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHT 478
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+GL ++++ A L++KM K+GI P + TFN L++ + + DA ++
Sbjct: 479 YNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENL---VNEMLDEGFIPDLATYNSYMDGLSNA 483
+ G PD TY + +S E KE EN+ V EM + G PD+ TYN+ + +A
Sbjct: 539 SSGCKPDKQTYTLKISTDWFEGATKE-ENIDMAVVEMHEAGVFPDVETYNAIIKAYVDA 596
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + A R++D F M + RP V Y VL++G K R +A M
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGW-CRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V P+VVT+N LI G C+ +FD L +M + +P+ ++ ++ G K
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
G + +E I G +T L++G C G + A +++ R V P + +
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEV 342
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A+ + ++ G P+ + +LI G + + A L++ M + G+
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD T+ ++ LCD G+ +A L KG+ + Y LV GY +
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ +M E +PD+ TYN+ +DGL ++
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKR 491
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 165/404 (40%), Gaps = 48/404 (11%)
Query: 107 HDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVK 166
+D ++ +++ L ++ R + V +S C G+ + + ++ K
Sbjct: 159 YDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWC---RPGVHT-------YTVLLDGLCK 208
Query: 167 ANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD- 224
R+ + L E + K + P+V YN LI G + FD ++M R PD
Sbjct: 209 VRRVGEAEALLGEMVNKGV--VPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDC 266
Query: 225 ----------------------------------VVTFNILISGFCRNKKFDLALGLFRE 250
V+T+N LI+G+C+ AL + +
Sbjct: 267 WTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQL 326
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+ NP V +FN +I GF K + + +M G ++VT L+ G C+ G
Sbjct: 327 MKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGE 386
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A L+ GVLP Y ++ LC EG A + L KG + T+
Sbjct: 387 RKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTS 446
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ G ++ A GLMEKM E +PD T+N L++ LC V R A L +G
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
++P T++IL+ + + + + +M+ G PD TY
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 4/316 (1%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+A R+ L +F AM K P+ YN LIN K A RM + PD
Sbjct: 67 RAPRLAHLLASFGAMLK-SGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDT 125
Query: 226 VTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
T+N L+ G CR A GLF +M R G + S+ LI+G + D+ +
Sbjct: 126 FTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFA 185
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M C T +L+DGLC RV +A L+ + +GV+P Y L+ LC EG
Sbjct: 186 KMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEG 245
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
++++++ + + P T ++ GL + K + ++ + + +G+ + +T+N
Sbjct: 246 RFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYN 305
Query: 405 CLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L+ C G A D L+L+ + ++P T++ ++ G+ + + + +M
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNR-VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG 364
Query: 464 EGFIPDLATYNSYMDG 479
G P+ T+NS + G
Sbjct: 365 AGLSPNTVTFNSLISG 380
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 154/388 (39%), Gaps = 54/388 (13%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI------FHFAV 161
D T+ + +L + E HS +FSC M+ I + V
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHS----------------LFSCLPMKGIKAHNVIYTSLV 448
Query: 162 NAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ + + ++ AF M K+ + P V YN LI+G K + D+A+ D+M +
Sbjct: 449 HGYCQVGDIDS---AFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQ 505
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR-GFFGERKFDE 278
++P TFNILI +KK A ++ +M GC P+ ++ I +F +E
Sbjct: 506 GIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEE 565
Query: 279 GVNMA-YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
++MA EM E G T ++ + G KA + + P Y L+
Sbjct: 566 NIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+C + ++ +++WK + +R L++ L E+M +
Sbjct: 626 NYMCNKDDSDAFDN--EKIWK-------------MVDVRNLQE------LFEQMCESDAA 664
Query: 398 PDSVTFNCLLEDLCDVGRTVDADR--LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P T+ LL LC+ R + + L++ ++ LD D Y L+ Y +E
Sbjct: 665 PGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDY--LLGCYCNLEMYREAC 722
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
M + F P L + + GL ++
Sbjct: 723 EQFRSMAHQSFQPGLKSCCLLLSGLCDS 750
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 92/242 (38%), Gaps = 36/242 (14%)
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L F M + G PN ++NTLI + M E G + T L+ G
Sbjct: 75 LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134
Query: 305 LCNEGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LC G + AC L + RR G + Y L++ LC G +D+
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGR-------IDD-------- 179
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
A + KM + P T+ LL+ LC V R +A+ L
Sbjct: 180 --------------------ACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALL 219
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG+ P+ +TY+ L+ G +E R + L+ +M + PD TY + GL
Sbjct: 220 GEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKH 279
Query: 484 RK 485
K
Sbjct: 280 GK 281
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 59/153 (38%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P +S Y L+ G ++ +M + + D + L+ +C + + A
Sbjct: 662 DAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREA 721
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
FR M + P + S L+ G V++ +M+ LG + V ++L+D
Sbjct: 722 CEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDC 781
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
L +G E++ + + Y LV
Sbjct: 782 LHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 36/361 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V A R +GL + M++L RP+ Y L++ + + ++ ++A + M +
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKEL-GWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P VT +++ +CR + A+ +F M+ KGC PNV ++N +++GF K + +
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M E G E VT +L+ G C +G + A L+ G+ + Y L++ L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A + D L +G P+ + T+I GL + K A +EKM+ G PD+
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDT 475
Query: 401 VTFNCLLEDLCD-----------------------VGRTVDADRL----------RLLAS 427
T++ +E+LC V T+ DRL R+
Sbjct: 476 YTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQ 535
Query: 428 --TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G PD +TY V Y E R E EN+V EM G I D YN+ +DG ++ K
Sbjct: 536 MVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGK 595
Query: 486 S 486
+
Sbjct: 596 T 596
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 148/313 (47%), Gaps = 1/313 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNA+ + RM+ + FE+M KL P+V YN ++ GF + KA+ D+M
Sbjct: 307 VNAYCREGRMSGAVRVFESM-KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+PDVVT+N+LI G C + + A L R M G + ++N LI K DE
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ + G +SVT +++GLC G+ AC + G P + Y +E L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + L +DE+ +K PS + T +I+ L + R A+ + +M+ G PD
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ + C+ GR +A+ + + G+ D M Y+ L+ G+T + ++
Sbjct: 546 VTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKH 605
Query: 461 MLDEGFIPDLATY 473
M +P+ T+
Sbjct: 606 MTGVASMPNHFTF 618
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 4/299 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP +N LI G+ + ++ D A +D+M D V++ LI GFC + D AL
Sbjct: 161 RPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALE 220
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LFRE+ + P++ + L++G R+ +EG+ M +M ELG ++ LVD C
Sbjct: 221 LFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWC 276
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E + +A +++ + G++P +V C EG A+ V + + KG P+V
Sbjct: 277 REQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVW 336
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+++G + K +A L+++M + G+ PD VT+N L+ C G A RL L
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL D TY++L+ + + E +L + + G P+ T+N+ ++GL K
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGK 455
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 154/378 (40%), Gaps = 52/378 (13%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ ++A K ++++ F+ + + RP+ +N +ING K +FD A F
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGL-EYRGIRPNSVTFNTVINGLCKGGKFDVACTFL 463
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++MV PD T++ I C+ K L EM +K P+ V++ +I F E
Sbjct: 464 EKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKE 523
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R + + +M+ LGC VT V CNEGR+ +A +V++ + G++ Y
Sbjct: 524 RNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAY 583
Query: 334 FGLVEKLCGEGN-----------AGIA--------------------------------- 349
L++ G G+A
Sbjct: 584 NTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWK 643
Query: 350 -LEVVD-----ELWKKGNLPSVI-ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ D EL KK ++PS A ++EG R+ E + L+ M ++ + +
Sbjct: 644 TIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDI 703
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L+ C + DA L G P+ ++Y L+SG+T E + + + +
Sbjct: 704 YTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLR 763
Query: 463 DEGFIPDLATYNSYMDGL 480
+ + D + +DGL
Sbjct: 764 WKEYNTDEIVWKIIIDGL 781
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 147/379 (38%), Gaps = 56/379 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N K + + +A + K++ P Y+ I K + + L F D
Sbjct: 443 FNTVINGLCKGGKFD---VACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFID 499
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ VKP V + I+I + + + LA ++ +M GC+P+VV++ T +R + E
Sbjct: 500 EMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEG 559
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E N+ EM + G ++ L+DG + G+ A ++ + +P F +F
Sbjct: 560 RLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFF 619
Query: 335 GLVEKLCGEGNA----------GIALEVVD-----ELWKKGNLPSVIAC----------- 368
L+ L A +E+ D EL KK ++PS
Sbjct: 620 ILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEE 679
Query: 369 -------------------------TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
T+L+ +LR +A L+ M+ G LP+ +++
Sbjct: 680 RRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISY 739
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
LL G+ A + K + D + + I++ G R+ ++++ +
Sbjct: 740 QYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQ 799
Query: 464 EGFIPDLATYNSYMDGLSN 482
P TY + LS
Sbjct: 800 MKCKPSDETYAMLTEELST 818
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFD 207
S P R + + F + R+++ M++ D P + IY L+N F K R +
Sbjct: 661 SVPSSARAYLAILEGFSEERRLDEVTSLVSHMKE--DDLPLNEDIYTSLVNCFCKLRMYP 718
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A M+ P+++++ L+SGF + D A +FR +R K N + + + +I
Sbjct: 719 DAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIII 778
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
G + D +M + ++ C+ S T +L + L
Sbjct: 779 DGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 158/339 (46%), Gaps = 24/339 (7%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +R+ I+G+ V +Y+ +I+G K + + A Y M+ R+ P VVT N LI
Sbjct: 195 ALQMLRQ-IEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLI 253
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G+C +F A GL REM K NP+V +FN L+ E K E + M++ G
Sbjct: 254 YGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVM 313
Query: 293 FSSVTCEILVDGLC-----NEGR---------------VLKACELVIDFSRRGVLPKDFD 332
VT L+DG C N+ + V KA L + R + P
Sbjct: 314 PDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVT 373
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC G A E+VDE+ G +I +LI+ L + +A L++K+
Sbjct: 374 YNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIK 433
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+GI D T+N L++ LC GR DA + KG + TY I+++G E
Sbjct: 434 DQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLN 493
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E E L+++M D G +PD T + + L K+ R +
Sbjct: 494 EAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEK 532
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 159/321 (49%), Gaps = 20/321 (6%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L++ PSV + +++ VK + + + + ++ + +KP++V+ +ILI+ +C +
Sbjct: 64 LLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMR 123
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A +F ++ + G +PN ++ TL++GF K E ++ ++ LG F+ V+ L+
Sbjct: 124 FAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLI 183
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC G A +++ + V Y +++ LC + A E+ E+ K
Sbjct: 184 NGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRIS 243
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V+ +LI G + + EA GL+ +M+ + I PD TFN L++ LC G+ +A
Sbjct: 244 PTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSG 303
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN---------EMLDEGF------- 466
+ +G+ PD +TY L+ GY N + +++ + +M+D+
Sbjct: 304 IAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMR 363
Query: 467 ----IPDLATYNSYMDGLSNA 483
PD TYNS +DGL +
Sbjct: 364 CRRIAPDTVTYNSLIDGLCKS 384
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 19/260 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK------------LIDGRPSVS-------IYNVLI 197
F+ V+A K ++ + M K L+DG V+ +Y+++I
Sbjct: 284 FNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVI 343
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
NGF K + DKAL + M R+ PD VT+N LI G C++ + A L EMR+ G
Sbjct: 344 NGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQP 403
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
+++++N+LI D+ + + ++ + G + T IL+DGLC +GR+ A +
Sbjct: 404 ADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVI 463
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
D +G + Y ++ LC EG A ++ ++ G +P + C T+I L
Sbjct: 464 FQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFE 523
Query: 378 LRKGVEASGLMEKMLKEGIL 397
K A L+ +M+ G+L
Sbjct: 524 NDKNERAEKLLREMIARGLL 543
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 39/281 (13%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D + + RM+ P V+ F ++S + K + + LF ++ G PN+VS + L
Sbjct: 53 DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112
Query: 267 IRGF--FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
I + G+ +F ++ +++++G +++T LV G C +V +A
Sbjct: 113 INCYCHLGQMRF--AFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G Y L+ LC G AL+++ ++ K V+ +T+I+GL + + +A
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 230
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L +M+ TK + P +T + L+ G
Sbjct: 231 YELYSEMI-----------------------------------TKRISPTVVTLNSLIYG 255
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y + KE L+ EM+ + PD+ T+N +D L K
Sbjct: 256 YCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGK 296
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 182/379 (48%), Gaps = 10/379 (2%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCP---CSNDGIFSCPEMERIFHFAVNAFVK 166
++F ++R A+ F ++++L + A ++ I S R AV+ F
Sbjct: 30 SSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYF-- 87
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+R + FEA+ P Y +++G K +D L +Y++MV + +P ++
Sbjct: 88 NSRTEEACRLFEAIEA-----PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLL 142
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ +L+ G C+ K + A +F EM KG P+++++++LI G + DE + M
Sbjct: 143 TYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 202
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
I G ++V +V GLC GR+ +A + + + RR + P+ Y +V G G
Sbjct: 203 IARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKV 262
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A V++E+ + P I+ T IE L + + EA + E M+++G PD T+ +
Sbjct: 263 EEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 322
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+++ C G A + L + P+ Y +++ G+ + +R +E L +L +G
Sbjct: 323 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 382
Query: 467 IPDLATYNSYMDGLSNARK 485
+P TYN+ ++ L +K
Sbjct: 383 LPSTVTYNTVINALCKLKK 401
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 166/335 (49%), Gaps = 5/335 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ V+ KA+++ FE M RK +P + Y+ LI+G K D+A D
Sbjct: 144 YTVLVDGLCKAHKVERACDVFEEMIRK--GHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P V + +++G C+ + A+ +EMR + P V +++ ++ G+ G K
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 261
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + EM + C +++ + ++ L + GR +A ++ +G P Y
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 321
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C EG+ A V+ + K P+ T +++G + + EA L +++LK+G
Sbjct: 322 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 381
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTK-GLDPDGMTYHILVSGYTRENRRKE 453
ILP +VT+N ++ LC + + +A + LR + K L+P +TY +++ G + +
Sbjct: 382 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 441
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+L+ EM+D G IPD TY S + L+ A K R
Sbjct: 442 AFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 476
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 46/365 (12%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A V+ +++D L F++ P+VS +N+L+ GF +F+ M +
Sbjct: 6 ALVRGGQLSDALGFFQSSIS----EPNVSSFNILLRGFAARDDFEVVNALLREMKARGIT 61
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCN-------PNVVSFNTLIRGFFGERK 275
+ T +++S C + D A+ F E+ C P+ V++ ++ G F
Sbjct: 62 SNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGN 121
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+D G+ +M+ CE + +T +LVDGLC +V +AC++ + R+G P Y
Sbjct: 122 YDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSS 181
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGV---------- 382
L++ L G A ++VD + +G P+ +A T+++ GL R+++ V
Sbjct: 182 LIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 241
Query: 383 ----------------------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
EA +ME+M PD++++ +E L +GR +A+
Sbjct: 242 LRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 301
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ KG PD TY I++ + +E +++ M P+ Y MDG
Sbjct: 302 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 361
Query: 481 SNARK 485
+ +
Sbjct: 362 VKSSR 366
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 154/358 (43%), Gaps = 51/358 (14%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID-----GRPSVSI-YNVLINGFVKCREFDKALGFYD 214
++ KA R+++ RKL+D G P ++ Y ++ G KC +A+
Sbjct: 183 IDGLSKAGRVDEA-------RKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 235
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R R++P V T++ +++G+ K + A + EM ++ C P+ +S+ I +
Sbjct: 236 EMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIG 295
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG------------------------- 309
+ +E + M+E GC+ T I++D C EG
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355
Query: 310 ----------RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
R+ +A EL + G+LP Y ++ LC ALE++ E+ ++
Sbjct: 356 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415
Query: 360 GNL--PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
PS++ + +I GL ++ A L+ +M+ G++PD T+ L++ L G+
Sbjct: 416 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVS 475
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L G+ PD TY LV R + +L+ EM+ G P+ T+ +
Sbjct: 476 RAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKA 532
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 16/299 (5%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ FIV + E +V+ ++ C P+ F + A R
Sbjct: 248 TYSFIVTGYIGMGKVEEAFAVMEEMADRDCA---------PDTISYTMF-IEALYSIGRR 297
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ FE M + +P + Y ++I+ F K A M + VKP+ + +
Sbjct: 298 EEAEKVFETMVEK-GCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 356
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
++ GF ++ + + AL L++ + + G P+ V++NT+I +K DE + + EM
Sbjct: 357 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 416
Query: 291 CEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
E S VT +++ GL G +A +L+ + GV+P F Y L++ L G G
Sbjct: 417 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 476
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILPDSVTFNCL 406
A+E+++E+ K G P TL++ L R V+A+ L+++M++ G P+ TF +
Sbjct: 477 AMELLEEMLKAGIFPDDHTYGTLVQIL--CRSDVDAAWDLLQEMMRNGHTPNEFTFKAV 533
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 13/338 (3%)
Query: 160 AVNAFVKANRMNDGLL-AFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRM 216
A+N +K +N G+L A E ++++ S++ Y +LING + ++A+ RM
Sbjct: 109 ALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL-RM 167
Query: 217 VRDR---------VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ VK +VV ++I+I CRN D + EM G PN ++ +LI
Sbjct: 168 IEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLI 227
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
RG G KF EG + EMI G + S +L+DGLC G +++A E+ + RG
Sbjct: 228 RGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE 287
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P L+ C +GN +A E+ D + + G V I G ++ + +A +
Sbjct: 288 PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRV 347
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M +EG++P+ VT+N L++ LC G A + GL PD +T IL+ G +
Sbjct: 348 FDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCK 407
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R + L N++++ G PD+ +Y + G +R+
Sbjct: 408 SKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
L E +R+ +D SV ++ VLI+G K +A +D MV +P++VT L+ G
Sbjct: 242 LVDEMIRRGLD--VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGG 299
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+C D+A LF + E G +V ++N I G+ + + V + EM G +
Sbjct: 300 YCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPN 359
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
VT L+D LC G V A E+V R G+ P L++ LC A+ + +
Sbjct: 360 IVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFN 419
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+L + G P V + T LI G R+ EA L+ M + ++P VT++CL++ LC G
Sbjct: 420 QLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSG 479
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R +A RL KG PD +TY IL+ ++ E L N+M+ G PD+ Y
Sbjct: 480 RISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYT 539
Query: 475 SYMDGLSNARK 485
+DG + +
Sbjct: 540 IMIDGYCKSER 550
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y LI G +F + G D M+R + V F +LI G C+N A +
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +G PN+V+ L+ G+ + D + + E G + T + + G C
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCK 337
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV A + + R GV+P Y L++ LC G A E+V + + G P ++
Sbjct: 338 VGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVT 397
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C L++GL + ++ +A L ++++ G+ PD ++ L+ C R +A L
Sbjct: 398 CCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMH 457
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K L P +TY L+ G R R L+NEM +G +PD TY+ +D L
Sbjct: 458 LKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 510
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ V YNV I+G+ K A+ +D M R+ V P++VT+N LI C+ + A
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + M G P++V+ L+ G ++ D+ + + +++E G + IL+ G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R+ +A L+ D + ++P Y L++ LC G A +++E+ KG LP I
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ L++ L + + EA L +M+K G+ PD + + +++ C R +A L
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
K L PD +TY IL + + VN + D
Sbjct: 562 HMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRD 598
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 10/284 (3%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
+ + ++++ D V N ++ G C N AL E+ G + N VS+ LI
Sbjct: 91 SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150
Query: 269 GFFGERKFDEGVNMAYEMIELG---------CEFSSVTCEILVDGLCNEGRVLKACELVI 319
G + +E VN+ MIE + + V I++D LC G V + E
Sbjct: 151 GLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYN 209
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ GV P +F Y L+ LCG G +VDE+ ++G SV T LI+GL +
Sbjct: 210 EMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNG 269
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
VEA + ++M+ G P+ VT L+ C G A L G D TY+
Sbjct: 270 MLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYN 329
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ + GY + R ++ + +EM EG +P++ TYNS +D L A
Sbjct: 330 VFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKA 373
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++A K +++ + F M K P V Y ++I+G+ K D+A+ + M
Sbjct: 503 YSILLDALWKKQHLDEAVFLFNQMIKR-GLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561
Query: 217 VRDRVKPDVVTFNILISG 234
+ PD+VT+ IL +
Sbjct: 562 HMKNLVPDIVTYTILFNA 579
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 188/421 (44%), Gaps = 42/421 (9%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN--DGIFSCPEMERI-----F 157
F H +F ++ +L + F S+L + S D +FSC E ++ F
Sbjct: 100 FDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSSF 159
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ +V++ R+ DG+L F+ M + P V + L++G VK R F A+ +D M+
Sbjct: 160 DLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMI 219
Query: 218 RDRVKPDV-----------------------------------VTFNILISGFCRNKKFD 242
++PDV V +N+LI G C+ +K
Sbjct: 220 NVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+G+ +++ K P+VV++ TL+ G ++F+ G+ M EM+ L S LV
Sbjct: 280 EAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLV 339
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GL G+V +A LV + GV P F Y L++ LC N A + D + K G
Sbjct: 340 EGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLC 399
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ + + LI+ R K A + +M+ G+ P +N L+ C G A+ L
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESL 459
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
K L+P +TY L+ GY + + + L +EM +G +P + T+ + + GL
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 483 A 483
A
Sbjct: 520 A 520
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 165/341 (48%), Gaps = 16/341 (4%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFD 207
CP + + ++ F + ++ D L+F + ++ID +PSV YN LING K +
Sbjct: 399 CPN-DVTYSILIDMFCRRGKL-DTALSF--LGEMIDMGLKPSVYPYNSLINGHCKFGDIS 454
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A M+ +++P VVT+ L+ G+C K + AL L+ EM KG P++ +F TL+
Sbjct: 455 AAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLL 514
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G F + V + EM E + + VT ++++G C EG + KA E + + +G++
Sbjct: 515 SGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y L+ LC G A A VD L K + I T L+ G R K EA +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK-----GLDPDGMTYHILV 442
+ M G+ D V + L++ G DR L K GL PD + Y ++
Sbjct: 635 CQDMGLRGVDLDLVCYGVLID-----GSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ KE + + M++EG +P+ TY + ++GL A
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 18/407 (4%)
Query: 78 LKSKLHHHPQFTHYDFHIFAWASTID-SFRHDHTTFLFIVRSLASSYRFSELHSVLNFIS 136
L + LH +F H+ + + I+ R D + ++RSL S ++ +
Sbjct: 195 LSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQME 254
Query: 137 ANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIY 193
A C + P ++ ++ K ++ + + ++K + G+ P V Y
Sbjct: 255 ATGCD-----VNIVP-----YNVLIDGLCKKQKVWEAV----GIKKDLAGKELKPDVVTY 300
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
L+ G K +EF+ L D M+R R P + L+ G + K + AL L + + E
Sbjct: 301 CTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAE 360
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G +PN+ +N LI R FDE + M ++G + VT IL+D C G++
Sbjct: 361 FGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDT 420
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A + + G+ P + Y L+ C G+ A ++ E+ K P+V+ T+L+
Sbjct: 421 ALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMG 480
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G K +A L +M +GI+P TF LL L G DA +L + + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKP 540
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +TY++++ GY E + +NEM+++G +PD +Y + GL
Sbjct: 541 NRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 148/331 (44%), Gaps = 35/331 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LI+ K R FD+A +DRM + + P+ VT++ILI FCR K D AL
Sbjct: 365 PNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G P+V +N+LI G ++ EMI E + VT L+ G C+
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGL------------------------------- 336
+G++ KA L + + +G++P + + L
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544
Query: 337 ----VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+E C EGN A E ++E+ +KG +P + LI GL + EA ++ +
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K + + + LL C G+ +A + +G+D D + Y +L+ G + RK
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L+ EM D G PD Y S +D S
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 6/314 (1%)
Query: 180 MRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
M ++I+ + P+V Y L+ G+ + +KAL Y M + P + TF L+SG R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
A+ LF EM E PN V++N +I G+ E + EMIE G + +
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L+ GLC G+ +A V + + Y GL+ C EG AL V ++
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMG 639
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+G ++ LI+G + + GL+++M G+ PD V + +++ G
Sbjct: 640 LRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A + L +G P+ +TY +++G + E E L ++M +P+ TY ++
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFL 759
Query: 478 D----GLSNARKSV 487
D G+ + +K+V
Sbjct: 760 DILTKGVGDMKKAV 773
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 4/294 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++GF + + ++AL M V D+V + +LI G ++K + LGL +EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMH 674
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ V + ++I F E + MI GC + VT +++GLC G V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 313 KACELVIDFSRRG-VLPKDFDYFGLVEKLC-GEGNAGIALEVVDELWKKGNLPSVIACTT 370
+A E++ R G +P Y ++ L G G+ A+E+ + + K G L +
Sbjct: 735 EA-EILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNM 792
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI G R + EAS L+ +M+ +G+ PD +T+ ++ +LC A L + KG
Sbjct: 793 LIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKG 852
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ PD + Y+ L+ G + L NEML +G P+ T + + S+++
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDSSSK 906
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 151/340 (44%), Gaps = 13/340 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + M+ AFE + ++I+ P Y LI+G + +A F D
Sbjct: 545 YNVMIEGYCEEGNMSK---AFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ + + + + + L+ GFCR K + AL + ++M +G + ++V + LI G +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHK 661
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM + G + V ++D G +A + G +P + Y
Sbjct: 662 DRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVI--AC--TTLIEGLRRLRKGVEASGLMEK 390
++ LC G A + ++ ++P+ + C L +G+ ++K VE +
Sbjct: 722 AVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE----LHN 777
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ +G+L ++ T+N L+ C GR +A L G+ PD +TY ++S R N
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRND 837
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
K+ L N M ++G PD YN+ + G A + + T
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+ + YN+LI GF + ++A RM+ D V PD +T+ +IS CR A+ L
Sbjct: 785 ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIEL 844
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
+ M EKG P+ V++NTLI G + + + EM+ G + ++ T E +
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLI-DG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F + RM + A E + ++I DG P Y +I+ + + KA+ ++
Sbjct: 790 YNMLIRGFCRQGRMEE---ASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWN 846
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
M ++PD V +N LI G C + A L EM +G PN + T I
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 38/328 (11%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K M F+A+ K RPSV +N L+NG++K
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKW-GLRPSVVSFNTLMNGYIKLG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ + M V+PDV T+++LI+G C+ + D A GLF EM + G PN V+F
Sbjct: 186 DLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G + D +++ +M+ G VT L+ GLC +G + +A L+ + SR+
Sbjct: 246 TLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ A E
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFE--------------------------------- 332
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L E+M+KE I D V + L+ LC GR VDA+++ GL PD TY ++++
Sbjct: 333 --LRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNE 390
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ ++ K+ L+ EM G +P + T
Sbjct: 391 FCKKGDVKKASELLREMQRNGRVPCVVT 418
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 180/386 (46%), Gaps = 9/386 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T + RH ++ ++ L + F E S++ + + S +F+ +
Sbjct: 5 TNSTVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + F +K P + NVL +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVL-EHLMKXKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ + LA +F + + G P+VVSFNTL+ G+
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E R+ +A L + G++P
Sbjct: 184 LGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+++ ++ +G P V+ TLI GL + +A L+++M
Sbjct: 244 FTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G+ PD +T+ L++ C G A LR + + D + Y L+ G +E R
Sbjct: 304 RKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAV 363
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMD 478
+ E ++ EML G PD TY M+
Sbjct: 364 DAEKMLREMLRVGLKPDDETYTMIMN 389
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C EG +A V D + K G PSV++ TL+ G +L E
Sbjct: 133 PASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFR 192
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC R +A+ L GL P+G+T+ L+ G+
Sbjct: 193 LKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHC 252
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ R ++ +ML++GF PD+ TYN+ + GL + ++Q R
Sbjct: 253 KNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCK-KGDLKQAR 296
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ +++ K + +D + + M + D+ ++NI+I+ CR +F +AL +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+M + G P+VV+ ++LI GF G R FD +++ +M E+G V ++DG C
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSC 126
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G V A EL R GV Y LV LC G A ++ ++ + +P+VI
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T +I+ + K EA L E+M + + PD T+N L+ LC GR +A ++ L
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TKG PD +TY+ L++G+ + R EG L EM G + D TYN+ + G A
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 33/340 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + NR+ D + M ++ RP V IYN +I+G K + A+ +DRM RD
Sbjct: 87 INGFCQGNRVFDAIDLVSKMEEM-GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 145
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+ D VT+N L++G C + ++ A L R+M + PNV++F +I F E KF E +
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 205
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM + T L++GLC GRV +A +++ +G LP Y L+
Sbjct: 206 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 265
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR----------------------- 377
C ++ E+ ++G + I T+I+G +
Sbjct: 266 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 325
Query: 378 --LRKGV-------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L G+ +A L E M K I D T+N ++ +C +G DA L S
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 385
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
KGL PD ++Y ++SG+ R+ + + + L +M ++G +P
Sbjct: 386 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 5/289 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR-NKKFDLALGLFREM 251
YN++IN +C F AL +M++ +PDVVT + LI+GFC+ N+ FD A+ L +M
Sbjct: 48 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKM 106
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E G P+VV +NT+I G ++ V + M G +VT LV GLC GR
Sbjct: 107 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 166
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A L+ D R ++P + +++ EG A+++ +E+ ++ P V +L
Sbjct: 167 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 226
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL + EA +++ M+ +G LPD VT+N L+ C R + +L + +GL
Sbjct: 227 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 286
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ ++ GY + R + + + M P++ TY+ + GL
Sbjct: 287 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 332
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + +R L M K P V + LINGF + A+ +M
Sbjct: 48 YNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 106
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDVV +N +I G C+ + A+ LF M G + V++N+L+ G ++
Sbjct: 107 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 166
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +M+ + +T ++D EG+ +A +L + +RR V P F Y L
Sbjct: 167 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 226
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++D + KG LP V+ TLI G + ++ E + L +M + G+
Sbjct: 227 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 286
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ D++T+N +++ GR D + + S P+ TY IL+ G R ++
Sbjct: 287 VGDTITYNTIIQGYFQAGR---PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 343
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L M D+ TYN + G+
Sbjct: 344 LFENMQKSEIELDITTYNIVIHGM 367
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 139/276 (50%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ R P +V F+ ++S ++K +DL + LF M G ++ S+N +I +
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F +++ +M++ G E VT L++G C RV A +LV G P Y
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ C G A+E+ D + + G + +L+ GL + +A+ LM M+
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I+P+ +TF +++ G+ +A +L + + +DPD TY+ L++G R E +
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+++ M+ +G +PD+ TYN+ ++G +++ T+
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 276
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + +A R + F M D RP++ Y++L+ G +KAL ++ M
Sbjct: 293 YNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 348
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++ D+ T+NI+I G C+ + A LFR + KG P+VVS+ T+I GF +R++
Sbjct: 349 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 408
Query: 277 DEGVNMAYEMIELG 290
D+ + +M E G
Sbjct: 409 DKSDLLYRKMQEDG 422
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 26/324 (8%)
Query: 161 VNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V+ V+ R+ D E MR L+ P+ +++ +I GF K E D+A +D MV
Sbjct: 425 VDGLVRCGRLEDACKVIEEMRSKGLV---PNEFVFSPVITGFCKLGEVDRASRVWDTMVA 481
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KP+VV ++ +I G R K A LFREM E C PN++++++++RG+F +
Sbjct: 482 AGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQ 541
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ +M+ +GC ++VT +L++GLCN GR A + RG +P Y +++
Sbjct: 542 ALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIK 601
Query: 339 KLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C G L + ++ +G+ P VI L++GL R + A L+ +ML +
Sbjct: 602 GFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACD 661
Query: 398 PDSVTFNCLLED-----------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
PD+VT N L + LC+ R A + ++ K + P+ +
Sbjct: 662 PDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAAVLEM 721
Query: 441 LVSGYTRENRRKEGENLVNEMLDE 464
+V G RRK ++++ DE
Sbjct: 722 VVRGVC---RRKRVWRVIDKCWDE 742
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 22/394 (5%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
I AW D F T+ +V +LA + R + ++++ + DG+ +
Sbjct: 305 IPAWKLVPDKF-----TYSTVVSALADAGRVDDAVALVHEMVV-------DGVVA----A 348
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + A ++ + F M +L PS + YNVL++G + C A+G
Sbjct: 349 EAFNPVLGAMLRTGDVTGAAKLFSFM-QLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMR 407
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM R V P V+T+ ++ G R + + A + EMR KG PN F+ +I GF
Sbjct: 408 RMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLG 467
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D + M+ G + + V ++DGL G++ +A L + +P Y
Sbjct: 468 EVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYS 527
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V G++ AL +++ + G P+ + + LI GL + + +A + + ML
Sbjct: 528 SMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGR 587
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRL---LASTKGLDPDGMTYHILVSGYTRENRR 451
G +PD++ + +++ C G VDA LRL + + PD + Y++L+ G R
Sbjct: 588 GCVPDTIAYTSMIKGFCVSG-MVDAG-LRLFYDMLARGDTHPDVICYNVLLDGLLRAKDL 645
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L+N+MLD+ PD T N+++ + +K
Sbjct: 646 PRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQK 679
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
++ PD T++ ++S + D A+ L EM G +FN ++
Sbjct: 309 KLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGA 367
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M GC S+ T +L+ GL GR A ++ R V+P Y +V+
Sbjct: 368 AKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDG 427
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L G A +V++E+ KG +P+ + +I G +L + AS + + M+ GI P+
Sbjct: 428 LVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPN 487
Query: 400 SVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
V ++ +++ L G+ +A+ L R + K + P+ MTY +V GY + + +
Sbjct: 488 VVLYSAMIDGLARCGKMTEAELLFREMIEAKCV-PNIMTYSSMVRGYFQIGDSSQALSFW 546
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ML G P+ TY+ ++GL N +S
Sbjct: 547 EDMLRIGCTPNAVTYSVLINGLCNVGRS 574
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
++P F Y +V L G A+ +V E+ G + + A ++ + R A+
Sbjct: 310 LVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAA 368
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L M +G P + T+N LL L GR A + + P MTY +V G
Sbjct: 369 KLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGL 428
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R R ++ ++ EM +G +P+ ++ + G + R +R
Sbjct: 429 VRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASR 474
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 154/304 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y LI G + +A+G +++M+ +KPDV TFNIL+ G C+ + A +
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G + N+V++N+L+ G+F ++ ++ + M G + I+++GLC
Sbjct: 297 LAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCK 356
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V +A L + + + P Y L++ L G A ++V+E+ +G VI
Sbjct: 357 TKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVIT 416
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++L++ L + + +A L+ K+ +GI P+ T+ L++ LC GR DA +
Sbjct: 417 YSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLL 476
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KG D Y+++V+G +E E +LV++M D G IPD TY + + L K+
Sbjct: 477 IKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKND 536
Query: 488 RQTR 491
+ +
Sbjct: 537 KAVK 540
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 155/317 (48%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ ++D + +F + + + + +N +++ VK F A+ F +M +++PD+ T
Sbjct: 42 DNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFT 101
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNILI+ FC + A + ++ + G +P+ V+ TLI+G K E ++ ++I
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVI 161
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G V+ L++GLC G A +++ V P Y +++ LC +
Sbjct: 162 AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A ++ E+ K P V+ TTLI G + + EA GL +ML + I PD TFN L+
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G A + + +G+D + +TY+ L+ GY + + + N M G
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341
Query: 468 PDLATYNSYMDGLSNAR 484
PD+ +Y+ ++GL +
Sbjct: 342 PDVQSYSIMINGLCKTK 358
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 4/308 (1%)
Query: 176 AFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +RK IDG +P+V +YN +I+ K + A M+ R+ PDVVT+ LI
Sbjct: 188 ALQVLRK-IDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G + A+GLF +M K P+V +FN L+ G E + + N+ MI+ G +
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L+DG + KA + +RRGV P Y ++ LC A+ +
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ K P+ + +LI+GL + + +A L+ +M G D +T++ LL+ LC
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCK 426
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L +G+ P+ TY ILV G + R K+ + + ++L +G+ D+
Sbjct: 427 NHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM 486
Query: 473 YNSYMDGL 480
YN ++GL
Sbjct: 487 YNVMVNGL 494
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R+ + + F M L + +P V +N+L++G K E KA M++ V ++VT+
Sbjct: 254 RLKEAVGLFNQML-LKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTY 312
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L+ G+ K+ + A +F M +G P+V S++ +I G + DE VN+ EM
Sbjct: 313 NSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHS 372
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
++VT L+DGL GR+ A +LV + RG Y L++ LC
Sbjct: 373 KSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDK 432
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A+ ++ ++ +G P++ T L++GL + + +A + + +L +G D +N ++
Sbjct: 433 AITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVN 492
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LC G +A L G PD +TY LV ++ + L+ EM+ +G
Sbjct: 493 GLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P+++ + +N K +++ + F+ M P+ YN LI+G +K A
Sbjct: 342 PDVQS-YSIMINGLCKTKMVDEAVNLFKEMHSK-SMAPNTVTYNSLIDGLLKYGRISDAW 399
Query: 211 GFYDRMVRDRVKP-DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M +R +P DV+T++ L+ C+N + D A+ L +++++G PN+ ++ L+ G
Sbjct: 400 DLVNEM-HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDG 458
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + +++ G ++V+GLC EG +A LV G +P
Sbjct: 459 LCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPD 518
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
Y LV L A++++ E+ +G+
Sbjct: 519 AVTYETLVRALFENDKNDKAVKLLREMIVQGS 550
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y +L++G K A Y ++ DV +N++++G C+ FD AL
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
L +M + GC P+ V++ TL+R F K D+ V + EMI G S
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGS 554
>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
Length = 382
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 3/289 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ + ++LI+G K + L + M + D V + +L+SG + K+ D AL +
Sbjct: 11 PNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKEKRLDQALAI 70
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMR+ GC PNVV++N+LI G + D + M + C VT L+DGL
Sbjct: 71 LHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECS-PLVTYNTLLDGLFW 129
Query: 308 EGRV--LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G++ A EL+ RG P LV+ LC E A EV+ E+ G +P++
Sbjct: 130 TGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNL 189
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +L+ GL R R+ +A LM M G P+ VT+ L++ LC VGR DA L +
Sbjct: 190 VTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEV 249
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ G D D +TY L+ G + R E L+ M+ G TYN
Sbjct: 250 MTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRMGTPSSTLTYN 298
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 3/270 (1%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M + + P++ +ILI G C+ K+ L FR M+ G + V + L+ G +
Sbjct: 1 FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E++ D+ + + +EM + GCE + VT L+DGLC +A EL P
Sbjct: 61 EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPL-VT 119
Query: 333 YFGLVEKL--CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ L G+ + +A+E+++ + +G P VI T L++GL + K A ++ +
Sbjct: 120 YNTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCE 179
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
ML G +P+ VT LL LC R DA L + +G P+ +TY L+ G + R
Sbjct: 180 MLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 239
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K+ NL M +G D+ TY++ +DGL
Sbjct: 240 VKDAGNLYEVMTGDGCDADVVTYSTLIDGL 269
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
C IL+DGLC R + G++ Y L+ L E AL ++ E+
Sbjct: 16 CSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKEKRLDQALAILHEMR 75
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G P+V+ +LI+GL + + A L E M P VT+N LL+ L G+
Sbjct: 76 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTYNTLLDGLFWTGKLE 134
Query: 418 DADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A + LL S K G PD +T ILV G +E++ ++ EMLD G +P+L T S
Sbjct: 135 SAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKS 194
Query: 476 YMDGLSNARK 485
+ GL AR+
Sbjct: 195 LLHGLCRARR 204
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 179/413 (43%), Gaps = 50/413 (12%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D F + L +FSE+ + ++ S ++ E + V+ A
Sbjct: 18 DSQAFTLLATKLFRRSKFSEVVRLFTLLA------SRGVVYG----ETTYKLVVDGLCGA 67
Query: 168 NRMNDGLLAFEAMRKLID-GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
N A E +R+L P+V IYN +I G + A ++MV + + P+V
Sbjct: 68 GMANQ---ALELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ IL++G CR+ K LA +F+EM+ GC PN +++ TLI+ + DE + + E
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ 184
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV--------- 337
L +TC +V GLC R+ A + + + + GV P + Y LV
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL 244
Query: 338 ---------------------------EKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ LC G A + V+EL + G +P V+ +
Sbjct: 245 DRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSM 304
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI R + + L+E M + G+ PD VT++ L+ LC + DA RL L G
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY+ ++ G + + E + ML PD+ TY+ M+GLS A
Sbjct: 365 SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA 417
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 39/342 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N ++N+ F+ M++ +G +P+ Y LI + E D+AL
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKR--NGCKPNPITYGTLIQHLSRAGEIDEALRVMIE 183
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF----- 270
+ DV+T ++ G C+ + D AL EMR+ G PN V+++ L+ GF
Sbjct: 184 QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGE 243
Query: 271 -------FGERKFDEGVNM---AY---------------------EMIELGCEFSSVTCE 299
F E K +G ++ AY E+ + G VT
Sbjct: 244 LDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYS 303
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+L++ G+ + EL+ D R GV P Y L+ LC E A +++ +
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA 363
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G+ P+V+ ++++GL + K E + E MLK PD VT++ ++ L G A
Sbjct: 364 GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+L L + PD Y ++++ R + +E + + M
Sbjct: 424 VKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM 465
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 3/234 (1%)
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L R + E G + +F L F KF E V + + G + T +++VDGLC
Sbjct: 6 LERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLC 65
Query: 307 NEGRVLKACELVIDFSRRGVL-PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G +A ELV + S GV P F Y G++ LC A +V++++ ++ +P+V
Sbjct: 66 GAGMANQALELVRELS--GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNV 123
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
T L+ GL R K A + ++M + G P+ +T+ L++ L G +A R+ +
Sbjct: 124 FTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIE 183
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L D +T +V G + +R + + EM G P+ TY++ + G
Sbjct: 184 QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG 237
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L +F + +L + A P P + ++ ++ K+
Sbjct: 333 DVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP---------PNVV-TYNSVMDGLCKS 382
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+M++ +E M K P V Y++++NG K D A+ ++ + R PD
Sbjct: 383 GKMDEVHRVYEMMLK-SRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAA 441
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
++++I+ CR K + A G++ M N+
Sbjct: 442 YSMVITSLCRAGKLEEACGMYHGMEVTVAGDNI 474
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A T L L R K E L + G++ T+ +++ LC G A L L+
Sbjct: 21 AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA--LELVR 78
Query: 427 STKGL-DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ P Y+ +++G R +R + ++ +M++E +P++ TY ++GL + K
Sbjct: 79 ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138
Query: 486 S 486
+
Sbjct: 139 T 139
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 37/369 (10%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G P+M ++ V A R +GLL M++L RPS Y +++ + R+
Sbjct: 247 GEMDQPDMH-MYAALVKGLCNAERGEEGLLMLRRMKEL-GWRPSTRAYAAVVDFRCRERK 304
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+A M + P VVT +I+ +C+ + AL + M+ +GC PNV ++N
Sbjct: 305 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 364
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L++GF E K + + + +M G +VT +L+ G C +G + A L+ G
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
++ + Y L+ LC +G A + D L +G P+ + +LI GL + K A
Sbjct: 425 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAW 484
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCD----------VGRTVDAD--------------- 420
+EKM+ G PD+ T++ +E LC +G + D
Sbjct: 485 KFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKL 544
Query: 421 ----RLRLLAST------KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
L+A T G +PD +TY + Y E R E EN++ EM G D
Sbjct: 545 LKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDT 604
Query: 471 ATYNSYMDG 479
YN+ MDG
Sbjct: 605 MAYNTLMDG 613
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 156/345 (45%), Gaps = 31/345 (8%)
Query: 173 GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L F M + P+ YN +I + + +AL + MVR +PD TFN LI
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF------------FGE------- 273
G+CR + D+A LF +M +G +VVS+ TLI G FGE
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMH 255
Query: 274 ------------RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
+ +EG+ M M ELG S+ +VD C E + +A E++ +
Sbjct: 256 MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM 315
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+G+ P ++ C EG AL V++ + +G P+V L++G K
Sbjct: 316 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 375
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A L+ KM G+ PD+VT+N L+ C G A RL L GL D TY+ L
Sbjct: 376 HKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL 435
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ ++ R + +L + + G P+ T+NS ++GL + K+
Sbjct: 436 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 1/313 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+NA+ K RM+D L E M KL +P+V YN L+ GF + KA+ ++M
Sbjct: 331 INAYCKEGRMSDALRVLELM-KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD VT+N+LI G C + + A L R M G + ++N LI + + D+
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ + G + ++VT L++GLC G+ A + + G P + Y +E L
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + L + E+ +K PS + T +I L + R + +M+ G PD
Sbjct: 510 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 569
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ + C GR +A+ + + S G+ D M Y+ L+ G+ + +++ +
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629
Query: 461 MLDEGFIPDLATY 473
M +P+ TY
Sbjct: 630 MTSVASVPNQFTY 642
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 148/332 (44%), Gaps = 33/332 (9%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP +N LI G+ + + D A +D+M DVV++ LI G C + D A+
Sbjct: 185 RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVE 244
Query: 247 LF-------------------------------REMREKGCNPNVVSFNTLIRGFFGERK 275
LF R M+E G P+ ++ ++ ERK
Sbjct: 245 LFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 304
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E M EM E G VTC +++ C EGR+ A ++ RG P + Y
Sbjct: 305 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 364
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKE 394
LV+ C EG A+ +++++ G P + LI G + + +E++ L+ M +
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG-QCIDGHIESAFRLLRLMEGD 423
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++ D T+N L+ LC GRT A L T+G+ P+ +T++ L++G + +
Sbjct: 424 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 483
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +M+ G PD TY+S+++ L + S
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 515
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 150/344 (43%), Gaps = 18/344 (5%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ +NA K R + F+++ +P+ +N LING K + D A F
Sbjct: 429 QYTYNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFL 487
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++MV PD T++ I C+ K L EM +K P+ V++ +I E
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R + EM+ GC VT + C EGR+ +A ++++ S+ GV Y
Sbjct: 548 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 607
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR-------------- 379
L++ G A+ ++ ++ ++P+ L+ L R+R
Sbjct: 608 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 667
Query: 380 KGVEAS---GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
K +E + GL + M K LP+S T++ +LE + GRT +A L L + +
Sbjct: 668 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 727
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y LV+ + + R + LV M+ GFIP L +Y + GL
Sbjct: 728 IYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 771
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 152/343 (44%), Gaps = 22/343 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N K+ + + +A++ + K++ P Y+ I K + + L F
Sbjct: 467 FNSLINGLCKSGKAD---IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 523
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ VKP V + I+I + + + L + EM GCNP+VV++ T +R + E
Sbjct: 524 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 583
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E N+ EM + G ++ L+DG + G+ A ++ + +P F YF
Sbjct: 584 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 643
Query: 335 ---------GLVEKLCGEGNAGI--ALEVVD-----ELWKKGN-LPSVIACTTLIEGLRR 377
LVE + AG+ A+E+ D ++ KK LP+ ++++EG
Sbjct: 644 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 703
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA+ L+ M ++ I + + L+ C R +DA L G P M+
Sbjct: 704 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMS 763
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y L+SG E + + + + + + PD + +DGL
Sbjct: 764 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 806
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F +R L+ R + + G K E G +D M ++ P+ T++ ++ GF
Sbjct: 643 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 702
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + + A L M+E + N + L+ F +++ + + MI+ G +
Sbjct: 703 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLM 762
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+ + L+ GL EG+ KA E+ ++ + P + + +++ L +G++ I+ E++ L
Sbjct: 763 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIML 822
Query: 357 WKKGNLPSVIACTTLIEGL 375
+ PS L E L
Sbjct: 823 ERMNCRPSHQTYAMLTEEL 841
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ ++
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQIS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A ++ DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G+ P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
GN + + + G P V + LI GL + K +A+ L ++ML G++P+ VTF
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L +EM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 464 EGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 305 KGLKPDKITYTTLIDG 320
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + K N+ + + + M L S + +LI+ F +C AL +M
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS-FTILIHCFCRCSRLSLALALLGKM 140
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +P +VT L++GFC+ +F A+ L M G PNVV +NT+I G R
Sbjct: 141 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + Y M + G +VT L+ GL N GR A L+ D +R + P + L
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EGN A + E+ ++ +P+V +LI G +A + + M+ +G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+ C R D +L + +GL D TY+ L+ GY + + +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ N M+D G PD+ TYN +D L N K
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS+ L+NGF + F +A+ D M P+VV +N +I+G C+N+ + AL
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M +KG + V++NTLI G ++ + + +M++ + + + L+D
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG +L+A L + RR V+P F Y L+ C G G A + D + KG P V+
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI G + ++ + L +M +G++ D+ T+N L+ C G+ A ++
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ PD +TY+IL+ + ++ +V ++ D+ TYN + GL K
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 42/352 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+N F + NR + + ++M DG P+V IYN +ING K R+ + AL + M
Sbjct: 156 LNGFCQGNRFQEAVSLVDSM----DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ ++ D VT+N LISG + ++ A L R+M ++ +PNV+ F LI F E
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 278 EGVNMAYEMIEL-----------------------------------GCEFSSVTCEILV 302
E N+ EMI GC VT L+
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C RV +L + + +G++ F Y L+ C G +A +V + + G
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P ++ L++ L K +A ++E + K + D +T+N +++ LC + +A L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ KG+ PD + Y ++SG R+ ++E + L M ++GF+P Y+
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 157 FHFAVNAFVK-ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ FVK N + L E +R+ + P+V YN LINGF A +D
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSV--VPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV PDVVT+N LI+GFC++K+ + + LF EM +G + ++NTLI G+ K
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M++ G VT IL+D LCN G++ KA +V D + + Y
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC A + L +KG P IA T+I GL R EA L +M ++G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 396 ILPDSVTFNCLLED 409
+P ++ L D
Sbjct: 495 FMPSERIYDETLRD 508
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%)
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
C +FD A + M++ R P +V F +++ + KFD+ + L+ +M G + ++ S
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
F LI F + + + +M++LG S VT L++G C R +A LV
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G +P Y ++ LC + ALEV + KKG + TLI GL +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ L+ M+K I P+ + F L++ G ++A L + + P+ TY+ L+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ + + + + M+ +G PD+ TYN+ + G +++
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++ L+ E ++K + + YN++I G + + +A + +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQK-SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
R VKPD + + +ISG CR A L R M+E G P+ ++ +R +
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+L+ K R + +A+ D M + P VT+N+++ G CR D A L
Sbjct: 185 PDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYAREL 244
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ GC PN V++NT+++G ++++ + EM C S T +++ LC
Sbjct: 245 LNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQ 304
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG +A L+ S+ Y +V LC +G+ AL ++ + G P++
Sbjct: 305 EGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFT 364
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++GL + +A LM KM + LPD +TFN ++ LC G T+ A +
Sbjct: 365 YNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMP 424
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
KG P+ +TY ++ G + + ++ L+NEM +GF P++
Sbjct: 425 EKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI 467
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 1/282 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + +V+I+ + F +A+ ++M + ++VT+N ++SG C D AL L
Sbjct: 290 PSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYL 349
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M+ GC PN+ ++N L++G ++++ ++ +M + C +T ++ LC
Sbjct: 350 LSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQ 409
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G ++A E+ +G P Y ++E L G +LE+++E+ KG P I
Sbjct: 410 KGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-IN 468
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L E L K VEA ++ K+ GI P +V +N +L LC G+T A +
Sbjct: 469 YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMV 528
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+ G PD TY IL+ G E KE L++ + I D
Sbjct: 529 SDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVD 570
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 151/308 (49%), Gaps = 7/308 (2%)
Query: 181 RKLIDGRPSVSI------YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
R+L++ PS YN ++ G ++ M + P T +++IS
Sbjct: 242 RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISS 301
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C+ F A+ L +M + C N+V++N ++ G + D + + M GC+ +
Sbjct: 302 LCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPN 361
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
T ILV GLCN R A +L+ S+ LP + ++ LC +G A+EV
Sbjct: 362 IFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFK 421
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ +KG P+ + +++IEGL + K ++ L+ +M +G P+ + ++ L E L +
Sbjct: 422 QMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEED 480
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ V+A ++ G+ P + Y+ ++ G R + + ++++ M+ +G +PD +TY+
Sbjct: 481 KLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYS 540
Query: 475 SYMDGLSN 482
+ GL++
Sbjct: 541 ILIQGLAH 548
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 3/312 (0%)
Query: 177 FEAMRKLIDGRP---SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ R+++DG P S YN L++ + AL D M+ PDVVT+NIL+
Sbjct: 136 LDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLE 195
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ + + A+ L MR +GC P V++N ++ G E D + + GC
Sbjct: 196 AACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTP 255
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
++V ++ GL GR EL+ + P + ++ LC EG A+ ++
Sbjct: 256 NTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLL 315
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+++ K +++ ++ GL A L+ M +G P+ T+N L++ LC+
Sbjct: 316 EKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNA 375
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R DA+ L S PD +T++ ++ ++ + + +M ++G P+ TY
Sbjct: 376 ERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTY 435
Query: 474 NSYMDGLSNARK 485
+S ++GL+ K
Sbjct: 436 SSVIEGLAKTGK 447
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 19/362 (5%)
Query: 117 RSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLA 176
R L+S EL + L + ++ CP P++ + + V + R D
Sbjct: 61 RRLSSLVHRGELDAALRVVESSLCP---------PDVA-LANRLVRDLCRRGRPADAARV 110
Query: 177 FEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
EA G + ++ Y+ L +G+ + D+A D M V P +N L+
Sbjct: 111 VEAC-----GSAATAVTYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHAL 162
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C + AL L M +GC P+VV++N L+ R + + + + M GC ++
Sbjct: 163 CVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTN 222
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
VT +++DG+C EG V A EL+ G P +Y +++ L G E++ E
Sbjct: 223 VTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAE 282
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
++ + PS + +I L + A L+EKM K + VT+N ++ LC+ G
Sbjct: 283 MFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGH 342
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L T G P+ TY+ILV G R ++ E+L+ +M +PD+ T+N+
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNT 402
Query: 476 YM 477
+
Sbjct: 403 II 404
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+CP E +++ + + E M K D ++ YN +++G + D
Sbjct: 287 NCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKH-DCTANIVTYNAVVSGLCEQGHVDG 345
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL M D KP++ T+NIL+ G C ++++ A L +M + C P++++FNT+I
Sbjct: 346 ALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTII- 404
Query: 269 GFFGERKFD-EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF ++ + V + +M E GC +SVT +++GL G++ ++ EL+ + +G
Sbjct: 405 GFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFN 464
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + +Y L E L E A+++V +L G P + T++ GL R K +A +
Sbjct: 465 P-EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDI 523
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ M+ +G +PD T++ L++ L G +A L S++ + D +
Sbjct: 524 LSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNL 572
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 120/250 (48%), Gaps = 6/250 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V+ + ++ L M+ DG +P++ YN+L+ G ++ A +
Sbjct: 330 YNAVVSGLCEQGHVDGALYLLSNMQT--DGCKPNIFTYNILVKGLCNAERWEDAEDLMAK 387
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + PD++TFN +I C+ A+ +F++M EKGC PN V+++++I G K
Sbjct: 388 MSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGK 447
Query: 276 FDEGVNMAYEMIELGCEFS-SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ + + EM G F+ + +L + L E ++++A ++V G+ P+ Y
Sbjct: 448 MEQSLELLNEMGSKG--FNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYN 505
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC G A++++ + G +P + LI+GL EA L+ +
Sbjct: 506 TILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR 565
Query: 395 GILPDSVTFN 404
++ D++ N
Sbjct: 566 DVIVDNLIKN 575
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 163/343 (47%), Gaps = 39/343 (11%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D A + ++K IDGR P+V +Y+ +I+ K + +A G + M + DV
Sbjct: 176 KIGDTRAAIKLLQK-IDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE------- 278
VT++ LI GFC K A+GL EM K NPNV ++N L+ E K E
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 279 ------------------GVNMAYEMIELGCEFSSV----------TCEILVDGLCNEGR 310
G + YE+ + F+++ T IL++G C
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L + ++ ++P Y L++ LC G +++DE+ +G +VI ++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+GL + A L KM +GI P++ TF LL+ LC GR DA + TKG
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ TY++++ G+ ++ +E ++++M D G IPD T+
Sbjct: 475 YHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 144/293 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +++ F K + + A+ R+ ++PD++T NILI+ FC + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ ++G P+ V+ NTLI+G + + + ++ +++ G + + V+ L++G+C
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A +L+ R P Y +++ LC A + E+ KG V+
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI G K EA GL+ +M+ + I P+ T+N L++ LC G+ +A + +
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ PD +TY L+ GY K+ +++ N M G PD+ TY ++G
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 5/253 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+A K ++ + M K +P V Y+ L++G+ E KA ++ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACV-KPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDV T+ ILI+GFC+NK D AL LF+EM +K P +V++++LI G +
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ EM + G + +T L+DGLC G + +A L +G+ P F + L
Sbjct: 391 PYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTIL 450
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKE 394
++ LC G A EV +L KG +V +I+G ++G+ EA ++ KM
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDG--HCKQGLLEEALTMLSKMEDN 508
Query: 395 GILPDSVTFNCLL 407
G +PD+VTF ++
Sbjct: 509 GCIPDAVTFEIII 521
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 142/276 (51%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ ++RM+ R P ++ FN ++ F + K + A+ L + KG P++++
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI F + G ++ ++++ G +VT L+ GLC +G+V KA
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G Y L+ +C G+ A++++ ++ + P+V+ +T+I+ L + + E
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL +M +GI D VT++ L+ C G+ +A L K ++P+ TY+ILV
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E + KE ++++ ML PD+ TY++ MDG
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 135/288 (46%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K + A+ ++ KP+VV ++ +I C+ + A GLF EM
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMT 226
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG + +VV+++TLI GF E K E + + EM+ + T ILVD LC EG+V
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ + V P Y L++ A V + + G P V T LI
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + + EA L ++M ++ ++P VT++ L++ LC GR L +G
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQP 406
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +TY L+ G + L N+M D+G P+ T+ +DGL
Sbjct: 407 ANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P N LI G + KAL F+D+++ + + V++ LI+G C+ A+ L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 186
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+++ + PNVV ++T+I + E + EM G VT L+ G C
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ +A L+ + + + P + Y LV+ LC EG A V+ + K P VI
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TL++G + + +A + M G+ PD T+ L+ C +A L
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + P +TY L+ G + R +L++EM D G ++ TY+S +DGL
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 133/294 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + N+LIN F + ++++ PD VT N LI G C + AL
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ +G N VS+ TLI G + + ++ + + V ++D LC
Sbjct: 151 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC 210
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V +A L + + +G+ Y L+ C EG A+ +++E+ K P+V
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++ L + K EA ++ MLK + PD +T++ L++ V A +
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
S G+ PD TY IL++G+ + E NL EM + +P + TY+S +DGL
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+L++ K + +A M++ VKPDV+T++ L+ G+ + A +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M G P+V ++ LI GF + DE +N+ EM + VT L+DGLC
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +L+ + RG Y L++ LC G+ A+ + +++ +G P+
Sbjct: 387 SGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFT 446
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L++GL + + +A + + +L +G + T+N +++ C G +A +
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506
Query: 428 TKGLDPDGMTYHILV 442
G PD +T+ I++
Sbjct: 507 DNGCIPDAVTFEIII 521
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 133/266 (50%), Gaps = 2/266 (0%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ + A+ R+ ++PD+ T NILI+ FC + + ++ ++G +P+ ++F
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
TLI G + + ++ ++ +++ G + + V+ L++G+C G A +L+
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
R P Y +++ LC A + E+ KG V+ TLI G + K E
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHIL 441
A GL+ KM+ + I P+ T+N L++ LC G+ + + L +L+ + G + +T+ I+
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFI 467
+S ++ + E L++EM+ G +
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARGLL 1205
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
F AM L+ P V Y +LINGF K + D+AL + M + + P +VT++ LI G
Sbjct: 326 VFNAM-SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C++ + L EM ++G NV+++++LI G D + + +M + G ++
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNT 444
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
T IL+DGLC GR+ A E+ D +G + Y +++ C +G AL ++ +
Sbjct: 445 FTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSK 504
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-----KEGILPDSVTFNCLLED 409
+ G +P + +I L + + G +K+ K+G P S+TF C D
Sbjct: 505 MEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETP-SITFKCHSHD 562
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D A + +RK IDGR P V +YN +I+ K + KA G + M + DV
Sbjct: 1043 KIGDTRAAIKLLRK-IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADV 1101
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK--FDEGVNMA 283
VT+N LI GFC K A+GL +M K NPNV ++N L+ E K DE ++M
Sbjct: 1102 VTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSML 1161
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+M + GC+ ++VT EI++ L + K +L+ + RG+L
Sbjct: 1162 SKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%)
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + V++++ + G + T IL++ C+ G++ ++ +RG P +
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC +G AL D+L +G + ++ TLI G+ ++ A L+ K+
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
PD V +N +++ LC A L + KG+ D +TY+ L+ G+ + KE
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+N+M+ + P++ TYN +D L K +
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDL 1153
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + LING + +KAL F+D+++ + + V++ LI+G C+ A+ L
Sbjct: 994 PDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 1053
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R++ + P+VV +NT+I + + + +EM G VT L+ G C
Sbjct: 1054 LRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI--ALEVVDELWKKGNLPSV 365
G++ +A L+ + + P Y LV+ LC EG + +L ++ ++ G +
Sbjct: 1114 VGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ +I L + + L+ +M+ G+L
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 194/432 (44%), Gaps = 46/432 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + E S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAT 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
+ I+ + + A++++ + D + + R+ P + VL +K
Sbjct: 61 ILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL-EHLMK 119
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ F GFY+ ++ + FNIL+ FC++ +A +F + + G P+VVS
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ G+ +EG + M+ G + T +L++GLC E ++ A EL +
Sbjct: 180 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+G++P + L++ C G +A+E+ ++ + LP +I TLI GL +
Sbjct: 240 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299
Query: 383 EASGLMEKMLKEGILPDS-----------------------------------VTFNCLL 407
+A L+++M +G+ PD V + L+
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC GR+VDA+++ + GL PD TY ++++ + ++ +G L+ EM +G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 468 PDLATYNSYMDG 479
P + TYN M+G
Sbjct: 420 PSVVTYNVLMNG 431
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 268 EIYKQMLSQCLLPDLITYNTLIYGL 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 109 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 168
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 227
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 152/296 (51%), Gaps = 1/296 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
I L+ GF + AL +D M R+ P+ V+++ILI G C + + A GL +
Sbjct: 232 IVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ 291
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M EKGC P+ ++ LI+ D+ N+ EMI GC+ + T +L+DGLC +G+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGK 351
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A + + G+ P Y L+ C +G A E++ + K+ P+V
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+EGL R+ K +A L+++ML G+ PD V++N L++ LC G A +L ++
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+PD +T+ +++ + ++ + + ML +G D T + +DG+ N K+
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT 527
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 161/347 (46%), Gaps = 4/347 (1%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
DGIF P + ++ +N + K R+ M K +P+V +N L+ G +
Sbjct: 364 KDGIF--PSV-ITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRV 419
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ KA+ RM+ + + PD+V++N+LI G CR ++A L M P+ ++F
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTF 479
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
+I F + K D M+ G VT L+DG+CN G+ A ++ +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVK 539
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+L +++ L L ++ ++ K G +PSV+ TTL++GL R
Sbjct: 540 MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISG 599
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
+ ++E M G LP+ + ++ LC GR +A++L G+ P+ +TY ++V
Sbjct: 600 SFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
GY + V M++ G+ + Y+S + G ++K +R+T
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRET 706
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 160/360 (44%), Gaps = 49/360 (13%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F + + D L F+ M + P+ Y++LI+G + ++A G D+M +
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P T+ +LI C D A LF EM +GC PNV ++ LI G + K +E +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+M++ G S +T L++G C +GRV+ A EL+ +R P + L+E LC
Sbjct: 359 CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR------------------------- 377
G A+ ++ + G P +++ LI+GL R
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT 478
Query: 378 ----------LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-------D 420
K AS + ML++GI D VT L++ +C+VG+T DA
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLV 538
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++R+L + L+ +++ ++ + KE ++ ++ G +P + TY + +DGL
Sbjct: 539 KMRMLTTPHSLN-------VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 123/297 (41%), Gaps = 39/297 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV Y L++G ++ + + + M P+V + I+I+G C+ + + A L
Sbjct: 579 PSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M++ G +PN V++ +++G+ K D + M+E G E + L+ G
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFV- 697
Query: 308 EGRVLKACELVIDFSRRGVLPKD----FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
S++G+ D + +VE+L G +G+ + +V L K+G
Sbjct: 698 -------------LSQKGIRETDPECIKELISVVEQL-GGSTSGLCIFLVTRLCKEGRTD 743
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
E++GL++ +LK G+ + + ++E C + L
Sbjct: 744 -------------------ESNGLVQTILKSGVFLEK-AIDIIMESYCSKKKHTKCVELI 783
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L G P ++ +++ G +E + LV E+L + + + Y++ L
Sbjct: 784 TLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECL 840
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
DY +V LC G A + ++ K G L T+L+ G R +A + +
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255
Query: 391 MLKEGIL-PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M +EG P+SV+++ L+ LC+VGR +A L+ KG P TY +L+
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ NL +EM+ G P++ TY +DGL
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGL 346
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 2/353 (0%)
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
N + A+ S F C ++ +++ + R++D + FE + P V
Sbjct: 194 NLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWS 253
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NV+I G + + KAL +RM PD VT NIL+ G CR + + R ++
Sbjct: 254 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 313
Query: 253 EKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G C PNVV+F ++I G+ K ++ + + +M+ G ++VT +L++G G +
Sbjct: 314 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 373
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A E+ +R P + L++ C G AL + ++ + P+V + +
Sbjct: 374 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 433
Query: 372 IEGLRRLRKGVEASGLMEKM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
I L + + EA GL+ ++ L+ I P + +N +++ LC G+ +A+ +R KG
Sbjct: 434 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 493
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD TY IL+ GY ++R E +EM++ G PD T N ++ L A
Sbjct: 494 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 546
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 7/284 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + V+ + N ++ G E +R+L DG P+V + +I+G+ K
Sbjct: 280 FGCSPDTVTHNILVDGLCRTNEVSRG---HEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ + A+ Y+ MV + P+ VT+N+LI+G+ + A+ ++++M C P+VV+F+
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 396
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + D+ + + +M + + + T I++ LC + R +A L+ + + R
Sbjct: 397 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 456
Query: 325 -GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A + + +KG P T LI G + E
Sbjct: 457 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 516
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
A +M++ G PDS+T NC + L G + D + LAS
Sbjct: 517 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 560
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 4/286 (1%)
Query: 204 REFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
R+ D AL +D+M PD + L+S D + L + E GC +
Sbjct: 159 RQAD-ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYA 217
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDF 321
+N L+ G + + V + I+ V + +++ G+C G+V KA ELV
Sbjct: 218 YNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM 277
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRK 380
+ G P + LV+ LC EV+ L + G +P+V+ T++I G + K
Sbjct: 278 NEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 337
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A + M+ GI+P++VT+N L+ VG A + + PD +T+
Sbjct: 338 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSS 397
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+ GY R + + + ++M P++ T++ + L +S
Sbjct: 398 LIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS 443
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEA 384
+ P ++ LC G AL++ D++ G P + L+ +
Sbjct: 140 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDAS 199
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVS 443
+ L+ K + G ++ +N L+ L GR D L + PD ++++++
Sbjct: 200 ATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIK 259
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G R + ++ LV M + G PD T+N +DGL + R
Sbjct: 260 GVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSR 304
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+ +G PD TY + +DG
Sbjct: 303 IMKGLXPDKITYTTLIDG 320
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 3/306 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF R ++D P V ++VLI+G K + +A+G + ++ + PDV T+ LIS
Sbjct: 601 AFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLIS 660
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ A L +M +KG NPN+V++N LI G + + + + E G
Sbjct: 661 NLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLAR 720
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+SVT ++ G C + +A +L GV P F Y L++ C GN AL +
Sbjct: 721 NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLF 780
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ ++G + S A LI+G +L K +EA L+E M+ I P+ VT+ L+E C V
Sbjct: 781 LGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTV 839
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G +A++L + + + P+ +TY L+ GY R RR E +L +EM+ G PD +
Sbjct: 840 GNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAW 899
Query: 474 NSYMDG 479
+ +D
Sbjct: 900 SVMVDA 905
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 157/359 (43%), Gaps = 17/359 (4%)
Query: 142 CSNDGIFSCPEMERIFHFAV---------NAFVKANRMN------DGLLAFEAMRKLIDG 186
C +G + ME+ + + NA++ +N D A E +++I
Sbjct: 412 CLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISW 471
Query: 187 --RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+P++ IY ++ G VK F++A+ M + PDV +N +I GFC+ K +
Sbjct: 472 GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEG 531
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
EM KG PNV ++ I G+ + EM++ G + V C L+DG
Sbjct: 532 KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDG 591
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +G KA +GVLP + L+ L G A+ V EL KG +P
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V T+LI L + A L + M K+GI P+ VT+N L+ LC +G A L
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD 711
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KGL + +TY +++GY + E L + M G PD Y + +DG A
Sbjct: 712 GIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKA 770
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 153/330 (46%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++ F + R +G + M + +P Y LINGFVK + A +
Sbjct: 304 IYATLIDGFCRQKRSTEGKSMLDEMYTM-GLKPDHVAYTALINGFVKQSDIGGAFQVKEE 362
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++K + T+ LI G C+ + A LF EM G P++ ++N LI G++ +
Sbjct: 363 MFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQN 422
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + E+ + ++ C +V+GLC+ G + +A EL + G+ P Y
Sbjct: 423 MEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTT 482
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+V+ L EG A++++ + +G P V T+I G + K E + +M+ +G
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ T+ + C G A+R + G+ P+ + L+ GY ++ +
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAF 602
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
MLD+G +PD+ T++ + GLS K
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 3/324 (0%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+NA+ + ++ +G + F+ K P++ Y+V+I G + + D+AL M
Sbjct: 239 INAYCRVGKVEEGKHVLFDMEEK--GCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANK 296
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD + LI GFCR K+ + EM G P+ V++ LI GF +
Sbjct: 297 GLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGA 356
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM + ++ T L+ GLC G + KA +L + + G+ P Y L+E
Sbjct: 357 FQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEG 416
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
N A E++ E+ K+ + C ++ GL A+ L ++M+ G+ P+
Sbjct: 417 YYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPN 476
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V + +++ L GR +A ++ + +GL PD Y+ ++ G+ + + +EG++ +
Sbjct: 477 IVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLV 536
Query: 460 EMLDEGFIPDLATYNSYMDGLSNA 483
EM+ +G P++ TY +++ G A
Sbjct: 537 EMIAKGLKPNVYTYGAFIHGYCRA 560
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + YN LI G+ K + +KA + ++ + + +++G C A
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM G PN+V + T+++G E +F+E + + M + G ++ G C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ + +++ +G+ P + Y + C G A E+ G P+ +
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDV 583
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
CT LI+G + +A ML +G+LPD T + L+ L G+ +A +
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL PD TY L+S +E K L ++M +G P++ TYN+ ++GL
Sbjct: 644 LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 193/467 (41%), Gaps = 47/467 (10%)
Query: 63 TPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
+P N++ P + +K P+ H F W ++ F + +TF + L +S
Sbjct: 64 SPLPNKLNPDVVFLVIKQNQVIDPKRLH---GFFNWVNSRTVFSQNLSTFSILSLILCNS 120
Query: 123 YRFSELHSVLNFI--SANPCPCSNDGIFSCPE---------MERIFHFAVNAFVKANRMN 171
F +VL + + NP D I C + +F ++ + K +N
Sbjct: 121 GLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLN 180
Query: 172 DGLLAF----------------------------EAMRKLIDGR-----PSVSIYNVLIN 198
+ + F E K+ G P V Y LIN
Sbjct: 181 EAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLIN 240
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ + + ++ M P++VT++++I+G CR D AL L R M KG P
Sbjct: 241 AYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLP 300
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ + TLI GF +++ EG +M EM +G + V L++G + + A ++
Sbjct: 301 DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVK 360
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ R + F Y+ L+ LC G+ A ++ E+ G P + LIEG ++
Sbjct: 361 EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKV 420
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ +A L+ ++ KE + ++ ++ LC G A+ L + GL P+ + Y
Sbjct: 421 QNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIY 480
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+V G +E R +E ++ M D+G PD+ YN+ + G A K
Sbjct: 481 TTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 159/360 (44%), Gaps = 14/360 (3%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGL 174
IV+ L RF E +L + + G+ P++ ++ + F KA +M +G
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMK-------DQGL--SPDV-FCYNTVIIGFCKAGKMEEGK 532
Query: 175 LAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
M + G +P+V Y I+G+ + E A + M+ + P+ V LI
Sbjct: 533 SYLVEM--IAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLID 590
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+C++ A FR M ++G P+V + + LI G K E + + E+++ G
Sbjct: 591 GYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
T L+ LC EG + A EL D ++G+ P Y L+ LC G A E+
Sbjct: 651 DVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELF 710
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D + +KG + + +T+I G + EA L M G+ PDS + L++ C
Sbjct: 711 DGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKA 770
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G T A L L +G+ ++ L+ G+ + + E LV +M+D P+ TY
Sbjct: 771 GNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTY 829
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P IY LI+GF + + + D M +KPD V + LI+GF + A +
Sbjct: 300 PDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQV 359
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + N ++ LI G ++ ++ EM +G + T L++G
Sbjct: 360 KEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYK 419
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA EL+I+ + + + +V LC G+ A E+ E+ G P+++
Sbjct: 420 VQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVI 479
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+++GL + + EA ++ M +G+ PD +N ++ C G+ + +
Sbjct: 480 YTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KGL P+ TY + GY R + E EMLD G P+ +DG
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDG 591
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%), Gaps = 1/285 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN LING K E KA +D + + + VT++ +I+G+C++ A L
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQL 744
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M+ G P+ + LI G ++ +++ M+E G S+ L+DG
Sbjct: 745 FHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFK 803
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++++A +LV D + P Y L+E C GN A ++ E+ K+ +P+V+
Sbjct: 804 LGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLT 863
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L+ G R+ + E L ++M+ GI PD + ++ +++ G + A +L
Sbjct: 864 YTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDML 923
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
++G++ Y IL+ + N E +++E+ +G LAT
Sbjct: 924 SEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ KA L F M + +G S +N LI+GF K + +A +
Sbjct: 759 VYCALIDGCCKAGNTEKALSLFLGMVE--EGIASTPAFNALIDGFFKLGKLIEAYQLVED 816
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + + P+ VT+ ILI C A LF EM+++ PNV+++ +L+ G+ +
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGR 876
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E ++ EM+ G + + ++VD EG +KA +LV D GV Y
Sbjct: 877 RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTI 936
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC N L+V+DE+ K+G+ S+ C TL+ R + EA ++E M++
Sbjct: 937 LIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I+PD T+ L+ C VG+ + + KG P+ +TY ++++G R E
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L M ++G +PD Y + +DG ++S
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTE 320
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 158/323 (48%), Gaps = 13/323 (4%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+A+R+ + +L+ A+ P+V YN ++ G K A D MV + PD+
Sbjct: 290 EASRLGEEMLSRGAV-------PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDL 342
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
V++N LI G+ R A LF E+R + P+VV++NTLI G D + + E
Sbjct: 343 VSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDE 402
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE-- 343
MI+ G + T V G C G + A EL + RG+ P D F + ++ GE
Sbjct: 403 MIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQP---DRFAYITRIVGELK 459
Query: 344 -GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G+ A + +E+ +G P +I I+GL +L EAS L++KML G++PD VT
Sbjct: 460 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 519
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ ++ G A L L +KG+ P +TY +L+ Y R K EM
Sbjct: 520 YTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
++G P++ TYN+ ++GL RK
Sbjct: 580 EKGVHPNVITYNALINGLCKVRK 602
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 13/393 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISA-----NPCPCSNDGIFSC 150
F WA F+ ++ I+ LA + + V+ + + + S
Sbjct: 68 FRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSM 127
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCRE--F 206
P ++ I + +VK + + LL F M + L+ P V N ++ ++ R+
Sbjct: 128 PSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLL---PDVKNCNRVLR-LLRDRDNNI 183
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D A Y+ MV + P VVT+N ++ FC+ AL L +M+ GC+PN V++N L
Sbjct: 184 DVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ G + ++ + +M+ LG E S T + L+ G C +G++ +A L + RG
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+P Y ++ LC G A +++D + K +P +++ TLI G RL EA
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 363
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ++ + P VT+N L++ LC +G A RL+ G DPD T+ V G+
Sbjct: 364 LFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC 423
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + L +EML+ G PD Y + + G
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + + + + L F +R PSV YN LI+G + + D A+ D M
Sbjct: 345 YNTLIYGYTRLGNIGEAFLLFAELRYR-SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEM 403
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV TF + GFC+ +A LF EM +G P+ ++ T I G
Sbjct: 404 IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 463
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M EM+ G +T + +DGL G + +A ELV G++P Y +
Sbjct: 464 SKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSI 523
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR-RLRKGVEASGLMEKMLKEG 395
+ G+ A + E+ KG PSV+ T LI R R + E M ++G
Sbjct: 524 IHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE-MHEKG 582
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ +T+N L+ LC V + A KG+ P+ TY IL++ +E
Sbjct: 583 VHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEAL 642
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +MLD PD T+ S + L+ K
Sbjct: 643 RLYKDMLDREIQPDSCTHRSLLKHLNKDYK 672
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
+ ++L+ + + + L +F +M KG P+V + N ++R R D +++A E
Sbjct: 132 LILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLL---RDRDNNIDVARE 188
Query: 286 ----MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
M+E G + VT ++D C +G V +A +L+ G P D Y LV L
Sbjct: 189 VYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLS 248
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A E++ ++ + G SV LI G + EAS L E+ML G +P V
Sbjct: 249 HSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVV 308
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N ++ LC GR DA +L + K L PD ++Y+ L+ GYTR E L E+
Sbjct: 309 TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 368
Query: 462 LDEGFIPDLATYNSYMDGL 480
P + TYN+ +DGL
Sbjct: 369 RYRSLAPSVVTYNTLIDGL 387
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRE 448
KM+ +G+LPD N +L L D +D R + + G+ P +TY+ ++ + ++
Sbjct: 156 KMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKK 215
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+E L+ +M G P+ TYN ++GLS++
Sbjct: 216 GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHS 250
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 177/379 (46%), Gaps = 9/379 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH T+ ++ L + E S++ + + S +F+ + I+
Sbjct: 8 TFRHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ +NA++++ + D + F R+ P + VL +K + F GFY
Sbjct: 68 VFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVL-EHLMKLKYFKLVWGFYKE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC+ + +A +F + + G P+VVSFNTL+ G+
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+G + M G + T +L++GLC E ++ +A +L + +G++P +
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G A+E ++ + LP +I TLI GL + +A L+++M +G
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ L++ C G A LR + + D + Y L+SG +E R + E
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAE 366
Query: 456 NLVNEMLDEGFIPDLATYN 474
++ EML G PD TY
Sbjct: 367 KMLREMLSVGLKPDNGTYT 385
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 3/267 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + F+++ K RPSV +N L+NG+++
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKW-GLRPSVVSFNTLMNGYIRLG 185
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ + M V+PDV T+++LI+G C+ K + A LF EM +KG PN V+F
Sbjct: 186 DLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFT 245
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G K D + +M+ +T L+ GLC +G + +A +L+ + +
Sbjct: 246 TLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK 305
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C EG+ A E+ + + K+ +A T LI GL + + +A
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDA 365
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLC 411
++ +ML G+ PD+ T+ ++ + C
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFC 392
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N +++ ++ G AM +P V Y+VLING K + ++A ++ M
Sbjct: 174 FNTLMNGYIRLGDLDQGFKLKNAMHA-SGVQPDVYTYSVLINGLCKESKMNEANDLFNEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTF LI G C+N K D A+ +++M + P+++++NTLI G +
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDL 292
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ ++ EM G + +T L+DG C EG + A EL + + D Y L
Sbjct: 293 KQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTAL 352
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC EG A A +++ E+ G P T +I + A+ L+++M ++G
Sbjct: 353 ISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGH 412
Query: 397 LPDSVT 402
+P VT
Sbjct: 413 VPCVVT 418
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 47/404 (11%)
Query: 121 SSYRFSELHSVLN-FISANPCPCSNDGI---------FSCPEMERIFHFAVNAFVKANRM 170
SS + ++LN FIS + P N + F RI+++ +N+++KAN++
Sbjct: 131 SSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKL 190
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV------------- 217
ND + F + + D P + N L+ VK +A Y++MV
Sbjct: 191 NDAIGCFNRLVE-SDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHI 249
Query: 218 ------RDR----------------VKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+D VK D ++I+I FC+N +LA GL ++MR+KG
Sbjct: 250 MMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKG 309
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+ +F ++I + E + + EM+ G + + V LV G C + +++ A
Sbjct: 310 WVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSAL 369
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
E + G P Y L+E C GN A ++ ++ K P+V +LI G
Sbjct: 370 EFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGF 429
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
++ EAS L ++ + I + T+N LL LC G+ +A L KGL P
Sbjct: 430 LKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTK 488
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++Y+ ++ G+ R+ ++ ++MLD G P++ TY+ MDG
Sbjct: 489 VSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDG 532
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 2/310 (0%)
Query: 172 DGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
D AF +++D PS YN+ ING K +A + V P +T+N
Sbjct: 538 DTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYN 597
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
++ GF + AL +REM E G +PNV+++ TLI GF D + M EM
Sbjct: 598 SIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNK 657
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G E L+DG C + + A L + G+ P Y L+ N A
Sbjct: 658 GLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAA 717
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + + +G + TTLI+GL + + V A L +M +GI+PD + + L+
Sbjct: 718 LNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLING 777
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G+ +A ++ + P+ Y+ L++G+ + +E L NEMLD+G P+
Sbjct: 778 LCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPN 837
Query: 470 LATYNSYMDG 479
TY+ ++G
Sbjct: 838 DTTYDILING 847
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V I N LI GF+K ++A +D V + ++ T+N L+S C+ K A L
Sbjct: 417 PTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTL 475
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+++M +KG P VS+N++I G + D ++ +M++ G + + +T IL+DG
Sbjct: 476 WQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFK 535
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A + ++P DF Y + LC G A +++ + +KG +P +
Sbjct: 536 NGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLT 595
Query: 368 CTTLIEGLRRLRKGVEASGLM--EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
++++G +++G +S L +M + G+ P+ +T+ L+ C T A ++R
Sbjct: 596 YNSIMDGF--IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNE 653
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KGL+ D Y L+ G+ ++ + L +E+LD G P+ YNS + G N
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRN 710
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 10/369 (2%)
Query: 113 LFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMND 172
+FIV SL + E + + C IF+ ++ ++ K +M++
Sbjct: 419 VFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFT-------YNSLLSWLCKEGKMSE 471
Query: 173 GLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
++ M L G P+ YN +I G + D A + M+ +KP+V+T++IL
Sbjct: 472 ATTLWQKM--LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSIL 529
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
+ G+ +N + A +F M ++ P+ ++N I G + E +M + +E G
Sbjct: 530 MDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGF 589
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+T ++DG EG V A + GV P Y L+ C N +AL+
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALK 649
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ +E+ KG + A LI+G + + AS L ++L G+ P+SV +N L+
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYR 709
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
++ A L+ +G+ D TY L+ G +E R +L +EM +G IPD+
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769
Query: 472 TYNSYMDGL 480
Y ++GL
Sbjct: 770 IYTVLINGL 778
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 7/317 (2%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F K D + IYN L+N ++K + + A+G ++R+V + P + N L++
Sbjct: 161 FIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALV 220
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N A ++ +M KG + + + + ++R + +E E G + +
Sbjct: 221 KNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAA 280
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
I++ C V AC L+ D +G +P + + ++ +GN AL + DE+
Sbjct: 281 AYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEM 340
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
G +V+ TTL++G + K V A +KM + G P+ VT+ L+E C G
Sbjct: 341 VSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNM 400
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA---TY 473
A L K + P + L+ G+ + R+E L DE D+A TY
Sbjct: 401 AKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKL----FDEAVACDIANIFTY 456
Query: 474 NSYMDGLSNARKSVRQT 490
NS + L K T
Sbjct: 457 NSLLSWLCKEGKMSEAT 473
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + K N+ + + + M L S + +LI+ F +C AL +M
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS-FTILIHCFCRCSRLSLALALLGKM 665
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +P +VT L++GFC+ +F A+ L M G PNVV +NT+I G R
Sbjct: 666 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 725
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + Y M + G +VT L+ GL N GR A L+ D +R + P + L
Sbjct: 726 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EGN A + E+ ++ +P+V +LI G +A + + M+ +G
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+ C R D +L + +GL D TY+ L+ GY + + +
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ N M+D G PD+ TYN +D L N K
Sbjct: 906 VFNRMVDCGVSPDIVTYNILLDCLCNNGK 934
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ + L+ R ++ + F +M + D+ +F ILI FCR + AL +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+F +L+ GF + + ++ M++ G E + V L+DGLC
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A EL+ + ++G+ Y L+ LC G A ++ ++ K+ P V+
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ + EA L ++M++ + P++VT+N ++ LC GR DA + L +
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG P+ +TY+ L+SG+ + EG L M EGF D+ TYN+ + G K
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS+ L+NGF + F +A+ D M P+VV +N +I+G C+N+ + AL
Sbjct: 671 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 730
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M +KG + V++NTLI G ++ + + +M++ + + + L+D
Sbjct: 731 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 790
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG +L+A L + RR V+P F Y L+ C G G A + D + KG P V+
Sbjct: 791 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 850
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI G + ++ + L +M +G++ D+ T+N L+ C G+ A ++
Sbjct: 851 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 910
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ PD +TY+IL+ + ++ +V ++ D+ TYN + GL K
Sbjct: 911 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ F + +R++ L M KL PS+ + L++GF A M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ +P+VV +N LI G C+N + ++AL L EM +KG +VV++NTL+ G ++
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M +M++ VT L+D +G + +A EL + + V P + Y +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A + D + KG P+V+ TLI G + R E L ++M EG
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D T+N L+ C VG+ A + ++ + PD +T+ IL+ G +
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++M + + YN + GL A K
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 42/352 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+N F + NR + + ++M DG P+V IYN +ING K R+ + AL + M
Sbjct: 681 LNGFCQGNRFQEAVSLVDSM----DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 736
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ ++ D VT+N LISG + ++ A L R+M ++ +PNV+ F LI F E
Sbjct: 737 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 796
Query: 278 EGVNMAYEMIEL-----------------------------------GCEFSSVTCEILV 302
E N+ EMI GC VT L+
Sbjct: 797 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 856
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C RV +L + + +G++ F Y L+ C G +A +V + + G
Sbjct: 857 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 916
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P ++ L++ L K +A ++E + K + D +T+N +++ LC + +A L
Sbjct: 917 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 976
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ KG+ PD + Y ++SG R+ ++E + L M ++GF+P Y+
Sbjct: 977 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 40/368 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F NR+ D AF + ++ P+V +YN LI+G K E + AL +
Sbjct: 144 FGSLLHGFCLVNRIGD---AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + + DVVT+N L++G C + ++ A + R+M ++ NP+VV+F LI F +
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + EMI+ + ++VT +++GLC GR+ A + + +G P Y
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C +++ + +G + TLI G ++ K A + M+
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 395 GILPDSVT-----------------------------------FNCLLEDLCDVGRTVDA 419
+ PD +T +N ++ LC + A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L +G+ PD TY I++ G + R+E + L+ M +EG I + + +++
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEE 500
Query: 480 LSNARKSV 487
S++ K +
Sbjct: 501 HSSSNKEI 508
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 157 FHFAVNAFVK-ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ FVK N + L E +R+ + P+V YN LINGF A +D
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSV--VPNVFTYNSLINGFCIHGCLGDAKYMFDL 839
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV PDVVT+N LI+GFC++K+ + + LF EM +G + ++NTLI G+ K
Sbjct: 840 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M++ G VT IL+D LCN G++ KA +V D + + Y
Sbjct: 900 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC A + L +KG P IA T+I GL R EA L +M ++G
Sbjct: 960 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Query: 396 ILPDSVTFNCLLED 409
+P ++ L D
Sbjct: 1020 FMPSERIYDETLRD 1033
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%)
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
C +FD A + M++ R P +V F +++ + KFD+ + L+ +M G + ++ S
Sbjct: 582 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 641
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
F LI F + + + +M++LG S VT L++G C R +A LV
Sbjct: 642 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 701
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G +P Y ++ LC + ALEV + KKG + TLI GL +
Sbjct: 702 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 761
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ L+ M+K I P+ + F L++ G ++A L + + P+ TY+ L+
Sbjct: 762 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 821
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ + + + + M+ +G PD+ TYN+ + G +++
Sbjct: 822 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++ L+ E ++K + + YN++I G + + +A + +
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQK-SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 980
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
R VKPD + + +ISG CR A L R M+E G P+ ++ +R +
Sbjct: 981 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 1035
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 165/363 (45%), Gaps = 36/363 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V A R +GL + M++L RP+ Y L++ + + ++ ++A + M
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKEL-GWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSG 295
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P VVT I+++ +CR + A+ +F MR KGC PNV ++N +++GF K + +
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM 355
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M E G E VT +L+ G C +G + A L+ G+ + Y L++ L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A + D L +G P+ + T+I GL + K A +E M+ G PD+
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDT 475
Query: 401 VTFNCLLEDLCD-----------------------VGRTVDADRL----------RLLAS 427
T++ +E+LC V T+ +RL R+
Sbjct: 476 YTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535
Query: 428 --TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++G PD +TY V Y E R E EN+V EM I D YN+ +DG ++ +
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595
Query: 486 SVR 488
+ R
Sbjct: 596 TDR 598
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNA+ + RM+ + FE+MR P+V YN ++ GF + KA+ D+M
Sbjct: 307 VNAYCREGRMSGAVRVFESMR-FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+PDVVT+N+LI G C + A L R M G + ++N LI K DE
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ + G +SVT +++GLC G+ AC + + G P + Y +E L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENL 485
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + L +DE+ +K PS + T +I L R A+ + +M+ +G PD
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDV 545
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ + C+ GR +A+ + D M Y+ L+ G+T + ++
Sbjct: 546 VTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKH 605
Query: 461 MLDEGFIPDLATY 473
M +P+ T+
Sbjct: 606 MTGVASMPNHFTF 618
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 193/508 (37%), Gaps = 40/508 (7%)
Query: 18 PPPPPAPSIPLPSRPETPPVTLPSVTLT-------PTAH--HTHLLRFLKTHLLTP---- 64
P P P++ PS P T V LP P+ H L L+ H L+P
Sbjct: 30 PSLPQLPALLAPSLPRTLLVPLPLRLAAAVARAAAPSRHLLDISLPVVLRLHALSPPPLR 89
Query: 65 --------------TNNQITPSSLLHFLKSKLHHHPQFT--HYDFHIFAWASTIDSFRHD 108
+ +TP L F H P T Y+ I A D RH
Sbjct: 90 PFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRAD-LRHA 148
Query: 109 HTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCP----EMERIFHFA-VNA 163
+VRS F+ +L + ++D P + + + A +
Sbjct: 149 QRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEG 208
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
F +A R+++ L F M + P + + L+ G ++ L +M +P
Sbjct: 209 FCEAGRIDEALELFREMTQ-----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRP 263
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+ L+ +CR +K + A + EM + G P VV+ ++ + E + V +
Sbjct: 264 TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVF 323
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M GCE + T +V G CN G+V KA L+ GV P Y L+ C +
Sbjct: 324 ESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ G A ++ + G LI+ L + K EA L + + GI P+SVTF
Sbjct: 384 GHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N ++ LC G+ A + G PD TY + + +EG ++EML
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503
Query: 464 EGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ P Y ++ L N R TR
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATR 531
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 149/351 (42%), Gaps = 17/351 (4%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+ ++ ++A K ++++ F+ + + RP+ +N +ING K +FD A F
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGL-EYRGIRPNSVTFNTVINGLCKAGKFDVACTFL 463
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M+ PD T++ I C+ K L EM +K P+ V++ +I F E
Sbjct: 464 ENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNE 523
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R + + +M+ GC VT V CNEGR+ +A +V + + + Y
Sbjct: 524 RNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAY 583
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPS-------------VIACTTLIEGLRRLRK 380
L++ G A+ ++ + ++P+ + + K
Sbjct: 584 NTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWK 643
Query: 381 GVEASGLME--KMLKEGILPDSV-TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+E + + E +++K+ +P S T+ +LE + R + L L + L +
Sbjct: 644 TIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDI 703
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
Y+ LV+ + + + L+ M+ GF+P+L Y + GL+ ++ R
Sbjct: 704 YNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADR 754
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 17/340 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N KA + + E M P Y+ I K + + L F D M
Sbjct: 443 FNTVINGLCKAGKFDVACTFLENMIS-AGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM 501
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ VKP V + I+I+ + + LA ++ +M +GC+P+VV++ T +R + E +
Sbjct: 502 LQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRL 561
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE N+ EM + ++ L+DG + G+ +A ++ + +P F +F L
Sbjct: 562 DEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFIL 621
Query: 337 VEKLCGEGNA----------GIALEVVD-----ELWKKGNLPSVI-ACTTLIEGLRRLRK 380
+ L A +E+ D EL KK ++PS +++EG R+
Sbjct: 622 LRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERR 681
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
E + L+ M +E + + +N L+ C + DA L G P+ + Y
Sbjct: 682 LDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQY 741
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+SG T E + + + + + D + +DG
Sbjct: 742 LLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGF 781
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
S P R + + F + R+ D + + ++ K + + IYN L+N F K R +
Sbjct: 661 SVPSSARTYLSILEGFSEERRL-DEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSD 719
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A M+ P+++ + L+SG + D A +FR R K N + + + +I
Sbjct: 720 AWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIID 779
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
GF + D +M + ++ C+ S T +L + L
Sbjct: 780 GFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 29/273 (10%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRK---LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+V A+ R+++ M+K ++D YN LI+G + D+A+ M
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKKCRTIVDAMA----YNTLIDGHTSIGQTDRAVTILKHM 606
Query: 217 VRDRVKPDVVTFNIL--------------ISGFCRNKKFDLA--LGLFREMREKGCNPNV 260
P+ TF IL + K +LA LF M++ +
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSA 666
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
++ +++ GF ER+ DE ++ M E + LV+ C A L+
Sbjct: 667 RTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCS 726
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV-DELWKKGNLPSVIACTTLIEGLRRLR 379
G LP Y L+ L EG A A E+ WK+ N ++ +I+G +R
Sbjct: 727 MIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVW-KVIIDGF--IR 783
Query: 380 KG-VEASGLMEKMLKE-GILPDSVTFNCLLEDL 410
KG + M ML++ P T+ L E+L
Sbjct: 784 KGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 165/334 (49%), Gaps = 4/334 (1%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFD 207
+C + VNA +A +M++ E R DG ++ YN +I GF++C
Sbjct: 226 ACARDAFTYGILVNAHCRAGQMHEVASFMELARH--DGCALSAVNYNFIIQGFIRCGRLA 283
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A ++ + PDV T+N+LI+ C++K+ + AL LF+E + G +V +++ L+
Sbjct: 284 EATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLM 342
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
F + + + + Y M + GC +V +L+ L +G+V +A EL+ D +R+G++
Sbjct: 343 DAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 402
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y +++ L G A + ++ + P V+ TL+ GL++LR+ EA L
Sbjct: 403 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M +PD TF L++ L GR DA G P+ Y+ L+SG+ R
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCR 522
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ +G L +M++ PD TY + G S
Sbjct: 523 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFS 556
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 1/285 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + ++AF KA R L F M+K P +YNVLI+ K + D+AL + M
Sbjct: 338 YSYLMDAFGKAGRAAKALEVFYNMQK-AGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R + PD T+NI+I +++ A F M+ + +P+VV++NTL+ G R+
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 456
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE ++ EM C T L+D L GR+ A E + G P + Y L
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL 516
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G E+ ++ + P I T L+ G R A L+++M++EG
Sbjct: 517 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 576
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
P T+N L+ L G+ DA L KG +PD TY L
Sbjct: 577 TPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 167/398 (41%), Gaps = 72/398 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F A++ + R+ + F+ MR+ D P V YN LI G+ K + D+AL + R+
Sbjct: 92 FTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRL 151
Query: 217 VRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR-----GF 270
++ KP+ V+F+ L+ C+ + AL +F+EM G +V NTLI G
Sbjct: 152 KQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGM 211
Query: 271 FGERK---------------FDEGVNM-----AYEMIEL----------GCEFSSVTCEI 300
+ + F G+ + A +M E+ GC S+V
Sbjct: 212 LRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNF 271
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE----------------- 343
++ G GR+ +A +L + +P F Y L+ LC
Sbjct: 272 IIQGFIRCGRLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEALTLFQEAEQGG 330
Query: 344 ------------------GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
G A ALEV + K G +P + LI L + K EA
Sbjct: 331 VVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEAL 390
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+E M ++GI+PD T+N +++ L GR A + + PD +TY+ L++G
Sbjct: 391 ELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGL 450
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ R E +L +EM +PDL T+ + +D L+ A
Sbjct: 451 KKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKA 488
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 135/330 (40%), Gaps = 38/330 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD- 219
+ AF +A ++ + + MR+ +P + ++ + R ++A+ +D M
Sbjct: 60 IQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC 119
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFDE 278
PDVV +N LI+G+C+ D AL +FR ++++G C PN VSF+TL+ + +
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM+ G + C L+ C G + +A L+ + F Y LV
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C G E + ME +G
Sbjct: 240 AHCRAGQMH-----------------------------------EVASFMELARHDGCAL 264
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+V +N +++ GR +A +L TK PD TY++L++ + + +E L
Sbjct: 265 SAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLF 323
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
E G + D+ TY+ MD A ++ +
Sbjct: 324 QEAEQGGVVLDVFTYSYLMDAFGKAGRAAK 353
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 3/275 (1%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL Y +++ + D T ++ C+ + +L L E+R+KG + V+ I+
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 269 GFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GV 326
F D + M +M C+ +V + LC RV +A L D
Sbjct: 62 AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEAS 385
P Y L+ C G+ AL++ L ++G+ P+ ++ TL+ L ++ + +A
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ ++ML G+ D N L+ C +G A RL + D TY ILV+ +
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R + E + + +G YN + G
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGF 276
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 168/365 (46%), Gaps = 45/365 (12%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D A + +RK IDGR P+V +YN +I+ K + +A G + M + DV
Sbjct: 176 KIGDTRGAIKLVRK-IDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN---- 281
VT+ LI GFC K A+GL EM K NPNV ++N L+ E K E N
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294
Query: 282 ---------------------MAYEMIELGCEFSSVTC----------EILVDGLCNEGR 310
+ YE+ + F++++ IL++G C
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L + ++ ++P Y L++ LC G +++DE+ +G +VI +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+GL + A L KM +GI P S TF LL+ LC GR DA TKG
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKG 474
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL------SNAR 484
D Y+++++G+ ++ +E ++++M + G +P+ T++ ++ L A
Sbjct: 475 YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAE 534
Query: 485 KSVRQ 489
K +RQ
Sbjct: 535 KLLRQ 539
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 145/292 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +++ F K + + A+ R+ ++PD++T NILI+ FC + +
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ ++G P+ ++F TLI+G + + ++ ++ +++ G +F V+ L++G+C
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A +LV R P Y +++ LC A + E+ KG V+
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI G K EA GL+ +M+ + I P+ T+N L++ LC G+ +A + +
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ PD +TY L+ GY K+ +++ N M G PD+ +Y ++G
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILING 348
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 140/276 (50%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ ++RM+ R P ++ FN ++ F + K + A+ L + KG P++++
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI F + G ++ ++++ G + ++T L+ GLC +G+V KA
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G+ Y L+ +C G+ A+++V ++ + P+V T+I+ L + + E
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL +M +GI D VT+ L+ C + +A L K ++P+ TY+ILV
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E + KE +N++ ML PD+ TY++ MDG
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDG 313
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F ++ G F + K++ +P + LI G + +KAL F+D+++
Sbjct: 101 INCFCHMGQITFG---FSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K D V++ LI+G C+ A+ L R++ + PNV +NT+I + E
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM G VT L+ G C ++ +A L+ + + + P + Y LV+
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC EG A V+ + K P VI +TL++G + + +A + M G+ P
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D ++ L+ C +A L K + P +TY L+ G + R +L+
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLI 397
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
+EM D G ++ TYNS +DGL
Sbjct: 398 DEMRDRGIPANVITYNSLIDGL 419
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 3/308 (0%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ F A+++ + + L E + K I+ P+V YN+L++ K + +A M++
Sbjct: 241 IYGFCIASKLKEAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKNVLAVMLKA 298
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
VKPDV+T++ L+ G+ + A +F M G P+V S+ LI GF + DE
Sbjct: 299 CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEA 358
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+N+ EM + VT L+DGLC GR+ +L+ + RG+ Y L++
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDG 418
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+ A+ + +++ +G P T L++GL + + +A + +L +G D
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLD 478
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+N ++ C G +A + G P+ +T+ I+++ +++ + E L+
Sbjct: 479 VYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLR 538
Query: 460 EMLDEGFI 467
+M+ G +
Sbjct: 539 QMICRGLL 546
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 132/297 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + N+LIN F + ++++ +P +TF LI G C + + AL
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALH 150
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ +G + VS+ TLI G + + ++ + + ++D LC
Sbjct: 151 FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 210
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V +A L + + +G+ Y L+ C A+ +++E+ K P+V
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY 270
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++ L + K EA ++ MLK + PD +T++ L++ V A +
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
S G+ PD +Y IL++G+ + E NL EM + +P + TY+S +DGL +
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 146/298 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+VL+NGF K + Y+ M R + P+ +N LIS +C + D A +
Sbjct: 226 PNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKV 285
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EMREKG V+++N LI G +KF E V + +++ ++G + VT IL++G C+
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ A L G+ P Y L+ N AL++V E+ ++ S +
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVT 405
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ RL +A + M K G++PD T++ L+ C G +A +
Sbjct: 406 YTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLG 465
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L P+ + Y+ ++ GY +E L+NEM+ G +P++A++ S M L K
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEK 523
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 40/319 (12%)
Query: 159 FAVNAFVKANRMNDGLL--AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYD 214
+A N + + NDG++ AF+ ++ + + + YN+LI G + ++F +A+
Sbjct: 264 YAYNCLI-SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH 322
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ + + P++VT+NILI+GFC K D A+ LF +++ G +P +V++NTLI G+
Sbjct: 323 KVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+++ EM E S VT IL+D KACE+ + G++P + Y
Sbjct: 383 NLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYS 442
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C GN A + L + P+ + T+I G + A L+ +M+
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++P+ +F ST GL R+ + KE
Sbjct: 503 GMVPNVASF----------------------CSTMGL-------------LCRDEKWKEA 527
Query: 455 ENLVNEMLDEGFIPDLATY 473
E L+ +M++ G P ++ Y
Sbjct: 528 ELLLGQMINSGLKPSVSLY 546
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IY LI+G K + A + +M R + P+ T+++L++GF + +
Sbjct: 191 PNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQM 250
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M G PN ++N LI + + D+ + EM E G +T IL+ GLC
Sbjct: 251 YENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A +LV ++ G+ P Y L+ C G A+ + ++L G P+++
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI G ++ A L+++M + I VT+ L++ + T A + L
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLME 430
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
GL PD TY +L+ G KE + + P+ YN+ + G S
Sbjct: 431 KSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490
Query: 488 RQTR 491
R R
Sbjct: 491 RALR 494
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 190/468 (40%), Gaps = 43/468 (9%)
Query: 26 IPLPSRPETPPVTLPSVTLTPTA-----HHT-HLLRFLKTHLLTPTNNQITPSSLLHFLK 79
I + + PP+ ++ L TA HHT H + F+ HLL+ S +L +
Sbjct: 9 ILIQKMVKVPPI--KTLLLFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLIS 66
Query: 80 SKLHH-------HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL 132
++ FT + + + ++++ H H+T + LH
Sbjct: 67 GRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSHST----------DQALTFLH--- 113
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVS 191
+ I P SN F+ + +++N + F ++ K++ S
Sbjct: 114 HMIHEGHAPLSNT-----------FNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYS-- 160
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+ ++I G + F + + + P+VV + LI G C+N LA LF +M
Sbjct: 161 -FGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM 219
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G PN +++ L+ GFF + EG M M G ++ L+ CN+G V
Sbjct: 220 DRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMV 279
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
KA ++ + +G+ Y L+ LC G A+++V ++ K G P+++ L
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G + K A L ++ G+ P VT+N L+ V A L + +
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY IL+ + R N + + + M G +PD+ TY+ + G
Sbjct: 400 ARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHG 447
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 36/294 (12%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+Y+ ++N +V D+AL F M+ + P TFN L+ R+ FD A +F +
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL 150
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ K N SF +I G F + + E G + V L+DG C G V
Sbjct: 151 KSK-VVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDV 209
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ A L R G++P Y SV+
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTY------------------------------SVLMNGFF 239
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+GL+R E + E M + GI+P++ +NCL+ + C+ G A ++ KG+
Sbjct: 240 KQGLQR-----EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGI 294
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
MTY+IL+ G R + E LV+++ G P++ TYN ++G + K
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGK 348
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 170/364 (46%), Gaps = 13/364 (3%)
Query: 115 IVRSLASSYRFSELHSVLNF-ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
+++ L R E +L+ + CS D + ++ +N F +++
Sbjct: 161 LLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVS--------YNIVINGFFNEGQVDKA 212
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
F M P V YN +I+G K +E D+A + +MV VKP+ VT+N +I
Sbjct: 213 YSLFLEMGV----SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIID 268
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C+ ++ D+A G+F++M +KG P+ V++NT+I G + D + +MI+ G +
Sbjct: 269 GLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKP 328
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT ++DGLC + KA + +GV P + Y +++ LC + A V
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVF 388
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ KG P+ LI G + E +++M + PD T+ LL+ LC
Sbjct: 389 QQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKN 448
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ +A L KG+ P Y I++ GY ++ E +L+N M+ G P+ +
Sbjct: 449 GKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIF 508
Query: 474 NSYM 477
N+ +
Sbjct: 509 NTVI 512
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 154/305 (50%), Gaps = 7/305 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG- 246
P Y+++I F + + + +++ + D + N L+ G C K+ A+
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE---LGCEFSSVTCEILVD 303
L R+M E GC VVS+NTL++G R+ +E + + M++ C V+ I+++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G NEG+V KA L F GV P Y +++ LC A +V ++ +KG P
Sbjct: 202 GFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ + T+I+GL + ++ A G+ +KM+ +G+ P +VT+N +++ LC A+ +
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G+ PD +TY+ ++ G + + E + +M+D+G PD TY +DGL A
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 484 RKSVR 488
+ R
Sbjct: 379 QSVDR 383
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 17/358 (4%)
Query: 145 DGIFSCPEMER---IFHFAVNAFVKANRMN-----DGL-------LAFEAMRKLIDG--R 187
DG+ E++R +F V VK N + DGL +A +K++D +
Sbjct: 233 DGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVK 292
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS YN +I+G K + D+A G + +M+ VKPD VT+N +I G C+ + D A G+
Sbjct: 293 PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGV 352
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F++M +KG P+ +++ +I G + D + +MI+ G + ++ T L+ G +
Sbjct: 353 FQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLS 412
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ + + + + S + P F Y L++ LC G A + D + +KG PSV
Sbjct: 413 TGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTI 472
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ G + E L+ M+ GI P+ FN ++ + + +
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMK 532
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL P+ +TY L+ + R + N+M++EG P+ +NS + GL K
Sbjct: 533 QQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 163/326 (50%), Gaps = 16/326 (4%)
Query: 170 MNDGLLAFEAMRKLIDGRP-SVSIYNVLIN--GFVKCREFDK-ALGFYDRMVRD---RVK 222
++D L F+ + L+ RP SV N L++ KC K A+ ++RM+RD +V
Sbjct: 24 LHDALKLFDEL--LLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVA 81
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN- 281
PD T++I+I FCR + +L F + + G + + N L++G ++ E ++
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV---IDFSRRGVLPKDFDYFGLVE 338
+ +M E+GC V+ L+ GLC+ R +A EL+ +D P Y ++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
EG A + E+ G P V+ T+I+GL + ++ A + ++M+++G+ P
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
++VT+N +++ LC A+ + KG+ P +TY+ ++ G + E +
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNAR 484
+M+D G PD TYN+ +DGL A+
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQ 344
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 160/334 (47%), Gaps = 15/334 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ KA ++ F+ M ID +P+ YN LI+G++ ++++ +
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQM---IDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIK 424
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++PDV T+ +L+ C+N K + A LF M KG P+V + ++ G+ +
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKG 484
Query: 275 KFDEGVNMAYEMIELGCE-----FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E ++ M+ G F++V C + +E + I ++G+ P
Sbjct: 485 ALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDE-----VMHIFIKMKQQGLSPN 539
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ LC G A+ +++ +G P+ + +L+ GL + K + L
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ML +GI PD V FN +L +LC GR ++A RL GL PD ++Y+ L+ G+ +
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R E L++ M+ G P++ +YN+ + G A
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKA 693
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 3/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K + N+ F++M RK I +PSV+IY ++++G+ K + +
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGI--KPSVTIYGIMLHGYGKKGALSEMHDLLNL 495
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + + P+ FN +I + + D + +F +M+++G +PNVV++ TLI +
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ V +MI G ++V LV GLC + K EL ++ +G+ P +
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC EG A ++D + G P VI+ TLI+G + EA L++ M+ G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ V++N LL C GR +A L KG+ P TY+ +++G R R E
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
L M+ + + TY+ +DG
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDG 759
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y +L++ K + ++A +D M+R +KP V + I++ G+ +
Sbjct: 430 DLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G +PN FNT+I + DE +++ +M + G + VT L+D
Sbjct: 490 HDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDA 549
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GRV A GV P + + LV LC E+ E+ +G P
Sbjct: 550 LCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPD 609
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ T++ L + + +EA L++ M+ G+ PD +++N L++ C R +A +L
Sbjct: 610 IVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLD 669
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ GL P+ ++Y+ L+ GY + R L EML +G P + TYN+ ++GL
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 14/300 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ I+N +I + K D+ + + +M + + P+VVT+ LI C+ + D A+
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE-----FSSVTCEILV 302
F +M +G PN V FN+L+ G K+++ + EM+ G F++V C
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN--- 619
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
LC EGRV++A L+ G+ P Y L++ C A++++D + G
Sbjct: 620 --LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P++++ TL+ G + + A L +ML++G+ P T+N +L L GR +A L
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Query: 423 --RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ S K TY I++ G+ + N E + + D+ T+N +DGL
Sbjct: 738 YVNMIKSRKLWSI--CTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 172/415 (41%), Gaps = 49/415 (11%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS---CPEMER-----IFHF-- 159
T + ++ SE+H +LN + AN N IF+ C +R + H
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGIS-PNHRIFNTVICAYAKRAMIDEVMHIFI 529
Query: 160 ----------------AVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVK 202
++A K R++D +L F M + +G P+ ++N L+ G
Sbjct: 530 KMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM--INEGVTPNNVVFNSLVYGLCT 587
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+++K + M+ ++PD+V FN ++ C+ + A L M G P+V+S
Sbjct: 588 VDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVIS 647
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTLI G + DE V + M+ G + + V+ L+ G C GR+ A L +
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
R+GV P Y ++ L G A E+ + K L S+ + +++G +
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA + + + + D +TFN +++ L GR DA L GL P +TY ++
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827
Query: 443 SGYTRENRRKEGE-------------------NLVNEMLDEGFIPDLATYNSYMD 478
E +E + L+ ++LD G IP Y S +D
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLD 882
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 6/283 (2%)
Query: 181 RKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
R+LID +P V YN LI+G D+A+ D MV +KP++V++N L+ G
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+C+ + D A LFREM KG P V ++NT++ G F +F E + MI+ +S
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS 749
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
T I++DG C +A ++ + + +++ L G A+++
Sbjct: 750 ICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFA 809
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ G +PSV+ + E L E L M K G P+S N L+ L D G
Sbjct: 810 AIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRG 869
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
A K + T +L+S ++RE ++ ++L
Sbjct: 870 EIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 6/203 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ + KA R+++ F E +RK + P V YN ++NG + F +A Y
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGV--TPGVETYNTILNGLFRSGRFSEARELYVN 740
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ R + T++I++ GFC+N FD A +F+ + ++++FN +I G F +
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ +++ + G S VT ++ + L EG + + L + G P
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860
Query: 336 LVEKLCGEGN---AGIALEVVDE 355
L+ KL G AG L +DE
Sbjct: 861 LIRKLLDRGEIPRAGAYLSKLDE 883
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 155/308 (50%), Gaps = 6/308 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS N L++ V D A + +R RV PD+ TFNI+ISG C+ + A
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN---MAYEMIELGCEFSSVTCEILVD 303
+ +++R G P+VV++NT+I G+ + + + EM+E G + VT +LV+
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C + A + + ++G+ Y LV LC EG +++VDE+ G +P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++ +++ G + +A G ++ M ++ + P+ VT+ L++ + + DA ++
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL--- 480
S KG+ P+ Y+ L++G+TR + L++EM +G D+ TYN + L
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446
Query: 481 SNARKSVR 488
RK+V+
Sbjct: 447 GEVRKAVK 454
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 177/400 (44%), Gaps = 80/400 (20%)
Query: 159 FAVN----AFVKANRMNDGLLAFEA-MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
F+VN A V A R++ AF+A +R+ + P + +N++I+G K + KA
Sbjct: 151 FSVNRLLSALVAAERVDLAERAFKAALRRRVS--PDLFTFNIVISGLCKTGQLRKAGDVA 208
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLAL---GLFREMREKGCNPNVVSFNTLIRGF 270
+ + P VVT+N +I G+C+ + L +EM E G +PN V+FN L+ G+
Sbjct: 209 KDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGY 268
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ V + EM + G S VT LV GLC+EG+V + +LV + G++P
Sbjct: 269 CKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNL 328
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA------ 384
++ C +G A +D + +K P+V+ T L++G RRL K +A
Sbjct: 329 ATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEA 388
Query: 385 -----------------------------SGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
SGL+++M +G+ D VT+N L+ LC G
Sbjct: 389 MSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGE 448
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYT----------------------------- 446
A +L GL+P +TY+ +++GY
Sbjct: 449 VRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNV 508
Query: 447 ------RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R + +E L+NEML++G +P+ TY++ +G+
Sbjct: 509 FIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ N ++NGF K A G+ D M + VKP+VVT+ IL+ G+ R K AL +
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV 385
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M KG PN +N LI GF + + EM G VT +L+ LC
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCV 445
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G V KA +L+ + G+ P Y ++ C +GN A E+ + K +V+
Sbjct: 446 KGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVT 505
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
I+ L R+ K E + L+ +ML++G++P+ VT++ + E + + G T D
Sbjct: 506 YNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 17/245 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F K M D ++M + + +P+V Y +L++G+ + + AL + M
Sbjct: 335 LNGFCKKGMMTDAEGWIDSMEQK-NVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKG 393
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+P+ +N LI+GF RN + GL EMR KG ++V++N LI + + + V
Sbjct: 394 VRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAV 453
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ +G E +T +++G C +G + A E+ + Y ++ L
Sbjct: 454 KLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCL 513
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G E+++E+ +KG +P+ + T+ EG M+++G PD
Sbjct: 514 CRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG----------------MMEKGYTPDV 557
Query: 401 VTFNC 405
F C
Sbjct: 558 RGFTC 562
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 25/321 (7%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E F+ VN + K + + FE M++ G SV Y+ L+ G + ++ +
Sbjct: 258 EVTFNVLVNGYCKDSNTAAAVRVFEEMKQ--QGIAASVVTYSALVWGLCSEGKVEEGVKL 315
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D M + P++ T N +++GFC+ A G M +K PNVV++ L+ G+
Sbjct: 316 VDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRR 375
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K + + + M G ++ L+ G G L+ + +GV
Sbjct: 376 LDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVT 435
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLME 389
Y L+ LC +G A++++DE+ G P + T+I G ++ E ME
Sbjct: 436 YNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRME 495
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
K K + VT+N ++ LC +G+ + + L KGL P+G+TY +
Sbjct: 496 KGKKRA---NVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI-------- 544
Query: 450 RRKEGENLVNEMLDEGFIPDL 470
KEG M+++G+ PD+
Sbjct: 545 --KEG------MMEKGYTPDV 557
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 19/377 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ T+ ++ +L + +++ +L N G+F P ++ V+ + K
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLL-------LQMKNSGLF--PN-RNTYNILVHGYCKL 294
Query: 168 NRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ + E L+ G+ P V YN ++ G + D+A+ D+M ++ PD
Sbjct: 295 KWLKEAAEVIE----LMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPD 350
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVT+N LI G ++ D A L EM+ +G N V+ N +I+ F E K DE N+
Sbjct: 351 VVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMV 410
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+E G T +++G C G++ +A +++ + R+G+ F L+ +C E
Sbjct: 411 KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEK 470
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A + + K+G + + TLI G + + A L E+M + GI+ +T+N
Sbjct: 471 QLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYN 530
Query: 405 CLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
++ LC G+T A D+L L KGL PD T +I++ GY E ++ N+M++
Sbjct: 531 TIIRGLCLSGKTDQAVDKLNELLE-KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVE 589
Query: 464 EGFIPDLATYNSYMDGL 480
PD+ T N + GL
Sbjct: 590 HSLKPDIFTCNILLRGL 606
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 19/408 (4%)
Query: 82 LHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL-NFISANPC 140
LH P+ T F + ++ S H L ++ L S +FS+ S+L NFIS++
Sbjct: 63 LHSQPE-TLLSFFKWFQSNAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDHP 121
Query: 141 PCS-------NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY 193
S +D P + ++ A+V + + + G F M++L RP++
Sbjct: 122 HHSLHAHLLRSDHTIPKP----LLDTSLAAYVISKQPHLGHQIFNKMKRL-RFRPNLLTC 176
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGFCRNKKFDLALGLFR 249
N L+N V+ +L F + +D VK P+V TFNILI G+C + + AL L
Sbjct: 177 NTLLNALVRSNS-SHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLIN 235
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M E GC P+ V++NT++ + + ++ +M G + T ILV G C
Sbjct: 236 QMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLK 295
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+ +A E++ + +G+LP + Y +V LC EG A+ + D++ +P V+
Sbjct: 296 WLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYN 355
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
TLI+G R A L+E+M G+ + VT N +++ C G+ +A + +
Sbjct: 356 TLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVES 415
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
G PD TY+ +++GY + + E +++EM +G D T N+ +
Sbjct: 416 GFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLL 463
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 7/320 (2%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+A R+ D + +F KL+ P V YN LI+G + R D A + M VK +
Sbjct: 334 EAVRLRDKMESF----KLV---PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENG 386
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT NI+I FC K D A + +M E G +P+ ++NT+I G+ K E M E
Sbjct: 387 VTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDE 446
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M G + + T L+ +C E ++ A L + +RG + + Y L+ +
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A AL++ +E+ + G + ++I T+I GL K +A + ++L++G++PD T N
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
++ C G A + L PD T +IL+ G RE ++G L N + +G
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 466 FIPDLATYNSYMDGLSNARK 485
D TYN + R+
Sbjct: 627 KPMDTVTYNIIISSFCKERR 646
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 166/358 (46%), Gaps = 39/358 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRM-- 216
+NA V++N + + + E + + +P+V+ +N+LI+G+ ++AL ++M
Sbjct: 180 LNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGE 239
Query: 217 -------------------------VRD---RVK-----PDVVTFNILISGFCRNKKFDL 243
VRD ++K P+ T+NIL+ G+C+ K
Sbjct: 240 YGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKE 299
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + M KG P+V ++NT++RG E K DE V + +M VT L+D
Sbjct: 300 AAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLID 359
Query: 304 GLCNEGRVLKAC-ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C E R A +LV + RGV + +++ C EG A V+ ++ + G
Sbjct: 360 G-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFS 418
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P T+I G + K EA +M++M ++G+ D+ T N LL +C + DA L
Sbjct: 419 PDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTL 478
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ A +G D +TY L+ GY ++ + L EM + G + + TYN+ + GL
Sbjct: 479 TMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGL 536
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 20/349 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI----YNVLINGFVKCREFDKALGF 212
++ +N + KA +M + A++ M ++ GR + + N L++ ++ D A
Sbjct: 424 YNTMINGYCKAGKMAE---AYKMMDEM--GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTL 478
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ + D VT+ LI G+ ++++ D AL L+ EM+E G ++++NT+IRG
Sbjct: 479 TMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCL 538
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K D+ V+ E++E G T I++ G C EG V KA + + P F
Sbjct: 539 SGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFT 598
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L+ LC EG L + + KG + +I + R+ +A LM +M
Sbjct: 599 CNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEME 658
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG-----------LDPDGMTYHIL 441
+ + PD T+N ++ L GRT +A++L L + KG L M Y
Sbjct: 659 GKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQ 718
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+S + + K+ L + +G + TY MDGL RKS T
Sbjct: 719 ISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTT 767
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P S N++I+G+ +KA F+++MV +KPD+ T NIL+ G CR + L L
Sbjct: 559 PDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTL 618
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F KG + V++N +I F ER+ ++ ++ EM E T +V GL
Sbjct: 619 FNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTK 678
Query: 308 EGRVLKACELVIDFSRRGVLPK-----------DFDYFGLVEKLCGEGNAGIALEVVDEL 356
GR +A +L + F+ +G K D Y + LC +G A+++ +
Sbjct: 679 AGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQA 738
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+KG + L++GL + RK + L+ M+ I
Sbjct: 739 EQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATI 778
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
Query: 296 VTCEILVDGLCNEGR---VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+TC L++ L ++ + E+ D + GV P + L+ C + N AL +
Sbjct: 174 LTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRL 233
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++++ + G P + T++ L + + + L+ +M G+ P+ T+N L+ C
Sbjct: 234 INQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCK 293
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ +A + L + KG+ PD TY+ +V G E + E L ++M +PD+ T
Sbjct: 294 LKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVT 353
Query: 473 YNSYMDGLSNARKS 486
YN+ +DG R S
Sbjct: 354 YNTLIDGCFEHRGS 367
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 191/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER----- 155
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 156 ---IFHFAVNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
+F + A++++ + D + + F+ RK+I+
Sbjct: 65 DXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ F K E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKI 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G +P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + +LP Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ ++ G L+ EM G++P++ T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D F+ LI+ + + A+ +R +E + +I + F
Sbjct: 63 RSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 8/188 (4%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEV 352
TC +++ L LK +LV F + P +F L+ C EG +A V
Sbjct: 103 TCRKVIEHLMK----LKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSV 158
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
D + K G PSV++ TL+ G ++ E L M G+ PD T++ L+ LC
Sbjct: 159 FDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCK 218
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ DA+ L GL P+ +T+ L+ G+ + R + +ML + +PDL T
Sbjct: 219 ESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLIT 278
Query: 473 YNSYMDGL 480
YN+ + GL
Sbjct: 279 YNTLIYGL 286
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + ++ R+ D L +M P YN ++ G +++++A M+R+
Sbjct: 191 IDGYCRSGRLADALRLIASMPVA----PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNS 246
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VTF I FC+N D A+ L +M + GC P+V+ ++TL+ GF + DE +
Sbjct: 247 CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEAL 306
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M+ C ++V + GLC GR + EL+ + R+ P D + L+ L
Sbjct: 307 KLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSL 363
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A+EV++++ K G +P V++ T+I + +A L++ ML + PD+
Sbjct: 364 CQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCK---PDT 420
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++FN +L+ LC R DA L K + MT++IL+ + + K+ +
Sbjct: 421 ISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFEL 480
Query: 461 MLDEGFIPDLATYNSYMDGLS 481
M +PD+ TY+S ++G S
Sbjct: 481 MPKYRCMPDIVTYSSLINGFS 501
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 12/330 (3%)
Query: 157 FHFAVNAFVKANRMND-GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ A+ A R + G L E +RK D P+ + ++ LIN + R + A+ ++
Sbjct: 321 YNAALKGLCIAGRWEEVGELIAEMVRK--DCPPNDATFSTLINSLCQNRLVEYAVEVLEQ 378
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + PDVV++N +IS F + D AL L + M C P+ +SFN +++ ++
Sbjct: 379 MQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKR 435
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + V + +M++ C + +T IL+D LC G+V A E+ + +P Y
Sbjct: 436 WYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSS 495
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ +G +A ++ + + ++ S A ++GL + +A L+ M+ E
Sbjct: 496 LINGFSEQGLDEMAFDLFRSMPCRADIFSYNA---TLKGLCMAARWDDAGELIADMVTED 552
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
LP+ VTFN L+ LC G A + G+ PD TY+ L++GY+ + R +
Sbjct: 553 CLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDAL 612
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ M E PD +YNS + GL A +
Sbjct: 613 KFLSTMPCE---PDTISYNSILKGLCRAER 639
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 152/334 (45%), Gaps = 10/334 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
+ C I+ VN F + R+++ L M RP+ YN + G ++
Sbjct: 280 YGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML----CRPNTVCYNAALKGLCIAGRWE 335
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ MVR P+ TF+ LI+ C+N+ + A+ + +M++ G P+VVS+NT+I
Sbjct: 336 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTII 395
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
F + + D+ + + M+ C+ +++ ++ LC R A ELV ++
Sbjct: 396 SCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCR 452
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
+ + L++ LC G A+EV + + K +P ++ ++LI G A L
Sbjct: 453 INEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDL 512
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
M D ++N L+ LC R DA L T+ P+ +T++IL+S +
Sbjct: 513 FRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQ 569
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ ++ +M G PD+ TYN+ ++G S
Sbjct: 570 KGLVNRAIDVYEQMPKYGITPDIFTYNALINGYS 603
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 12/284 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F R +D L ++M +P +N ++ K + + A+ +M
Sbjct: 391 YNTIISCFSDQARADDALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 446
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + + +TFNILI C+N + A+ +F M + C P++V++++LI G F E+
Sbjct: 447 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLING-FSEQGL 505
Query: 277 DEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE MA+++ + C + + GLC R A EL+ D LP + +
Sbjct: 506 DE---MAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNI 562
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC +G A++V +++ K G P + LI G + +A + M E
Sbjct: 563 LISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE- 621
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
PD++++N +L+ LC R DA++L K P+ +T+
Sbjct: 622 --PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 663
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 8/299 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V N+LI R A + + + D V+ N L++G+CR+ A +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEAL-KASGAADAVSHNTLVAGYCRDGSLGDAERV 172
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R G NVV++ LI G+ + + + + M + T ++ GLC
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A EL+ + R P + + + C G A+E+++++ K G P VI
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TL+ G + EA L+ ML P++V +N L+ LC GR + L
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMV 345
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
K P+ T+ L++ + + ++ +M G++PD+ +YN+ + S+ ++
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARA 404
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 7/335 (2%)
Query: 140 CPCSNDGIFSCPEMERI---FHFAVNAFVKANRMNDGLL--AFEAMRKLIDG--RPSVSI 192
C CS+D + EM + V DG L A + K+ D P V
Sbjct: 358 CRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVIT 417
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+ K KA D MVR +K D T N ++ C+ K+++ A GL +
Sbjct: 418 YNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPP 477
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ VS+ T++ +F E + + + EMIE S T L+ GL GR+
Sbjct: 478 QRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLK 537
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + + + +G++P D Y ++ C EG+ A + +++ + P V+ C TL+
Sbjct: 538 EAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLM 597
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL K +A L E +++G D +T+N L++ +C G A +GL
Sbjct: 598 NGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQ 657
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
PD TY++++S + R +E +N+++++ + G +
Sbjct: 658 PDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTL 692
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +A ++++ + M +L P V YN L + KCR AL + M
Sbjct: 312 YNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEM 371
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VK +VT NI+I G C++ + + ALG +M + G P+V+++NTLI
Sbjct: 372 REKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNI 431
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ G + + T ++ LC E R +A L+ +RG +P + Y +
Sbjct: 432 AKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTV 491
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ E N+ AL + DE+ +K PS+ TLI+GL R+ + EA + +++++G+
Sbjct: 492 MAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGL 551
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD T+N ++ C G +A + PD +T + L++G + +
Sbjct: 552 VPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALK 611
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L +++G D+ TYN+ + +
Sbjct: 612 LFESWVEKGKKVDVITYNTLIQTM 635
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 184/428 (42%), Gaps = 65/428 (15%)
Query: 72 SSLLHFLKSKLHHHPQFTHYDFHIFAWA--------STIDSFRH--------DHTTFLFI 115
+ LLH L+ ++ P + + A A +++D+FR +H TF +
Sbjct: 151 AQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLL 210
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
V + S ++ S L+ + F ++ +NA + + +
Sbjct: 211 VHTHCSKGTLADALSTLSTMQG----------FGLSPDAVTYNTLLNAHCRKGMLGEARA 260
Query: 176 AFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
M+K DG P+ YN L++ + + +A + M + +PD+ T+N+L +G
Sbjct: 261 LLARMKK--DGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG 318
Query: 235 FCRNKKFDLALGLFREMREKGCN-PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ K D A L EM G P+VV++NTL F R + + + EM E G +
Sbjct: 319 LCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKA 378
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT I++ GLC KD + G AL +
Sbjct: 379 TLVTHNIVIKGLC----------------------KDGELEG-------------ALGCL 403
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+++ G P VI TLI + +A LM++M++ G+ D+ T N +L +LC
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE 463
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
R +A L +G PD ++Y +++ Y +E + L +EM+++ P ++TY
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523
Query: 474 NSYMDGLS 481
N+ + GLS
Sbjct: 524 NTLIKGLS 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y ++ + K + AL +D M+ ++ P + T+N LI G R + A+
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E+ EKG P+ ++N +I + E + +M+E + VTC L++GLC
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ KA +L + +G Y L++ +C +G+ AL ++ +G P
Sbjct: 603 NGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFT 662
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ L + EA ++ K+ + G L S + L D + +
Sbjct: 663 YNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETV 722
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D Y LV+G + KE + +++EM+ +G D +TY + M+GL +K
Sbjct: 723 ENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 17/235 (7%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALG 211
+ ++ ++A+ K + + AF+ K+++ +P V N L+NG + DKAL
Sbjct: 555 DTTYNIIIHAYCKEGDLEN---AFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALK 611
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ V K DV+T+N LI C++ D AL F +M +G P+ ++N ++
Sbjct: 612 LFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALS 671
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE---GRVLKACELVIDFSRRGVLP 328
+ +E NM +++ E G S + +L +E G+ K E ++ P
Sbjct: 672 EAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVEN------P 725
Query: 329 KDF---DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+D Y LV LC G A ++DE+ +KG TL+EGL + +K
Sbjct: 726 QDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 380 KGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
KG A L + M G+ PD+VT+N LL C G +A L G+ P T
Sbjct: 217 KGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPT 276
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y+ LVS Y R K+ +V M GF PDL TYN GL A K
Sbjct: 277 YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGK 324
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 165/329 (50%), Gaps = 1/329 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+C R + + A + R + L F+ M + +P+V Y VLI + FD
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK-HCQPNVHTYTVLICSLCEDSNFDD 362
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M+ + P VVT+N LI G+C+ AL + M C+PN ++N LI
Sbjct: 363 AKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELIL 422
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
GF + + +++ ++M+E + + VT IL+ G C EG + A +L+ + G++P
Sbjct: 423 GFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVP 482
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
++ Y ++ LC G A + + L +KG + + +TLI+G ++ K + L+
Sbjct: 483 DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL 542
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+KML G +P+S+T+N L++ C +A L + + ++P TY IL+ ++
Sbjct: 543 DKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKD 602
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ + ++ ++ML G PD+ Y +++
Sbjct: 603 DEFDQAHDMFDQMLSTGSHPDVFIYTAFI 631
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 5/306 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ N ++NG+ K +A + ++V+ + D T+ LI G+CRNK D A +
Sbjct: 202 PNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAI 261
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KGC N VS+ LI GF R+ DE + + +M E C + T +++ LC
Sbjct: 262 FLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQ 321
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR +A + + + + P Y L+ LC + N A ++++ + +KG +PSV+
Sbjct: 322 LGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVT 381
Query: 368 CTTLIEGLRRLRKGVEASGL--MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
LI+G +KG+ AS L + M P++ T+N L+ C A L
Sbjct: 382 YNALIDGY--CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L P+ +TY+IL+ G +E L++ M + G +PD TY+ ++D L R
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCK-RG 498
Query: 486 SVRQTR 491
V + R
Sbjct: 499 LVEEAR 504
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 151/331 (45%), Gaps = 1/331 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C E + ++ F +A R+++ L F M + + P+V Y V+I + +A
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHE-DNCWPTVRTYTVIIFALCQLGRKTEA 328
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L + M +P+V T+ +LI C + FD A + M EKG P+VV++N LI G
Sbjct: 329 LNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDG 388
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + + M C ++ T L+ G C + KA L+ R + P
Sbjct: 389 YCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPN 448
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L+ C EG+ G A +++ + + G +P + I+ L + EA L E
Sbjct: 449 VVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFE 508
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ ++GI + V ++ L++ C VG+ D L + G P+ +TY+ L+ GY +E
Sbjct: 509 SLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEK 568
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KE LV+ M+ P TY +D L
Sbjct: 569 NFKEARLLVDIMIKRDIEPAADTYTILIDNL 599
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 135/297 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN LI GF + + KA+ +M+ +++P+VVT+NILI G C+ A L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M E G P+ +++ I +E ++ + E G + + V L+DG C
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V L+ G +P Y L++ C E N A +VD + K+ P+
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ L + + +A + ++ML G PD + + C GR DA+ L +
Sbjct: 592 YTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMN 651
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ PD M Y + + Y R ++ M + G P TY+ + LSNA+
Sbjct: 652 AKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 146/334 (43%), Gaps = 36/334 (10%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI G+ + + D A + M + V++ LI GFC ++ D AL LF +M
Sbjct: 242 YTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMH 301
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E C P V ++ +I + E +NM EM E C+ + T +L+ LC +
Sbjct: 302 EDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFD 361
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +++ +G++P Y L++ C +G + ALE++ + P+ LI
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G R + +A L+ KML+ + P+ VT+N L+ C G A +L L + GL
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481
Query: 433 PDGMTYHI-----------------------------------LVSGYTRENRRKEGENL 457
PD TY + L+ GY + + +G L
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+++ML G +P+ TYNS +DG K+ ++ R
Sbjct: 542 LDKMLSAGCVPNSITYNSLIDGYCK-EKNFKEAR 574
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 152/363 (41%), Gaps = 34/363 (9%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREF 206
+C R ++ + F + ++ + M RKL +P+V YN+LI+G K +
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL---QPNVVTYNILIHGQCKEGDL 465
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
A M + PD T+++ I C+ + A LF ++EKG N V ++TL
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ K +G + +M+ GC +S+T L+DG C E +A LV +R +
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L++ L + A ++ D++ G+ P V T I + +A
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEV 645
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV---- 442
L+ KM +GI+PD++ + ++ G A + G +P TY L+
Sbjct: 646 LICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS 705
Query: 443 ----------------------SGYTRENRRKEGE---NLVNEMLDEGFIPDLATYNSYM 477
+ ++ RR + E +L +M + G P+ TY ++
Sbjct: 706 NAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFI 765
Query: 478 DGL 480
GL
Sbjct: 766 TGL 768
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 20/318 (6%)
Query: 187 RPSVSIYNVLI-NGFVKCREFDKALG-----------FYDRMVRD--------RVKPDVV 226
+ VS+ N+L+ NG+++ E + L F M+R + K +
Sbjct: 111 QSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLR 170
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N+L+ R D ++ EM + PN+ + NT++ G+ E ++
Sbjct: 171 CYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKI 230
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
++ G + T L+ G C V A + + +G L + Y L+ C
Sbjct: 231 VQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRV 290
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
AL++ ++ + P+V T +I L +L + EA + ++M ++ P+ T+ L
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ DA ++ KGL P +TY+ L+ GY ++ +++ M
Sbjct: 351 ICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNC 410
Query: 467 IPDLATYNSYMDGLSNAR 484
P+ TYN + G +
Sbjct: 411 SPNARTYNELILGFCRGK 428
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 130/329 (39%), Gaps = 29/329 (8%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
IY+ LI+G+ K + D+M+ P+ +T+N LI G+C+ K F A L M
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIM 580
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++ P ++ LI + +FD+ +M +M+ G + C+ GR+
Sbjct: 581 IKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRL 640
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A L+ + +G++P Y ++ G+ A ++ + + G PS + L
Sbjct: 641 KDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCL 700
Query: 372 IEGLRRLR--------------KGVEAS---------------GLMEKMLKEGILPDSVT 402
I+ L + GV ++ L KM + G P++ T
Sbjct: 701 IKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANT 760
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ + LC VG A RL KG P+ Y+ L+ + E ++ M+
Sbjct: 761 YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMI 820
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ +P L + + GL + + R
Sbjct: 821 ENRHLPHLDSCKLLLCGLYDEGNDEKAKR 849
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 133/354 (37%), Gaps = 30/354 (8%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + K + L + M K D P+ Y +LI+ +K EFD+A +D+M+
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKR-DIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDV + I +C + + A L +M KG P+ + + I + D
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCN-------------------EGRVLKACELVIDF 321
+ M E+GCE S T L+ L N C +D+
Sbjct: 680 GILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDY 739
Query: 322 ----------SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ G P Y + LC G +A + D + +KG P+ +L
Sbjct: 740 EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSL 799
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+ +L EA ++ M++ LP + LL L D G A R+
Sbjct: 800 LGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEY 859
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ D M + +L+ G ++ + +L M +G TY+ ++G ++
Sbjct: 860 NYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQE 913
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%)
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
E + +ML + + P+ T N ++ C +G V+A+ GL D TY L+
Sbjct: 187 EMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLI 246
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GY R + M ++G + + +Y + + G AR+
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARR 289
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 15/334 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYD 214
+ ++ F + ++ D L+F + +++D +S+Y N LING K + A GF
Sbjct: 405 YSILIDMFCRRGKL-DTALSF--LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ +++P VVT+ L+ G+C K + AL L+ EM KG P++ +F TL+ G F
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ V + EM E + + VT ++++G C EG + KA E + + + +G++P + Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A A VD L K + I T L+ G R K EA + ++M++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK-----GLDPDGMTYHILVSGYTREN 449
G+ D V + L++ G DR K GL PD + Y ++ ++
Sbjct: 642 GVDLDLVCYGVLID-----GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KE + + M++EG +P+ TY + ++GL A
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 1/328 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +++ K + ++ L F+ M K I RP+ Y++LI+ F + + D AL F
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGK-IGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +K V +N LI+G C+ A G EM K P VV++ +L+ G+ + K
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + +EM G S T L+ GL G + A +L + + V P Y
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E C EG+ A E + E+ +KG +P + LI GL + EA ++ + K
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ + + LL C G+ +A + +G+D D + Y +L+ G + RK
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L+ EM D G PD Y S +D S
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 2/288 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YNVLI+G K ++ +A+G + +KPDVVT+ L+ G C+ ++F++ L + EM
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+P+ + ++L+ G K +E +N+ +++ G + L+D LC +GR
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC-KGRKF 383
Query: 313 KACELVID-FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
EL+ D + G+ P D Y L++ C G AL + E+ G SV +L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G + A G M +M+ + + P VT+ L+ C G+ A RL + KG+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P T+ L+SG R ++ L NEM + P+ TYN ++G
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 42/421 (9%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN--DGIFSCPEMERI-----F 157
F H +F ++ +L + F S+L + S+ + +FSC E ++ F
Sbjct: 100 FDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSF 159
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ +V++ R+ DG+L F+ M + P V + L++G VK R F A+ ++ MV
Sbjct: 160 DLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV 219
Query: 218 RDRVKPDV-----------------------------------VTFNILISGFCRNKKFD 242
++PDV V +N+LI G C+ +K
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+G+ +++ K P+VV++ TL+ G ++F+ G+ M EM+ L S LV
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GL G++ +A LV GV P F Y L++ LC A + D + K G
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ + + LI+ R K A + +M+ G+ +N L+ C G A+
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
K L+P +TY L+ GY + + + L +EM +G P + T+ + + GL
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 483 A 483
A
Sbjct: 520 A 520
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 21/419 (5%)
Query: 69 ITPSSLL---HFLKSKLHHHPQFTHYDFHIFAWASTID-SFRHDHTTFLFIVRSLASSYR 124
IT SLL L + LH +F H+ + + + R D + ++RSL
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 125 FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
S ++ + A C + P ++ ++ K ++ + + ++K +
Sbjct: 243 LSRAKEMIAHMEATGCD-----VNIVP-----YNVLIDGLCKKQKVWEAV----GIKKDL 288
Query: 185 DGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G+ P V Y L+ G K +EF+ L D M+ R P + L+ G + K
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ AL L + + + G +PN+ +N LI RKF E + M ++G + VT IL
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+D C G++ A + + G+ + Y L+ C G+ A + E+ K
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V+ T+L+ G K +A L +M +GI P TF LL L G DA +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + + P+ +TY++++ GY E + + EM ++G +PD +Y + GL
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 9/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ +A + D + F M + + +P+ YNV+I G+ + + KA F M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEW-NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD ++ LI G C + A + + C N + + L+ GF E K
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E +++ EM++ G + V +L+DG L+ + RG+ P D Y +
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G+ A + D + +G +P+ + T +I GL + EA L KM
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 397 LPDSVTFNCLLEDL----CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+P+ VT+ C L+ L D+ + V+ A KGL + TY++L+ G+ R+ R +
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHN----AILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E L+ M+ +G PD TY + ++ L
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINEL 832
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 2/281 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++GF + + ++AL MV+ V D+V + +LI G ++K L GL +EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ V + ++I F E + MI GC + VT +++GLC G V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A L +P Y ++ L GE + A+E+ + + K G L + L
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNML 793
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G R + EAS L+ +M+ +G+ PD +T+ ++ +LC A L + KG+
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
PD + Y+ L+ G + L NEML +G IP+ T
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 21/299 (7%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S + + +LI+ VK F A ++ +KP V FN+L S +
Sbjct: 103 STASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCY------------- 148
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCN 307
EK + SF+ LI+ + R+ +GV + MI V T L+ GL
Sbjct: 149 ----EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A EL D G+ P + Y G++ LC + A E++ + G +++
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR-TVDADRLRLLA 426
LI+GL + +K EA G+ + + + + PD VT+ L+ LC V + + + +
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ P LV G + + +E NLV ++D G P+L YN+ +D L RK
Sbjct: 325 CLR-FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+ + YN+LI GF + ++A RM+ D V PD +T+ +I+ CR A+ L
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+ M EKG P+ V++NTLI G + + + EM+ G
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 152/304 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ IY+++I G + + D+A+ M + P+ T+ I+ +G CR K+ + A
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM++ G P+ + + LI GF E DE + + M+ G + +T +L+ GLC
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ KA E++ G P + L+E C E N G ALE++DE+ K+ +PS ++
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+I GL + A+ L+EKM G+ P+ V ++ L+ GR +A RL S
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
G+ PD Y+ ++S ++ + +E + E+ G PD T+ +++ G S K
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560
Query: 488 RQTR 491
+
Sbjct: 561 EAAK 564
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 151/304 (49%), Gaps = 1/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ IYN L++G K + +A +D M ++PD VT++ +I G+C+++ A L
Sbjct: 681 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 740
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG P+ +N L+ G E ++ +N+ EM++ G ++++ L+DG C
Sbjct: 741 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCK 799
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ +A +L + + ++P Y +++ C G A + E+ ++ + +
Sbjct: 800 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L+ G +L + E L EKM+ +G+ PD VT+ ++ C V+A +LR
Sbjct: 860 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 919
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KG+ G + +L++ + E L++EM + G P LA N+ + A K
Sbjct: 920 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMD 979
Query: 488 RQTR 491
TR
Sbjct: 980 EATR 983
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 156/336 (46%), Gaps = 14/336 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKA 209
++ + A+ R+ E R+L+DG P + YN +I+ K + ++A
Sbjct: 475 VYSILIMAYASEGRI-------EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ + +KPD VTF I G+ + K A F EM + G PN + LI G
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F E +++ + LG TC + GL GRV +A ++ + +G++P
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F Y L+ C +G A E+ DE+ KG P++ L++GL + A L +
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M ++G+ PDSVT++ +++ C +A L +KG+ P Y+ LV G +E
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ NL EML +GF L ++N+ +DG + K
Sbjct: 768 DMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCK 802
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 36/317 (11%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+A RMN+ L FE M+K +P + + LI+GF++ + D+ L D MV +
Sbjct: 307 GLCRAKRMNEAKLTFEEMQK-TGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 365
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+++T+N+LI G C+ K + A + + M GC PN +F LI G+
Sbjct: 366 INLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGY------------ 413
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
C E + +A EL+ + +R ++P Y ++ LC
Sbjct: 414 -----------------------CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 450
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+ +A ++++++ G P+V+ + LI + EA L++ M G+ PD
Sbjct: 451 CKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N ++ L G+ +A L +GL PD +T+ + GY++ + E +EML
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 463 DEGFIPDLATYNSYMDG 479
D G +P+ Y ++G
Sbjct: 571 DHGLMPNNPLYTVLING 587
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V +Y++LI + ++A D M V PD+ +N +IS + K + A
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
E++ +G P+ V+F I G+ K E EM++ G ++ +L++G
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G +++A + GVLP + L G AL+V EL +KG +P V
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++LI G + + +A L ++M +GI P+ +N L++ LC G A +L
Sbjct: 650 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 709
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KGL+PD +TY ++ GY + E +L +EM +G P YN+ + G
Sbjct: 710 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 1/332 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C R F + + + + M L + M K + PS Y +ING C++
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLS 455
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A ++M +KP+VV ++ILI + + + A L M G P++ +N +I
Sbjct: 456 LANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 515
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
K +E E+ G + +VT + G G++ +A + + G++
Sbjct: 516 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y L+ GN AL + L G LP V C+ I GL + + EA +
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 635
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ ++G++PD T++ L+ C G A L KG+ P+ Y+ LV G +
Sbjct: 636 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + M ++G PD TY++ +DG
Sbjct: 696 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L+ +KC + Y+ M+ ++ DV T+ L+ C+ A + EM E
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
KG NPN ++ ++++G+C G + +
Sbjct: 257 KGLNPNEFIYS-----------------------------------LVIEGMCQVGDIDE 281
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL +G++P + Y + LC A +E+ K G P AC+ LI+
Sbjct: 282 AVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALID 341
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G R E + + M+ GI + +T+N L+ LC G+ A + T G P
Sbjct: 342 GFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP 401
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ T+ +L+ GY RE+ L++EM +P +Y + ++GL + +
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 1/276 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P +YN L++G K + +KA+ + M++ ++FN LI G+C++ K A
Sbjct: 750 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQ 808
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM K P+ V++ T+I K +E + EM E +VT L+ G
Sbjct: 809 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 868
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ + L +GV P + Y ++ C E N A ++ DE+ KG L
Sbjct: 869 KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGT 928
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI L + EAS L+++M + G+ P N L+ + G+ +A R+
Sbjct: 929 IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGV 988
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ GL PD T LV+G + ++ NL+ +++
Sbjct: 989 KSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ V+ K M + F M L G + +N LI+G+ K + +A +
Sbjct: 755 VYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQE 812
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++ PD VT+ +I C+ K + A LF+EM+E+ + V++ +L+ G+ +
Sbjct: 813 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 872
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + +M+ G + VT +++ C E +++A +L + +G+L K +
Sbjct: 873 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 932
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC + A +++DE+ + G PS+ AC TL+ K EA+ + E + G
Sbjct: 933 LITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG 992
Query: 396 ILPDSVTF 403
++PD+ T
Sbjct: 993 LVPDTTTL 1000
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLK--EGILP-----DSVTFNCLLEDLCDVG 414
L S+I C +L++ L + G+ME K G+L D T+ L+ LC G
Sbjct: 190 LISLIRCNSLLKDLLK-------CGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTG 242
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A R+ + KGL+P+ Y +++ G + E L M ++G +P+ TY
Sbjct: 243 DLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYT 302
Query: 475 SYMDGLSNARK 485
GL A++
Sbjct: 303 IITAGLCRAKR 313
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 9/326 (2%)
Query: 163 AFVKANRMNDGLLAFEAMRKLID------GR---PSVSIYNVLINGFVKCREFDKALGFY 213
A N + DGL+ + ++ + GR PSV YN LIN + KA +
Sbjct: 137 ALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVW 196
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D+MV R+ P+VVT+ +I C A GLF EM+E G PN+ ++N L+ F
Sbjct: 197 DQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKR 256
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ Y++++ G + V L+DGLC R+ +A + +D R V P Y
Sbjct: 257 DNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVY 316
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ G A AL E+ +KG P C+ ++ GL + A+ +E M +
Sbjct: 317 NSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQ 376
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
GI ++ +N L+++ C G +A S G++P+ +TY L+ G+++ +
Sbjct: 377 SGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEI 436
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+ EM+ +G P++ TY + + G
Sbjct: 437 AMAIYTEMVAKGVEPNVVTYTALIHG 462
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 127/274 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ YN L++ K AL FY +++ + P+ V F LI G C+ + A
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKN 299
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M P V +N+LI G F E + E+I G TC I+V GLC
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC 359
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G++ A + + G+ Y L+++ C GN AL + + G P+V+
Sbjct: 360 DGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVV 419
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++LI+G + + A + +M+ +G+ P+ VT+ L+ G A L+
Sbjct: 420 TYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEM 479
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
KG+ + +T +LV G RENR ++ + E
Sbjct: 480 EEKGIYSNAITVSVLVDGLCRENRVQDAVRFIME 513
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ + YNVLI+ + K D+AL RM V+P+VVT++ LI G +N + ++A+ ++
Sbjct: 382 NAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIY 441
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM KG PNVV++ LI G D + EM E G +++T +LVDGLC E
Sbjct: 442 TEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRE 501
Query: 309 GRVLKACELVIDFS------RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
RV A ++++S + + Y L+ L +G A + G +
Sbjct: 502 NRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMV 561
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
P T +I GL L + A L M+K G+ P C
Sbjct: 562 PDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCAMVC 604
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 3/265 (1%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+L+ + D AL +F +RE P + + N ++ G + EM
Sbjct: 108 ALGVLVIALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEM 164
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ G S VT L++ ++G V KA E+ R + P Y ++ LC E
Sbjct: 165 LGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCI 224
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
G A + E+ + G P++ L+ + A +LK G++P+ V F L
Sbjct: 225 GDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTL 284
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ LC R +A + L + P Y+ L+ G R +E E++ +G
Sbjct: 285 IDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGL 344
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
PD T + + GL + + TR
Sbjct: 345 RPDEFTCSIVVRGLCDGGQMQVATR 369
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 137/298 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ LI + K R+ + A + M +VVT+N LI G CR + A G
Sbjct: 241 PDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGY 300
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM + G P+ ++ +I G + D+ + EM G + V L+DG
Sbjct: 301 KKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G +A ++V + S GV P Y L+ LC G G A ++ ++ K G + +
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG R EA L+ +M K GI P+ T++ ++ LC +G + A L
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL P+ Y L+SGY RE + +M E PDL YNS + GLSN K
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 162/363 (44%), Gaps = 38/363 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + ++ + + L MRK G P+V Y+++ING + E ++A G ++
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRK--GGISPNVYTYSIIINGLCQIGESERASGLLEQ 478
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ D +KP+ + LISG+CR F LA ++M + P++ +N+LI G K
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + EM+E G + + T L+ G G + KA +L+ G+ P DF Y
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598
Query: 336 LVE-----------------------------------KLCGEGNAGIALEVVDELWKKG 360
++E L G+ A+ V+ + K G
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+P + +LI G + +A GL+++M K+GI P +N L++ C A
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ KGL P+ +TY L+ GY + ++ +L NEML EG PD Y+ G
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGC 778
Query: 481 SNA 483
SN+
Sbjct: 779 SNS 781
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 127/240 (52%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M G +P+V +++TLI + R + + EM E GC + VT L+ GLC G
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A + G++P F Y ++ LC G A ++DE+ G +P+V+ +T
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G R EA ++++M G+ P+ +T++ L+ LC +GR A R+ + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
D MTY++++ G+ R++ ++E L+NEM G P++ TY+ ++GL +S R +
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 146/296 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +Y+ LI+GF++ D+A M V+P+ +T++ LI G C+ + A +
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M + G + +++N +I G + +E + EM + G + T I+++GLC
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQ 465
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +A L+ G+ P F Y L+ C EG+ +A E + ++ ++ P +
Sbjct: 466 IGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYC 525
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+LI GL + K EA ++ML++G P+ T+ L+ G A++L
Sbjct: 526 YNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML 585
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL+P+ Y ++ GY + + ++ + + ML++G +PD Y + LS++
Sbjct: 586 NSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y +ING K D+A D M + P+VV ++ LI GF R D A +
Sbjct: 311 PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKI 370
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM G PN ++++ LIRG + + +M ++G ++T ++++G
Sbjct: 371 VKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLR 430
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ + + G+ P + Y ++ LC G + A +++++ G P+
Sbjct: 431 QHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV 490
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G R A ++KM +E + PD +N L+ L +VG+ +A
Sbjct: 491 YAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEML 550
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG P+ TY L+ GY+ ++ E L+++ML+ G P+ Y ++G
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 175 LAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E ++K+ + P + YN LI G + D+A+ +YD M+ +P+ T+ LI
Sbjct: 506 LACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLI 565
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G+ + A L +M G NPN + ++ G+F ++ + M+E G
Sbjct: 566 HGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLM 625
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ I++ L + G + A ++ + G++P Y L+ C + A+ +
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGL 685
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+DE+ KKG P + LI+G + A + ++ +G+ P+ VT+ L++ C
Sbjct: 686 LDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCK 745
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G DA L T+G+ PD Y +L +G + ++ + EM+ G+ +++
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY-AIISS 804
Query: 473 YNSYMDGLSNARKSVRQT 490
+N+ + G R +++T
Sbjct: 805 FNTLVHGFCK-RGKLQET 821
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 159/361 (44%), Gaps = 40/361 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
++ ++ F++ ++ AF+ ++++ +P+ Y+ LI G K +A
Sbjct: 350 VYSTLIDGFMRQGNADE---AFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M + D +T+N++I G R + A L EMR+ G +PNV +++ +I G
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQI 466
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE----------------- 316
+ + + +MI G + ++ L+ G C EG ACE
Sbjct: 467 GESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCY 526
Query: 317 --LVIDFS----------------RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+I S +G P DF Y GL+ GN A +++ ++
Sbjct: 527 NSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN 586
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+ ++EG + + S ++ ML++G++PD+ + ++ +L G
Sbjct: 587 SGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQA 646
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + + GL PD + Y L+SG+ + ++ L++EM +G P ++ YN+ +D
Sbjct: 647 AVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALID 706
Query: 479 G 479
G
Sbjct: 707 G 707
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 1/232 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y ++I+ A+ + ++ + PD + + LISGFC+ + A+GL
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGL 685
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +KG P + +N LI GF N+ +I G + VT L+DG C
Sbjct: 686 LDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCK 745
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A +L + GV P F Y L G+ AL + +E+ +G + +
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG-YAIISS 804
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
TL+ G + K E + M+ + I+P +T ++ L + G+ +A
Sbjct: 805 FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEA 856
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P + Y L+E C + A +VV+E+ + G +V+ TLI GL R EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
G ++M G++PD T+ ++ LC GR A L S GL P+ + Y L+ G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ R+ E +V EM G P+ TY++ + GL + R +R
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASR 404
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 66/307 (21%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ + ++ +L+SS SVL+ I N G+ P+ I+ ++ F KA
Sbjct: 627 DNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN-------GLV--PD-SLIYGSLISGFCKA 676
Query: 168 NRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
M + L E +K I+ P +S YN LI+GF K + A ++ ++ + P+ V
Sbjct: 677 ADMEKAVGLLDEMAKKGIE--PGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPN--------------------------- 259
T+ LI G+C+ A+ L+ EM +G P+
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794
Query: 260 -------VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ SFNTL+ GF K E V + M++ S +T E +V GL G++
Sbjct: 795 IARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS 854
Query: 313 KACELVIDFSRRGVLPKDFDYFG-------------------LVEKLCGEGNAGIALEVV 353
+A + ++ ++ +D D+ +++ C +G AL +
Sbjct: 855 EAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDKALMLH 914
Query: 354 DELWKKG 360
D L KG
Sbjct: 915 DALVAKG 921
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 143/319 (44%), Gaps = 1/319 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + KA + + LL F +R P+V YN+LI+G+ + + ++A + MV
Sbjct: 385 LNGYCKAGSLKEALLLFGDLRH-AGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDV T+ IL+ G +A F EM KG P+ ++NT IR +
Sbjct: 444 CLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAF 503
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M+ G +VT IL+DGLC G + A +L + G+ P Y L+
Sbjct: 504 RLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAH 563
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A + ++ G PS + T I R A G KML+EG+ P+
Sbjct: 564 CERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 623
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+N L+ LC GRT A R +GL P+ TY +L+ G +E ++ E
Sbjct: 624 ITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFE 683
Query: 461 MLDEGFIPDLATYNSYMDG 479
M G PD T+ + G
Sbjct: 684 MHQNGIHPDYLTHKALFKG 702
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 2/317 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + + + E MR + + S YN LI G + KA M +
Sbjct: 281 ITGLARKGDLEEAAEMVEGMR--LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEG 338
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P VVT+N +I G ++ + + A F EMR G P+V+++N+L+ G+ E +
Sbjct: 339 IMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEAL 398
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ ++ G + +T IL+DG C G + +A L + +G LP Y L++
Sbjct: 399 LLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGS 458
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ +A E DE+ KG P A T I L +A L E M+ EGI D+
Sbjct: 459 HNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDT 518
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ LC G DA L++ GL PD +TY L+ + +E +
Sbjct: 519 VTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKD 578
Query: 461 MLDEGFIPDLATYNSYM 477
M+ +G P TY ++
Sbjct: 579 MISDGLAPSAVTYTVFI 595
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +I+G ++ + + A + M ++PDV+T+N L++G+C+ AL L
Sbjct: 341 PTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLL 400
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++R G P V+++N LI G+ +E + EM+E GC T IL+ G N
Sbjct: 401 FGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHN 460
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ A E + +G+ P F Y + G A + + + +G +
Sbjct: 461 ACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVT 520
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+GL + +A L KM+ G+ PD +T+ CL+ C+ G +A +
Sbjct: 521 YNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ GL P +TY + + Y R +ML+EG P+ TYN + L
Sbjct: 581 SDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 3/276 (1%)
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L + M V PDV N ++ ++D + EM + G P++V++NTL+
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246
Query: 270 FFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
F E + D+ + EM G C + VT +++ GL +G + +A E+V + R
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMV-EGMRLSKK 305
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
F Y L+ L +G A ++ E+ +G +P+V+ +I GL + + A
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+M G+ PD +T+N LL C G +A L GL P +TY+IL+ GY R
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+E L EM+++G +PD+ TY M G NA
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNA 461
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 3/290 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V N ++ +D + M++ ++P +VT+N L+ F + + D L
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAML 259
Query: 248 FREM--REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+EM R GC PN V+ N +I G + +E M E + L + SS T L+ GL
Sbjct: 260 LKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMV-EGMRLSKKASSFTYNPLITGL 318
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+G V KA +L ++ G++P Y ++ L G A E+ G P V
Sbjct: 319 LAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDV 378
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +L+ G + EA L + G+ P +T+N L++ C +G +A RL+
Sbjct: 379 ITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 438
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+G PD TY IL+ G +EML +G PD YN+
Sbjct: 439 MVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 139/339 (41%), Gaps = 36/339 (10%)
Query: 172 DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR--DRVKPDVVTFN 229
D + A A + PS+ YN L++ F+K DK M P+ VT N
Sbjct: 219 DDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHN 278
Query: 230 ILISGFCRNKKFD---------------------------LALGLFR-------EMREKG 255
++I+G R + LA G + EM +G
Sbjct: 279 VVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEG 338
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P VV++N +I G + + EM +G + +T L++G C G + +A
Sbjct: 339 IMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEAL 398
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L D G+ P Y L++ C G+ A + +E+ ++G LP V T L++G
Sbjct: 399 LLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGS 458
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
A ++ML +G+ PD +N + +G A RLR + +G+ D
Sbjct: 459 HNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDT 518
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+TY+IL+ G + + ++L +M+ G PD TY
Sbjct: 519 VTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYT 557
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 120/244 (49%), Gaps = 13/244 (5%)
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
L L F EM G P+V N ++R ++D+ + EM++LG E S VT L+
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244
Query: 303 DGLCNEGRVLKACELVIDFSRRG--VLPKDFDYFGLVEKLCGEGNAGIALEVVD--ELWK 358
D EGR K L+ + RG LP D + ++ L +G+ A E+V+ L K
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K S LI GL L KG +A L +M EGI+P VT+N ++ L G+
Sbjct: 305 KA---SSFTYNPLITGL--LAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ- 358
Query: 417 VDADRLRLLA-STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
V+A +++ + GL PD +TY+ L++GY + KE L ++ G P + TYN
Sbjct: 359 VEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNI 418
Query: 476 YMDG 479
+DG
Sbjct: 419 LIDG 422
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+ RK+++ P+ YNVLI+ + A + M+ + P+ T+ +LI
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG-VNMAYEMIE 288
G C+ ++ A+ + EM + G +P+ ++ L +G FDEG +N A E +E
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG------FDEGHMNHAIEYLE 716
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 188/412 (45%), Gaps = 44/412 (10%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFHFA--VN 162
++ ++ L + FSE S++ + + S +F+ + I+ F+ +
Sbjct: 3 SYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 62
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + R+ P + VL +K R F GFY+ ++
Sbjct: 63 AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL-EHLMKLRYFKLVWGFYEEILECGYP 121
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+ DEG +
Sbjct: 122 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ G + T +L++GLC E ++ A EL + +G++P + L++ C
Sbjct: 182 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G +A+E+ ++ + LP +I TLI GL + +A GL+++M +G+ PD T
Sbjct: 242 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 301
Query: 403 FNCLLE-----------------------------------DLCDVGRTVDADRLRLLAS 427
+ L++ LC GR VDA+++
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL PD TY ++++ + ++ +G L+ EM G +P + TYN M+G
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 130 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 189
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 249
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 250 EIYKQMLSQSLLPDLITYNTLIYGL 274
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +LR G E++L+ G FN L+ C G A +
Sbjct: 91 TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 150
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 151 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 209
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 180/386 (46%), Gaps = 15/386 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA +RHD + ++ L+ + VL + GI+ PE
Sbjct: 194 FYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRR-------GIYRTPE--- 243
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + ++ +A ++ D L M++ P++ I N I+ FV+ +KAL F +R
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQR-AGVEPNLLICNTTIDVFVRANRLEKALRFLER 302
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VVT+N +I G+C + + A+ L +M KGC P+ VS+ T++ E++
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362
Query: 276 FDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E ++ +M E G VT L+ L +A + D +G Y
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V LC EG A ++++E+ P V+ T ++ G RL + +A L++ M
Sbjct: 423 AIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 479
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P++V++ LL +C G++++A + ++ P+ +TY +++ G RE + E
Sbjct: 480 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 539
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
++V EM+ +GF P N + L
Sbjct: 540 CDVVREMVLKGFFPGPVEINLLLQSL 565
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 6/323 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+A K RM++ M D P V Y ++NGF + E DKA M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEM----DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 476
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KP+ V++ L++G CR K A + E +PN ++++ ++ G E K
Sbjct: 477 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 536
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E ++ EM+ G V +L+ LC +GR +A + + + +G ++ +
Sbjct: 537 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 596
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C AL V+D+++ V TTL++ L + + EA+ LM+KML +GI
Sbjct: 597 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 656
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P VT+ ++ C +G+ VD D + +L Y+ ++ + +E +
Sbjct: 657 DPTPVTYRTVIHRYCQMGK-VD-DLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADT 714
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L+ ++L D T + M+G
Sbjct: 715 LLGKVLRTASRSDAKTCYALMEG 737
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
F+ ++ + R + AL + M+ G PN++ NT I F + ++ + M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+G + VT ++ G C+ RV +A EL+ D +G LP Y+ ++ LC E
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 347 GIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+++ ++ K+ G +P + TLI L + EA ++ ++G D + ++
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
++ LC GR +A + L + PD +TY +V+G+ R + + L+ M G
Sbjct: 424 IVHALCKEGRMSEA---KDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 480
Query: 466 FIPDLATYNSYMDGLSNARKSV 487
P+ +Y + ++G+ KS+
Sbjct: 481 HKPNTVSYTALLNGMCRTGKSL 502
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 165/435 (37%), Gaps = 72/435 (16%)
Query: 55 RFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLF 114
+ K H L P +Q+T ++L+H L H H + F + FR D +
Sbjct: 372 KMAKEHGLVP--DQVTYNTLIHMLTK--HDHADEALW----FLKDAQEKGFRIDKLGYSA 423
Query: 115 IVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIFH--- 158
IV +L R SE ++N + CP C + ++ ++ H
Sbjct: 424 IVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 480
Query: 159 -----FAVNAFVKAN-RMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKAL 210
+ A + R L A E M + P+ Y+V+++G + + +A
Sbjct: 481 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 540
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
MV P V N+L+ CR+ + A E KGC NVV+F T+I GF
Sbjct: 541 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 600
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ D +++ +M + T LVD L +GR+ +A EL+ +G+ P
Sbjct: 601 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 660
Query: 331 FDYF---------------------------------GLVEKLCGEGNAGIALEVVDELW 357
Y ++EKLC G A ++ ++
Sbjct: 661 VTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVL 720
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ + C L+EG L+KGV A + +M ++PD L + L G+
Sbjct: 721 RTASRSDAKTCYALMEGY--LKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGK 778
Query: 416 TVDADRLRLLASTKG 430
+AD+L L +G
Sbjct: 779 VDEADKLMLRLVERG 793
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 194/431 (45%), Gaps = 44/431 (10%)
Query: 93 FHIFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
F F W S+ +FRH ++ ++ L + FSE S++ + + S +F+
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 151 ------PEMERIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID----- 185
+ I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 186 ----------------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
G P S+ +N+L++ F K + A +D + + ++P V ++
Sbjct: 121 RYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSY 180
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L++G+ R D L M G P+V +++ LI G E D+ + EM+
Sbjct: 181 NTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLX 240
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G +SVT L+DG C GRV A E+ + + P Y L LC +G+
Sbjct: 241 KGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQ 300
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A ++DE+ KG P TTLI+G + A ++M++E I D V + L+
Sbjct: 301 AHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALIS 360
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR+ DA+++ + GL PD TY ++++ + ++ +G + EM G +P
Sbjct: 361 GLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVP 420
Query: 469 DLATYNSYMDG 479
+ TYN M+G
Sbjct: 421 XVVTYNVLMNG 431
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G P V + TL+ G RL E L M G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXASG 207
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ L D + L KGL P+ +T+ L+ G+ + R
Sbjct: 208 VQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAM 267
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + PD TYN+ GL
Sbjct: 268 EIYKQMLSQXLXPDFITYNTLXYGL 292
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 150/306 (49%), Gaps = 6/306 (1%)
Query: 181 RKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
RK+ D +P+ + Y L++G+ K D MVR+ ++PD FNILI
Sbjct: 328 RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+ ++ K D A+ LF +MR +G NP+ V++ ++ K D+ + +I G
Sbjct: 388 YTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPD 447
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+V L+ GLC + KA EL ++ RG+ P + + L+ LC EG A + D
Sbjct: 448 AVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFD 507
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ + VI TLI+G K EA+ L+E M+ +G+ P+ VT+N ++ C G
Sbjct: 508 LMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNG 567
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R DA L ++KG++P +TY ++ G + R + L M+ G D+ TYN
Sbjct: 568 RIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYN 627
Query: 475 SYMDGL 480
+ GL
Sbjct: 628 IILLGL 633
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 7/328 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ + + K +++D +L F MR+ G P Y ++++ + D A+ +
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKMRR--QGLNPDTVTYGIVMDALCMVGKVDDAMAQFG 437
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
R++ + + PD V F LI G C K+D A L EM +G PN + FNTL+ E
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
N+ M+ + + +T L+DG C G+V +A +L+ GV P + Y
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C G A + ++ KG P ++ +T+++GL + R+ A L M+K
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKS 617
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD--PDGMTYHILVSGYTRENRRK 452
GI D T+N +L LC T DA LR+ + +D + T++I++ + R
Sbjct: 618 GIKFDIGTYNIILLGLCQNNCTDDA--LRIFQNLYLIDFHLENRTFNIMIDALLKGGRHD 675
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E ++L +L G +P++ TY M L
Sbjct: 676 EAKDLFASLLARGLVPNVVTYWLMMKSL 703
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 150/323 (46%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++A KA M+ + M K P+ +N L++G+ + + A+G + RM
Sbjct: 241 YNSIISALSKARAMDKAAVVLVRMVK-NGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRM 299
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
RD V+PDV T+N L+ C+N + A +F M ++G PN ++ TL+ G+ E
Sbjct: 300 CRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSL 359
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ ++ M+ G + IL+ G+V A L R+G+ P Y +
Sbjct: 360 VKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIV 419
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC G A+ L +G P + LI GL K +A L +M+ GI
Sbjct: 420 MDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGI 479
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+++ FN LL LC G A + L + D +TY+ L+ GY + E
Sbjct: 480 CPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAK 539
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L+ M+ +G P+ TYN+ ++G
Sbjct: 540 LLEGMVLDGVKPNEVTYNTMING 562
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 143/299 (47%), Gaps = 6/299 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGF-YDRMVRDRVK----PDVVTFNILISGFCR-NKKF 241
P+V Y +L+ G +AL + MV D + PDVV++N +I+G R ++
Sbjct: 160 PNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQL 219
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D A LF +M ++G +P+VV++N++I R D+ + M++ G + +T L
Sbjct: 220 DTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSL 279
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ G C+ G+ A + R GV P F Y L+ LC G + A ++ D + K+G+
Sbjct: 280 LHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH 339
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+ TL+ G V+ L++ M++ GI PD FN L+ G+ DA
Sbjct: 340 KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAML 399
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L +GL+PD +TY I++ + + ++ EG PD + + + GL
Sbjct: 400 LFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 209 ALGFYDRMV---RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A+ + RMV R +V P+++T++++I R DLA + G ++F+
Sbjct: 72 AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131
Query: 266 LIRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACEL-----VI 319
L++ +++ E +++A M LGC + + IL+ GLC+E R +A L V
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNA-GIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
D +R G P Y ++ L EG A + D++ +G P V+ ++I L +
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
R +A+ ++ +M+K G +P+ +T N LL C G+ DA + G++PD TY
Sbjct: 252 RAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTY 311
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L+ + R E + + M+ G P+ ATY + + G +
Sbjct: 312 NTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYA 354
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 7/294 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ Y+V+I+ + D A R++R + +TF+ L+ C K+ A+ +
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148
Query: 248 -FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL-----GCEFSSVTCEIL 301
R M GC PNV S+ L++G E + + +++ + M+ G V+ +
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208
Query: 302 VDGLCNEGRVL-KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++GL EGR L A L +G+ P Y ++ L A V+ + K G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+P+ I +L+ G K +A G+ ++M ++G+ PD T+N L+ LC GR+++A
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
++ +G P+ TY L+ GY E + +L++ M+ G PD +N
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFN 382
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 73/245 (29%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
+D + V YN LI+G+ + D+A + MV D VKP+ VT+N +I+G+C+N + +
Sbjct: 512 VDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIED 571
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A LFR+M KG NP +V+++T+++G F R+ + MI+ G +F T I++
Sbjct: 572 AFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILL 631
Query: 304 GLCNE-----------------------------------GRVLKACELVIDFSRRGVLP 328
GLC GR +A +L RG++P
Sbjct: 632 GLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Query: 329 KDFDYF-----------------------------------GLVEKLCGEG---NAGIAL 350
Y+ LV KL +G AG+ L
Sbjct: 692 NVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYL 751
Query: 351 EVVDE 355
+DE
Sbjct: 752 SKIDE 756
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ + ++++ E M ++DG +P+ YN +ING+ K + A + +
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGM--VLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V P +VT++ ++ G + ++ A L+ M + G ++ ++N ++ G
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + + + + + T I++D L GR +A +L RG++P Y+
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWL 698
Query: 336 LVEKLCGEGNAGIALEVVDELWKKG 360
+++ L +G ++ L K G
Sbjct: 699 MMKSLIEQGLLEELDDLFLSLEKNG 723
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 327 LPKDFDYFGLVEKLCGE-GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P + + +V C G+ +A + + + G I + L++ L ++ EA
Sbjct: 87 VPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAM 146
Query: 386 GL-MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST-------KGLDPDGMT 437
+ + +M G P+ ++ LL+ LCD R+ A L LL + G PD ++
Sbjct: 147 DIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQA--LHLLHTMMVADDTRGGYPPDVVS 204
Query: 438 YHILVSGYTRENRRKE-GENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
Y+ +++G RE R+ + +L ++MLD+G PD+ TYNS + LS AR
Sbjct: 205 YNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKAR 252
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K + A ++ + + ++P VV+FN L++G+ R D
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM++ G + VT L+DG
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + + P Y L+ LC +G+ A +++DE+ KG P
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M++E I D V + L+ LC GR +DA+++
Sbjct: 300 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLR 359
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL PD TY ++++ + ++ G L+ EM +G +P + TYN M+G
Sbjct: 360 EMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 9/372 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFHFA--VN 162
++ ++ L + SE S++ + + S +F+ + I+ F+ +
Sbjct: 4 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 63
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + R+ P + VL +K + F GFY+ ++
Sbjct: 64 AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHMMKLKYFKLVWGFYEEILECGYP 122
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC+ +A +F + + G P+VVSFNTL+ G+ DEG +
Sbjct: 123 ASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 182
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M G + T +L++GLC E ++ A EL + +G++P + L++ C
Sbjct: 183 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 242
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G +A+E+ ++ + P +I TLI GL + +A L+++M +G+ PD +T
Sbjct: 243 SGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 302
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L++ C G A R + + D + Y L+SG +E R + E ++ EML
Sbjct: 303 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 362
Query: 463 DEGFIPDLATYN 474
G PD TY
Sbjct: 363 SAGLKPDTGTYT 374
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 5/220 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N K ++M+D F+ M + L+ P+ + LI+G K D A+ Y
Sbjct: 198 YSVLINGLCKESKMDDANELFDEMLDKGLV---PNGVTFTTLIDGHCKSGRVDLAMEIYK 254
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ + PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 255 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEG 314
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ MI+ V L+ GLC EGR L A +++ + G+ P Y
Sbjct: 315 DLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYT 374
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ +++ E+ + G++PSV+ L+ G
Sbjct: 375 MIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 52 RSDIYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHMMKLKYFKL 108
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 109 VWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMN 168
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K +A+ L ++ML +G++P
Sbjct: 169 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVP 228
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L+
Sbjct: 229 NGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLI 288
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM +G PD TY + +DG
Sbjct: 289 DEMSMKGLKPDKITYTTLIDG 309
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C EG+ +A V + + K G PSV++ TL+ G RL E L M G
Sbjct: 131 LMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 190
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 191 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAM 250
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + PDL TYN+ + GL
Sbjct: 251 EIYKQMLSQSLSPDLITYNTLIYGL 275
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E + +L+ G E++L+ G FN L+ C G A +
Sbjct: 92 TCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAI 151
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++++ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 152 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 210
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVR 218
+++ K +ND AF+ +++ R S +I Y+ LI+GF + A+G +++M
Sbjct: 217 IDSMCKDKNVND---AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ + PDV TFNIL+ FC+ + A M ++G P++V++N+L+ G+ + +
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNM 333
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ M G + + I+++G C V +A +L + + + P Y L++
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G ALE++D + +G P +I +++++ L + +A L+ K+ +GI P
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ T+ L++ LC GR DA + KG + TY +++ G+ E +L+
Sbjct: 454 NMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513
Query: 459 NEMLDEGFIPDLATY 473
++M D IPD TY
Sbjct: 514 SKMKDNSCIPDAITY 528
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 140/288 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K E AL R+ V+ DVV ++ +I C++K + A L+ EM
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ + N+V+++ LI GF K + + + +M T ILVD C EGRV
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + ++G+ P Y L++ C +A +++ + +G +V + +I
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++ +A L ++M + I P+ +T+N L++ LC GR A L L +G
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD +TY ++ + + + L+ ++ D+G P++ TY +DGL
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 5/318 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F ++ D + F M + P V +N+L++ F K +A M++
Sbjct: 252 ISGFCIVGKLKDAIGLFNKMTSE-NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KPD+VT+N L+ G+C + ++A + M +G V S+N +I GF + D+ +
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM + +T L+DGLC GR+ A EL+ RG P Y +++ L
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A+ ++ +L +G P++ T LI+GL + + +A + E +L +G
Sbjct: 431 CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTV 490
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGENLV 458
T+ +++ C G +A L LL+ K PD +TY I++ ++ + E L+
Sbjct: 491 NTYTVMIQGFCSHGLFDEA--LSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLL 548
Query: 459 NEMLDEGFIPDLATYNSY 476
EM+ G + Y S+
Sbjct: 549 REMITRGLLYSFLEYGSW 566
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 148/328 (45%), Gaps = 9/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLL--AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGF 212
F+ +N F + GL+ AF + K++ P N I GF + +AL F
Sbjct: 108 FNILINCFCQL-----GLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D++V D V++ LI+G C+ + AL L R + K +VV ++T+I
Sbjct: 163 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCK 222
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
++ ++ ++ EM+ + VT L+ G C G++ A L + + P +
Sbjct: 223 DKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYT 282
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ LV+ C EG A + + K+G P ++ +L++G + + A ++ M
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G+ ++N ++ C + A +L K + P+ +TY+ L+ G + R
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRIS 402
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
L++ M D G PD+ TY+S +D L
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDAL 430
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 146/332 (43%), Gaps = 45/332 (13%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+V YN++INGF K + D+A+ + M ++ P+V+T+N LI G C++ + AL L
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G P+++++++++ D+ + + ++ + G + T IL+DGLC
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A + D +G Y +++ C G AL ++ ++ +P I
Sbjct: 468 GGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAIT 527
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPD-------SVTF-------------NC-- 405
+I L + +A L+ +M+ G+L S++F C
Sbjct: 528 YEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTS 587
Query: 406 ----------LLEDL-CDVGRTVDADRLR-------LLAST-----KGLDPDGMTYHILV 442
LLE + CD T R + ++ ST +G D TY +++
Sbjct: 588 SQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMI 647
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
G+ E L+++M G IPD TY+
Sbjct: 648 QGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 142/306 (46%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+ ++++I RP+V IY LI F++ F A+ M + PD+ +N LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + K+ D A EM E G PN ++ I G+ +F EM E G
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V C L++ C + +V++AC +G+L Y L+ L A E+
Sbjct: 556 NKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG P V + LI G +L +AS + ++M++EG+ P+ + +N LL C
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L S KGL P+ +TY ++ GY + E L +EM +G +PD Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 474 NSYMDG 479
+ +DG
Sbjct: 736 TTLVDG 741
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 13/318 (4%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA + DG++A LI P Y LI G+ CRE + G Y+ +V + + V
Sbjct: 365 KAKALFDGMIA----SGLI---PQAQAYASLIEGY--CREKNVRQG-YELLVEMKKRNIV 414
Query: 226 V---TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ T+ ++ G C + D A + +EM GC PNVV + TLI+ F +F + + +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM E G L+ GL R+ +A +++ G+ P F Y +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A + V E+ + G LP+ + CT LI + K +EA M+ +GIL D+ T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKT 594
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L+ L + DA+ + KG+ PD +Y +L++G+++ ++ ++ +EM+
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 463 DEGFIPDLATYNSYMDGL 480
+EG P++ YN + G
Sbjct: 655 EEGLTPNVIIYNMLLGGF 672
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 3/295 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ + F++ +R D + + M++ G P + YN LI G K + D+A F
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV + +KP+ T+ ISG+ +F A +EMRE G PN V LI + +
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K E + M++ G + T +L++GL +V A E+ + +G+ P F Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ GN A + DE+ ++G P+VI L+ G R + +A L+++M +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
G+ P++VT+ +++ C G +A RL KGL PD Y LV G R N
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 50/364 (13%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALG 211
+ + +N K ++++D F MR G+ P V Y VLINGF K KA
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMR----GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+D MV + + P+V+ +N+L+ GFCR+ + + A L EM KG +PN V++ T+I G+
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL-------------- 317
E + EM G S LVDG C V +A +
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 318 -------VIDFSR--------RGVLPKDFDYFG---------LVEKLCGEGNAGIALEVV 353
V F + ++ FD FG +++ LC EGN A E+
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ +P+VI T+L+ G ++ + E + ++ + GI PD + ++ ++
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHI-----LVSGYTRENRRKEGENLVNEMLDEGFIP 468
G T A L K DG I L+SG+ + + E ++ M+ +IP
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 469 DLAT 472
D AT
Sbjct: 949 DSAT 952
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+VLI+G K + + A M V D T+++LI G + + D A GL EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G N ++ I E ++ + MI G + L++G C E V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ EL+++ +R ++ + Y +V+ +C G+ A +V E+ G P+V+ TTLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ + + +A ++++M ++GI PD +N L+ L R +A + GL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
P+ TY +SGY + + V EM + G +P+
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 141/347 (40%), Gaps = 84/347 (24%)
Query: 156 IFHFAV--NAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+F + V N F K M F+ M + +G P+V IYN+L+ GF + E +KA
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG--- 269
D M + P+ VT+ +I G+C++ A LF EM+ KG P+ + TL+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 270 ---------FFGERK---------FDEGVNMAYEM--IELGCEF---------------S 294
FG K F+ +N ++ EL E +
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 295 SVTCEILVDGLCNEGRVLKACEL------------VIDFS----------RR-------- 324
VT I++D LC EG + A EL VI ++ RR
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 325 -----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-----GNLPSVIACTTLIEG 374
G+ P Y ++ EG AL +VD+++ K G S+ C L+ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDAD 420
++ + A +ME M++ +PDS T L+ + C + V+AD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEAD 971
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 175 LAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
L E + +L+DG +P+ YN++I+ K + A + +M + P V+T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-- 286
L++G+ + + +F E G P+ + ++ +I F E + + + +M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 287 ---IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ GC+ S TC L+ G G + A +++ + R +P L+ + C
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Query: 344 GNAGIALEVV 353
N + + V
Sbjct: 964 SNQRVEADAV 973
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 194/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH+ ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + L ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGL 286
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + + R+ P + VL +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVL-EHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ + L+ +F +R+ G P+VVSFNTL+ G+
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIR 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D+G + M G + T +L++GLC E ++ +A EL + +G++P
Sbjct: 184 QGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ + P +I TLI GL + +A L+ +M
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D + Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G PD TY
Sbjct: 364 DAEKMLREMLSVGLKPDSGTYT 385
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 144/285 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
S+ +N+L++ F K E + +D + + ++P VV+FN L++G+ R D L
Sbjct: 134 ASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRL 193
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G P+V +++ LI G E K DE + EM++ G + VT L+DG C
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V A E+ + + P Y L+ LC +G+ A +++E+ KG P I
Sbjct: 254 NGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKIT 313
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 314 YTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ GL PD TY ++++ + ++ G L+ EM +G +P + T
Sbjct: 374 SVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N +++ ++ G AM +P V Y+VLING K + D+A + M
Sbjct: 174 FNTLMNGYIRQGDLDKGFRLKSAMHA-SGVQPDVYTYSVLINGLCKESKMDEANELFXEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTF LI G C+N K DLA+ ++++M + +P+++++NTLI G +
Sbjct: 233 LDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ N+ EM G + +T L+DG C +G + A E + D Y L
Sbjct: 293 KQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTAL 352
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC EG + A +++ E+ G P T +I + S L+++M ++G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 412
Query: 397 LPDSVT 402
+P VT
Sbjct: 413 VPSVVT 418
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 2/259 (0%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R RE + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKL 340
E++E G S IL+ C EG + + + V D R+ G+ P + L+
Sbjct: 123 FYKEILECGYPASLYFFNILMHRFCKEGEI-RLSQSVFDAIRKWGLRPSVVSFNTLMNGY 181
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+G+ + + G P V + LI GL + K EA+ L +ML +G++P+
Sbjct: 182 IRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNG 241
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VTF L++ C G+ A + ++ L PD +TY+ L+ G ++ K+ NL+NE
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301
Query: 461 MLDEGFIPDLATYNSYMDG 479
M +G PD TY + +DG
Sbjct: 302 MSMKGLKPDKITYTTLIDG 320
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 43/349 (12%)
Query: 174 LLAFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFYDRMVRD---RVKPDVVT 227
LL L+D PSV YN ++ + D+A M + +P+ V+
Sbjct: 58 LLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ +L+ C ++ D A+GL R MR G +VV++ TLIRG + D+ V + EM
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
E G E + V L+ G C GR ++ ++ S +G+ P Y GL++ LC G A
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL- 406
A V+D + ++G P+V+ LI + + EA G+++KM ++G+ PD VT+N L
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
Query: 407 ------------------------------------LEDLCDVGRTVDADRLRLLASTKG 430
++ LCD+GR A ++R + G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +TY++L+ G R ++ ++ L++EM G PD TY+ + G
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 7/308 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNILISGFCRNKKFDLAL 245
P V YN LI G E D+A+ + MVR + VKP+VVTFN +I G C + A
Sbjct: 288 PDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAF 347
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ M E GC N+V++N LI G K + + + EM LG E S T IL+ G
Sbjct: 348 QVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGF 407
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP-S 364
C +V +A +L+ RG+ P+ F Y L+ +C +G A + +E+ N P
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLD 465
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+A +T+I G + A L++ ++ EG+ PD+VT++ ++ G A+ +
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL--SN 482
+ G PD + L+ GY+ + + L+ EM+ + D ++ L SN
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASN 585
Query: 483 ARKSVRQT 490
K++ Q+
Sbjct: 586 EGKALLQS 593
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ ++ T L+ L R +A GL+ M G+ D VT+ L+ LCD A L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G++P+ + Y L+ GY + R ++ + EM ++G PD+ Y +D L
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 483 ARKS 486
K+
Sbjct: 233 VGKA 236
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +F+ + ++M + D+ T++I I+ FCR + LAL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G + + T L+ GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL +++++ +V+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R A L +M +GI P+ VT+N L+ LC+ GR DA RL
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L EM+ PD TYN ++G
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL P + + L+NG+ + A+ D+M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD TF LI G + K A+ L +M ++GC P++V++ T++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M + + V ++D LC V A +L + +G+ P Y L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ + +K P+V+ LI+ + K VEA L E+M++ I
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD++T+N L+ C R +A ++ +K P+ TY+ L++G+ + R ++G
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM G + + TY + + G A
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 5/298 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N LI+ F K + +A ++ M++ + PD +T+N+LI+GFC + + D A +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+ M K C PN+ ++NTLI GF ++ ++GV + EM + G ++VT ++ G
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 308 EGRVLKACELVIDFSRRGVLPKDF-DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G A ++V +P D Y L+ LC G AL + L K ++
Sbjct: 446 AGDCDSA-QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+IEG+ + K EA L + I PD VT+N ++ LC +AD L
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ R L+ EM GF+ D +T + + L + R
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 157 FHFAVNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++AF K ++ + L E +++ ID P YN+LINGF D+A +
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSID--PDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV P++ T+N LI+GFC+ K+ + + LFREM ++G N V++ T+I+GFF
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ +T IL+ GLC+ G++ A + + + F Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E +C G G A ++ L K P V+ T+I GL R EA L KM ++G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 396 ILPDSVTFNCLLE-DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
LP+S T+N L+ +L D R A+ ++ + S+ G D T ++ +
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS-GFVGDASTISLVTN 613
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 133/262 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN +I K + D+A M KPD+ T+N +I C N + A +FR +
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G N +++NTLI ++ EG+ +A EM+ GC+ ++ L+ LC EG V
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
++ L+ + +G+ P +F Y L+ +LC G ALE+ E+ +G P ++ TLI
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL ++ A L+EK+ E + PD VT+N L+ C V DA L A + G+
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660
Query: 433 PDGMTYHILVSGYTRENRRKEG 454
P+ T+ ++V + R+ EG
Sbjct: 661 PNERTWGMMVQNFVRQTVNLEG 682
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 148/292 (50%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V + N +I G + + +A Y+ M PDV T++IL+ G C+ +F A+ +
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM EKGC PN+V+++TL+ F +D+ M +M+ G +S ++ LC +
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G++ +A LV + +G P Y ++ LC A + L ++G + + I
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TLI L R + E L +ML G D +++N L++ LC G + L T
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG+ P+ +Y++L++ + + ++ L EML++G PD+ TYN+ ++GL
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 8/306 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS YNV+++ + AL Y RM+RDRV P TF + CR + AL L
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M GC P+ V + T+I + E + EM+ +GC T LV GLC
Sbjct: 200 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG 259
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP--SV 365
GRV +A LV +G +P Y L++ LC A A ++ G LP +V
Sbjct: 260 LGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML------GRLPEVNV 313
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ T+I G K A+ L E M +G PD T++ L+ LC +GR A R+
Sbjct: 314 VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDE 373
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG P+ +TY L+ + R + ++++ML +GF + YN + L K
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGK 433
Query: 486 SVRQTR 491
+ TR
Sbjct: 434 LDQATR 439
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 137/287 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y++L++G K F A+ D M P++VT++ L+ FCRN +D A +
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 405
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M KG + N +N +I + K D+ + EM GC+ T ++ LCN
Sbjct: 406 LDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCN 465
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A + + GV+ Y L+ L G L + E+ G VI+
Sbjct: 466 NDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVIS 525
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ L + + L+E+M+ +GI P++ ++N L+ +LC G+ DA L
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+GL PD +TY+ L++G + NL+ ++ +E PD+ TYN
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYN 632
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 7/345 (2%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G CP + ++ K R + + M + P++ Y+ L++ F +
Sbjct: 340 GSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE-KGCAPNIVTYSTLLHSFCRNGM 398
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+D A D+M+ + +N +I C++ K D A L +EM+ +GC P++ ++NT
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I +E ++ +IE G + +T L+ L GR + L + G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
Y GL++ LC EGN ++ +++E+ KG P+ + LI L + K +A
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL 578
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ML +G+ PD VT+N L+ LC VG T A L + + PD +TY+IL+S +
Sbjct: 579 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWH 638
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ + L+++ + G +P+ T+ + VRQT
Sbjct: 639 CKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF------VRQT 677
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 149/324 (45%), Gaps = 5/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F A A + R D L M + P +Y +I+ V +A D M
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMAR-HGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEM 238
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ DV TFN L+ G C + A L M +GC P+VV++ L++G R+
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE M + E+ + V ++ G EG++ +A EL +G P Y L
Sbjct: 299 DEACAMLGRLPEV----NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSIL 354
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G G A+ ++DE+ +KG P+++ +TL+ R +A ++++ML +G
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+S +N ++ LC G+ A RL ++G PD TY+ ++ + +E E+
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEH 474
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +++EG + + TYN+ + L
Sbjct: 475 IFRNLIEEGVVANGITYNTLIHAL 498
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 197/405 (48%), Gaps = 16/405 (3%)
Query: 82 LHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCP 141
+ H P + IF + S++ +TF ++ + A+ F L VL+ +
Sbjct: 36 IEHDPPISD---KIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMR----- 87
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV 201
C + +E+ F A+ KA+ + F+ M + + +V +N ++N +
Sbjct: 88 CEKRVV-----VEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVII 142
Query: 202 KCREFDKALGFYDRMVRDR---VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ F +AL FY+ ++ + + P+V+TFN++I C+ D A+ +FR+M C P
Sbjct: 143 QEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQP 202
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+V ++ TL+ G + DE V++ EM GC S VT +L++GLC +G + + +LV
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLV 262
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G P + Y L+ LC +G A+ ++D + +P+V+ T+I GL +
Sbjct: 263 DNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 322
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ ++ + ++ M + G + ++ L+ L G++ +A +L + K + + + Y
Sbjct: 323 GRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVY 382
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ G R+ + E +++EM + P+ TY+S M G A
Sbjct: 383 SAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEA 427
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 156/327 (47%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + K ++D + F M + +P V Y L++G K D+A+ D M
Sbjct: 172 FNLVIKTMCKVGLVDDAVQMFRDM-PVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D P VTFN+LI+G C+ L M KGC PN V++NTLI G + K
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ +++ M+ C + VT +++GL +GR L ++ RG ++ Y L
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L EG + A+++ E+ K + I + +I+GL R K EA ++ +M
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P++ T++ L++ + G A + + + + Y +L+ G ++ + KE
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 470
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +ML +G PD+ Y S ++GLSNA
Sbjct: 471 VWAQMLGKGCKPDVVAYGSMINGLSNA 497
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 174/373 (46%), Gaps = 25/373 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L + R E S+L+ + DG F P F+ +N K
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQI-------DGCFPSP---VTFNVLINGLCKK 252
Query: 168 NRMNDGLLAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
G LA A KL+D P+ YN LI+G + +KA+ DRMV +
Sbjct: 253 -----GDLARVA--KLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKC 305
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
P+VVT+ +I+G + + + M E+G + N ++ LI G F E K E +
Sbjct: 306 VPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQ 365
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ EM CE +++ ++DGLC +G+ +A E++ + + P + Y L++
Sbjct: 366 LFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFF 425
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
GN A+E+ ++ K + + + LI GL + K EA + +ML +G PD V
Sbjct: 426 EAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVV 485
Query: 402 TFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ ++ L + G DA +L +L PD +TY+IL++ +++ +L+N
Sbjct: 486 AYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLN 545
Query: 460 EMLDEGFIPDLAT 472
MLD G PDL T
Sbjct: 546 SMLDRGCDPDLVT 558
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N VK R DG M + + +Y+ LI+G K + +A+ + M
Sbjct: 316 INGLVKQGRALDGARVLALMEER-GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKE 374
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ + + ++ +I G CR+ K D AL + EM C PN ++++L++GFF + +
Sbjct: 375 CELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAI 434
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY------- 333
M +M + + V +L+ GLC +G+V +A + +G P Y
Sbjct: 435 EMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGL 494
Query: 334 --FGLVE----------------------------KLCGEGNAGIALEVVDELWKKGNLP 363
GLVE LC + + A+++++ + +G P
Sbjct: 495 SNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDP 554
Query: 364 SVIACTTLIEGLR---------------------RLRKGVEASGLMEKMLKEGILPDSVT 402
++ C + LR + ++ + AS ++E ML++ + P T
Sbjct: 555 DLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPST 614
Query: 403 FNCLLEDLCD 412
+ ++EDLC+
Sbjct: 615 WTRVVEDLCN 624
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E + ++ K ++ + ++ + M L G +P V Y +ING + AL
Sbjct: 449 EVCYSVLIHGLCKDGKVKEAMMVWAQM--LGKGCKPDVVAYGSMINGLSNAGLVEDALQL 506
Query: 213 YDRMVRDR--VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y+ M+ +PDVVT+NIL++ C+ A+ L M ++GC+P++V+ +R
Sbjct: 507 YNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K D + G EF + LV L RVL A ++V ++ + PK
Sbjct: 567 --REKLDPPQD--------GREF----LDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKP 612
Query: 331 FDYFGLVEKLCGEGNAGIALE 351
+ +VE LC A++
Sbjct: 613 STWTRVVEDLCNPKKVQAAIQ 633
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 165/348 (47%), Gaps = 13/348 (3%)
Query: 150 CPEME--------RIFHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLING 199
C +ME + +N F + ++ AF AM K+ + P+ +N L+NG
Sbjct: 113 CKQMELKGIAYDLYTLNIMINCFCRRRKLG---FAFSAMGKIFKLGYEPNTVTFNTLLNG 169
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
+A+ D MV + PD++T N +++G C + A+ L M GC PN
Sbjct: 170 LCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPN 229
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
++ ++ +++ +M + VT I++D LC +GR+ A
Sbjct: 230 QFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFS 289
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ +G+ F Y L+ C G +++ ++ + P+V+ + LI+ L +
Sbjct: 290 EMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEG 349
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
K EA L +M+ GI P+++T+N L+ LC+ R +A+++ L +KG DPD TY+
Sbjct: 350 KLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYN 409
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
IL++G+ + + +G L +M G I D TY++ + G +RK +
Sbjct: 410 ILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 155/320 (48%), Gaps = 3/320 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K R++D L F M K I + +V YN LI F +D
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGI--KANVFTYNSLIGSFCSFGRWDDGAQLLRD 325
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++ P+VVTF+ LI + K A L+ EM +G PN +++N+LI G +++
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE M M+ GC+ T IL++G C +V L S RG++ Y
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C +A +V E+ +G P ++ L++GL + EA G++++M K
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +N ++ +C+ + DA L +KG+ D +Y+I++SG + + E +
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 456 NLVNEMLDEGFIPDLATYNS 475
L +M ++G+ PD TYN+
Sbjct: 566 ALFRKMKEDGYEPDGCTYNT 585
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 175/375 (46%), Gaps = 15/375 (4%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ I+ +L R L L+F S +F+ ++ + +F R
Sbjct: 267 TYTIIIDNLCKDGR---LDDALSFFSEMETKGIKANVFT-------YNSLIGSFCSFGRW 316
Query: 171 NDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+DG + +R +I + P+V ++ LI+ VK + +A Y+ M+ ++P+ +T+
Sbjct: 317 DDGA---QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N LI G C +K+ D A + M KGC+P++ ++N LI GF ++ D+G+ + +M
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G +VT L+ G C +++ A ++ + +GV P Y L++ LC G
Sbjct: 434 RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEE 493
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
AL ++D++ K + +I G+ K +A L + +G+ D ++N +L
Sbjct: 494 ALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLS 553
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC +AD L G +PDG TY+ L+ + R N L+ EM GF
Sbjct: 554 GLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSS 613
Query: 469 DLATYNSYMDGLSNA 483
D +T MD LS+
Sbjct: 614 DASTVKIVMDMLSSG 628
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 1/306 (0%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R + +G +P+ Y ++N K AL +M ++KP VVT+ I+I C++
Sbjct: 220 RMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDG 279
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ D AL F EM KG NV ++N+LI F ++D+G + +MI + VT
Sbjct: 280 RLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFS 339
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+D L EG++ +A +L + RG+ P Y L+ LC + A +++D + K
Sbjct: 340 ALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK 399
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P + LI G + ++ + L KM G++ D+VT++ L++ C + + A
Sbjct: 400 GCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVA 459
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ ++G+ P MTY IL+ G +E ++++M D+ YN + G
Sbjct: 460 KKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHG 519
Query: 480 LSNARK 485
+ NA K
Sbjct: 520 MCNANK 525
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 36/338 (10%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L R S L +G V ++ D A+ + M+R R P V+ FN L R K++D
Sbjct: 49 LTSDRKMSSYKERLRSGLVDIKK-DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYD 107
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
L L L ++M KG ++ + N +I F RK + ++ +LG E ++VT L+
Sbjct: 108 LVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLL 167
Query: 303 DGLCNEGRVLKACELV-------------------------------IDFSRR----GVL 327
+GLC EGRV +A ELV +D R G
Sbjct: 168 NGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQ 227
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P F Y ++ ++C GN AL+++ ++ + P V+ T +I+ L + + +A
Sbjct: 228 PNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSF 287
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+M +GI + T+N L+ C GR D +L T+ + P+ +T+ L+ +
Sbjct: 288 FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK 347
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + E ++L NEM+ G P+ TYNS + GL N ++
Sbjct: 348 EGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 2/296 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE +++ D + +VSIYN LI+GF + +KA M R+ +PDVVT+NIL++
Sbjct: 354 AFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLN 413
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+C D A L R+M G NP+ S+N L++G + D+ + +E+G
Sbjct: 414 HYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFC 473
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V+C IL+D C +V A L + +G+ Y L+ L G G + +A E+
Sbjct: 474 DIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELF 533
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D++ +P+V ++ L ++ A + +M ++ + PD+VTFN L+ L
Sbjct: 534 DQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKS 593
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
R V+A L TKG++PD +T+ ++SG E + + M++ G I D
Sbjct: 594 SRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILD 649
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 159 FAVNAFVKA----NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+A N +V NR+ D L E M G P V Y +++ R F +A+G ++
Sbjct: 266 WACNIYVHYLCGHNRLYDALQMVEKMTMKGTG-PDVVTYTTVVSCLCDHRRFSEAVGLWE 324
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MVR +KPDVV LI G C+N+K D A L M NV +N LI GF+
Sbjct: 325 EMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAG 384
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ M GCE VT IL++ C+ G KA L+ GV P + Y
Sbjct: 385 SIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYN 444
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR--------------K 380
L++ LC A V + + G +++C LI+ R + K
Sbjct: 445 ILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYK 504
Query: 381 GVEASG---------------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G++A L ++ML I+P+ +N +L +LC VG A
Sbjct: 505 GIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHA 564
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ + K + PD +T++ L+ + +R E +L EM +G PD T+ + G
Sbjct: 565 QKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISG 624
Query: 480 LSNARKS 486
L + K+
Sbjct: 625 LLDEGKA 631
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 137/330 (41%), Gaps = 35/330 (10%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S+Y VL+ G+ + +FD + +D MV + V +N I +N FDL +
Sbjct: 161 SLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNM 220
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
KG +++ I + + + +M + GC C I V LC R
Sbjct: 221 ALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNR 280
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A ++V + +G P Y +V LC A+ + +E+ ++G P V+AC
Sbjct: 281 LYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGA 340
Query: 371 LIEGLRRLRKGVEASGLMEKML-----------------------------------KEG 395
LI GL + +K EA L +ML + G
Sbjct: 341 LIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNG 400
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N LL C +G T A+ L G++PD +Y+IL+ G + ++ +
Sbjct: 401 CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAF 460
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
V++ ++ G D+ + N +D A+K
Sbjct: 461 AFVSDHMEVGGFCDIVSCNILIDAFCRAKK 490
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA+++ D AF + + G + N+LI+ F + ++ + AL + M
Sbjct: 443 YNILLKGLCKAHQL-DKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEM 501
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ D VT+ ILI+G +LA LF +M PNV +N ++ F
Sbjct: 502 GYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHF 561
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ ++M + +VT L+ L R ++A +L + +GV P + + +
Sbjct: 562 KHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYI 621
Query: 337 VEKLCGEGNAGIALEVVDELWKKG 360
+ L EG A +A E+ + + + G
Sbjct: 622 ISGLLDEGKATLAYEIWEYMMENG 645
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 153/323 (47%), Gaps = 36/323 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F K + F+A+ K RPSV YN L+NG+++ + ++ M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKW-GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAM 201
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V+PDV T+++LI+G C+ K D A LF EM KG PN V+F TLI
Sbjct: 202 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLI--------- 252
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DG C GRV A E+ + +LP Y L
Sbjct: 253 --------------------------DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTL 286
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G+ A +++DE+ KG I TTLI+G + A ++M++E I
Sbjct: 287 IYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENI 346
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D V + L+ LC GR+VDA+++ + GL PD TY ++++ + ++ +G
Sbjct: 347 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSK 406
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L+ +M G P + TYN M+G
Sbjct: 407 LLKDMQRNGHAPSVVTYNVLMNG 429
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ IA V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 146 LMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASG 205
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 206 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAM 265
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 266 EIYKQMLSQSLLPDLITYNTLIYGL 290
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G + G FN L+ C G A +
Sbjct: 107 TCKKVLEHLMKLKYFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAI 166
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 167 AKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 225
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 2/296 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE +++ D + +VSIYN LI+GF + +KA M R+ +PDVVT+NIL++
Sbjct: 354 AFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLN 413
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+C D A L R+M G NP+ S+N L++G + D+ + +E+G
Sbjct: 414 HYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFC 473
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V+C IL+D C +V A L + +G+ Y L+ L G G + +A E+
Sbjct: 474 DIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELF 533
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D++ +P+V ++ L ++ A + +M ++ + PD+VTFN L+ L
Sbjct: 534 DQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKS 593
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
R V+A L TKG++PD +T+ ++SG E + + M++ G I D
Sbjct: 594 SRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILD 649
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 159 FAVNAFVKA----NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+A N +V NR+ D L E M G P V Y +++ R F +A+G ++
Sbjct: 266 WACNIYVHYLCGHNRLYDALQMVEKMTMKGTG-PDVVTYTTVVSCLCDHRRFSEAVGLWE 324
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MVR +KPDVV LI G C+N+K D A L M NV +N LI GF+
Sbjct: 325 EMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAG 384
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++ M GCE VT IL++ C+ G KA L+ GV P + Y
Sbjct: 385 SIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYN 444
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR--------------K 380
L++ LC A V + + G +++C LI+ R + K
Sbjct: 445 ILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYK 504
Query: 381 GVEASG---------------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G++A L ++ML I+P+ +N +L +LC VG A
Sbjct: 505 GIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHA 564
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ + K + PD +T++ L+ + +R E +L EM +G PD T+ + G
Sbjct: 565 QKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISG 624
Query: 480 LSNARKS 486
L + K+
Sbjct: 625 LLDEGKA 631
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 137/330 (41%), Gaps = 35/330 (10%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S+Y VL+ G+ + +FD + +D MV + V +N I +N FDL +
Sbjct: 161 SLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNM 220
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
KG +++ I + + + +M + GC C I V LC R
Sbjct: 221 ALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNR 280
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A ++V + +G P Y +V LC A+ + +E+ ++G P V+AC
Sbjct: 281 LYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGA 340
Query: 371 LIEGLRRLRKGVEASGLMEKML-----------------------------------KEG 395
LI GL + +K EA L +ML + G
Sbjct: 341 LIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNG 400
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT+N LL C +G T A+ L G++PD +Y+IL+ G + ++ +
Sbjct: 401 CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAF 460
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
V++ ++ G D+ + N +D A+K
Sbjct: 461 AFVSDHMEVGGFCDIVSCNILIDAFCRAKK 490
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA+++ D AF + + G + N+LI+ F + ++ + AL + M
Sbjct: 443 YNILLKGLCKAHQL-DKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEM 501
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ D VT+ ILI+G +LA LF +M PNV +N ++ F
Sbjct: 502 GYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHF 561
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ ++M + +VT L+ L R ++A +L + +GV P + + +
Sbjct: 562 KHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYI 621
Query: 337 VEKLCGEGNAGIALEVVDELWKKG 360
+ L EG A +A E+ + + + G
Sbjct: 622 ISGLLDEGKATLAYEIWEYMMENG 645
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 43/372 (11%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI------YNVLINGFVKCREFDK 208
R+ +N +K + DG EAM L+ P + Y++L+ GF ++
Sbjct: 130 RVNDIVINQLLKG--LCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEE 187
Query: 209 ALGFYDRMVRDRVK---PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
AL M D + P+VVT+ +I G C+ + FD A G+F++M + G PN ++N
Sbjct: 188 ALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNC 247
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC------------------- 306
LI G+ K+ E V M +M G + T L++ LC
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSP 307
Query: 307 -------------NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
G + KA ++ + G+ P +Y L++ LC G A
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+++ +G P+++ +L+ GL + K A L+ +ML +GI P++V FN L+ +LC+V
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR ++ RL L G+ PD +Y L+SGY R E E + + M+ G P TY
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTY 487
Query: 474 NSYMDGLSNARK 485
N+ + G +A +
Sbjct: 488 NTLLHGYCSASR 499
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 140/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P I+N+ + + KC DKA+ +++M + + P+VV + LI C+ + D A
Sbjct: 307 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 366
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M +G PN+V FN+L+ G K++ + YEM++ G ++V L+ LCN
Sbjct: 367 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 426
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV++ L+ GV P F Y L+ C G A +V D + G P+ +
Sbjct: 427 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVT 486
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G + +A L +ML++G+ P VT+N +L L R +A L L
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 546
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G D TY+I+++G + N E + + +G ++ T+ + L
Sbjct: 547 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 599
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 13/350 (3%)
Query: 125 FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
SE+HS L+ + N P+ IF+ +A+ K ++ + F MR+
Sbjct: 290 LSEMHSFLDLMVENGLS---------PD-HHIFNIFFSAYAKCGMIDKAMDIFNKMRQ-- 337
Query: 185 DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
G P+V Y LI+ K D A +++M+ + V P++V FN L+ G C K++
Sbjct: 338 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 397
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A L EM ++G PN V FNTLI + EG + M +G + + L+
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 457
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C GR +A ++ G+ P + Y L+ C A + E+ +KG P
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 517
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ T++ GL + ++ EA L M+ G D T+N +L LC +A ++
Sbjct: 518 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMF 577
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+KGL + +T+ I++ + R+++ +L + G +P++ TY
Sbjct: 578 QSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTY 627
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D ++ +++ + R E +L ++ ND SCP + ++ KA
Sbjct: 168 DTVSYSILLKGFCNENRAEEALELLRMMA-------NDHGRSCPPNVVTYTTVIDGLCKA 220
Query: 168 NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFV---KCREFDKAL------------ 210
+ F+ M ID +P+ YN LI+G++ K +E + L
Sbjct: 221 QLFDRAEGVFQQM---IDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDC 277
Query: 211 -----------------GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
F D MV + + PD FNI S + + D A+ +F +MR+
Sbjct: 278 YTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 337
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G +PNVV++ LI + D+ +MI G + V LV GLC + +
Sbjct: 338 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 397
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A ELV + +G+ P + L+ LC G ++D + G P + T LI
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 457
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + EA + + M+ G+ P VT+N LL C R DA L KG+ P
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 517
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY+ ++ G + R E + L M++ G D+ TYN ++GL +
Sbjct: 518 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 567
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 154/350 (44%), Gaps = 26/350 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDK 208
C E+ERI A A + ++D L F+ + LI RP SV +N ++N +
Sbjct: 12 CLELERII--AARARSGSLGLDDALKLFDEL--LIHARPASVVAFNQILNAVSRASRASG 67
Query: 209 -----------ALGFYDRMVRD---RVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+ ++RMVR+ +V P+ T++ILI CR + + F + +
Sbjct: 68 RRSSSTSESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKT 127
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLK 313
G N + N L++G ++ E +++ + M ELGC +V+ IL+ G CNE R +
Sbjct: 128 GWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEE 187
Query: 314 ACELVIDFSR---RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A EL+ + R P Y +++ LC A V ++ G P+
Sbjct: 188 ALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNC 247
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI G + K E ++EKM G+ PD T+ LL LC + + L G
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALS---EMHSFLDLMVENG 304
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L PD ++I S Y + + ++ N+M G P++ Y + +D L
Sbjct: 305 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 354
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 7/304 (2%)
Query: 192 IYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
+ N L+ G + +A+ RM PD V+++IL+ GFC + + AL L R
Sbjct: 135 VINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRM 194
Query: 251 MRE---KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + C PNVV++ T+I G + FD + +MI+ G + ++ T L+ G +
Sbjct: 195 MANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLS 254
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ + +++ S RG+ P + Y L+ LC L+++ E G P
Sbjct: 255 IGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE---NGLSPDHHI 311
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ +A + KM + G+ P+ V + L++ LC +GR DA+
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+G+ P+ + ++ LV G ++ + E LV EMLD+G P+ +N+ + L N + +
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 431
Query: 488 RQTR 491
R
Sbjct: 432 EGRR 435
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 6/283 (2%)
Query: 181 RKLID------GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
R+LID RP Y LI+G+ D+A +D MV + P VT+N L+ G
Sbjct: 434 RRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 493
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+C + D A LFREM KG P VV++NT++ G F ++F E + MI G +
Sbjct: 494 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
T I+++GLC V +A ++ +G+ + ++ L G A+++
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ G +P+V+ + E L E L M K G P+S N L+ L G
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
A + + T +L+S +T + + ++L
Sbjct: 674 DISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 146/327 (44%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + KA + L F +++ G P+V YN+LI+G+ + + + A + M
Sbjct: 373 YNSLINGYCKAGNLKQALCLFGDLKRAGLG-PTVLTYNILIDGYCRLGDLEGARRLKEEM 431
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PDV T+ IL++G C + + F EM KG P+ ++NT I
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAI 491
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM+ G +VT +L+DGLC G + A L + G+ Y L
Sbjct: 492 TNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCL 551
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A + D + G PSV+ T I R A G KML+EG+
Sbjct: 552 IHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV 611
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT+N L+ LC +GRT A + +GL P+ TY +L+ G +E
Sbjct: 612 EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIR 671
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM +G PD T+N+ G
Sbjct: 672 LYCEMHQKGIHPDHCTHNALFKGFGEG 698
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 153/356 (42%), Gaps = 35/356 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++F KA RM+ + + M G P+ YNV+ING + E +KA D
Sbjct: 232 YNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDI 291
Query: 216 M-------------------VRDRVK---------------PDVVTFNILISGFCRNKKF 241
M RD V+ P VVT+N LI G +
Sbjct: 292 MRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ A F EMR KG P+++++N+LI G+ + + + ++ G + +T IL
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DG C G + A L + + LP Y L+ C N + DE+ KG
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P A T I + A L E+M+ GI D+VT+N L++ LC G DA
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
L + T GL D +TY L+ + R E +N+ + M+ G P + TY ++
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFI 587
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN LI+G K + A +D M + PD++T+N LI+G+C+ AL L
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCL 392
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +++ G P V+++N LI G+ + + EM E C T IL++G C
Sbjct: 393 FGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCM 452
Query: 308 EGRVLKACELVID-FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R L + D +G+ P F Y + G A ++ +E+ +G +
Sbjct: 453 V-RNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTV 511
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+GL + +A L KM+ +G+ D VT+ CL+ C+ GR ++A +
Sbjct: 512 TYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGM 571
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P +TY I + Y R +ML+EG P+ TYN M L
Sbjct: 572 VASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 3/290 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V N ++ +D Y M++ V+P + T+N L+ FC+ + D A+ L
Sbjct: 192 PFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVAL 251
Query: 248 FREM--REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
++M R GC PN V++N +I G + + ++ + +++ L + S+ T L+ GL
Sbjct: 252 LKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLSKKASAFTYNPLITGL 310
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
V KA L+++ G++P Y L++ L GNA A DE+ KG LP +
Sbjct: 311 LARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDL 370
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +LI G + +A L + + G+ P +T+N L++ C +G A RL+
Sbjct: 371 ITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE 430
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ + PD TY IL++G +EML +G PD YN+
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ L + M R V P V N ++ ++D ++ +M + G P++ ++NTL+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236
Query: 268 RGFFGERKFDEGVNMAYEM--IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
F + D+ V + +M GC + VT ++++GL +G + KA +LV D R
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLS 295
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
F Y L+ L A ++ E+ +G +P+V+ TLI+GL + A
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++M +G+LPD +T+N L+ C G A L GL P +TY+IL+ GY
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R + L EM +E +PD+ TY M+G
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 40/242 (16%)
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L F+EM G P V N ++R ++D+ + +M++LG E S T L+D
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238
Query: 305 LCNEGRVLKACELVIDFSRR--GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
C GR+ +A L+ D R G LP D Y ++ L +G A ++VD + +
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD-IMRLSKK 297
Query: 363 PSVIACTTLIEGLRRLRKGVEASG-LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
S LI GL R VE +G L+ +M EGI+P VT
Sbjct: 298 ASAFTYNPLITGLLA-RDFVEKAGALLLEMENEGIVPTVVT------------------- 337
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
Y+ L+ G + + + +EM +G +PDL TYNS ++G
Sbjct: 338 ----------------YNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYC 381
Query: 482 NA 483
A
Sbjct: 382 KA 383
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 15/188 (7%)
Query: 92 DFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCP 151
D ++ D R D T+ ++ + R E ++ DG+ +
Sbjct: 528 DAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF------------DGMVASG 575
Query: 152 EMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKA 209
+ + + R N LA+ RK+++ P+ YNVL++ + + A
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNL-YLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESA 634
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M+ + P+ T+ +LI G C+ + A+ L+ EM +KG +P+ + N L +G
Sbjct: 635 YQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKG 694
Query: 270 FFGERKFD 277
F +D
Sbjct: 695 FGEGHMYD 702
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 193/399 (48%), Gaps = 17/399 (4%)
Query: 90 HYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS 149
+ IF F H+H T+ ++ LA + +F + ++L+ ++ +
Sbjct: 73 QHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYE----------T 122
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD-- 207
C E IF + F K++ L F A++ ++ +PS+ + +N V+ ++ D
Sbjct: 123 CKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLA 182
Query: 208 -KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNT 265
K L + + ++ V+P+ FNIL+ C++ + AL + EM++ + PNV++++T
Sbjct: 183 QKCLLYVNEHLK--VRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYST 240
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEF-SSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI G G + E + + EM+ ++T +L+ G C+ G+ +A +++
Sbjct: 241 LIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSN 300
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P F+Y L+ C EG A EV DE+ G P + TTLI + + EA
Sbjct: 301 GCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEA 360
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+++M + D+VTFN LL+ LC GR +A R+ + +G+ + +Y I+++
Sbjct: 361 MELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNF 420
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ ++ L+ ML GF+P AT N + L A
Sbjct: 421 LCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEA 459
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 35/304 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ R+ + + FE M P Y+VLI GF + D+A + M +
Sbjct: 242 IDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNG 301
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+V +++L++GFC+ + + A +F EM+ G P+ V + TLI F G + DE +
Sbjct: 302 CDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAM 361
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E+ C+ +VT +L+ GLC EGR +A ++ + + GV Y ++ L
Sbjct: 362 ELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFL 421
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +G L K GL ML G +P
Sbjct: 422 CQKG--------------------------------ELEKSCALLGL---MLSRGFVPHY 446
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T N LL LC+ G +A + G P+ ++ L+ RE + LV+E
Sbjct: 447 ATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDE 506
Query: 461 MLDE 464
++++
Sbjct: 507 LVEK 510
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 17/268 (6%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+F + D D T+ +++ + ++ F+ +N C
Sbjct: 257 LFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCD------------P 304
Query: 155 RIFHFAV--NAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALG 211
+F+++V N F K R+ + F+ M+ G +P Y LIN F D+A+
Sbjct: 305 NVFNYSVLMNGFCKEGRLEEAKEVFDEMKS--SGLKPDTVGYTTLINCFCGVGRIDEAME 362
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
M + K D VTFN+L+ G CR +FD AL + + +G N S+ ++
Sbjct: 363 LLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLC 422
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + ++ + M+ G T L+ LC G V A + ++ G P+
Sbjct: 423 QKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPK 482
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ L+E +C E E+VDEL +K
Sbjct: 483 SWAHLIEYICRERKLLFVFELVDELVEK 510
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 179/413 (43%), Gaps = 50/413 (12%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D F + L +FSE+ + ++ S ++ E + V+ A
Sbjct: 18 DSQAFTLLATKLFRRSKFSEVVRLFTLLA------SRGVVYG----ETTYKLVVDGLCGA 67
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
N A E +R+L P++ IYN +I G + A ++MV + + P+V
Sbjct: 68 GMANQ---ALELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ IL++G CR+ K LA +F+EM+ GC PN +++ TLI+ + DE + + E
Sbjct: 125 TYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQ 184
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV--------- 337
L +TC +V GLC R+ A + + + + GV P + Y LV
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL 244
Query: 338 ---------------------------EKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ LC G A + V+EL + G +P V+ +
Sbjct: 245 DRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSM 304
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI R + + L+E M + G+ PD VT++ L+ LC + DA RL L G
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY+ ++ G + + E + ML PD+ TY+ M+GLS A
Sbjct: 365 SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA 417
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 145/342 (42%), Gaps = 39/342 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N ++N+ F+ M++ +G +P+ Y LI + E D+AL
Sbjct: 126 YTILLNGLCRSNKTKLAREVFQEMKR--NGCKPNPITYGTLIQHLSRAGEIDEALRVMIE 183
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF----- 270
+ DV+T ++ G C+ + D AL EMR+ G PN V+++ L+ GF
Sbjct: 184 QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGE 243
Query: 271 -------FGERKFDEGVNM---AY---------------------EMIELGCEFSSVTCE 299
F E K +G ++ AY E+ + G VT
Sbjct: 244 LDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYS 303
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+L++ G+ + EL+ D R GV P Y L+ LC E A +++ +
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAA 363
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G+ P+V+ ++++GL + K E + E MLK PD VT++ ++ L G A
Sbjct: 364 GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+L L + PD Y ++++ R + +E + + M
Sbjct: 424 VKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM 465
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 3/234 (1%)
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L R + E G + +F L F KF E V + + G + T +++VDGLC
Sbjct: 6 LERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLC 65
Query: 307 NEGRVLKACELVIDFSRRGVL-PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G +A ELV + S GV P F Y G++ LC A +V++++ ++ +P+V
Sbjct: 66 GAGMANQALELVRELS--GVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNV 123
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
T L+ GL R K A + ++M + G P+ +T+ L++ L G +A R+ +
Sbjct: 124 FTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIE 183
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L D +T +V G + +R + + EM G P+ TY++ + G
Sbjct: 184 QRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG 237
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L +F + +L + A P P + ++ ++ K+
Sbjct: 333 DVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP---------PNVV-TYNSVMDGLCKS 382
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+M++ +E M K P V Y++++NG K D A+ ++ + R PD
Sbjct: 383 GKMDEVHRVYEMMLK-SRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAA 441
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
++++I+ CR K + A G++ M N+
Sbjct: 442 YSMVITSLCRAGKLEEACGMYHGMEVTVAGDNI 474
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A T L L R K E L + G++ T+ +++ LC G A L L+
Sbjct: 21 AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQA--LELVR 78
Query: 427 STKGL-DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ P Y+ +++G R +R + ++ +M++E +P++ TY ++GL + K
Sbjct: 79 ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNK 138
Query: 486 S 486
+
Sbjct: 139 T 139
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 37/329 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y +LI GF + D A+ + M + + + V L+ G C + AL
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FR M K C P+V+++ L+ KFDE M EMI GC +VT L+DGLC
Sbjct: 67 FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA--------GI----------- 348
G +A ++ D +RG+ D + ++++LC + N+ G+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 349 -----------------ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
A ++++ + +KG +P+V T LI GL + + EA L+EKM
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G P+ VT++ ++ LC G+ DA L L + P+ +T++IL+ G + R
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+E L + M + G PD+ TYNS +DGL
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGL 334
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 39/354 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A R+ + L F AM K D P V Y L++ K +FD+A G M+
Sbjct: 51 MKGLCDAGRVVEALEHFRAMAK--DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG 108
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKG---------------CN-------- 257
PD VTF+ LI G C+ + A + ++ ++G CN
Sbjct: 109 CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELA 168
Query: 258 -------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
P V+ FN +I GF + D + MIE GC + T IL+ G
Sbjct: 169 SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITG 228
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC RV +A +L+ G P Y ++ LC +G A E+ + ++ P+
Sbjct: 229 LCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 288
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ LI+GL + ++ EA L +M + G PD +T+N L++ LC + +A +L
Sbjct: 289 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348
Query: 425 LASTKGLD-PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
G+ + +TY L GY R + + + ++D+GF PDLATY S +
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 44/370 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F + KANR+ + A + + K++ G P+V Y+ +ING K + D A +
Sbjct: 222 FTILITGLCKANRVGE---AQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 278
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R P+VVT NILI G C+ K+ + A L+ MRE GC P+++++N+LI G
Sbjct: 279 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338
Query: 275 KFDEGVNMAYEMIELGCEFS-SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ DE + + E G + +VT L G GR+ AC + +G P Y
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398
Query: 334 FGLVEKLCG----------------------------------EGN-AGIALEVVDELWK 358
L+ + C EGN A+++ D +
Sbjct: 399 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 458
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE---GILPDSVTFNCLLEDLCDVGR 415
+G + ++EG+ R K +A ++E+++ + P S + L+E LC VGR
Sbjct: 459 RGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGR 518
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
T DA +L S +G +Y+ L+SG +R R E + M+ G P+++T N
Sbjct: 519 TDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 578
Query: 476 YMDGLSNARK 485
+ L +A K
Sbjct: 579 VISWLCSAAK 588
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 178/408 (43%), Gaps = 34/408 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-------DGIFSCPEMERIFHFA 160
D T+ +V +L + +F E +L + A C DG+ E+ F
Sbjct: 77 DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 136
Query: 161 VNAFVKA----------------NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVK 202
+ + N+ N LA + + +I P+V ++N++INGF K
Sbjct: 137 EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 196
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
++ D A + M+ P+V TF ILI+G C+ + A L +M GC+PNVV+
Sbjct: 197 AKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVT 256
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIEL----GCEFSSVTCEILVDGLCNEGRVLKACELV 318
++T+I G + + D+ AYE+ +L C + VT IL+DGLC R+ +A +L
Sbjct: 257 YSTVINGLCKQGQVDD----AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRR 377
G P Y L++ LC A ++ + + G + + + +TL G
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 372
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
L + +A + ++ +G PD T+ L+ + C R V+ L ++KG P T
Sbjct: 373 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 432
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ G N + L + M G D YN ++G++ A K
Sbjct: 433 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 141/321 (43%), Gaps = 3/321 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K+ ++++ F+ + + + Y+ L +G+ A + +
Sbjct: 327 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD+ T+ LI +C+ + + L EM KG P V + + ++ G F
Sbjct: 387 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 446
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLC---NEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + M GC ++ ++V+G+ + L E VID R P
Sbjct: 447 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAV 506
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LVE LC G A +++ ++ ++G +V + L+ GL RL++ EA+ + E M+
Sbjct: 507 DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVS 566
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P+ T N ++ LC + DA L S G PD T + L+ GY + R
Sbjct: 567 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 626
Query: 454 GENLVNEMLDEGFIPDLATYN 474
L+ EM + G P+ T++
Sbjct: 627 ARKLLEEMTEAGLEPNDTTHD 647
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PN ++ LIRGF D + + EM G E ++V L+ GLC+ GRV++A
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
E + + P Y LV LC G A ++ E+ +G P + +TLI+GL
Sbjct: 65 EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD-ADRLRLLASTKGLDPD 434
+ +A ++E +++ G+ F +++ LC+ +V+ A ++ + KG P
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++++++G+ + L+ M+++G +P++ T+ + GL A +
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR 234
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 139/339 (41%), Gaps = 17/339 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L S++ E + I + +N +S +FH +
Sbjct: 323 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS-----TLFH----GYAAL 373
Query: 168 NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
RM D F L+D P ++ Y LI + K + + + M P V
Sbjct: 374 GRMADACRIFSM---LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRV 430
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
T + ++ G + A+ LF M +GC + + +N ++ G K ++ + + +
Sbjct: 431 NTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQ 490
Query: 286 MIE-LGCEF--SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+I+ +F SS + LV+ LC GR A +L+ S RG Y GL+ L
Sbjct: 491 VIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSR 550
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A +V + + G P + +I L K +A L+++M K G PD T
Sbjct: 551 LQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIET 610
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
N L+ C GR A +L + GL+P+ T+ +L
Sbjct: 611 CNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
R +P F Y L+ G+ IA+++++E+ G + + TTL++GL + VE
Sbjct: 3 RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A M K+ PD +T+ L+ LC G+ +A + +G PD +T+ L+
Sbjct: 63 ALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID 121
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
G + ++ ++ +++ G A + + + L N SV
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSV 165
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 131/256 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN +I K + D+A+ M KPD+ T+N +I C N + D A +F +
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G N +++NTLI ++ EG+ +A EM+ GC V+ L+ LC EG V
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
++ L+ + +G+ P +F Y L+ +LC G ALE+ E+ +G P ++ TLI
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL ++ A L+EK+ E + PD VT+N L+ C V DA L A + G+
Sbjct: 604 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIV 663
Query: 433 PDGMTYHILVSGYTRE 448
P+ T+ ++V + R+
Sbjct: 664 PNERTWGMMVQNFVRQ 679
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 139/287 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+L++G K A+ D M P++VT++ L+ FCRN +D A +
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 408
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M KG + N +N +I + K DE + + EM GC+ T ++ LCN
Sbjct: 409 LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN 468
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ +A + + GV+ Y L+ L G L + +E+ G V++
Sbjct: 469 NDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVS 528
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ L + + L+E+M+ +GI P++ ++N L+ +LC G+ DA L
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+GL PD +TY+ L++G + NL+ ++ +E PD+ TYN
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYN 635
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V + N +I G + + +A Y+ M PDV T+NIL+ G C+ + A+ +
Sbjct: 315 NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRML 374
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM EKGC PN+V+++TL+ F +D+ M +M G +S ++ L +
Sbjct: 375 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKD 434
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G++ +A LV + +G P Y ++ LC A + L ++G + + I
Sbjct: 435 GKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITY 494
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS- 427
TLI L + E L +M+ G D V++N L++ LC G + DR +L
Sbjct: 495 NTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEG---NVDRSMMLLEE 551
Query: 428 --TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG+ P+ +Y++L++ + + ++ L EML++G PD+ TYN+ ++GL
Sbjct: 552 MMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 135/326 (41%), Gaps = 31/326 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS YN +++ + AL Y RM+RDRV P TF + CR + AL L
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M GC P+ V + T+I + E + EM+ +GC T +V GLC
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCG 262
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-------------------------- 341
G V +A LV G P Y L+ LC
Sbjct: 263 LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTV 322
Query: 342 -----GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
EG A E+ + + KG P V L+ GL +L + A ++++M ++G
Sbjct: 323 IRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGC 382
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT++ LL C G DA + S KG + Y+ ++ ++ + E
Sbjct: 383 APNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMR 442
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
LV EM +G PD+ TYN+ + L N
Sbjct: 443 LVQEMKSQGCKPDICTYNTIIYHLCN 468
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 201/513 (39%), Gaps = 66/513 (12%)
Query: 19 PPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLT------PTNNQITPS 72
PPPP P++ + P + P + L L +H LT ++P+
Sbjct: 4 PPPPRPALNSAAATSWPELLAPF-------DLSRLRATLSSHPLTPRRLARLLALPLSPA 56
Query: 73 SLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYR-------- 124
+ L L HP + + +++ + D L ++ SL S R
Sbjct: 57 TSLLLLDWYASSHPALSLSSLPLRPILASVGA-AGDPDRALALLDSLPRSSRLPPLRESL 115
Query: 125 -----------------------------FSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F ++VL+ ++ C D + M R
Sbjct: 116 LLPLLRSLPPGRALHLLDQMPRRFAVTPSFRSYNAVLSTLAR--ADCHADALLLYRRMLR 173
Query: 156 --------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F A A + R D L M + P +Y +I+ V
Sbjct: 174 DRVPPTTFTFGVAARALCRLGRARDALALLRGMAR-HGCVPDAVLYQTVIHALVAQGGVA 232
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A D M+ DV TFN ++ G C A L M GC P+VV++ L+
Sbjct: 233 EAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLL 292
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
RG R+ DE AY M+ E + V ++ G EG++ +A EL +G
Sbjct: 293 RGLCRTRQADE----AYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCP 348
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ LC G G A+ ++DE+ +KG P+++ +TL+ R +A +
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 408
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+++M +G +S +N ++ L G+ +A RL ++G PD TY+ ++
Sbjct: 409 LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN 468
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ E E++ +L+EG + + TYN+ + L
Sbjct: 469 NDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 142/300 (47%), Gaps = 11/300 (3%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++ S + + + ++L+ +SA ++ G ++ + A K +
Sbjct: 387 VTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG----------YNGIIYALGKDGK 436
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+++ + + M+ +P + YN +I + D+A + ++ + V + +T+N
Sbjct: 437 LDEAMRLVQEMKSQ-GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI + ++ L L EM GC +VVS+N LI+ E D + + EM+
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTK 555
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + ++ + +L++ LC G+V A EL + +G+ P Y L+ LC G A
Sbjct: 556 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 615
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L ++++L + P ++ LI ++R +AS L++K + GI+P+ T+ ++++
Sbjct: 616 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQN 675
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N KA ++ D L L+ E + + + P + YN LING K AL ++
Sbjct: 564 YNMLINELCKAGKVRDALELSKEMLNQGLT--PDIVTYNTLINGLCKVGWTHAALNLLEK 621
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ + V PD+VT+NILIS C+ + D A L + G PN ++ +++ F
Sbjct: 622 LPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFV 677
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 143/296 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LINGFV R+ A M + P+ TFN LI GFC+ ++ D AL +F M
Sbjct: 431 YNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIML 490
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G N+ + N + F E F E + + E+ +LG +S T I++ LC E +
Sbjct: 491 KVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTE 550
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA E++ + V P Y L++ + N AL + ++ K G PS++ T LI
Sbjct: 551 KAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLI 610
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
K EA L ++M+K+G++PD + F C++ C VG A L S G
Sbjct: 611 NMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKS 670
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
P+ +TY L+ GY + R + + L N+M + PD TY + + G + S R
Sbjct: 671 PNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDR 726
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 10/336 (2%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS--VSIYNVLIN-----GFVKCREFDKAL 210
+F +N F +AN+ FE ++ D PS V Y +++N F K + KA
Sbjct: 217 NFLLNCFAEANQTEFIRSLFEELK---DSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKAT 273
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ M + P VVT+ I G CR + AL L R++R + N +N +I F
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ E + +M G ++ + IL+DGLC +G+V KA +L+ + + V P
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSL 393
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L + LC G I+L + L +G VI+ TLI G R A L+ +
Sbjct: 394 VTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHE 453
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M G +P+S TFN L+ C R A + + G+ + T +I+ + RE
Sbjct: 454 MRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGH 513
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
E L+NE+ D G +P+ TYN + L +K+
Sbjct: 514 FWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKT 549
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 147/329 (44%), Gaps = 36/329 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F + +++ E MR P+ Y++LI+G K + +KAL + M
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSH-GISPTAYSYSILIDGLCKKGQVEKALDLIEEM 384
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ VKP +VT++ L G C++ +++L +F + +G +V+S+NTLI GF +R
Sbjct: 385 VQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQR-- 442
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D G AC+LV + G +P F + L
Sbjct: 443 DMG---------------------------------SACKLVHEMRMNGSVPNSFTFNRL 469
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C ALEV + K G ++ C + + R EA L+ ++ GI
Sbjct: 470 IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGI 529
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P+S T+N +++ LC +T A + + + P + Y+ L+ GY +++ +
Sbjct: 530 VPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALL 589
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +ML G P + TY ++ SN K
Sbjct: 590 LYAKMLKVGIPPSIVTYTMLINMFSNRSK 618
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 147/303 (48%), Gaps = 7/303 (2%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ + NVLI F + A + + R ++ ++++ N L++ F + + LF
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM-----AYEMIELGCEF-SSVTCEILV 302
E+++ G +PNV ++ T++ ++ + F + +++ E +E+ E + VT +
Sbjct: 237 EELKDSGPSPNVFTY-TIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
GLC G V A L+ D R + Y ++ + C G A E+++++ G
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ + + LI+GL + + +A L+E+M++ + P VT++ L + LC G T + +
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+G D ++Y+ L++G+ + LV+EM G +P+ T+N + G
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475
Query: 483 ARK 485
++
Sbjct: 476 RQR 478
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E IF + F K M +E M + P+V Y LI+G+ K + DKA +
Sbjct: 638 EIIFTCIIAGFCKVGDMKSAWALYEEMSQW-GKSPNVVTYTCLIDGYFKIKRMDKADFLF 696
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
++M RD V PD +T+ LI G+ D +F EM+E G PN ++ TL
Sbjct: 697 NKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 4/291 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P + YN L+N + K R + A Y M V P+++T +L++G C K A
Sbjct: 280 EPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQ 339
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M +G +P+VVS+NTL+ G+ E K ++ +EMI G SVTC ++V+G
Sbjct: 340 LFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFA 399
Query: 307 NEGRVLKACELVIDFSR-RGVLPKD-FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+G++L A V++ R R +P+D +DY L+ LC EG A + + + G +P
Sbjct: 400 RDGKLLSALNTVVELKRFRIKIPEDLYDY--LIVALCIEGRPFAARSFLLRISQDGYMPK 457
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ L+E L + EA L +M+K ++ + V + ++ LC V RT++A+ L
Sbjct: 458 INTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLE 517
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ G+ PD L++GY EN+ + +L+ +E + D +YN+
Sbjct: 518 EMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNA 568
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 197/472 (41%), Gaps = 68/472 (14%)
Query: 61 LLTPTNNQITPSSLLHFLKSKLHHHPQFTHY--DFHIFAWASTIDSFRHDHTTFLFIVRS 118
LL ++ + + +++K+ L+ P +Y HI AW+ F H +
Sbjct: 93 LLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRV---FSHA-------MNL 142
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFS--------CPEMERIFHFAVNAFVKANRM 170
L+ + E+ V C NDGI+ C IF + A+VKA +
Sbjct: 143 LSELIQLVEVEGV--------CVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMV 194
Query: 171 NDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
GL F R+ I+ P+V N L++G + + Y+ M R + + TF
Sbjct: 195 EKGLATF---RRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTF 251
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
NI+ C++ D +M E+G P++V++NTL+ + +R+ ++ + M
Sbjct: 252 NIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYI 311
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + +T +L++GLC EG+V +A +L RG+ P Y LV C EG +
Sbjct: 312 RGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQM 371
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEG----------------LRRLRKGV---------- 382
++ E+ G P + C ++EG L+R R +
Sbjct: 372 CRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIV 431
Query: 383 ---------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
A + ++ ++G +P T+N L+E LC +A L+ + +
Sbjct: 432 ALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMIL 491
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + Y ++S R NR E E L+ EM+ G +PD+ + ++G K
Sbjct: 492 NLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENK 543
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 156/343 (45%), Gaps = 39/343 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ VN++ K R+ D ++ M I G P++ + VL+NG + + +A + +
Sbjct: 286 YNTLVNSYCKKRRLEDAFYLYKIM--YIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQ 343
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + PDVV++N L+SG+CR K + L EM G P+ V+ ++ GF + K
Sbjct: 344 MVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGK 403
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+N E+ + + L+ LC EGR A ++ S+ G +PK Y
Sbjct: 404 LLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNK 463
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LVE LC N AL + E+ K+ + +++A +I L R+ + +EA GL+E+M+ G
Sbjct: 464 LVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSG 523
Query: 396 ILPD-----------------------------------SVTFNCLLEDLCDVGRTVDAD 420
ILPD + ++N +++ CDVG +
Sbjct: 524 ILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVAELL 583
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L+ G + +T ++ G + ++ E L ++ML+
Sbjct: 584 ELQDKLLKVGYVSNRLTCKYVIHGLQKA-MEQDDEMLGHDMLE 625
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 36/341 (10%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L +G +P++ IYN +IN K A ++ + PD T+ +I G CR
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL +F +M ++GC PN V+++TLI G + +E ++ EMI G ++ TC
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ LC+ G A L +D +G P + Y L+ LC G +A+ + + +
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRD 384
Query: 360 GNLPSVIACTTLIEGL---RRLR-------------------------KGV-------EA 384
G P+ + LI L RR++ KG +A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+M ML+ G + VT+N +++ CD G T A R+ L G PD +Y L+ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + ++ + L NEM+D+G P+ TY + +DG K
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 153/355 (43%), Gaps = 31/355 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + L + MR DG +P Y LI GF K + + A G ++
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMR---DGGCKPDEWSYTELICGFCKISKMESAFGLFN 519
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV D + P+ VT+ LI G+C+++K D A L M+ GC PNV ++N LI G +
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F + MIE G + VT ++DGLC G A E+ +G LP Y
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A + EL + G +P I +IE K A + +M+K
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 395 GILPDSVTFNCLLEDL--------------------CDVG-RTVDADRLRLL-ASTKGLD 432
G P T+ L++ L C G +T D D + ++ A LD
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759
Query: 433 PDGMTYHI---LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
P G++ + LVS + R E L+ M+ +G PD YNS + L R
Sbjct: 760 P-GLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFV 201
S DG+F P ++ +N V+ R+ + M + +G P++ YN +I G+
Sbjct: 382 SRDGVF--PN-TVTYNALINILVENRRIKYAFVVLNLMGR--NGCSPNIVTYNEMIKGYC 436
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ KA+ + M++ ++VT+N +I G+C + AL + MR+ GC P+
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
S+ LI GF K + + EM++ G + VT L+DG C + ++ A L+
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
R G P Y L+ L + N A E+ + ++G P+V+ T +I+GL +
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A + KM+++G LP+ +T++ L+ L G+ +A+ L GL PD +TY +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ Y + + N + M+ G P L TY + GL N
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + R+N+ AF+ +R++I P+ I ++ A + M
Sbjct: 292 INGLCDSGRVNE---AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+P+V T+ LISG C + +A+GLF M G PN V++N LI R+
Sbjct: 349 KGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M GC + VT ++ G C G KA ++ + +RG Y +++
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C GN AL ++D + G P + T LI G ++ K A GL +M+ +G+ P
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ L++ C + A L G P+ TY++L+ G T++N E L
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
M++EG P++ TY + +DGL
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGL 610
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A R +D + P+V Y LI+G A+G + RM RD V P+ VT+N LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELG 290
+ N++ A + M GC+PN+V++N +I+G+ G+ K + + + M++ G
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK--KAMLVMNNMLQRG 455
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT ++ G C+ G A ++ G P ++ Y L+ C A
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ +E+ G P+ + T LI+G + K A+ L+E M + G P+ T+N L+ L
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
A+ L + +G+ P+ +TY ++ G + + N+M+++G +P+L
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 471 ATYNSYMDGLSNARK 485
TY+S + L K
Sbjct: 636 LTYSSLIRALGQEGK 650
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RM+ + V+P+++ +N +I+ C++ A + +++ E +P+ ++ ++I G
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D + + +M + GCE ++VT L++GLC+ GRV +A +L+ + G+LP
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
G + LC G A + ++ KG P+V T LI GL A GL +M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G+ P++VT+N L+ L + R A + L G P+ +TY+ ++ GY K
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ ++N ML G +L TYN+ + G ++ + R
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 60/377 (15%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
+DG+ CP E + ++ + K +++ E M++ RP+V YNVLI+G K
Sbjct: 523 DDGL--CPN-EVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNVLIHGLTKQ 578
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
F A M+ + + P+VVT+ +I G C+N LAL +F +M E+GC PN++++
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638
Query: 264 NTLIRGFFGERKFDEGVNMAYE-----------------------------------MIE 288
++LIR E K +E N+ E MI+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698
Query: 289 LGCEFSSVTCEILVDGLCNE----GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
GC+ + T +L+ GL NE + L A V+ G D D ++ E
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ G++++V + L+ L + EA+ L+ M+ +G+ PD +N
Sbjct: 759 DPGLSVQVQN---------------ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803
Query: 405 CLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
LL L V R VD A + ST+G + Y L+ + +RRKE ML
Sbjct: 804 SLLCSLLRV-RNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 862
Query: 464 EGFIPDLATYNSYMDGL 480
+ PD +DGL
Sbjct: 863 RTWNPDDVVQAVLIDGL 879
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ +D L + G + A + L+ L RL +ML EG+ P+ + +N ++
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G DA+ + + PD TY ++ G+ R++ + N+M EG P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 470 LATYNSYMDGLSNARK 485
TY++ ++GL ++ +
Sbjct: 285 TVTYSTLINGLCDSGR 300
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%)
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D + A +D SV + N L++ + +A M+ + PD +N
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ R + DLA+G+F+ M +GC ++ + LI + E M+
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864
Query: 291 CEFSSVTCEILVDGLCNEG 309
V +L+DGL +G
Sbjct: 865 WNPDDVVQAVLIDGLLRDG 883
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 202/458 (44%), Gaps = 26/458 (5%)
Query: 43 TLTPTAHHTHLL---RFLKTHLLTPTNN---QITPSSLLHFLKSKLHHHPQFTHYDFHIF 96
T++ AH + + + + TH P N +I + ++ L + L + P F+
Sbjct: 25 TVSALAHFNYPIEEEQTINTHYQNPVTNHLFEINTAKVVITLNN-LRNEPSLAFSYFNQL 83
Query: 97 AWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL----------NFISANPCPCSNDG 146
+ + HD T+ IVR L +L S+L +F N DG
Sbjct: 84 KESG----YSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDG 139
Query: 147 IFSCPEMERIFHFAVNAFVK---ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
I + E + +A +K A+ M D K P + N L+N V+
Sbjct: 140 IAN--ESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVES 197
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
R+ D A+ Y ++ + P+ T+ I I GFCR A+ +FR+M E G PN S+
Sbjct: 198 RKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSY 257
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
T I G + D G + ++I +++ G C+E ++ +A ++ + +
Sbjct: 258 TTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEK 317
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G P + Y L+ C GN AL + DE+ KG + + +++++GL ++ E
Sbjct: 318 QGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASE 377
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
+ ++ K GI D +N +++ LC +G+ +A L + K + PD + Y ++S
Sbjct: 378 VANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVIS 437
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
GY + + + N+ EM D G PD+ TYN G S
Sbjct: 438 GYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFS 475
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 177/392 (45%), Gaps = 68/392 (17%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMR--KLIDGRPSVSIYNVLING-FVKCREFDKAL 210
E ++ ++A K ++ + + M+ K++ P + Y +I+G F+K + D AL
Sbjct: 394 EACYNVVMDALCKLGKVEEAVELLVEMKGKKMV---PDIINYTTVISGYFLKGKVVD-AL 449
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y M KPD+VT+N+L GF RN AL L M +G P+ V+ N +I G
Sbjct: 450 NIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGL 509
Query: 271 FGERKFDEGVNMAYEMIELGC--EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
K D+ ++ +E C +S+ +V+G C V KA L+I S++G +
Sbjct: 510 CIGGKVDDA-QAFFDNLEEKCLENYSA-----MVNGYCEANHVNKAFALLIRLSKQGRIL 563
Query: 329 KDFDYFGLVEKLCGEGNAGIAL-------------------EVVDELWKKGNL------- 362
K +F L+ LC EG++ AL +V+ L++ G +
Sbjct: 564 KKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVF 623
Query: 363 ---------PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE----- 408
P VI T +I G R+ K EA ++ M GI PD +T+ LL
Sbjct: 624 NMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKI 683
Query: 409 DLCDVGRTVDA--------DRLRLLASTKGLD--PDGMTYHILVSGYTRENRRKEGENLV 458
DL ++DA D L + K +D PD + Y +L+ + + N ++ NL
Sbjct: 684 DLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLF 743
Query: 459 NEMLDEGFIPDLATYNSYMDG---LSNARKSV 487
NEM+D G PD TY + + G + N +K+V
Sbjct: 744 NEMIDRGLAPDTVTYTALLSGYCNVGNIKKAV 775
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L F+ ++ +I+ + + + Y V+I GF + +A M + PDV + LI
Sbjct: 272 LGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALI 331
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SG+C AL L EM KG N V +++++G E N E ++G
Sbjct: 332 SGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIF 391
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
F +++D LC G+V +A EL+++ + ++P +Y ++ +G AL +
Sbjct: 392 FDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNI 451
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ G+ P ++ L G R EA L+ M +G+ PD+VT N ++E LC
Sbjct: 452 YREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCI 511
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+ DA K L+ Y +V+GY N + L+ + +G I A+
Sbjct: 512 GGKVDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKAS 567
Query: 473 Y 473
+
Sbjct: 568 F 568
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 138/333 (41%), Gaps = 39/333 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT-------------------- 227
P V +Y LI+G+ KAL +D MV VK + V
Sbjct: 322 PDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQ 381
Query: 228 ---------------FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+N+++ C+ K + A+ L EM+ K P+++++ T+I G+F
Sbjct: 382 FKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFL 441
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ K + +N+ EM ++G + VT +L G G +A L+ +GV P
Sbjct: 442 KGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVT 501
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ ++E LC G A D L +K + + ++ G +A L+ ++
Sbjct: 502 HNMIIEGLCIGGKVDDAQAFFDNLEEK----CLENYSAMVNGYCEANHVNKAFALLIRLS 557
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+G + +F LL +LC G + A L ++P + Y ++ + +
Sbjct: 558 KQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEME 617
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + + N ++D G PD+ TY ++G K
Sbjct: 618 KAQYVFNMLVDRGLAPDVITYTIMINGYCRMNK 650
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +Y+ +I + E +KA ++ +V + PDV+T+ I+I+G+CR K A +
Sbjct: 598 PTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHV 657
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M+ +G P+V+++ L+ K D + + +D + +
Sbjct: 658 LGDMKNRGIEPDVITYTVLLNNC---SKIDLRSSSS-----------------SLDAMKS 697
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ ++ L + + P Y L++K C N A+ + +E+ +G P +
Sbjct: 698 KENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVT 757
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
T L+ G + +A L ++ML +GI PD+ T + L
Sbjct: 758 YTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
K N M+ L E K +D +P V Y VLI+ K A+ ++ M+ + PD
Sbjct: 698 KENMMDPSALWSEM--KDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDT 755
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
VT+ L+SG+C A+ LF EM KG P+ + + L
Sbjct: 756 VTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 22/163 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD--------K 208
+ +N + + N+M + M+ P V Y VL+N C + D
Sbjct: 638 YTIMINGYCRMNKMKEAWHVLGDMKNR-GIEPDVITYTVLLNN---CSKIDLRSSSSSLD 693
Query: 209 AL----------GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
A+ + M +KPDV+ + +LI C+ A+ LF EM ++G P
Sbjct: 694 AMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAP 753
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ V++ L+ G+ + V + EM+ G + T +L
Sbjct: 754 DTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 4/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN++I+G+ K R +KAL F M P ++ ++ FC+ A+ +
Sbjct: 96 PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 155
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KGC P++V+FN L+ G + RK E + M GC+ VT ++ GLC
Sbjct: 156 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 215
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS--- 364
++ +A L+ + V P Y L++ LC A EV +++ +G P
Sbjct: 216 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKM-AEGPCPCTEP 274
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ LI GL + R+ EA + ++M GI P VT+N LLE L + DA L
Sbjct: 275 AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTY 334
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ P+ TY IL+S + ++ +E L++ M D+GF+P L + + L+ A
Sbjct: 335 FMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARA 393
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 148/327 (45%), Gaps = 5/327 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + KA + L M +L P+ Y+ ++ F K KA+ + M
Sbjct: 101 YNIIIDGYCKARNIEKALAFLREMEEL-GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM 159
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PD+V FN+L+SG R +K A LFR M +GC P+VV++NT+I G +K
Sbjct: 160 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKL 219
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP---KDFDY 333
DE V + M + + VT L+D LC R+ +A E V + G P +
Sbjct: 220 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYE-VFEKMAEGPCPCTEPAYSV 278
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC G A E+ E+ +G P+V+ TL+EGL K +A L ML
Sbjct: 279 LILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLD 338
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ P+ T+ L+ LC + +A +L KG P + +L+S R R +
Sbjct: 339 QVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDD 398
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
L EM + + N +DG+
Sbjct: 399 AFELYKEMSRINCQQLVGSSNILLDGI 425
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ +A ++++ F +M +P V YN +I G K ++ D+A+ +RM
Sbjct: 171 FNVLLSGLWRARKIHEARELFRSMNSR-GCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM 229
Query: 217 VRDRVKPDVVTFN-------------------------------------ILISGFCRNK 239
++ V P VT+ ILI+G C+ +
Sbjct: 230 KQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKAR 289
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ A +F+EMR +G +P VV++NTL+ G K + + + Y M++ + T E
Sbjct: 290 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYE 349
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
IL+ LC +V +A +L+ +G +P + L+ +L G A E+ E+ +
Sbjct: 350 ILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI 409
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
V + L++G+ R EA +++M GI+PD T++ L+ LC G+ A
Sbjct: 410 NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469
Query: 420 DRL 422
+L
Sbjct: 470 RKL 472
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++ L R + + V ++ PCPC+ E +N KA R
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCT--------EPAYSVLILINGLCKARR 290
Query: 170 MNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ F+ MR GR P+V YN L+ G + + A+ M+ P++
Sbjct: 291 PGEAKEMFQEMR----GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMF 346
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ ILIS C+ + + A L MR+KG P++ + L+ + D+ + EM
Sbjct: 347 TYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ C+ + IL+DG+ G V +A + + + G++P F Y LV LC +G A
Sbjct: 407 SRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKA 466
Query: 347 GIALEVVDELWKKG 360
A ++V+EL + G
Sbjct: 467 DQARKLVEELVRDG 480
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 116/313 (37%), Gaps = 71/313 (22%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG------------- 290
A + EM+ G +P+V S LIRGFF F G + M+E G
Sbjct: 13 AEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS 72
Query: 291 ---------------------CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
C + V+ I++DG C + KA + + G P
Sbjct: 73 CLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPT 132
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y +V+ C GN A++V E+ KG P ++ L+ GL R RK EA L
Sbjct: 133 PHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFR 192
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH---------- 439
M G PD VT+N ++ LC + +A L + + P +TY
Sbjct: 193 SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFA 252
Query: 440 ---------------------------ILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
IL++G + R E + + EM G P + T
Sbjct: 253 RLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312
Query: 473 YNSYMDGLSNARK 485
YN+ ++GL + K
Sbjct: 313 YNTLLEGLLSTAK 325
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ KL A +V+E+ G P V + LI G + +++ML+ G+
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+++ +N L+ LC G +A+ L + P+ ++Y+I++ GY + ++
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESY-LKRMPQHCAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 457 LVNEMLDEGFIPDLATYNS 475
+ EM + G P Y+S
Sbjct: 120 FLREMEELGHPPTPHAYSS 138
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 6/303 (1%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ +N+L+ K + + + Y +M + P+ T NILI+ C + L
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+ +G P+VV++ +LI+G E + E + M +LGC + VT L+ GLC
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 309 GRV---LKACELVIDFSRRGVL---PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G + LK + +++ + + P F Y ++++LC G A + +E+ +G
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P V+ + LI+ L + +EA +E M+ GI+PD TF L+E C VG A L
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
L +KG +PD ++Y +L+ GY + +E L NEML G PD+ T+ + GL
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389
Query: 483 ARK 485
A K
Sbjct: 390 AGK 392
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 161 VNAFVKANRMNDGLLAFEA-MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N NR+ +GL A MR+ P V Y LI G +A + RM +
Sbjct: 133 INCLCNVNRVREGLSAMAGIMRR--GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKL 190
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREK------GCNPNVVSFNTLIRGFFGE 273
P+VVT+ LI G CR +LAL L +EM C PN+ S+N +I
Sbjct: 191 GCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKI 250
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K+ E + EM++ G VT L+D LC EG V++A + + RG++P F +
Sbjct: 251 GKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTF 310
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+E C G+ A E+ + KG P VI+ T LI G + EA L +ML+
Sbjct: 311 TSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLR 370
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD TF LL+ L G+ DA +L + + + + + G + E
Sbjct: 371 VGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFE 430
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L NE+ D+ ++N +DGL ARK
Sbjct: 431 AMELFNELKSYNMKLDIESFNCLIDGLCKARK 462
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 2/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP V ++ LI+ K +A F + M+ + PD+ TF LI GFC D A
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF M KG P+V+S+ LI G+ +E + + EM+ +G T +L+ GL
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGL-VEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G+V A +L + +PK+ + ++ LC G A+E+ +EL +
Sbjct: 389 LAGKVGDAKKL-FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDI 447
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ LI+GL + RK A L EK+ +EG+ PD VT+ ++ C G+ +A+ L +
Sbjct: 448 ESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQM 507
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G P+ +TY L+ G+ + N+ +E L+++M+ + + Y D +S K
Sbjct: 508 MEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEK 567
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
Query: 177 FEAMR-----KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
FEAM K + + + +N LI+G K R+ + A ++++ ++ ++PDVVT+ I+
Sbjct: 429 FEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIM 488
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I+GFC+N + D A LF+ M E GC PN+++++ L+ GF+ K +E V + ++MI+
Sbjct: 489 INGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548
Query: 292 EFSSVTCEILVD 303
++ I+ D
Sbjct: 549 SLAASIYTIVED 560
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++FN LL L + L GL P+ T +IL++ NR +EG + +
Sbjct: 92 ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++ G+IPD+ TY S + GL + TR
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATR 182
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 36/341 (10%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L +G +P++ IYN +IN K A ++ + PD T+ +I G CR
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL +F +M ++GC PN V+++TLI G + +E ++ EMI G ++ TC
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ LC+ G A L +D +G P + Y L+ LC G +A+ + + +
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384
Query: 360 GNLPSVIACTTLIEGL---RRLR-------------------------KGV-------EA 384
G P+ + LI L RR++ KG +A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+M ML+ G + VT+N +++ CD G T A R+ L G PD +Y L+ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + ++ + L NEM+D+G P+ TY + +DG K
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 153/355 (43%), Gaps = 31/355 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + L + MR DG +P Y LI GF K + + A G ++
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMR---DGGCKPDEWSYTELICGFCKISKMESAFGLFN 519
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV D + P+ VT+ LI G+C+++K D A L M+ GC PNV ++N LI G +
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F + MIE G + VT ++DGLC G A E+ +G LP Y
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A + EL + G +P I +IE K A + +M+K
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 395 GILPDSVTFNCLLEDL--------------------CDVG-RTVDADRLRLL-ASTKGLD 432
G P T+ L++ L C G +T D D + ++ A LD
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759
Query: 433 PDGMTYHI---LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
P G++ + LVS + R E L+ M+ +G PD YNS + L R
Sbjct: 760 P-GLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFV 201
S DG+F P ++ +N V+ R+ + M + +G P++ YN +I G+
Sbjct: 382 SRDGVF--PN-TVTYNALINILVENRRIKYAFVVLNLMGR--NGCSPNIVTYNEMIKGYC 436
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ KA+ + M++ ++VT+N +I G+C + AL + MR+ GC P+
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
S+ LI GF K + + EM++ G + VT L+DG C + ++ A L+
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
R G P Y L+ L + N A E+ + ++G P+V+ T +I+GL +
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A + KM+++G LP+ +T++ L+ L G+ +A+ L GL PD +TY +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ Y + + N + M+ G P L TY + GL N
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + R+N+ AF+ +R++I P+ I ++ A + M
Sbjct: 292 INGLCDSGRVNE---AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+P+V T+ LISG C + +A+GLF M G PN V++N LI R+
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M GC + VT ++ G C G KA ++ + +RG Y +++
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C GN AL ++D + G P + T LI G ++ K A GL +M+ +G+ P
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ L++ C + A L G P+ TY++L+ G T++N E L
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
M++EG P++ TY + +DGL
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGL 610
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A R +D + P+V Y LI+G A+G + RM RD V P+ VT+N LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELG 290
+ N++ A + M GC+PN+V++N +I+G+ G+ K + + + M++ G
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK--KAMLVMNNMLQRG 455
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT ++ G C+ G A ++ G P ++ Y L+ C A
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ +E+ G P+ + T LI+G + K A+ L+E M + G P+ T+N L+ L
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
A+ L + +G+ P+ +TY ++ G + + N+M+++G +P+L
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 471 ATYNSYMDGLSNARK 485
TY+S + L K
Sbjct: 636 LTYSSLIRALGQEGK 650
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RM+ + V+P+++ +N +I+ C++ A + +++ E +P+ ++ ++I G
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D + + +M + GCE ++VT L++GLC+ GRV +A +L+ + G+LP
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
G + LC G A + ++ KG P+V T LI GL A GL +M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G+ P++VT+N L+ L + R A + L G P+ +TY+ ++ GY K
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ ++N ML G +L TYN+ + G ++ + R
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 60/377 (15%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
+DG+ CP E + ++ + K +++ E M++ RP+V YNVLI+G K
Sbjct: 523 DDGL--CPN-EVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNVLIHGLTKQ 578
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
F A M+ + + P+VVT+ +I G C+N LAL +F +M E+GC PN++++
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638
Query: 264 NTLIRGFFGERKFDEGVNMAYE-----------------------------------MIE 288
++LIR E K +E N+ E MI+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698
Query: 289 LGCEFSSVTCEILVDGLCNE----GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
GC+ + T +L+ GL NE + L A V+ G D D ++ E
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ G++++V + L+ L + EA+ L+ M+ +G+ PD +N
Sbjct: 759 DPGLSVQVQN---------------ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803
Query: 405 CLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
LL L V R VD A + ST+G + Y L+ + +RRKE ML
Sbjct: 804 SLLCSLLRV-RNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 862
Query: 464 EGFIPDLATYNSYMDGL 480
+ PD +DGL
Sbjct: 863 RTWNPDDVVQAVLIDGL 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 3/302 (0%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
R+L+D R + I+ C + + F D + + ++ + ++ L+ R
Sbjct: 133 RRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSR 192
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ + M +G PN++ +N +I + + + ++ E + T
Sbjct: 193 LGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFT 252
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
++ G C + + A ++ ++ G P Y L+ LC G A +++ E+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G LP+ CT I L + +A L M +G P+ T+ L+ LC G
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 372
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L S G+ P+ +TY+ L++ R K ++N M G P++ TYN +
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432
Query: 478 DG 479
G
Sbjct: 433 KG 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ +D L + G + A + L+ L RL +ML EG+ P+ + +N ++
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G DA+ + + PD TY ++ G+ R++ + N+M EG P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 470 LATYNSYMDGLSNARK 485
TY++ ++GL ++ +
Sbjct: 285 TVTYSTLINGLCDSGR 300
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%)
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D + A +D SV + N L++ + +A M+ + PD +N
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ R + DLA+G+F+ M +GC ++ + LI + E M+
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864
Query: 291 CEFSSVTCEILVDGLCNEG 309
V +L+DGL +G
Sbjct: 865 WNPDDVVQAVLIDGLLRDG 883
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 36/341 (10%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L +G +P++ IYN +IN K A ++ + PD T+ +I G CR
Sbjct: 205 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 264
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL +F +M ++GC PN V+++TLI G + +E ++ EMI G ++ TC
Sbjct: 265 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 324
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ LC+ G A L +D +G P + Y L+ LC G +A+ + + +
Sbjct: 325 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 384
Query: 360 GNLPSVIACTTLIEGL---RRLR-------------------------KGV-------EA 384
G P+ + LI L RR++ KG +A
Sbjct: 385 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA 444
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+M ML+ G + VT+N +++ CD G T A R+ L G PD +Y L+ G
Sbjct: 445 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 504
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + ++ + L NEM+D+G P+ TY + +DG K
Sbjct: 505 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 153/355 (43%), Gaps = 31/355 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + L + MR DG +P Y LI GF K + + A G ++
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMR---DGGCKPDEWSYTELICGFCKISKMESAFGLFN 519
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV D + P+ VT+ LI G+C+++K D A L M+ GC PNV ++N LI G +
Sbjct: 520 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 579
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F + MIE G + VT ++DGLC G A E+ +G LP Y
Sbjct: 580 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 639
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A + EL + G +P I +IE K A + +M+K
Sbjct: 640 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 699
Query: 395 GILPDSVTFNCLLEDL--------------------CDVG-RTVDADRLRLL-ASTKGLD 432
G P T+ L++ L C G +T D D + ++ A LD
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759
Query: 433 PDGMTYHI---LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
P G++ + LVS + R E L+ M+ +G PD YNS + L R
Sbjct: 760 P-GLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 813
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFV 201
S DG+F P ++ +N V+ R+ + M + +G P++ YN +I G+
Sbjct: 382 SRDGVF--PN-TVTYNALINILVENRRIKYAFVVLNLMGR--NGCSPNIVTYNEMIKGYC 436
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ KA+ + M++ ++VT+N +I G+C + AL + MR+ GC P+
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
S+ LI GF K + + EM++ G + VT L+DG C + ++ A L+
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
R G P Y L+ L + N A E+ + ++G P+V+ T +I+GL +
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGST 616
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A + KM+++G LP+ +T++ L+ L G+ +A+ L GL PD +TY +
Sbjct: 617 SLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKM 676
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ Y + + N + M+ G P L TY + GL N
Sbjct: 677 IEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 717
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + R+N+ AF+ +R++I P+ I ++ A + M
Sbjct: 292 INGLCDSGRVNE---AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+P+V T+ LISG C + +A+GLF M G PN V++N LI R+
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M GC + VT ++ G C G KA ++ + +RG Y +++
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C GN AL ++D + G P + T LI G ++ K A GL +M+ +G+ P
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VT+ L++ C + A L G P+ TY++L+ G T++N E L
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
M++EG P++ TY + +DGL
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGL 610
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A R +D + P+V Y LI+G A+G + RM RD V P+ VT+N LI
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELG 290
+ N++ A + M GC+PN+V++N +I+G+ G+ K + + + M++ G
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK--KAMLVMNNMLQRG 455
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT ++ G C+ G A ++ G P ++ Y L+ C A
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ +E+ G P+ + T LI+G + K A+ L+E M + G P+ T+N L+ L
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
A+ L + +G+ P+ +TY ++ G + + N+M+++G +P+L
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635
Query: 471 ATYNSYMDGLSNARK 485
TY+S + L K
Sbjct: 636 LTYSSLIRALGQEGK 650
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RM+ + V+P+++ +N +I+ C++ A + +++ E +P+ ++ ++I G
Sbjct: 203 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 262
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D + + +M + GCE ++VT L++GLC+ GRV +A +L+ + G+LP
Sbjct: 263 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
G + LC G A + ++ KG P+V T LI GL A GL +M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G+ P++VT+N L+ L + R A + L G P+ +TY+ ++ GY K
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ ++N ML G +L TYN+ + G ++ + R
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 60/377 (15%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
+DG+ CP E + ++ + K +++ E M++ RP+V YNVLI+G K
Sbjct: 523 DDGL--CPN-EVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNVLIHGLTKQ 578
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
F A M+ + + P+VVT+ +I G C+N LAL +F +M E+GC PN++++
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638
Query: 264 NTLIRGFFGERKFDEGVNMAYE-----------------------------------MIE 288
++LIR E K +E N+ E MI+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698
Query: 289 LGCEFSSVTCEILVDGLCNE----GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
GC+ + T +L+ GL NE + L A V+ G D D ++ E
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 758
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ G++++V + L+ L + EA+ L+ M+ +G+ PD +N
Sbjct: 759 DPGLSVQVQN---------------ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803
Query: 405 CLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
LL L V R VD A + ST+G + Y L+ + +RRKE ML
Sbjct: 804 SLLCSLLRV-RNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 862
Query: 464 EGFIPDLATYNSYMDGL 480
+ PD +DGL
Sbjct: 863 RTWNPDDVVQAVLIDGL 879
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 3/302 (0%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
R+L+D R + I+ C + + F D + + ++ + ++ L+ R
Sbjct: 133 RRLVDARRYAAAGRARIHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSR 192
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ + M +G PN++ +N +I + + + ++ E + T
Sbjct: 193 LGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFT 252
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
++ G C + + A ++ ++ G P Y L+ LC G A +++ E+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G LP+ CT I L + +A L M +G P+ T+ L+ LC G
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 372
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L S G+ P+ +TY+ L++ R K ++N M G P++ TYN +
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432
Query: 478 DG 479
G
Sbjct: 433 KG 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ +D L + G + A + L+ L RL +ML EG+ P+ + +N ++
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G DA+ + + PD TY ++ G+ R++ + N+M EG P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 470 LATYNSYMDGLSNA 483
TY++ ++GL ++
Sbjct: 285 TVTYSTLINGLCDS 298
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%)
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D + A +D SV + N L++ + +A M+ + PD +N
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 804
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ R + DLA+G+F+ M +GC ++ + LI + E M+
Sbjct: 805 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 864
Query: 291 CEFSSVTCEILVDGLCNEG 309
V +L+DGL +G
Sbjct: 865 WNPDDVVQAVLIDGLLRDG 883
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 182/417 (43%), Gaps = 19/417 (4%)
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSY 123
P+ N + P+ L HF++ H + F W S+ F D ++ + +L +
Sbjct: 120 PSFNFLDPTFLSHFVE-----HQKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEAG 174
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
+ S L+ + NP P S + C K + + + F + K
Sbjct: 175 ACNAAKSFLDSTNFNPKPASLEAYIRC-------------LCKGGLVEEAISVFGQL-KG 220
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I S++ +N ++ G V+ D Y MV V DV T L+ FC +
Sbjct: 221 IGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISD 280
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
L R + E G P +FN LI GF ++ + ++ + MI T + +V+
Sbjct: 281 GHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVN 340
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC G+ + + D RG P Y ++ LC G A ++ E+ +KG LP
Sbjct: 341 GLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLP 400
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ +I G ++ EA + +M +G +V++N +++ LC G+ +A L
Sbjct: 401 NEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLF 460
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
S KG+ + +TY+ LV G+ +E + EG NL+ E+LD+G P A+Y +D L
Sbjct: 461 EEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKL 517
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ V AF NR++DG R L DG P + +N LI+GF K + + + M+
Sbjct: 267 YLVQAFCDENRISDGHNLLR--RVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMI 324
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
PD+ T+ +++G C+ K +F++++++G P+ V + T+I G +
Sbjct: 325 ARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLG 384
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + +EMI+ G + T ++ G G + +A ++ + +G K Y ++
Sbjct: 385 DARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMI 444
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ LC G A ++ +E+ KG L + I L+ G + K VE + L+ ++L +GI
Sbjct: 445 KGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQ 504
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P + ++ L++ LC G +A L +G++P T+ +++G+ ++ EG
Sbjct: 505 PSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEW 564
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSN 482
+ ML P ++ S + LS
Sbjct: 565 LTTMLRSKLRPQKKSFESLIQCLSQ 589
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ VN K + +G F+ ++ P +Y +I+G + + A + M
Sbjct: 335 YQEVVNGLCKGGKGPEGFRVFKDLKDR-GYAPDRVMYTTMIHGLCRMKWLGDARKLWFEM 393
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ T+N +I G+ + + A ++REM +KG VS+N +I+G K
Sbjct: 394 IQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKI 453
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E ++ EM G + +T LV G C EG++++ L+ + +G+ P Y L
Sbjct: 454 KEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPL 513
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++KLC EG+ A + D++ +G P+V +I G + +E + ML+ +
Sbjct: 514 IDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKL 573
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA 419
P +F L++ L + R DA
Sbjct: 574 RPQKKSFESLIQCLSQIDRLDDA 596
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 2/238 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
L FE ++K P+ YN +I+G+ K ++A Y M V++N++I G
Sbjct: 389 LWFEMIQKGF--LPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKG 446
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C + K A LF EM KG N +++N L+RGF E K EG N+ YE+++ G + S
Sbjct: 447 LCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPS 506
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ + L+D LC EG + A L D RG+ P + ++ C +G A +E +
Sbjct: 507 AASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLT 566
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ + P + +LI+ L ++ + +A +++ MLK G N L+ LC+
Sbjct: 567 TMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCE 624
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 126/298 (42%), Gaps = 3/298 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P S NVL + V+ + A F D P + I C+ + A+ +
Sbjct: 158 PDSSSCNVLFDALVEAGACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGLVEEAISV 214
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +++ G ++ ++N+++RG + D + EM+E T LV C+
Sbjct: 215 FGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCD 274
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E R+ L+ GV+P++ + L+ C + G +++ + + P +
Sbjct: 275 ENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFT 334
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++ GL + KG E + + + G PD V + ++ LC + DA +L
Sbjct: 335 YQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMI 394
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG P+ TY+ ++ GY + +E + EM D+G+ +YN + GL + K
Sbjct: 395 QKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGK 452
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 166/323 (51%), Gaps = 6/323 (1%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV--LINGFVKCREFDKALGFYDRMVRD 219
N K R + LAF RK+++ ++ ++ L+ +V+ R+ A G M++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+V NIL+ G CRN + A+ L REMR P+V S+NT+IRGF ++ ++
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +A EM GC +S VT IL+D C G++ +A + + G+ Y L+
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 340 L--CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
CGE + G AL DE+ ++G+ P I TLI G +L + EAS + E M++ G+
Sbjct: 257 FCDCGELDRGKAL--FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ T+ L++ LC VG+T +A + L K +P+ +TY+I+++ ++ + +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
V M PD TYN + GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGL 397
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN +I GF + +E +KAL + M +VT+ ILI FC+ K D A+G
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM+ G ++V + +LIRGF + D G + E++E G ++T L+ G C
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A E+ RGV P + Y GL++ LCG G AL+ ++ + +K P+ +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVT 354
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+I L + +A ++E M K PD++T+N LL LC G +A +L +L
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ DPD ++Y+ L+ G +ENR + ++ + ++++ D T N
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 38/356 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF KA +M++ + + M K + + +Y LI GF C E D+ +D ++
Sbjct: 219 IDAFCKAGKMDEAMGFLKEM-KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P +T+N LI GFC+ + A +F M E+G PNV ++ LI G G K E +
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
MIE E ++VT I+++ LC +G V A E+V +R P + Y L+ L
Sbjct: 338 QPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 341 CGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEG 395
C +G+ A +++ + K + P VI+ LI GL RL + ++ L+ + L G
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 396 --------------------------------ILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I+ +S T+ +++ C G A L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L P Y+ L+S +E + L EM + PD+ ++N +DG
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 16/335 (4%)
Query: 151 PEMERIFHFAVNAFVKAN-----RMNDGLLAF----EAMRKL-----IDGRPSVSIYNVL 196
E IF F + V+ N + DGL EA++ L D P+ YN++
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNII 358
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
IN K A+ + M + R +PD +T+NIL+ G C D A L M +
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 257 --NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+P+V+S+N LI G E + + +++ ++E VT IL++ G V KA
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
EL S ++ Y +++ C G +A ++ ++ PSV L+
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + +A L E+M ++ PD V+FN +++ G A+ L + S GL PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++ + + E + ++M+D GF PD
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++ R++ +LA +R+M E N VS + L+ + RK + M++ G
Sbjct: 78 LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
F+ IL+ GLC KA L+ + R ++P F Y ++ C AL
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E+ +E+ G S++ LI+ + K EA G +++M G+ D V + L+
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
CD G L +G P +TY+ L+ G+ + + KE + M++ G P++
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 471 ATYNSYMDGLSNARKS 486
TY +DGL K+
Sbjct: 318 YTYTGLIDGLCGVGKT 333
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K NR++ L ++ + + + V+ N+L+N +K + +KA+ + ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQI 485
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + T+ +I GFC+ ++A GL +MR P+V +N L+ E
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM V+ I++DG G + A L++ SR G+ P F Y L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ + G A+ D++ G P C ++++ + + + L++K++ + I
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+ D +++ +C+ +D + RLL T
Sbjct: 666 VLDKELTCTVMDYMCNSSANMDLAK-RLLRVT 696
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 159/332 (47%), Gaps = 4/332 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK---CREFDKALGFY 213
F+ +N KA ++N E + K P++ YN LI+G K + +A
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAIL 261
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M+ +++ P+ +TFN LI GFC+++ A F EM+ +G PN+V++N+LI G
Sbjct: 262 KEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K DE + + +M+ LG + + VT L++G C + + +A +L D + + ++P +
Sbjct: 322 GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ C G + + + +G P+V LI GL R + A L+ +M
Sbjct: 382 NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ D VT+N L+ C G A++L G+ P+ +TY+ L+ GY E K
Sbjct: 442 YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKA 501
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M EG ++ TYN + G K
Sbjct: 502 ALKVRTQMEKEGKRANVVTYNVLIKGFCKTGK 533
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 158/322 (49%), Gaps = 20/322 (6%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
CP E F+ ++ F K + AFE M++ G +P++ YN LING + D+
Sbjct: 270 CPN-EITFNTLIDGFCKDENVLAAKNAFEEMQR--QGLKPNIVTYNSLINGLSNNGKLDE 326
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ +D+MV +KP++VTFN LI+GFC+ K A LF ++ E+ PN ++FNT+I
Sbjct: 327 AIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMID 386
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
F +EG + M++ G + T L+ GLC V A +L+ + +
Sbjct: 387 AFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKA 446
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L+ C +G A +++ E+ G P+ + TL++G A +
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+M KEG + VT+N L++ C G+ DA+RL KGL+P+ TY ++
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRL----- 561
Query: 449 NRRKEGENLVNEMLDEGFIPDL 470
EML++GFIPD+
Sbjct: 562 -----------EMLEKGFIPDI 572
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 145/287 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +N LI+GF K A ++ M R +KP++VT+N LI+G N K D A+ L
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M G PN+V+FN LI GF ++ E + ++ E +++T ++D C
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCK 390
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + + L G+ P Y L+ LC N A ++++E+ V+
Sbjct: 391 AGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVT 450
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G + + +A L+ +ML G+ P+ VT+N L++ C G A ++R
Sbjct: 451 YNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME 510
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+G + +TY++L+ G+ + + ++ L+NEML++G P+ TY+
Sbjct: 511 KEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 191/440 (43%), Gaps = 68/440 (15%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPC--------------- 140
F W+ + T ++ LA+S ++S++ S L+ + N
Sbjct: 65 FQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGD 124
Query: 141 -PCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLI 197
PC+N I + + + +++ A E R++ D + S++ N L+
Sbjct: 125 RPCANALITDMLVLAYVTNLEIHS------------ACEVFRRVQDYGFKLSLNSCNPLL 172
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+ VK E + Y M++ R++P++ TFNI I+G C+ K + A + +++ G +
Sbjct: 173 SALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFS 232
Query: 258 PNVVSFNTLIRGFFGE---RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
PN+V++NTLI G + K + EM+ + +T L+DG C + VL A
Sbjct: 233 PNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAA 292
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+ R+G+ P Y L+ L G A+ + D++ G P+++ LI G
Sbjct: 293 KNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALING 352
Query: 375 LRRLRKGVEA----------------------------SGLMEK-------MLKEGILPD 399
+ + EA +G+ME+ ML EGI P+
Sbjct: 353 FCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPN 412
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+NCL+ LC A +L L D +TY+IL+ G+ ++ + E L+
Sbjct: 413 VSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472
Query: 460 EMLDEGFIPDLATYNSYMDG 479
EML+ G P+ TYN+ MDG
Sbjct: 473 EMLNVGVKPNHVTYNTLMDG 492
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 19/286 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N ++++ + ++ M L +P++ +N LINGF K + +A +D +
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGL-GLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+ +TFN +I FC+ + L M ++G PNV ++N LI G +
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNV 429
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM + VT IL+ G C +G KA +L+ + GV P Y L
Sbjct: 430 RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EGN AL+V ++ K+G +V+ LI+G + K +A+ L+ +ML++G+
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD--GMTYHI 440
P+ T+ D RL +L KG PD G Y+I
Sbjct: 550 NPNRTTY--------------DVVRLEMLE--KGFIPDIEGHLYNI 579
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 55/332 (16%)
Query: 204 REFDKALGFYDRMVR-----------------DRVKPDVVTFNILISGFCRNKKFDLALG 246
+++ K F D++V+ DR + + ++L+ + N + A
Sbjct: 92 KKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACE 151
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+FR +++ G ++ S N L+ + E + EMI+ + + T I ++GLC
Sbjct: 152 VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLC 211
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG------------------- 347
G++ KA +++ D G P Y L++ C +G+AG
Sbjct: 212 KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICP 271
Query: 348 -------------------IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
A +E+ ++G P+++ +LI GL K EA L
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+KM+ G+ P+ VTFN L+ C +A +L + + L P+ +T++ ++ + +
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+EG L N MLDEG P+++TYN + GL
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++GFVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G+ P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ G EG + A + ++ G+ P + L+
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+ +G PD TY + +DG
Sbjct: 303 IMKGLKPDKITYTTLIDG 320
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 5/330 (1%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F P + +N+F NR+ + KL +PS + + LI G +
Sbjct: 39 FGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKL-GYQPSTATFTTLIRGLCVEGKIG 97
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+AL +D+M + +PDV+T+ LI+G C++++ AL LF +M KG +PN ++++LI
Sbjct: 98 EALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 157
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL---KACELVIDFSRR 324
G + E + + Y MI +T LVD LC EG + KA L + S++
Sbjct: 158 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQ 217
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G++P Y L+ LC G A+ + E+ G +P ++ L + L + + EA
Sbjct: 218 GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEA 277
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L++ + + PD ++ +++ +C G A L S+KGL PD TY I+++G
Sbjct: 278 MVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMING 337
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYN 474
++ E L EM DE I +T++
Sbjct: 338 LCQQGLLAEASKLFGEM-DENDIESYSTFS 366
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 3/290 (1%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N+LIN F A +++ +P TF LI G C K AL LF +M
Sbjct: 49 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 108
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P+V+++ TLI G +R+ E +++ +M+ G ++ T L+ GLC G +
Sbjct: 109 EGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE 168
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI---ALEVVDELWKKGNLPSVIACTT 370
A L R ++P + LV+ LC EG I A+ + +E+ ++G +P + T
Sbjct: 169 AIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNT 228
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + + +A L +M+ G +PD VT+ L + LC R +A L +
Sbjct: 229 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 288
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
LDPD Y I++ G R + +L +++ +G PD+ TY ++GL
Sbjct: 289 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGL 338
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 3/299 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L+ + + + L Y +M + + T NILI+ FC + A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ + G P+ +F TLIRG E K E + + +M G + +T L++GLC
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ ++ +A L D +G+ P +F Y L+ LC G+ A+ + + + +P +
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 368 CTTLIEGLRR---LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TL++ L + ++ +A GL E+M ++G++PD+VT+N L+ LC VGR DA L
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G PD +TY IL + +R E L+ + PD+ Y+ MDG+ A
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 306
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R R P +V F+ L++ R K + L L+++M G N + N LI F +
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ ++++LG + S+ T L+ GLC EG++ +A +L + G P Y
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC + AL + ++ KG P+ ++LI GL L EA L M+
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLL---ASTKGLDPDGMTYHILVSGYTRENRRK 452
I+PD +TFN L++ LC G D+ L S +GL PD +TY+ L+ G R +
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 240
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L +EM+ G IPDL TY D L
Sbjct: 241 DAIALFHEMVVYGQIPDLVTYRILFDYL 268
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR-----TV 417
PS++ + L+ + R++ L ++M GI ++ T N L+ C + R +V
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
D L+L G P T+ L+ G E + E L ++M EGF PD+ TY + +
Sbjct: 68 LGDILKL-----GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLI 122
Query: 478 DGLSNARK 485
+GL R+
Sbjct: 123 NGLCKDRQ 130
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 178 EAM--RKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
EAM K+I+G P + IY+++++G + E + A + ++ + PDV T+ I+I
Sbjct: 276 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 335
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+G C+ A LF EM E ++ S++T R F
Sbjct: 336 NGLCQQGLLAEASKLFGEMDEN----DIESYSTFSRNAF 370
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 2/303 (0%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E ++K I+ P V IY +IN K +A +D M R+ P+ T+ LI+G C+
Sbjct: 287 EMLKKGIE--PDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ A + +M+ KG + N V FNTL+ G+ + DE + + M + G E + T
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 404
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
C I+ G C R +A L++ RGV P + L++ C E N A + +
Sbjct: 405 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 464
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
KKG PSV+ IE + K EA L+ +M + G++PD+ T+ L++ G
Sbjct: 465 KKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVD 524
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L GL+ + +TY +++SG +++ R E L +EM EG +PD Y+S +
Sbjct: 525 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584
Query: 478 DGL 480
L
Sbjct: 585 ASL 587
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 121/223 (54%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
I+N L++G+ K D+AL + M + + D T NI+ SGFCR+ + + A L M
Sbjct: 369 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 428
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E+G PNVVSF+ LI + E+ F E + M + G S VT ++ C +G++
Sbjct: 429 EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKM 488
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A +L+ + RG++P + Y L++ GN ALE+ +E+ + G +V+ T +
Sbjct: 489 EEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVI 548
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
I GL + + EA L ++M KEGI+PD ++ L+ L VG
Sbjct: 549 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 150/344 (43%), Gaps = 41/344 (11%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L E +R+++D + + + +++G K E +A D +V KP V+T+N L+
Sbjct: 175 LCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLL 234
Query: 233 SG-----------------------------------FCRNKKFDLALGLFREMREKGCN 257
+G + R+ K + A LF EM +KG
Sbjct: 235 NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE 294
Query: 258 PNVVSFNTLIRG--FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+V + ++I FG K + EM E ++ T L++G C G + A
Sbjct: 295 PDVYIYTSIINWNCKFGNMK--RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 352
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+V D +GV + L++ C +G AL + + + +KG C + G
Sbjct: 353 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGF 412
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R + EA L+ M + G+ P+ V+F+ L++ C +A RL + KG P
Sbjct: 413 CRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSV 472
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY+ + Y ++ + +E L+NEM + G +PD TY S +DG
Sbjct: 473 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++L + N+ FD +L +F R+KG + S + + V +M++
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 185
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G E + +VDGLC +G V++A L+ + +G P Y L+ + G
Sbjct: 186 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 245
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
E++ + K +V T LIE R K EA L ++MLK+GI PD + ++
Sbjct: 246 VNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIIN 305
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G A L + + L P+ TY L++G + K E +VN+M +G
Sbjct: 306 WNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDV 365
Query: 469 DLATYNSYMDG 479
+ +N+ MDG
Sbjct: 366 NRVIFNTLMDG 376
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +++LI+ + K + F +A + M + P VVT+N I +C+ K + A L
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 494
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E+G P+ ++ +LI G D + + EM +LG + VT +++ GL
Sbjct: 495 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 554
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE-VVDEL 356
+GR +A +L + ++ G++P D Y L+ L G LE VVD +
Sbjct: 555 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 604
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 173/423 (40%), Gaps = 88/423 (20%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN--------DGIFSCPEMER 155
S + D L + L + +F+E+ +VL FI + SN G F+ P +
Sbjct: 63 SRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVE 122
Query: 156 IFHFAVNAFVKANRMNDGLL-AFEAMRKL---IDGRPSVSIYNVLINGFVKCREFDKALG 211
F + NRM D L F+ RK ID R S + L+ + + +
Sbjct: 123 KFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDER---SCFEFLL-ALKRSGNMELCVE 178
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F +MV ++ V ++ ++ G C+ + A L E+ KG P+V+++NTL+ G+
Sbjct: 179 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 238
Query: 272 GERKFDEGVNMAYEMIELGC-EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E K GVN ++E +++ T +L++ ++ +A
Sbjct: 239 -EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA---------------- 281
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE------GLRR------- 377
EKL DE+ KKG P V T++I ++R
Sbjct: 282 -------EKL------------FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322
Query: 378 ---------------LRKGVEASGLMEK-------MLKEGILPDSVTFNCLLEDLCDVGR 415
L G +G M+ M +G+ + V FN L++ C G
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+A RL+ + KG + D T +I+ SG+ R NRR+E + L+ M + G P++ +++
Sbjct: 383 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 442
Query: 476 YMD 478
+D
Sbjct: 443 LID 445
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
+ L R + R FD + + + G E +C + L G + EL ++F R
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNM----ELCVEFLR 181
Query: 324 R----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ G+ + + +V+ LC +G A ++DEL KG PSVI TL+ G ++
Sbjct: 182 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 241
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ ++ M K + + T+ L+E + +A++L KG++PD Y
Sbjct: 242 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 301
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++ + K L +EM + +P+ TY + ++G A
Sbjct: 302 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 149/303 (49%), Gaps = 3/303 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++ YN+LI GF +D M++ ++ P+VVTF++LI F + K A L
Sbjct: 395 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 454
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+EM +G P+ +++ +LI GF E D+ M M+ GC+ + T IL++G C
Sbjct: 455 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 514
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
R+ EL S RGV+ Y L++ C G +A E+ E+ + P+++
Sbjct: 515 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 574
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L++GL + +A + EK+ K + D +N ++ +C+ + DA L
Sbjct: 575 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 634
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD---GLSNARK 485
KG+ P TY+I++ G ++ E E L +M ++G PD TYN + G +A K
Sbjct: 635 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 694
Query: 486 SVR 488
SV+
Sbjct: 695 SVK 697
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 157/330 (47%), Gaps = 5/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F A R +DG M RK+ P+V ++VLI+ FVK + +A +
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKI---NPNVVTFSVLIDSFVKEGKLREAEELHK 455
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PD +T+ LI GFC+ D A + M KGC+PN+ +FN LI G+
Sbjct: 456 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 515
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + +M G +VT L+ G C G++ A EL + R V P Y
Sbjct: 516 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 575
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G + ALE+ +++ K + +I G+ K +A L + +
Sbjct: 576 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 635
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P T+N ++ LC G +A+ L G PDG TY+IL+ + + +
Sbjct: 636 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 695
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ E+ GF D +T +D LS+ +
Sbjct: 696 VKLIEELKRCGFSVDASTIKMVIDMLSDDK 725
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 157/325 (48%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN + + + +L + M + +P+ Y ++N K + A+ +M
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 356
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K D V ++I+I G C++ D A LF EM KG N++++N LI GF ++D+G
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +MI+ + VT +L+D EG++ +A EL + RG+ P Y L++
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C E + A ++VD + KG P++ LI G + + + L KM G++ D+
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C++G+ A L ++ + P+ +TY IL+ G ++ + +
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
+ D+ YN + G+ NA K
Sbjct: 597 IEKSKMELDIGIYNIIIHGMCNASK 621
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 182/376 (48%), Gaps = 4/376 (1%)
Query: 114 FIVRSLAS----SYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
FI R +A+ SYR +++ + + D I S P I + + + +
Sbjct: 141 FIARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTK 200
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
D +LA +L ++ +++IN F +CR+ A ++++ +P+ +TF+
Sbjct: 201 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 260
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI+G C + AL L M E G P++++ NTL+ G K E + + +M+E
Sbjct: 261 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 320
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC+ ++VT +++ +C G+ A EL+ R + Y +++ LC G+ A
Sbjct: 321 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 380
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ +E+ KG ++I LI G + + + L+ M+K I P+ VTF+ L++
Sbjct: 381 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 440
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G+ +A+ L +G+ PD +TY L+ G+ +EN + +V+ M+ +G P+
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500
Query: 470 LATYNSYMDGLSNARK 485
+ T+N ++G A +
Sbjct: 501 IRTFNILINGYCKANR 516
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 40/363 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F + ++ LAF AM K+I P+ ++ LING +AL DRMV
Sbjct: 228 INCFCRCRKL---CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 284
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF--------------- 263
KPD++T N L++G C + K A+ L +M E GC PN V++
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344
Query: 264 --------------------NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+ +I G D N+ EM G + +T IL+
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 404
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G CN GR +L+ D +R + P + L++ EG A E+ E+ +G P
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 464
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I T+LI+G + +A+ +++ M+ +G P+ TFN L+ C R D L
Sbjct: 465 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 524
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
S +G+ D +TY+ L+ G+ + + L EM+ P++ TY +DGL +
Sbjct: 525 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584
Query: 484 RKS 486
+S
Sbjct: 585 GES 587
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C R F+ +N + KANR++DGL F M L YN LI GF + + + A
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLNVA 555
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ MV +V P++VT+ IL+ G C N + + AL +F ++ + ++ +N +I G
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
K D+ ++ + G + T I++ GLC +G + +A L G P
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+ Y L+ G+G+A ++++++EL + G
Sbjct: 676 GWTYNILIRAHLGDGDATKSVKLIEELKRCG 706
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 32/331 (9%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ IYN +IN K A +++ + +KPD T+ +I G+CRN+ D A
Sbjct: 225 QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE 284
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M E+GC PN +++TLI G + +E ++ EM G + T + LC
Sbjct: 285 IFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC 344
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDY-------------FGLVEKLCGEG--------N 345
+ GR+ A ++ ID ++G P + Y GL ++ +G N
Sbjct: 345 DMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYN 404
Query: 346 AGI-----------ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
A + AL V + + K G LP+ + LI G + +A ++ MLK
Sbjct: 405 ALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKG 464
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
P VT+N +++ CD G T A R+ L G PD +Y L+SG+ + ++ +
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELA 524
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ NEM+D G P+ TY + + G K
Sbjct: 525 SGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N ++ ++ L+ F M K P+ S YN LI G+ + +KA+ M
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKH-GCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ R P +VT+NI+I G+C + D+A+ + M+ GC P+ S+ LI GF K
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M EM++ G + VT L+ G C + ++ A ++ R G P Y L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L + N A E+ + ++ P V+ +T+I GL A + KM+K G
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LP+ T++ L++ L GR +A+ + +GL PD +TY ++ + +
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
+ EM++ G P L TY+ + GL N
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGLQN 727
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 34/341 (9%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE ++ + P+ + Y+ LING ++AL F M R V P V TF I
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER------------------- 274
C + + A +F +M++KGC PNV ++ +LI G R
Sbjct: 342 ALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTV 401
Query: 275 KFDEGVNMAYEMIEL-------------GCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++ +N+ E +E+ GC ++ + L+ G C G KA ++ +
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+ P Y +++ C G+ +A+ V++ + G P + T LI G ++ K
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
ASG+ +M+ G+ P+ VT+ L+ C + A R+ G P+ TY++L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G T++N E L ML+E PD+ TY++ ++GL N
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCN 622
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 174/375 (46%), Gaps = 14/375 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ T+ ++ L +S R +E L+FIS + G+ P + F + A
Sbjct: 297 NAATYSTLINGLCNSGRVNE---ALDFISE----MTRHGVL--PTVH-TFTAPIVALCDM 346
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R+ D F M+K +P+V Y LI+G R A+G + RM RD V P+ VT
Sbjct: 347 GRIEDAWKIFIDMKKK-GCKPNVYTYTSLISGQRVSR---MAIGLFHRMSRDGVVPNTVT 402
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N L++ N + D AL +F M + GC PN S+N LIRG+ ++ ++M M+
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ + VT I++ G C+ G A ++ G P ++ Y L+ C
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKME 522
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+A + +E+ +G P+ + T LI G + K A+ ++E+M + G P+ T+N L+
Sbjct: 523 LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLI 582
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L A+ L + + + PD +TY +++G + N+M+ G +
Sbjct: 583 HGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL 642
Query: 468 PDLATYNSYMDGLSN 482
P+L TY+S + L
Sbjct: 643 PNLHTYSSLIQALGQ 657
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 20/313 (6%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + ++ GRP+ ++ YN++I G+ + D A+ + M + +PD ++ LIS
Sbjct: 454 AMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GFC+ K +LA G+F EM ++G PN V++ LI G+ + K D M M GC
Sbjct: 514 GFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRP 573
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T +L+ GL + A EL + P Y ++ LC G +ALE+
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+++ K G LP++ ++LI+ L + + EA + ++ K+G++PD VT+ ++E +C +
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE-VCVM 692
Query: 414 GRTVDA--DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI--PD 469
VD D L + + G P TY +L+ G L NEM+ + P+
Sbjct: 693 SGKVDRAFDFLGEMINA-GCQPTLQTYDVLIKG------------LQNEMVYHKLVALPN 739
Query: 470 LATYNSYMDGLSN 482
A+ +++ D + N
Sbjct: 740 AASTSTFDDQIIN 752
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 145/291 (49%), Gaps = 3/291 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L+ K + Y +++R+ ++P+++ +N +I+ C++ A + ++
Sbjct: 196 YTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVF 255
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P+ ++ ++I G+ R D + M E GCE ++ T L++GLCN GRV
Sbjct: 256 KSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVN 315
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + + + +R GVLP + + LC G A ++ ++ KKG P+V T+LI
Sbjct: 316 EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G R R + GL +M ++G++P++VT+N L+ L + A + + G
Sbjct: 376 SGQRVSRMAI---GLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +Y+ L+ GY ++ +++ ML P L TYN + G ++
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDS 483
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 14/320 (4%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+R+ A+ F + +R DG++ P+ YN L+N ++ E D AL +
Sbjct: 378 QRVSRMAIGLFHRMSR--DGVV------------PNTVTYNALMNVLMENMEIDSALIVF 423
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M + P+ ++N LI G+C + A+ + M + P +V++N +I+G+
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDS 483
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D + + M GC+ + L+ G C ++ A + + RG+ P + Y
Sbjct: 484 GDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTY 543
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ C + A +++ + + G P+V LI GL + A L + ML+
Sbjct: 544 TALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE 603
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
E I PD VT++ ++ LC+ G A + G P+ TY L+ +E R +E
Sbjct: 604 EKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEE 663
Query: 454 GENLVNEMLDEGFIPDLATY 473
E + +E+ +G IPD TY
Sbjct: 664 AEEMFSELKKQGLIPDEVTY 683
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 92/389 (23%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y LI+GF K + + A G ++ M+ + P+ VT+ LISG+C+++K D A
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M+ GC PNV ++N LI G + F + M+E VT +++GLC
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621
Query: 307 N-----------------------------------EGRVLKACELVIDFSRRGVLPKDF 331
N EGRV +A E+ + ++G++P +
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---------LRKGV 382
Y ++E G A + + E+ G P++ LI+GL+ L
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAA 741
Query: 383 EASGLMEKMLKEGILP-------------DSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
S ++++ + ++ ++ LL L GR +A+ L ++
Sbjct: 742 STSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQ 801
Query: 430 GLDPDGMTY-HILVS---------------------------GYT-------RENRRKEG 454
P+ TY H L+S GY + +RRKE
Sbjct: 802 SQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEA 861
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +ML D + ++GL A
Sbjct: 862 RFVFEKMLSRALNADEIVWTILINGLLGA 890
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
AL +D ++G + TTL+ L +L ++L+EG+ P+ + +N ++
Sbjct: 177 ALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G DA+ + G+ PD TY ++ GY R + N M +EG P
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEP 296
Query: 469 DLATYNSYMDGLSNA 483
+ ATY++ ++GL N+
Sbjct: 297 NAATYSTLINGLCNS 311
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 79/175 (45%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++ N+ + +A + FS+RG F Y L+ +L ++ ++ ++G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+++ ++I L + +A ++ K+ K G+ PD+ T+ ++ C A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+ +G +P+ TY L++G R E + ++EM G +P + T+ +
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTA 338
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 176/354 (49%), Gaps = 40/354 (11%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++N+ + FE+M I RP S+ ++ L + + +E+D LGF M + ++ ++
Sbjct: 49 KVNEAIDLFESM---IQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMY 105
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T NI+I+ FCR +K A + + G PN ++F+TLI GF E + E V + M
Sbjct: 106 TMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRM 165
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+ + VT L++GLC +GRV +A L+ + G + Y ++ ++C GN
Sbjct: 166 VEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNT 225
Query: 347 GIALE-------------------VVDELWKKGNL----------------PSVIACTTL 371
+AL+ V+D L K GNL V+A +++
Sbjct: 226 ALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSI 285
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL + + + ++ +M+ I+P+ VTF+ L++ G+ ++A L +G+
Sbjct: 286 IGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY L+ G+ +ENR E +++ M+ +G P++ TY+ ++ A++
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 164/326 (50%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N F R+++ + + M ++ RP+V N LING +AL DRM
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEM-KYRPNVVTVNTLINGLCLKGRVTEALVLIDRM 200
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ + + +T+ +++ C++ LAL LFR+M E+ +VV ++ +I +
Sbjct: 201 VKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNL 260
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ +++ EM G + V ++ GLCN+GR +++ + R ++P + L
Sbjct: 261 DDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSAL 320
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ +E+ +G P I ++LI+G + + EA+ +++ M+ +G
Sbjct: 321 IDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC 380
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT++ L+ C R + RL S+KGL D +TY+ LV G+ + + +
Sbjct: 381 EPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKE 440
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ G P + TY +DGL +
Sbjct: 441 LFQEMVSRGVPPSVVTYGILLDGLCD 466
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 157/331 (47%), Gaps = 7/331 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
+ + R +DG + +R++I GR P+V ++ LI+ FVK + +A Y
Sbjct: 282 YSSIIGGLCNDGRWDDGA---KMLREMI-GRNIIPNVVTFSALIDVFVKEGKLLEAKELY 337
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ MV + PD +T++ LI GFC+ + A + M KGC PN+V+++ LI +
Sbjct: 338 NEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ D G+ + E+ G +VT LV G C G++ A EL + RGV P Y
Sbjct: 398 KRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G ALE+ +++ K + + +I G+ K +A L +
Sbjct: 458 GILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV 517
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD +T+N ++ LC G +AD L G P TY+IL+ + +
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVIS 577
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ EM GF D +T + LS+ R
Sbjct: 578 SVELIEEMKMRGFAADASTIKMVVVMLSDGR 608
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 188/426 (44%), Gaps = 10/426 (2%)
Query: 61 LLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLA 120
LL P S+ +H + L H + FH F WA +I + H + ++ L
Sbjct: 30 LLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPHYTHSLHSSWSMIHMLT 89
Query: 121 SSYRFSELHSVLN------FISANPCPCSNDGIFSCPEM-ERIFHFAVNAFVKANRMNDG 173
F VL+ +S+ S I PE+ + + V + K+ +D
Sbjct: 90 KHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDA 149
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ FE M L + +P + VL+N +K Y RMV+D V P++ +N LI
Sbjct: 150 VQVFEQM-SLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIH 208
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+++ + A + EM KG P++ ++NTLI + + E +++ +M G
Sbjct: 209 ACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINL 268
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V+ L+ G C EG++ +A + + + +P Y L++ C AL +
Sbjct: 269 DIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEALRLR 326
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + KG P V+ +++ L + +A+ L+ +M + + DSVT N L+ C +
Sbjct: 327 EMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKI 386
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A + + GL P+ TY L+ G+ + + + + L+ MLD GF P+ TY
Sbjct: 387 GDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTY 446
Query: 474 NSYMDG 479
+ +D
Sbjct: 447 SWIVDS 452
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 3/297 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI GF K + +A+ + ++D + P+ VT+ LI G+C+ +F+ AL L M
Sbjct: 273 YNSLIYGFCKEGKMREAMRMFGE-IKDAI-PNHVTYTTLIDGYCKANEFEEALRLREMMV 330
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P VV++N+++R + + + + +EM E + SVTC L++ C G +
Sbjct: 331 AKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLN 390
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A + G+ P F Y L+ C A E++ + G P+ + ++
Sbjct: 391 SALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ + L ++ L +G + + L+ LC + R A++L KG+
Sbjct: 451 DSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGIS 510
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
D + Y L Y + +++ EM + + Y + L ++ V Q
Sbjct: 511 GDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCF-SALDASQNKVSQ 566
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 10/276 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F K +M + + F ++ D P+ Y LI+G+ K EF++AL + MV
Sbjct: 277 IYGFCKEGKMREAMRMFGEIK---DAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKG 333
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P VVT+N ++ C + + A L EM E+ + V+ NTLI + + +
Sbjct: 334 LYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSAL 393
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+M+E G +S T + L+ G C + A EL+ G P Y +V+
Sbjct: 394 KFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSY 453
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + N L + DE KG ++ LI L ++ + A L+ M +GI DS
Sbjct: 454 CKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDS 513
Query: 401 VTFNCLLEDLCDVGRTVDAD-------RLRLLASTK 429
V + L G T A R RL+ + K
Sbjct: 514 VIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVK 549
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA--SGLMEKMLKEGILPDSVTFNCL 406
A++V +++ P + ACT L+ L L+ G+ + + ++M+++G++P+ +NCL
Sbjct: 149 AVQVFEQMSLCNLKPHLHACTVLMNSL--LKDGITSMVWKVYKRMVQDGVVPNIYVYNCL 206
Query: 407 LEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+ C R V+ A+ + KG+ PD TY+ L++ Y ++ E ++ ++M EG
Sbjct: 207 IHA-CSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREG 265
Query: 466 FIPDLATYNSYMDGLSNARK 485
D+ +YNS + G K
Sbjct: 266 INLDIVSYNSLIYGFCKEGK 285
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 11/218 (5%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ I+R L S R + + +L+ +S + +C + +NA+ K
Sbjct: 339 VTYNSILRKLCSDGRIRDANKLLHEMSERKVQADS---VTCNTL-------INAYCKIGD 388
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+N L F+ P+ Y LI+GF K E + A M+ P+ T++
Sbjct: 389 LNSAL-KFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYS 447
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
++ +C+ D L L E KG N+ + LIR + + + Y M
Sbjct: 448 WIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGK 507
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G SV L G A +++ + +RR ++
Sbjct: 508 GISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLM 545
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 2/303 (0%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E ++K I+ P V IY +IN K +A +D M R+ P+ T+ LI+G C+
Sbjct: 283 EMLKKGIE--PDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ A + +M+ KG + N V FNTL+ G+ + DE + + M + G E + T
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFT 400
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
C I+ G C R +A L++ RGV P + L++ C E N A + +
Sbjct: 401 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 460
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
KKG PSV+ IE + K EA L+ +M + G++PD+ T+ L++ G
Sbjct: 461 KKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVD 520
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L GL+ + +TY +++SG +++ R E L +EM EG +PD Y+S +
Sbjct: 521 RALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580
Query: 478 DGL 480
L
Sbjct: 581 ASL 583
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 121/223 (54%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
I+N L++G+ K D+AL + M + + D T NI+ SGFCR+ + + A L M
Sbjct: 365 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 424
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E+G PNVVSF+ LI + E+ F E + M + G S VT ++ C +G++
Sbjct: 425 EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKM 484
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A +L+ + RG++P + Y L++ GN ALE+ +E+ + G +V+ T +
Sbjct: 485 EEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVI 544
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
I GL + + EA L ++M KEGI+PD ++ L+ L VG
Sbjct: 545 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 150/344 (43%), Gaps = 41/344 (11%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L E +R+++D + + + +++G K E +A D +V KP V+T+N L+
Sbjct: 171 LCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLL 230
Query: 233 SG-----------------------------------FCRNKKFDLALGLFREMREKGCN 257
+G + R+ K + A LF EM +KG
Sbjct: 231 NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE 290
Query: 258 PNVVSFNTLIRG--FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+V + ++I FG K + EM E ++ T L++G C G + A
Sbjct: 291 PDVYIYTSIINWNCKFGNMK--RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 348
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+V D +GV + L++ C +G AL + + + +KG C + G
Sbjct: 349 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGF 408
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R + EA L+ M + G+ P+ V+F+ L++ C +A RL + KG P
Sbjct: 409 CRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSV 468
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY+ + Y ++ + +E L+NEM + G +PD TY S +DG
Sbjct: 469 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++L + N+ FD +L +F R+KG + S + + V +M++
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 181
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G E + +VDGLC +G V++A L+ + +G P Y L+ + G
Sbjct: 182 SGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGG 241
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
E++ + K +V T LIE R K EA L ++MLK+GI PD + ++
Sbjct: 242 VNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIIN 301
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G A L + + L P+ TY L++G + K E +VN+M +G
Sbjct: 302 WNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDV 361
Query: 469 DLATYNSYMDG 479
+ +N+ MDG
Sbjct: 362 NRVIFNTLMDG 372
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +++LI+ + K + F +A + M + P VVT+N I +C+ K + A L
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 490
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E+G P+ ++ +LI G D + + EM +LG + VT +++ GL
Sbjct: 491 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 550
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE-VVDEL 356
+GR +A +L + ++ G++P D Y L+ L G LE VVD +
Sbjct: 551 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 600
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 173/423 (40%), Gaps = 88/423 (20%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN--------DGIFSCPEMER 155
S + D L + L + +F+E+ +VL FI + SN G F+ P +
Sbjct: 59 SRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVE 118
Query: 156 IFHFAVNAFVKANRMNDGLL-AFEAMRKL---IDGRPSVSIYNVLINGFVKCREFDKALG 211
F + NRM D L F+ RK ID R S + L+ + + +
Sbjct: 119 KFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDER---SCFEFLL-ALKRSGNMELCVE 174
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F +MV ++ V ++ ++ G C+ + A L E+ KG P+V+++NTL+ G+
Sbjct: 175 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 234
Query: 272 GERKFDEGVNMAYEMIELGC-EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E K GVN ++E +++ T +L++ ++ +A
Sbjct: 235 -EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA---------------- 277
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE------GLRR------- 377
EKL DE+ KKG P V T++I ++R
Sbjct: 278 -------EKL------------FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318
Query: 378 ---------------LRKGVEASGLMEK-------MLKEGILPDSVTFNCLLEDLCDVGR 415
L G +G M+ M +G+ + V FN L++ C G
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+A RL+ + KG + D T +I+ SG+ R NRR+E + L+ M + G P++ +++
Sbjct: 379 IDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSI 438
Query: 476 YMD 478
+D
Sbjct: 439 LID 441
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
+ L R + R FD + + + G E +C + L G + EL ++F R
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNM----ELCVEFLR 177
Query: 324 R----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ G+ + + +V+ LC +G A ++DEL KG PSVI TL+ G ++
Sbjct: 178 QMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIK 237
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ ++ M K + + T+ L+E + +A++L KG++PD Y
Sbjct: 238 DVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYT 297
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++ + K L +EM + +P+ TY + ++G A
Sbjct: 298 SIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 148/292 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R D L
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G P+V +++ LI G E K D + EM+ G + VT L+DG C
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV A E+ + +LP Y L+ LC +G+ A +++DE+ KG P
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL PD TY ++V+ + ++ +G L+ EM +G P + TYN M+G
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 173/372 (46%), Gaps = 9/372 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCP------EMERIFHFA--VN 162
++ ++ L + SE S++ + + S +F+ + I+ F+ +
Sbjct: 2 SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + R+ P + VL +K + F GFY+ ++
Sbjct: 62 AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL-EHLMKLKYFKLVWGFYEEILECGYP 120
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+ DEG +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ G + T +L++GLC E ++ A L + +G++P + L++ C
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G +A+E+ ++ + LP +I TLI GL + +A L+++M +G+ PD T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L++ C G A R + + D + Y L+SG +E R + E ++ EML
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 463 DEGFIPDLATYN 474
G PD TY
Sbjct: 361 SVGLKPDTGTYT 372
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 38/254 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N +++ +++G AM L G +P V Y+VLING K + D A G +D
Sbjct: 161 YNTLMNGYIRLGDLDEGFRLKSAM--LASGVQPDVYTYSVLINGLCKESKMDGANGLFDE 218
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + P+ VTF LI G C+N + DLA+ ++++M + P+++++NTLI G +
Sbjct: 219 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 278
Query: 276 FDEG-------------------------------VNMAYE----MIELGCEFSSVTCEI 300
+ ++ A+E MI+ V
Sbjct: 279 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 338
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+ GLC EGR + A +++ + G+ P Y +V + C +G+ +++ E+ + G
Sbjct: 339 LISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDG 398
Query: 361 NLPSVIACTTLIEG 374
+ PSV+ L+ G
Sbjct: 399 HAPSVVTYNVLMNG 412
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 129 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 188
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + A+ L KGL P+G+T+ L+ G+ + R
Sbjct: 189 VQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 248
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 249 EIYKQMLSQSLLPDLITYNTLIYGL 273
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 50 RSDIYVFSGLITAYLESGFLRDAIECYRLTRE---HKLWVPFDTCRKVLEHLMKLKYFKL 106
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 107 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 166
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K A+GL ++ML +G++P
Sbjct: 167 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVP 226
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L+
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 286
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM +G PD TY + +DG
Sbjct: 287 DEMSMKGLKPDKFTYTTLIDG 307
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 90 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 149
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 150 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 208
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 156/303 (51%), Gaps = 6/303 (1%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ +N L+ G K + + Y +M + PD++T NILI+ C + + L
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+ +G P+VV+F TLI+G E + E + M +LGC + VT L+ GLC
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 309 GRV---LKACELVIDFSRRGVL---PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G + LK + +++ + V P Y +++ LC GN A+ + +E+ +G
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V+ + LI+ L + + ++A L+E M++ GI+P+ T+ L++ C VG A L
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ +KG +PD ++Y++L++GY + + +E L NEML G PD+ T + L
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389
Query: 483 ARK 485
A K
Sbjct: 390 AGK 392
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 9/332 (2%)
Query: 161 VNAFVKANRMNDGLLAFEA-MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N NR+N+GL A MR+ P V + LI G +A + RM +
Sbjct: 133 INCLCNVNRINEGLAAMAGIMRR--GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL 190
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREK------GCNPNVVSFNTLIRGFFGE 273
P+VVT+ LI G C ++AL +EM C PNV+S++ +I G
Sbjct: 191 GCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKV 250
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++E + + EM++ G + + VT +L+D LC EG+V+KA +L+ + G++P F Y
Sbjct: 251 GNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTY 310
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C G+ A E+ + KG P VI+ LI G + K EA L +ML
Sbjct: 311 TSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH 370
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD T LL+ L G+ DA L + + D I + G + E
Sbjct: 371 VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFE 430
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L NE+ D+ T+ +DGL A K
Sbjct: 431 AMKLFNELESYNMKLDIETFGCLIDGLCKAGK 462
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A F+D M+R + +FN L++G + + + L+++M G P++++ N LI
Sbjct: 79 QAHQFFDLMMRS-----IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILI 133
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ +EG+ ++ G VT L+ GLC E R+++A +L + + G
Sbjct: 134 NCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCT 193
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN------LPSVIACTTLIEGLRRLRKG 381
P Y L++ LC GN IAL+ E+ + P+VI+ + +I+GL ++
Sbjct: 194 PNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNW 253
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L +M+ +G+ P+ VTF+ L++ LC G+ + A +L + G+ P+ TY L
Sbjct: 254 EEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSL 313
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ + L M +G+ PD+ +YN ++G K
Sbjct: 314 IKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 7/330 (2%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCR 204
+F+C + ++ K + + F M +D +P+V ++VLI+ K
Sbjct: 230 VFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEM---VDQGVQPNVVTFSVLIDMLCKEG 286
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ KA + M++ + P++ T+ LI GFC + A LF M KG P+V+S+N
Sbjct: 287 QVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYN 346
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI G+ K +E + + EM+ +G T +L+ L G+V A EL +
Sbjct: 347 MLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKEL-FRVIKP 405
Query: 325 GVLPKDFDYFGL-VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+PKD + ++ LC G A+++ +EL + LI+GL + K
Sbjct: 406 YAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLET 465
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L EK+ +EGI PD++ ++ ++ C G+ A+ L G PD +TY IL+
Sbjct: 466 AWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMR 525
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ N+ ++ L++ M+++ PD Y
Sbjct: 526 GFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 42/370 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + +R+ + F M+KL P+V Y LI G + AL ++ M
Sbjct: 164 FTTLIKGLCVEHRIIEATKLFMRMQKL-GCTPNVVTYGTLIKGLCALGNINIALKWHQEM 222
Query: 217 VRD------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ D +P+V++++I+I G C+ ++ A+ LF EM ++G PNVV+F+ LI
Sbjct: 223 LNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDML 282
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E + + + MI++G + T L+ G C G + A EL + +G P
Sbjct: 283 CKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDV 342
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV------------------------- 365
Y L+ C A+++ +E+ G P V
Sbjct: 343 ISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRV 402
Query: 366 ----------IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
C ++GL + EA L ++ + D TF CL++ LC G+
Sbjct: 403 IKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGK 462
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L +G+ PD M Y ++ G+ ++ + + L +M + G PDL TY+
Sbjct: 463 LETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSI 522
Query: 476 YMDGLSNARK 485
M G + K
Sbjct: 523 LMRGFYESNK 532
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ Y LI GF + + A + M +PDV+++N+LI+G+C+ K + A+ L
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM G P+V + L++ F K D+ + + C I +DGLC
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + +A +L + + D + FG L++ LC G A E+ ++L+++G P +
Sbjct: 425 NGYIFEAMKLFNELESYN-MKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAM 483
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
A +++I G + + +A+ L +KM + G PD +T++ L+ + + +L
Sbjct: 484 AYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
K + PD Y I+ ++ + KE +L+
Sbjct: 544 IEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+FN LL L + L GL PD +T +IL++ NR EG + +
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ G+IPD+ T+ + + GL + + T+
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATK 182
>gi|222619024|gb|EEE55156.1| hypothetical protein OsJ_02962 [Oryza sativa Japonica Group]
Length = 428
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYD--RMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P+ + YNVL VK D A+ D R+ R+ KPD ++N +I G CR + A
Sbjct: 8 PTTATYNVL----VKAHCSDAAVPIDDAVRVFRNIPKPDACSYNTVIDGLCRRGRLPEAR 63
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF EM G P VV++ TLI E FD+ + + EM G + VT L+DGL
Sbjct: 64 DLFAEMIANGTAPTVVTYTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGL 123
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR A EL+ + LP Y +++ LC EG G A+E++D + +G P
Sbjct: 124 CKGGRAASAVELLDRMVKERKLPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDA 183
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVD 418
LI GL + +EAS +++M GI P+ +T+ + ++ LC G V
Sbjct: 184 GLFGKLIVGLCDAGRALEASNYLDEMNFAGIRPNRLTWSLHGRINDAVVTALCSKGEVVR 243
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ T+G+ T+H+LV +++N ++ ++V +ML E IP+ T+++ +
Sbjct: 244 AFQVYQSMRTRGISTKPTTFHLLVECLSKKNNLEKAAHVVRDMLSERCIPERETWDTIVR 303
Query: 479 GLSNARK 485
+ +K
Sbjct: 304 AYWSKKK 310
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 47/245 (19%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERK--FDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCN 307
MR G P ++N L++ + D+ V + + + C +++V +DGLC
Sbjct: 1 MRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPKPDACSYNTV-----IDGLC- 54
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RRG LP+ D F E+ G P+V+
Sbjct: 55 ---------------RRGRLPEARDLFA-------------------EMIANGTAPTVVT 80
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
TTLI L R +A L ++M + GI+P+ VT++ L++ LC GR A L R++
Sbjct: 81 YTTLIHWLAREACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMV 140
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K P+ +TY ++ G +E + +++ M +G PD + + GL +A +
Sbjct: 141 KERK--LPNTITYSSVIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGR 198
Query: 486 SVRQT 490
++ +
Sbjct: 199 ALEAS 203
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 178/367 (48%), Gaps = 16/367 (4%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
FI R+L S+ + VL +S N D PE+ R +N ++ R ND
Sbjct: 62 FISRNLKPSH----VDKVLMMLSLNDSRLMKDCNLM-PEV-RTLSALLNGLLRFRRFNDV 115
Query: 174 LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
LL F+ + + +P + IY+ ++ + ++F+KA M ++ K +V +N+LI
Sbjct: 116 LLLFDDIVS-ANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIH 174
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C++++ AL + + +KG NVV+ ++G KF+E + EM E G
Sbjct: 175 GLCKSRRIWEALEIKNCLMQKGLEANVVT-------YYG--KFNEAELLFKEMGEKGLCA 225
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ +T IL+D C G + A + ++ + + Y L+ C GNA A
Sbjct: 226 NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYF 285
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
DE+ KG P+V+ T+LI G + +A + +M +GI P++ TF ++ LC
Sbjct: 286 DEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRA 345
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+A RL + + P +TY++++ G+ R E +L++EM+ +GF+PD TY
Sbjct: 346 NMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTY 405
Query: 474 NSYMDGL 480
+ GL
Sbjct: 406 RPLISGL 412
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 178/386 (46%), Gaps = 19/386 (4%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIFH--- 158
+VRSL F++ +++++ N C C + I+ E++
Sbjct: 137 VVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKG 196
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMV 217
N + N+ L F+ M + G + I Y++LI+ F + E D A+GF D+M
Sbjct: 197 LEANVVTYYGKFNEAELLFKEMGE--KGLCANHITYSILIDSFCRRGEMDNAIGFLDKMT 254
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ ++ V +N LI+G+C+ A F EM +KG P VV++ +LI G+ E ++
Sbjct: 255 KASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWH 314
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + EM G ++ T ++ GLC + +A L + R ++P + Y ++
Sbjct: 315 KAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMI 374
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
E C GN A ++DE+ KG +P LI GL + + EA ++ + K+
Sbjct: 375 EGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHK 434
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
+++ ++ L+ C GR DA + +G+ D + Y IL+ G RE+ + L
Sbjct: 435 LNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGL 494
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNA 483
+ EM + G PD Y + +D S A
Sbjct: 495 LKEMHNHGLRPDAVIYTNMIDRHSKA 520
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 8/333 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + K + F+ M ID P+V Y LI+G+ E+ KA Y+ M
Sbjct: 269 INGYCKLGNASAAKYYFDEM---IDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+ TF +ISG CR A+ LF EM+E+ P+ V++N +I G E
Sbjct: 326 KGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISE 385
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM+ G + T L+ GLC+ GRV +A E V D + + Y LV
Sbjct: 386 AFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVH 445
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EG A+ + ++G ++ LI+G R GL+++M G+ P
Sbjct: 446 GYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRP 505
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D+V + +++ G +A L + +G P+ +TY L++G + + E L
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565
Query: 459 NEMLDEGFIPDLATYNSYMDGLS---NARKSVR 488
E L P+ TY ++D L+ N K+V+
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 151/359 (42%), Gaps = 39/359 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ +AN M + + F M RK++ PS YNV+I G + +A D
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIM---PSEVTYNVMIEGHCRSGNISEAFHLLD 391
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV PD T+ LISG C + A ++ + N + ++ L+ G+ E
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+F + V+ M+E G V IL+DG E L+ + G+ P Y
Sbjct: 452 RFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYT 511
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---------LRKGVEAS 385
++++ GN A + D + +G LP+V+ T LI GL + L K S
Sbjct: 512 NMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVS 571
Query: 386 -------------------GLMEKMLK------EGILPDSVTFNCLLEDLCDVGRTVDAD 420
G MEK ++ +G L +V++N L+ C +G+ +A
Sbjct: 572 DVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEAT 631
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+L + + PD +TY ++ + + +E L + MLD+G PD Y+ + G
Sbjct: 632 KLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHG 690
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 137/323 (42%), Gaps = 36/323 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + +I+G + +A+ + M ++ P VT+N++I G CR+ A L
Sbjct: 330 PNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHL 389
Query: 248 FREMREKGCNP-----------------------------------NVVSFNTLIRGFFG 272
EM KG P N + ++ L+ G+
Sbjct: 390 LDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCK 449
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E +F + V+ M+E G V IL+DG E L+ + G+ P
Sbjct: 450 EGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVI 509
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++++ GN A + D + +G LP+V+ T LI GL + +A L ++ L
Sbjct: 510 YTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETL 569
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ P+ +T+ C L+ L G A +L A KG ++Y+IL+ G+ R + +
Sbjct: 570 VSDVTPNHITYGCFLDHLTRGGNMEKAVQLH-HAMLKGFLATTVSYNILIRGFCRLGKIE 628
Query: 453 EGENLVNEMLDEGFIPDLATYNS 475
E L++ M D +PD TY++
Sbjct: 629 EATKLLHGMTDNDILPDYITYST 651
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 1/274 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+ L++G+ K F A+ MV V D+V + ILI G R GL +EM
Sbjct: 440 YSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G P+ V + +I E + M++ GC + VT L++GLC G +
Sbjct: 500 NHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMD 559
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L + V P Y ++ L GN A+++ + K G L + ++ LI
Sbjct: 560 KAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILI 618
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G RL K EA+ L+ M ILPD +T++ ++ + C +A +L KGL
Sbjct: 619 RGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLK 678
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
PD + Y LV G ++ L +EM+ G
Sbjct: 679 PDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGM 712
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 215 RMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
R+++D + P+V T + L++G R ++F+ L LF ++ P++ ++ ++R
Sbjct: 85 RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ F++ M + M C+ S V +L+ GLC R+ +A E+ ++G+ Y
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+G + A + E+ +KG + I + LI+ R + A G ++KM K
Sbjct: 205 YGKFNE---------AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTK 255
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
I +N L+ C +G A KGL P +TY L+SGY E +
Sbjct: 256 ASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHK 315
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ NEM +G P+ T+ + + GL A R
Sbjct: 316 AFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIR 353
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP IY +I+ K +A G +D MV + P+VVT+ LI+G C+ D A
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAEL 563
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +E PN +++ + ++ V + + M++ G ++V+ IL+ G C
Sbjct: 564 LSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFC 622
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ +A +L+ + +LP Y ++ + C N A+++ + KG P +
Sbjct: 623 RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTL 682
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A + L+ G + +A L ++M++ G+ + VT
Sbjct: 683 AYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 161 VNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N KA M+ LL+ E + + D P+ Y ++ + +KA+ + M++
Sbjct: 549 INGLCKAGLMDKAELLSKETL--VSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKG 606
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ V++NILI GFCR K + A L M + P+ ++++T+I E
Sbjct: 607 FL-ATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEA 665
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ + + M++ G + ++ LV G C G + KA EL + RRG+
Sbjct: 666 IKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGM 712
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 167/319 (52%), Gaps = 5/319 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N ++K ++N+ MR + + PS + YN+L++G++K + + L Y
Sbjct: 634 YNSMMNGYLKGGQINE---IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 690
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV++ +KPD VT+ +LI G C ++A+ +M +G P+ ++F+ LI+ F +
Sbjct: 691 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 750
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + + M L SS T +V+GL + + ++ E++ D G+ PK Y
Sbjct: 751 KMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYI 810
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G+ A E+ +++ G +PS +A ++++ GL + K EA + +++
Sbjct: 811 ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA 870
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++P TF L+ LC + DA L+ L + GL D +TY++L++G + +
Sbjct: 871 GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 930
Query: 455 ENLVNEMLDEGFIPDLATY 473
+L EM +G +P++ TY
Sbjct: 931 LDLYEEMKSKGLLPNITTY 949
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 152/344 (44%), Gaps = 26/344 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R L + MR+ ++ P YN LI+GF + + A+ +++M
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMRE-VNLTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR--------------------EKGC 256
+R +KP V T+ LI G+CRN + D A + EM+ G
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGI 420
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
+P+V++++ LI E E M + F + ++D C G VL+A
Sbjct: 421 DPDVITYSALI----NEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFS 476
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+ + R G P Y L+ LC G+ A E + L +K TL+ G+
Sbjct: 477 VYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGIC 536
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ EA L EKM+ ILPD+ T+ LL+ C G+ V A L + KGL PD +
Sbjct: 537 KHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTI 596
Query: 437 TYHILVSGYTRENRRKEGENLVNEML-DEGFIPDLATYNSYMDG 479
Y L++G E + K + E++ EG D YNS M+G
Sbjct: 597 AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNG 640
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 148/346 (42%), Gaps = 51/346 (14%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN ++N +VK AL D M ++ ++ D+ T+NI+I C+ K+ A L
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLL 321
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ MRE P+ S+NTLI GFFGE K + + + +M+ + S T L+DG C
Sbjct: 322 LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381
Query: 308 EGRVLKACELVIDFSRRGVLPKD------------------------------------- 330
GR +A ++ + GV P++
Sbjct: 382 NGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQ 441
Query: 331 -----------FD---YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
FD + +++ C GN A V D + + G P + +L+ GL
Sbjct: 442 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLC 501
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ V+A M +L++ D T N LL +C G +A L T+ + PD
Sbjct: 502 QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 561
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
TY IL+ G+ + + L+ ML++G +PD Y ++GL N
Sbjct: 562 TYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVN 607
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 144/327 (44%), Gaps = 6/327 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ F K ++ L+ + M + L+ P Y L+NG V + A +
Sbjct: 563 YTILLDGFCKRGKVVPALILLQMMLEKGLV---PDTIAYTCLLNGLVNEGQVKAASYMFQ 619
Query: 215 RMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++ ++ + D + +N +++G+ + + + L R M E P+ S+N L+ G+ +
Sbjct: 620 EIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKK 679
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + +M++ G + +VT +L+ GLC G + A + + GV P + +
Sbjct: 680 GQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAF 739
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ + AL++ + PS ++ GL R ++ ++ M++
Sbjct: 740 DILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVE 799
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ P + L+ C VG A L+ G+ P + +V G + + +E
Sbjct: 800 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 859
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + ++ G +P +AT+ + M GL
Sbjct: 860 AIIVFSSIMRAGMVPTIATFTTLMHGL 886
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 336 LVEKLCGEG---NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
LV EG +A A+ +DE G S+ +C ++ L + K +++ L
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDEC---GFKASLFSCNNILNALVGINKSEYVWLFLKESL 222
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD-PDGMTYHILVSGYTRENRR 451
D T N +L LC G+ A+ + L K P+ +TY+ +++ Y ++ R
Sbjct: 223 DRKFPLDVTTCNIVLNSLCTQGKLSKAESM--LQKMKNCRLPNAVTYNTILNWYVKKGRC 280
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
K ++++M G DL TYN +D L ++S R
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSAR 317
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 4/328 (1%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
++ +A ++ + + M+K DG P + I NV +N V DKAL F +RM R V
Sbjct: 172 SYSRAGKLRSAMRVLQLMQK--DGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGV 229
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PDVVT+N LI G C ++ AL + M + GC P+ +S+ T++ E++ E N
Sbjct: 230 DPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWN 289
Query: 282 MAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M + G +T +L+ GL G +A + + + Y +V
Sbjct: 290 LLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSF 349
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A E++ E+ KG P V+ + +++G R+ + +A +M+ M K G P++
Sbjct: 350 CLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNT 409
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT LL LC VG++ +A L + + P G+TY +++ G+ RE + E ++V +
Sbjct: 410 VTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQ 469
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKSVR 488
ML +GF P N + L +K R
Sbjct: 470 MLQKGFFPTAVEINLLIHALCKEQKPAR 497
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 167/371 (45%), Gaps = 12/371 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV-K 166
D T+ +++ L + R E ++ + N CP P+ +I +F V +F+ K
Sbjct: 232 DVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCP---------PD--KISYFTVMSFLCK 280
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+ + E MR P YN+LI+G K D+AL F R + D V
Sbjct: 281 EKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQV 340
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
++ ++ FC N + A + EM KGC P+VV+++ ++ GF + D+ M M
Sbjct: 341 GYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM 400
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ GC+ ++VT L++GLC G+ +A EL+ P Y ++ EG
Sbjct: 401 YKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKL 460
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ +VV ++ +KG P+ + LI L + +K A ME+ +G + V F +
Sbjct: 461 VESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTV 520
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ G A L PD +TY ++V R+ + KE LV +ML+ G
Sbjct: 521 IHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGL 580
Query: 467 IPDLATYNSYM 477
+P TY + +
Sbjct: 581 LPTPVTYRTVI 591
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ LI GF + A + M + PDV T+ ILI C+ K A L
Sbjct: 305 PDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNL 364
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G PNVV+++TL+ G+ + + + M++ S + I+++GLC
Sbjct: 365 LGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCK 424
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V +A L+ + + V+P Y L++ LC G AL+++ EL +G VI
Sbjct: 425 GKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT 484
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L++GL + + +A L KM + GI P+ T+ L++ LC R +A +L
Sbjct: 485 YTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHIL 544
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
KG D TY++++ G +E E + ++M D G IPD T+
Sbjct: 545 VKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 140/280 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +LI+ K + +A M ++ VKP+VVT++ L+ G+C + A +
Sbjct: 340 PDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQI 399
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M + NP+V S+N +I G + DE +N+ EM+ ++VT L+DGLC
Sbjct: 400 FHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCK 459
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A +L+ + RG Y L++ LC N A+ + ++ ++G P+
Sbjct: 460 SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYT 519
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+GL + + A L + +L +G D T+N ++ LC G +A ++
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G PD +T+ I++ ++ + E L++EM+ +G +
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 49/368 (13%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P + + H AV+ F +G+L L+ PS+ + ++ VK + F A+
Sbjct: 107 PSIHDVVHDAVSQF-------NGML-------LMRNTPSIIEFGKILGSLVKMKHFPTAI 152
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+M ++PD+VT +ILI+ FC + + + ++ + G PN + TL++G
Sbjct: 153 SLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGL 212
Query: 271 F--GERK-----FDEGVNMAYEMIELG--------CEFSSVTCEI--------------- 300
GE K D+ V ++M ++ C+ C I
Sbjct: 213 CLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDV 272
Query: 301 -----LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
++DGLC + V +A + + + RG+ P Y L+ C G A +++E
Sbjct: 273 VMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE 332
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ K P V T LI+ L + K EA L+ M KEG+ P+ VT++ L++ C VG
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+A ++ ++P +Y+I+++G + E NL+ EML + +P+ TYNS
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452
Query: 476 YMDGLSNA 483
+DGL +
Sbjct: 453 LIDGLCKS 460
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A+ F M P+++ F ++ + F ++++ +M G E VT IL++
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
C+ G++ + ++ + G P L++ LC +G +L D++ +G
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ ++ TL+ GL ++ + A L+ + PD V +N +++ LC +A
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+++G+ PD +TY L+ G+ + +L+NEM + PD+ TY +D L
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355
Query: 484 RK 485
K
Sbjct: 356 GK 357
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 160/324 (49%), Gaps = 6/324 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++A K +R++ EA L + P + YN +++ + D MV
Sbjct: 204 ISALCKLDRLD------EARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRG 257
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++PD V + ++ FC+ ++ +A + M +GC PNV +F L++GFF + K + +
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDAL 317
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M M+ G S+++ +L+ GLC+ G + +A + + LP Y L++
Sbjct: 318 GMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGF 377
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G+ +A+ + +++ G P+V+ T +++ L + +A L++KM E P++
Sbjct: 378 SKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNT 437
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+TFN L+ LCD+GR A + G P+ TY+ L+ G RE ++ ++ E
Sbjct: 438 LTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTE 497
Query: 461 MLDEGFIPDLATYNSYMDGLSNAR 484
ML+ GF L +YN+ + GL R
Sbjct: 498 MLNHGFELSLVSYNTTISGLCQMR 521
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 3/327 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFY 213
+ F V F +++D L + M + +G PS YNVLI G + +AL +
Sbjct: 298 QTFTVLVKGFFDDGKVHDALGMWNWM--VAEGWAPSTISYNVLIRGLCHIGDLKRALFVF 355
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M + PDV T++ LI GF + D+A+ ++ +M GC PNVV + ++ +
Sbjct: 356 SCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKK 415
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
FD+ N+ +M C +++T L+ LC+ GR +A + R G P D Y
Sbjct: 416 VMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTY 475
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ L EGN AL ++ E+ G S+++ T I GL ++R EA L+ +M+
Sbjct: 476 NELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMII 535
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI PD+ TFN ++ C G A + + + Y L+SG +++ +
Sbjct: 536 QGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDD 595
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML EG P+ AT+N + G+
Sbjct: 596 AMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 14/336 (4%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
+CPE + A+ AF +A + L F A L P+V +YN L++ ++
Sbjct: 87 ACPEGALVA--AICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVA 144
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ YD M + V+P+V T+N+LI C+N + A + EM KGC P+ VS T+I
Sbjct: 145 AVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTII 204
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ DE + EM +G +++V V LC + R+ + +V + RG+
Sbjct: 205 SALCKLDRLDEARGILAEMTPVGASYNAV-----VHALCGQFRMREVFLVVDEMVHRGLR 259
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y +V C +A ++ + +G +P+V T L++G K +A G+
Sbjct: 260 PDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGM 319
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD---PDGMTYHILVSG 444
M+ EG P ++++N L+ LC +G D R + S G PD TY L+ G
Sbjct: 320 WNWMVAEGWAPSTISYNVLIRGLCHIG---DLKRALFVFSCMGKSDCLPDVRTYSTLIDG 376
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ ++ N+M + G P++ Y + +D L
Sbjct: 377 FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVL 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L E + V D + K G P+V LI+ L + + A ++++M
Sbjct: 130 YNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMA 189
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G PD V+ ++ LC + R +A + LA + P G +Y+ +V + R +
Sbjct: 190 RKGCRPDEVSHTTIISALCKLDRLDEARGI--LAE---MTPVGASYNAVVHALCGQFRMR 244
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +V+EM+ G PD Y S + AR+
Sbjct: 245 EVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARE 277
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSND--------GIF---SCPEMERIFHF 159
TF ++RSL R +V + + CP ND G+F +C + R+
Sbjct: 439 TFNTLIRSLCDLGRAGRALNVFHGMRRYGCP-PNDRTYNELLHGLFREGNCEDALRMLTE 497
Query: 160 AVN-----AFVKANRMNDGLLAF----EAM----RKLIDG-RPSVSIYNVLINGFVKCRE 205
+N + V N GL EAM R +I G +P +N +I+ + K
Sbjct: 498 MLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGN 557
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A RM ++V + L+SG C K D A+ +M +G PN ++N
Sbjct: 558 VRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNV 617
Query: 266 LIRGFF 271
L+RG F
Sbjct: 618 LVRGIF 623
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R D
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEG 177
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM+ G + VT L+DG
Sbjct: 178 FXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 237
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + + P Y L+ LC +G+ A ++DE+ KG P
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPD 297
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI G + A ++M++E I D V + L+ C GR+VDA+++
Sbjct: 298 KITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLR 357
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL PD TY ++++ + + G L+ EM +G +P + TYN M+G
Sbjct: 358 EMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 140/332 (42%), Gaps = 36/332 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F + A++++ + D + + R+ P + VL +K + F GFY+
Sbjct: 55 VFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYEE 113
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGD 173
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M+ GV P + Y
Sbjct: 174 LDEGFXLKSXMLA-----------------------------------SGVQPDVYTYSV 198
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC E A E+ DE+ KG +P+ + TTLI+G + + A + ++ML +
Sbjct: 199 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+N L+ LC G A L S KGL PD +TY L++G +E
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAF 318
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
M+ E D Y + + G +SV
Sbjct: 319 EHRKRMIQENIRLDEVAYTALISGXCQEGRSV 350
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D A+ Y +
Sbjct: 196 YSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 253
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 254 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGD 313
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ G C EGR + A +++ + G+ P Y
Sbjct: 314 LDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTM 373
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C G+ +++ E+ + G++PSV+ L+ G
Sbjct: 374 IINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 164/382 (42%), Gaps = 78/382 (20%)
Query: 181 RKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
RKL DG P+ +IYN L++G+ K RE +A Y+ M V PD VTFNIL+ G
Sbjct: 337 RKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWG 396
Query: 235 -----------------------------------FCRNKKFDLALGLFREMREKGCNPN 259
C + D A+ L +E+ EKG +
Sbjct: 397 HYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLS 456
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
VV+FN+LI G + ++ AY M+ G SS TC L+ GLC +G + +A L+
Sbjct: 457 VVAFNSLI-GAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILL 515
Query: 319 I-----------------------------------DFSRRGVLPKDFDYFGLVEKLCGE 343
+ RG+ P + L++ L
Sbjct: 516 YRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKA 575
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
GN A EV E+ G +P+ A +LI GL + EA L ++M ++G+L D+ TF
Sbjct: 576 GNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTF 635
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N +++ C G+ A L GL PD T++IL+ GY + +VN+M
Sbjct: 636 NIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYS 695
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
G PD+ TYN+YM G RK
Sbjct: 696 CGLDPDITTYNTYMHGYCRMRK 717
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 156/327 (47%), Gaps = 5/327 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFY 213
++ V++ A R+++ A + +++L++ ++S+ +N LI + + DKA Y
Sbjct: 424 LYDVMVSSLCWAGRLDE---AMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAY 480
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MVR P T N L+ G CR A L M EKG N V++ L+ G+F
Sbjct: 481 RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKM 540
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + EM E G +V L+DGL G V +A E+ ++ S G +P +F Y
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC G AL++ E+ +KG L +I+G R + A M +
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+LPD TFN L+ C V A + + GLDPD TY+ + GY R + +
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
++++++ G +PD TYN+ + G+
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGI 747
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 151/340 (44%), Gaps = 2/340 (0%)
Query: 145 DGIFSCPEMERI-FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
D IF P + F+ + F + +R+ G M K + P V +N+LIN
Sbjct: 237 DMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFM-CSPDVVTFNILINACCIG 295
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
A+ + MVR V+P V TF ++ CR A LF +++ G PN +
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NTL+ G+F R+ + + EM G VT ILV G GR+ + L+ D
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G+ Y +V LC G A++++ EL +KG SV+A +LI R +
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDK 475
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A M++ G P S T N LL LC G +A L KG + + Y +L+
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD 535
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GY + N + + L EM + G PD + + +DGLS A
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKA 575
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 181 RKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L G P + Y VL++G+ K + A + M + PD V F LI G +
Sbjct: 517 RMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAG 576
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ A +F EM G PN ++N+LIRG + E + + EM + G + T
Sbjct: 577 NVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFN 636
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I++DG C G++ A E +D R G+LP F + L+ C + A E+V++++
Sbjct: 637 IIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSC 696
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC----DVGR 415
G P + T + G R+RK +A ++++++ GI+PD+VT+N +L +C D
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDILDRAM 756
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+ A L++ G P+ +T ++L+S + ++
Sbjct: 757 ILTAKLLKM-----GFIPNVITTNMLLSHFCKQ 784
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S+ N L+ GF+ +AL M V+P + + IL+ R + LF++
Sbjct: 178 SVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKD 237
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M KG P+ ++FN +I GF + + G ++ + M + C VT IL++ C GR
Sbjct: 238 MIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGR 297
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A + + R GV P + ++ LC EGN A ++ D + G P+ T
Sbjct: 298 TWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L++G + R+ +AS L E+M G+ PD VTFN L+ GR D+DRL G
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L D Y ++VS R E L+ E+L++G + +NS + S A
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRA 470
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 143/301 (47%), Gaps = 3/301 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFEA R ++ PS S N L+ G + +A RM+ + V + +L+
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD 535
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+ + + A L++EM+E+G P+ V+F LI G +E + EM +G
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVP 595
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
++ L+ GLC+ GRV +A +L + ++G+L F + +++ C G A+E
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETF 655
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ + G LP + LI G + V A ++ KM G+ PD T+N + C +
Sbjct: 656 LDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRM 715
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ A + + G+ PD +TY+ ++SG + + L ++L GFIP++ T
Sbjct: 716 RKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSDILDR-AMILTAKLLKMGFIPNVITT 774
Query: 474 N 474
N
Sbjct: 775 N 775
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+ G N G +A E++ GV P L+ L G+ G ++ ++ KG
Sbjct: 183 LLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKG 242
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT-VDA 419
PS + +I G R + V L+ M K PD VTFN L+ C GRT V
Sbjct: 243 PRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAI 302
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D L L+ + G++P T+ ++ RE E L + + D G P+ A YN+ MDG
Sbjct: 303 DWLHLMVRS-GVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG 361
Query: 480 LSNARKSVRQT 490
AR+ + +
Sbjct: 362 YFKAREVAQAS 372
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 35/330 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN ++ G + + + MVR P++VTFN LIS CRN F+
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283
Query: 247 LFREMREKGCNP-----------------------------------NVVSFNTLIRGFF 271
+ +M E GC P NVV +NTL++G
Sbjct: 284 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+++E + EM + C VT ILVD C G V + EL+ RG +P
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVI 403
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y ++ C EG A+ ++ + G P+ I+ T +++GL + V+A LM +M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+++G + +TFN L+ LC G A L G PD ++Y ++ G + +
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
E L+N M+++G P+ Y+S LS
Sbjct: 524 DEALELLNVMVNKGMSPNTIIYSSIASALS 553
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 178/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL + + C P++ R++ ++ K
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCT---------PDI-RMYATIIDGICKEGH 312
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN L+ G +++ M D VT
Sbjct: 313 LE---VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M E+GC P+V+++ T+I GF E DE V + M
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++++ I++ GLC+ R + A +L+ ++G + L+ LC +G
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +G+ P+++ ++ +
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + + M+ G +
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 610 PNESTYTILIRGLAS 624
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 136/275 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+L++ F + D+ + ++M+ PDV+T+ +I+GFC+ D A+ L + M
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
GC PN +S+ +++G ++ + ++ +MI+ GC + +T L++ LC +G V
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL+ G P Y +++ L G ALE+++ + KG P+ I +++
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L R + + + + + I D+V +N ++ LC G T A + G
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
P+ TY IL+ G E KE + ++ E+ +G +
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 11/369 (2%)
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+A R +L S +A P P P F V A R+ D L +
Sbjct: 97 VAGYCRAGQLESARRLAAAVPVP---------PNAYTYFPV-VRALCARGRIADALAVLD 146
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
M + P +Y+V++ + F A+ + + DV N++++ C
Sbjct: 147 EMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQ 205
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D AL L R++ GC P+VVS+N +++G +++ + EM+ + C + VT
Sbjct: 206 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ LC G + E++ G P Y +++ +C EG+ +A E+++ +
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 325
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+V+ TL++GL + E L+ +M + D VTFN L++ C G
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L +G PD +TY +++G+ +E E L+ M G P+ +Y +
Sbjct: 386 VIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445
Query: 479 GLSNARKSV 487
GL +A + V
Sbjct: 446 GLCSAERWV 454
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN ++ G+ + + + A + V P+ T+ ++ C + AL + EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P ++ ++ F V + ++ GC C ++++ +C++G V
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L+ D G P Y +++ LC G E+++E+ + P+++ TLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L R ++ +M++ G PD + +++ +C G A + + GL
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
P+ + Y+ L+ G R +E E L+ EM D+ D T+N +D
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 104/229 (45%), Gaps = 14/229 (6%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
++ +++ L S+ R+ + +++ + CP + F+ +N K +
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLN----------PITFNTLINFLCKKGLV 488
Query: 171 NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + M L++G P + Y+ +I+G K + D+AL + MV + P+ + ++
Sbjct: 489 EQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+ S R + + + +F +++ + V +N +I + + + M+
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
GC + T IL+ GL +EG V +A E++ + +G L K +FG+V
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGIV 655
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 163/329 (49%), Gaps = 3/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ + +R G L + MR K+I P+ YN LINGFVK + A ++
Sbjct: 248 YNMFIDSLCRNSRSAQGYLVLKKMRNKMIT--PNEVSYNTLINGFVKEGKIGVATRVFNE 305
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + P+++T+NILI+G+C N F+ AL + M PN V+ TL+ G + K
Sbjct: 306 MIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAK 365
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
FD N+ + ++ +++DGLC G + +A +L+I+ + GV P +
Sbjct: 366 FDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSV 425
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C GN A EV+ +++++G +P+ + +TLI ++ EA M G
Sbjct: 426 LINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNG 485
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
D+ T N L+ LC+ G+ V+A+ S GL P+ +T+ +++GY
Sbjct: 486 QNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAF 545
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++ + M+ G P TY S + L +
Sbjct: 546 SVFDRMISCGHHPSPFTYGSLLKVLCKGQ 574
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 146/331 (44%), Gaps = 35/331 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN L++ K F AL M ++ DV T+N+ I CRN + +
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLV 267
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++MR K PN VS+NTLI GF E K + EMIEL + +T IL++G C
Sbjct: 268 LKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCI 327
Query: 308 EGRVLKACELVIDFSRRGVLPKD---------------FD-------------------- 332
G +A ++ V P + FD
Sbjct: 328 NGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCIS 387
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ +++ LC G A +++ E+ K G P +I + LI G ++ +A +M K+
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIY 447
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+EG +P++V F+ L+ + C VG +A + + G + D T + LV+ +
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E E ++ + G +P+ T++ ++G +N
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANV 538
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 156/400 (39%), Gaps = 72/400 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + + L + M D RP+ L+NG K +FD A +R
Sbjct: 318 YNILINGYCINGNFEEALRVLDVMEA-NDVRPNEVTIGTLLNGLYKSAKFDVARNILERY 376
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF------ 270
+R + ++ ++I G CRN D A L EM + G +P++++F+ LI GF
Sbjct: 377 CINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNI 436
Query: 271 -----FGERKFDEG-----------------VNMAYEMIEL-------GCEFSSVTCEIL 301
+ + EG V YE ++ G + TC L
Sbjct: 437 NKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSL 496
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
V LC G++++A E + SR G++P + ++ G+ A V D + G+
Sbjct: 497 VASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGH 556
Query: 362 LPS-----------------------------------VIACTTLIEGLRRLRKGVEASG 386
PS I+ TLI + + +EA
Sbjct: 557 HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVR 616
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGY 445
L E+M++ ILPDS T+ C+L L GR V A L L + L + + Y + G
Sbjct: 617 LFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGL 676
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + K L EM ++G DL NS DG S K
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGK 716
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 155/362 (42%), Gaps = 38/362 (10%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
C +F + +++ + + F +M LI G +PSV N+++ VK
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSM--LIRGFKPSVYTCNMIMASMVKNCRAHL 158
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
F+ +M+ RV P+V +FNILIS C K A+ + M G P +VS+NTL+
Sbjct: 159 VWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLS 218
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ +F + + + M G + T + +D LC R + ++ + + P
Sbjct: 219 WCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITP 278
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ Y L+ EG G+A V +E+ + P++I LI G EA ++
Sbjct: 279 NEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVL 338
Query: 389 EKMLKEGILPDSVT------------------------------FNC-----LLEDLCDV 413
+ M + P+ VT NC +++ LC
Sbjct: 339 DVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRN 398
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G +A +L + G+ PD +T+ +L++G+ + + + +++++ EGF+P+ +
Sbjct: 399 GLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIF 458
Query: 474 NS 475
++
Sbjct: 459 ST 460
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 146/363 (40%), Gaps = 71/363 (19%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ V+I+G + D+A M +D V PD++TF++LI+GFC+ + A + ++
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIY 447
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G PN V F+TLI E + M G + TC LV LC G+++
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS-------- 364
+A E + SR G++P + ++ G+ A V D + G+ PS
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLL 567
Query: 365 ---------------------------VIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
I+ TLI + + +EA L E+M++ IL
Sbjct: 568 KVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNIL 627
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRL--RLLAST--------------------------- 428
PDS T+ C+L L GR V A RL+
Sbjct: 628 PDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALY 687
Query: 429 -------KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
KGL D + + + GY+R + +L+++ ++ IP+L T+N + G S
Sbjct: 688 LFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYS 747
Query: 482 NAR 484
+
Sbjct: 748 RGQ 750
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 138/298 (46%), Gaps = 8/298 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ +N+L++G+ + ++ Y+ M R P+ +T++ LI G C + +L + +
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM----IELGCEFSSVTCEILVD 303
+ + + ++FN LIR D+ +++ + M + L + ++LV
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
+ ++ + E++ ++G +P Y +++++C G+ A ++ D++ G
Sbjct: 854 RMVSQNYFVFMHEML----KKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISL 909
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
A ++ GL K EA ++++ML+ +P + TF L+ C +A L+
Sbjct: 910 DDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLK 969
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+L + D + Y++L+S + E+ +G +P++ TY + +S
Sbjct: 970 ILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIS 1027
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 183 LIDGRPSVS----IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
L+D P S ++++LI +++ A+ + M+ KP V T N++++ +N
Sbjct: 94 LMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN 153
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ L F++M PNV SFN
Sbjct: 154 CRAHLVWSFFKQMLTSRVCPNVSSFN---------------------------------- 179
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
IL+ LC +G++ KA ++ R G +P Y L+ C +G AL ++ +
Sbjct: 180 -ILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMEC 238
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG V I+ L R + + +++KM + I P+ V++N L+ G+
Sbjct: 239 KGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGV 298
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A R+ L P+ +TY+IL++GY +E +++ M P+ T + ++
Sbjct: 299 ATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLN 358
Query: 479 GLSNARK 485
GL + K
Sbjct: 359 GLYKSAK 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 151/364 (41%), Gaps = 41/364 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLI-DG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
F +N F K +N A E M K+ +G P+ I++ LI K +A+ FY
Sbjct: 423 FSVLINGFCKVGNINK---AKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYA 479
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FG 272
M + D T N L++ C N K A + G PN V+F+ +I G+ G
Sbjct: 480 AMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVG 539
Query: 273 ERK-----FDEGVNMAY--------EMIELGCE--------------------FSSVTCE 299
+ FD ++ + ++++ C+ +++
Sbjct: 540 DGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYN 599
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ + G +L+A L + + +LP + Y ++ L EG A + L +K
Sbjct: 600 TLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659
Query: 360 GNLP-SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
L + I T I+GL + + A L ++M ++G+ D + N + + +G+
Sbjct: 660 EILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFS 719
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L K + P+ T++IL+ GY+R L N M GF P+ TY+S +
Sbjct: 720 ASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLIL 779
Query: 479 GLSN 482
GL N
Sbjct: 780 GLCN 783
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P FD L+ +G G A+ + +G PSV C ++ + + +
Sbjct: 105 PAVFDL--LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 162
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ML + P+ +FN L+ LC G+ A + + G P ++Y+ L+S +
Sbjct: 163 FKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ R K L++ M +G D+ TYN ++D L +S +
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQ 263
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 35/236 (14%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C+ N F+ LIR + + VN M+ G + S TC +++ + R
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
V P + L+ LC +G
Sbjct: 161 SFFKQMLTSRVCPNVSSFNILISVLCVQG------------------------------- 189
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+L+K V +ME+ G +P V++N LL C GR A L KG+ D
Sbjct: 190 -KLKKAVNILTMMER---NGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADV 245
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
TY++ + R +R +G ++ +M ++ P+ +YN+ ++G K TR
Sbjct: 246 CTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATR 301
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 36/341 (10%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L +G +P++ IYN +IN K A ++ + PD T+ +I G CR
Sbjct: 375 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 434
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
D AL +F +M ++GC PN V+++TLI G + +E ++ EMI G ++ TC
Sbjct: 435 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 494
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+ LC+ G A L +D +G P + Y L+ LC G +A+ + + +
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554
Query: 360 GNLPSVIACTTLIEGL---RRL-----------RKGV---------------------EA 384
G P+ + LI L RR+ R G+ +A
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+M ML+ G + VT+N +++ CD G T A R+ L G PD +Y L+ G
Sbjct: 615 MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + ++ + L NEM+D+G P+ TY + +DG K
Sbjct: 675 FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 715
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 153/355 (43%), Gaps = 31/355 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + + L + MR DG +P Y LI GF K + + A G ++
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMR---DGGCKPDEWSYTELICGFCKISKMESAFGLFN 689
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV D + P+ VT+ LI G+C+++K D A L M+ GC PNV ++N LI G +
Sbjct: 690 EMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQN 749
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F + MIE G + VT ++DGLC G A E+ +G LP Y
Sbjct: 750 NFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYS 809
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A + EL + G +P I +IE K A + +M+K
Sbjct: 810 SLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKA 869
Query: 395 GILPDSVTFNCLLEDL--------------------CDVG-RTVDADRLRLL-ASTKGLD 432
G P T+ L++ L C G +T D D + ++ A LD
Sbjct: 870 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 929
Query: 433 PDGMTYHI---LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
P G++ + LVS + R E L+ M+ +G PD YNS + L R
Sbjct: 930 P-GLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 983
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 160/344 (46%), Gaps = 12/344 (3%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR----PSVSIYNVLIN 198
S DG+F P ++ +N V+ R+ + M GR ++ YN +I
Sbjct: 552 SRDGVF--PNTV-TYNALINILVENRRIKYAFVVLNLM-----GRNGLFTNIVTYNEMIK 603
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
G+ + KA+ + M++ ++VT+N +I G+C + AL + MR+ GC P
Sbjct: 604 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ S+ LI GF K + + EM++ G + VT L+DG C + ++ A L+
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
R G P Y L+ L + N A E+ + ++G P+V+ T +I+GL +
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
A + KM+++G LP+ +T++ L+ L G+ +A+ L GL PD +TY
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
++ Y + + N + M+ G P L TY + GL N
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN 887
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y RM+ + V+P+++ +N +I+ C++ A + +++ E +P+ ++ ++I G
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D + + +M + GCE ++VT L++GLC+ GRV +A +L+ + G+LP
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
G + LC G A + ++ KG P+V T LI GL A GL +M
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G+ P++VT+N L+ L + R A + L GL + +TY+ ++ GY K
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPK 612
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ ++N ML G +L TYN+ + G ++ + R
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A R +D + P+V Y LI+G A+G + RM RD V P+ VT+N LI
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELG 290
+ N++ A + M G N+V++N +I+G+ G+ K + + + M++ G
Sbjct: 568 NILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPK--KAMLVMNNMLQRG 625
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT ++ G C+ G A ++ G P ++ Y L+ C A
Sbjct: 626 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 685
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ +E+ G P+ + T LI+G + K A+ L+E M + G P+ T+N L+ L
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
A+ L + +G+ P+ +TY ++ G + + N+M+++G +P+L
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805
Query: 471 ATYNSYMDGLSNARK 485
TY+S + L K
Sbjct: 806 LTYSSLIRALGQEGK 820
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 60/377 (15%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
+DG+ CP E + ++ + K +++ E M++ RP+V YNVLI+G K
Sbjct: 693 DDGL--CPN-EVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNVLIHGLTKQ 748
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
F A M+ + + P+VVT+ +I G C+N LAL +F +M E+GC PN++++
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808
Query: 264 NTLIRGFFGERKFDEGVNMAYE-----------------------------------MIE 288
++LIR E K +E N+ E MI+
Sbjct: 809 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868
Query: 289 LGCEFSSVTCEILVDGLCNE----GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
GC+ + T +L+ GL NE + L A V+ G D D ++ E
Sbjct: 869 AGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL 928
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ G++++V + L+ L + EA+ L+ M+ +G+ PD +N
Sbjct: 929 DPGLSVQVQN---------------ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 973
Query: 405 CLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
LL L V R VD A + ST+G + Y L+ + +RRKE ML
Sbjct: 974 SLLCSLLRV-RNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLM 1032
Query: 464 EGFIPDLATYNSYMDGL 480
+ PD +DGL
Sbjct: 1033 RTWNPDDVVQAVLIDGL 1049
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ +D L + G + A + L+ L RL +ML EG+ P+ + +N ++
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G DA+ + + PD TY ++ G+ R++ + N+M EG P+
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454
Query: 470 LATYNSYMDGLSNARK 485
TY++ ++GL ++ +
Sbjct: 455 TVTYSTLINGLCDSGR 470
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%)
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D + A +D SV + N L++ + +A M+ + PD +N
Sbjct: 915 QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNS 974
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ R + DLA+G+F+ M +GC ++ + LI + E M+
Sbjct: 975 LLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRT 1034
Query: 291 CEFSSVTCEILVDGLCNEG 309
V +L+DGL +G
Sbjct: 1035 WNPDDVVQAVLIDGLLRDG 1053
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 177/427 (41%), Gaps = 49/427 (11%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F++ A T S + T F++ SL + F + V +S CP +FS
Sbjct: 197 FYLLARKGTFPSLK----TCNFLLSSLVKANEFEKCCEVFRVMSEGACP----DVFS--- 245
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKL------------IDG-------------- 186
F +NA K +M + + F M KL I+G
Sbjct: 246 ----FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 301
Query: 187 --------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
+P++ Y LING +K FDK D M+ P+VV FN LI G+C+
Sbjct: 302 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKM 361
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ AL + M K P V+ +L++GF + + N E++ G C
Sbjct: 362 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 421
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+V LC + R A R P D LV LC +G A E+ L +
Sbjct: 422 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 481
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG+ S + LI GL K EAS ++++ML+ G+ D +T+N L+ C+ G+
Sbjct: 482 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 541
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
RLR + +G+ PD TY+ L+ G + + L +E G I ++ TY M+
Sbjct: 542 CFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMME 601
Query: 479 GLSNARK 485
G A +
Sbjct: 602 GYCKANR 608
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI GF + + + M + ++PD+ T+N L+ G C K D A+ L+ E +
Sbjct: 526 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 585
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G N+ ++ ++ G+ + ++ N+ E++ E +S+ I++ C G V
Sbjct: 586 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVA 645
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ + +G+LP Y L+ +C G A ++DE+ K+G +P+V+ T LI
Sbjct: 646 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 705
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + A +M+ I P+ T+ +++ C +G A+ L + G+
Sbjct: 706 GGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 765
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
PD +TY++L +G+ + N + ++M EG D TY + + G +
Sbjct: 766 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWN 814
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 1/304 (0%)
Query: 181 RKLIDGRPSVSIY-NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L G P+ + N LI+G + +A M+ + D +T+N LI GFC
Sbjct: 478 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
K + L EM ++G P++ ++N L+RG K D+ + + E G + T
Sbjct: 538 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 597
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I+++G C R+ L + + + Y +++ C GN AL++++ + K
Sbjct: 598 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G LP+ ++LI G+ + +A L+++M KEG +P+ V + L+ C +G+ A
Sbjct: 658 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 717
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + + P+ TY +++ GY + ++ NL+ +M + G +PD+ TYN +G
Sbjct: 718 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNG 777
Query: 480 LSNA 483
A
Sbjct: 778 FCKA 781
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 2/279 (0%)
Query: 203 CREF--DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
C++F A F M+ +P + +L+ G C++ K A L+ + EKG +
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V+ N LI G G K E + EM+E G +T L+ G CNEG+V L +
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
++RG+ P + Y L+ LC G A+++ DE G + ++ ++EG + +
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+ L ++L + + +S+ +N +++ C G A +L +KG+ P+ TY
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L+ G ++ ++L++EM EGF+P++ Y + + G
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++F + +++D + ++ + LI ++ Y +++ G+ K + ++
Sbjct: 561 YNFLLRGLCNVGKLDDAIKLWDEFKASGLIS---NIHTYGIMMEGYCKANRIEDVENLFN 617
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ +++ + + +NI+I C+N AL L M+ KG PN ++++LI
Sbjct: 618 ELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH------ 671
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
G+CN G V A L+ + + G +P Y
Sbjct: 672 -----------------------------GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 702
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G A E+ P+ T +I+G +L +A+ L+ KM +
Sbjct: 703 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 762
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
GI+PD VT+N L C +A ++ +T+GL D +TY LV G+
Sbjct: 763 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 37/242 (15%)
Query: 262 SFNTLIRGF---FGERKFDEGVNMAYEMIELGCEFSSVTCEILV---------------- 302
+F+ LI + F F V++ Y + G S TC L+
Sbjct: 173 AFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF 232
Query: 303 ------------------DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+ LC G++ A EL + + G+ P Y ++ LC G
Sbjct: 233 RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A E+ +++ KG P++ LI GL +L + + ++++M+ G P+ V FN
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFN 352
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C +G A +++ + +K + P +T + L+ G+ + ++ + EN + E+L
Sbjct: 353 NLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSS 412
Query: 465 GF 466
G
Sbjct: 413 GL 414
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 209/458 (45%), Gaps = 55/458 (12%)
Query: 62 LTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDS--FRHDHTTFLFIVRSL 119
+ P +++ P LL L S+ H P H+ IF A F H+ T+ I L
Sbjct: 40 IKPWPHRLNPK-LLSSLISR-QHDP---HFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKL 94
Query: 120 ASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
+ FSE+ S+L + ++P C + P + I + + K R L E+
Sbjct: 95 SKFRCFSEIESLLAGLRSSPPHCCGEE----PIVTVIRGYGLAG--KPVRALKTFLRIES 148
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKA-LGFYDRMVRDRVKPDVVTFNILISGFCRN 238
RPSV N L+N V+ + + A L F + R RV P+VV+ NIL+ C+
Sbjct: 149 F----GIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKG 204
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ ++A+ + EM G PNVVS+ T++ GF D + + E+++ G +
Sbjct: 205 NEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSY 264
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL-------- 350
+LVDG C G+++ A ++ GV P + Y +++ C E +G A+
Sbjct: 265 TVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIA 324
Query: 351 -----------EVVDELWKKGN-----------------LPSVIACTTLIEGLRRLRKGV 382
+VVD L ++GN L + +TLI L + K +
Sbjct: 325 KDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVL 384
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA + ++ K G + +T+N L+ LC+ G +A RL KG+ P+ TY++L+
Sbjct: 385 EARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLI 443
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G+ + KEG ++ EML+ +P+ +TY +DG+
Sbjct: 444 KGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGI 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
G + + LI+ K + +A +D + V ++T+N LI+G C + A
Sbjct: 363 GLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSV-ASLLTYNTLIAGLCEGGELCEAA 421
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L+ +M EKG PN ++N LI+GF EG+ + EM+E C + T IL+DG+
Sbjct: 422 RLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGI 481
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + + V+ + + D + V+ + G N G A
Sbjct: 482 LLLGGMKQEINKVVSLAMSTGVDADL-WNIFVKPVVGNDNGGEA 524
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+LP+ V+ N LL+ LC A ++ GL P+ ++Y ++ G+
Sbjct: 187 VLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAM 246
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ E+LD G+ PD+ +Y +DG K V R
Sbjct: 247 KVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIR 282
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G +P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 194/432 (44%), Gaps = 24/432 (5%)
Query: 30 SRPETPPVTLPSVT-LTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQF 88
SR + V +P V L + + L KTHL TN P +LLH L +
Sbjct: 28 SRFNSSCVNIPDVVDLIAKQYWSEL----KTHL-KSTN----PIALLHQLLTSGADSDLT 78
Query: 89 THYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIF 148
Y F W+ H ++ SLA + ++S++ S L+ N IF
Sbjct: 79 LRY----FTWSQKELKLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQNDKNYPVSFIF 134
Query: 149 SCPEMERIFHFA----VNAFVKANRMN-DGLLAFEAMRKLIDG--RPSVSIYNVLINGFV 201
+ A V+ V A+ N L FEA ++ D + SV+ N L++G V
Sbjct: 135 HAISVSGDSFCANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLV 194
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
K + D L M D + P+ VTFNILI GFC +K +A+ +F EM +G PNVV
Sbjct: 195 KMYKADAIL---KEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVV 251
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++N+LI G K +E + +M+ E + +T L++G C V +A EL D
Sbjct: 252 TYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDM 311
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
++ + P Y L++ C + N A + + KG P V LI GL R
Sbjct: 312 PKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDL 371
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A + +M + + D +T+N L++ LC+ G RL KGL P +TY+ +
Sbjct: 372 EGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTM 431
Query: 442 VSGYTRENRRKE 453
+ GY++E ++
Sbjct: 432 IDGYSKEGNLRQ 443
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 6/273 (2%)
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
D + + +IL+ +N K L F+ + G +V S N L+ G K D
Sbjct: 142 DSFCANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKMYKADA 201
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM G + VT IL+DG CN+ V A ++ + +R+GV P Y L+
Sbjct: 202 ---ILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLIN 258
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G A + D++ P++I L+ G + + +A L E M K+ I P
Sbjct: 259 GLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITP 318
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ T+N L++ C DA L + KG+ PD TY+ L+ G R+ + N V
Sbjct: 319 NVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRV 378
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNA---RKSVR 488
+EM + DL TYN MD L N +K++R
Sbjct: 379 SEMDTKHLKADLITYNILMDSLCNKGEMKKTLR 411
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 31/352 (8%)
Query: 165 VKANRMNDGLLA---FEAMRKLIDGRP-----SVSIYNVLINGFVKCREFDKALGFYDRM 216
V N M +G + FE R + D S+ YN+ + G V+ + +A + M
Sbjct: 298 VTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+KP++ ++NIL+ G C+ F A + MRE G P+ V+++TL+ G+ K
Sbjct: 358 AEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKI 417
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EMI++GC + TC IL+ L EGR +A +L+ + RG + +
Sbjct: 418 LEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTM 477
Query: 337 VEKLCGEGNAGIALEVVDELWKKGN-----------------------LPSVIACTTLIE 373
+ LC GN A+E+V +W +G+ LP I T+I
Sbjct: 478 INGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIG 537
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL ++ + EA + +M+ + + PDS+ F+ + + C G+ A R+ KG +
Sbjct: 538 GLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNK 597
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ L+ G EN+ E L++EM + G P++ TYN+ + LS K
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 5/298 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P +N+LI+ + + A +D+M KP+ + IL+ G+CR +
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EMR G PN V++NT+I GE + E + +M E+G VT + LC
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALC 269
Query: 307 NEGRVLKACELVIDFSRRGVL----PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G++L+A + D + P Y ++E C EG A + D + K
Sbjct: 270 KSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSET 328
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
S+ + + GL R K +EA ++ +M ++ I P+ ++N L+ LC G DA +
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L G+ PD +TY L+ GY R + E ++ EM+ G P++ T N + L
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSL 446
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 145/349 (41%), Gaps = 59/349 (16%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R ++ + V++ ++ + L M + + +P++ YN+L++G K F A
Sbjct: 332 RSYNIWMLGLVRSGKLLEAHLILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILG 390
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV-------------- 260
M V PD VT++ L+ G+CR K A + REM + GC PN+
Sbjct: 391 LMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEG 450
Query: 261 ---------------------VSFNTLIRGFFGERKFDEGVNMAYEMIELG--------- 290
V+ NT+I G D+ + + M G
Sbjct: 451 RASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGN 510
Query: 291 --------------CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
C S+T ++ GLC GRV +A + +++ + + P +
Sbjct: 511 SFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTF 570
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +G A V+ E+ KKG S+ +LI+GL + E GLM++M + GI
Sbjct: 571 IYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI 630
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
P+ T+N ++ L + G+ DA L KG+ P+ T+ IL+ +
Sbjct: 631 FPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAF 679
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y +I G K D+A M+ ++ PD + F+ I +C+ K A +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM +KGCN ++ ++N+LI+G E + E + EM E G + T ++ L
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDY---FGLVEKLCGEGNAGIALEVVDEL-WKKGNLP 363
G++ A L+ + ++G+ P + + G K C G A E+ L K +L
Sbjct: 647 GGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLY 706
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL- 422
S + L G + ++A L E L + + + L+E LC G+ DA +
Sbjct: 707 SFMFNELLAGG-----ETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFIL 761
Query: 423 -RLLASTKGLDP 433
+++ DP
Sbjct: 762 HKMMDKQYSFDP 773
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 27/228 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF + + K +++ + M K S+ YN LI G + + G D
Sbjct: 566 IFDTFIYNYCKQGKLSSAFRVLKEMEK-KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDE 624
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+V T+N +IS K A L EM +KG +PN+ +F LI FF
Sbjct: 625 MKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACD 684
Query: 276 FDEGVNMAYEMIELG---CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
F A E+ E+ C + + L G LKA EL R + K+F
Sbjct: 685 F----GAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFL 740
Query: 333 YFGLVEKLCGEGNAGIA-------------------LEVVDELWKKGN 361
Y L+EKLC +G A + V+DEL K+G+
Sbjct: 741 YRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGS 788
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L + M + P + TFN L+ LC++G +A + S KG P+ + ILV GY
Sbjct: 140 LYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R G +L++EM G +P+ YN+ + L ++V +
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEK 244
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 39/186 (20%)
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E RV L D + V P+ + + L+ LC G A EV D++ +KG P+ +
Sbjct: 131 ESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFS 190
Query: 368 CTTLIEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
L+ G R G+ + G L+++M G LP+ V +N
Sbjct: 191 LGILVRGY--CRAGLHSHGIDLLDEMRSSGALPNRVAYN--------------------- 227
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++S E + E E LV +M + G PD+ T+N + L + +
Sbjct: 228 --------------TVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273
Query: 486 SVRQTR 491
+ +R
Sbjct: 274 ILEASR 279
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 31/352 (8%)
Query: 165 VKANRMNDGLLA---FEAMRKLIDGRP-----SVSIYNVLINGFVKCREFDKALGFYDRM 216
V N M +G + FE R + D S+ YN+ + G V+ + +A + M
Sbjct: 298 VTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+KP++ ++NIL+ G C+ F A + MRE G P+ V+++TL+ G+ K
Sbjct: 358 AEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKI 417
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EMI++GC + TC IL+ L EGR +A +L+ + RG + +
Sbjct: 418 LEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTM 477
Query: 337 VEKLCGEGNAGIALEVVDELWKKGN-----------------------LPSVIACTTLIE 373
+ LC GN A+E+V +W +G+ LP I T+I
Sbjct: 478 INGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIG 537
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL ++ + EA + +M+ + + PDS+ F+ + + C G+ A R+ KG +
Sbjct: 538 GLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNK 597
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ L+ G EN+ E L++EM + G P++ TYN+ + LS K
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 5/298 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P +N+LI+ + + A +D+M KP+ + IL+ G+CR +
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EMR G PN V++NT+I GE + E + +M E+G VT + LC
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALC 269
Query: 307 NEGRVLKACELVIDFSRRGVL----PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G++L+A + D + P Y ++E C EG A + D + K
Sbjct: 270 KSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSET 328
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
S+ + + GL R K +EA ++ +M ++ I P+ ++N L+ LC G DA +
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L G+ PD +TY L+ GY R + E ++ EM+ G P++ T N + L
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSL 446
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 145/349 (41%), Gaps = 59/349 (16%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R ++ + V++ ++ + L M + + +P++ YN+L++G K F A
Sbjct: 332 RSYNIWMLGLVRSGKLLEAHLILNEMAE-KNIKPNLYSYNILVHGLCKYGMFSDARSILG 390
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV-------------- 260
M V PD VT++ L+ G+CR K A + REM + GC PN+
Sbjct: 391 LMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEG 450
Query: 261 ---------------------VSFNTLIRGFFGERKFDEGVNMAYEMIELG--------- 290
V+ NT+I G D+ + + M G
Sbjct: 451 RASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGN 510
Query: 291 --------------CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
C S+T ++ GLC GRV +A + +++ + + P +
Sbjct: 511 SFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTF 570
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +G A V+ E+ KKG S+ +LI+GL + E GLM++M + GI
Sbjct: 571 IYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGI 630
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
P+ T+N ++ L + G+ DA L KG+ P+ T+ IL+ +
Sbjct: 631 FPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAF 679
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y +I G K D+A M+ ++ PD + F+ I +C+ K A +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM +KGCN ++ ++N+LI+G E + E + EM E G + T ++ L
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDY---FGLVEKLCGEGNAGIALEVVDEL-WKKGNLP 363
G++ A L+ + ++G+ P + + G K C G A E+ L K +L
Sbjct: 647 GGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLY 706
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL- 422
S + L G + ++A L E L + + + L+E LC G+ DA +
Sbjct: 707 SFMFNELLAGG-----ETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFIL 761
Query: 423 -RLLASTKGLDP 433
+++ DP
Sbjct: 762 HKMMDKQYSFDP 773
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 27/228 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF + + K +++ + M K S+ YN LI G + + G D
Sbjct: 566 IFDTFIYNYCKQGKLSSAFRVLKEMEK-KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDE 624
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+V T+N +IS K A L EM +KG +PN+ +F LI FF
Sbjct: 625 MKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACD 684
Query: 276 FDEGVNMAYEMIELG---CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
F A E+ E+ C + + L G LKA EL R + K+F
Sbjct: 685 F----GAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFL 740
Query: 333 YFGLVEKLCGEGNAGIA-------------------LEVVDELWKKGN 361
Y L+EKLC +G A + V+DEL K+G+
Sbjct: 741 YRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGS 788
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L + M + P + TFN L+ LC++G +A + S KG P+ + ILV GY
Sbjct: 140 LYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R G +L++EM G +P+ YN+ + L ++V +
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEK 244
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 39/186 (20%)
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E RV L D + V P+ + + L+ LC G A EV D++ +KG P+ +
Sbjct: 131 ESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFS 190
Query: 368 CTTLIEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
L+ G R G+ + G L+++M G LP+ V +N
Sbjct: 191 LGILVRGY--CRAGLHSHGIDLLDEMRSSGALPNRVAYN--------------------- 227
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++S E + E E LV +M + G PD+ T+N + L + +
Sbjct: 228 --------------TVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273
Query: 486 SVRQTR 491
+ +R
Sbjct: 274 ILEASR 279
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 43/349 (12%)
Query: 174 LLAFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFYDRMVRD---RVKPDVVT 227
LL L+D PSV YN ++ + D+A M + +P+ V+
Sbjct: 58 LLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ +L+ C ++ D A+GL R MR G +VV++ TLIRG + D+ V + EM
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
E G E + V L+ G C GR ++ ++ S +G+ P Y GL++ LC G A
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL- 406
A V+D + ++G P+V+ LI + + EA G+++KM ++G+ PD VT+N L
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297
Query: 407 ------------------------------------LEDLCDVGRTVDADRLRLLASTKG 430
++ LCD+GR A ++R + G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +TY++L+ G R ++ ++ L++EM G PD TY+ + G
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 7/308 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR--VKPDVVTFNILISGFCRNKKFDLAL 245
P V YN LI G E D+A+ + MVR + VKP+VVTFN +I G C + A
Sbjct: 288 PDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAF 347
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ M E GC N+V++N LI G K + + + EM LG E S T IL+ G
Sbjct: 348 QVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGF 407
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP-S 364
C +V +A +L+ RG+ P+ F Y L+ +C +G A + +E+ N P
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLD 465
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+A +T+I G + A L++ ++ EG+ PD+VT++ ++ G A+ +
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL--SN 482
+ G PD + L+ GY+ + + L+ EM+ + D ++ L SN
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASN 585
Query: 483 ARKSVRQT 490
K++ Q+
Sbjct: 586 EGKALLQS 593
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ ++ T L+ L R +A GL+ M G+ D VT+ L+ LCD A L
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G++P+ + Y L+ GY + R ++ + EM ++G PD+ Y +D L
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 483 ARKS 486
K+
Sbjct: 233 VGKA 236
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 209/462 (45%), Gaps = 40/462 (8%)
Query: 46 PTAHHTHLL----RFLKTHLLTP----TNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFA 97
P+ HH + LK++ +TP +++P ++ + + Q IF
Sbjct: 68 PSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQ-----QNLDLALQIFD 122
Query: 98 WASTID-SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS---------NDGI 147
A +F H++ T+L ++ L+ + F + ++++ + + C N G
Sbjct: 123 HAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGF 182
Query: 148 FSCPEME----------------RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS 191
P++ R F+ +N V+ R + L F+ RK P+V
Sbjct: 183 AGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVF 242
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
N+L+ K + D A+ + M P+VVT+ ++ G+ A +F E+
Sbjct: 243 TCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEI 302
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++G P+ ++ L+ G+ + +F + V + EM E E + VT ++++ C E +
Sbjct: 303 LDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS 362
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ L+ D + +P +++ LC EG +A E+ +L KK P +TL
Sbjct: 363 GEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTL 422
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I L + K EA L ++ ++G +P ++T+N L+ +C+ G +A RL KG
Sbjct: 423 IHWLCKEGKVWEARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGC 481
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
P+ TY++L+ G+ + +EG ++ EMLD G +P+ ATY
Sbjct: 482 VPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 34/293 (11%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +I K R F+ ++ + ++K F +I + + LA+ F +
Sbjct: 138 YLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIP 197
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G P+V SFNTL+ ++FD ++ L +
Sbjct: 198 SFGLQPSVRSFNTLLNTLVQNKRFD--------LVHL---------------------MF 228
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
K C + G++P F LV+ LC + + A+ V++E+ G +P+V+ TT++
Sbjct: 229 KNCR-----KKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G V A + ++L G +PD T+ L++ C GR +DA ++ ++
Sbjct: 284 GGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ +TY +++ Y +E + E NL+++ML++ +IP A +D L K
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGK 396
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
K G +P+V C L++ L + A ++E+M G +P+ VT+ +L G V
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A R+ +G PD TY IL+ GY ++ R + +++EM + P+ TY +
Sbjct: 294 GARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVII 353
Query: 478 DGLSNARKS 486
+ +KS
Sbjct: 354 EAYCKEKKS 362
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 146/282 (51%), Gaps = 1/282 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R+N L F+ G+ Y+ +++G K D+A+ ++M +
Sbjct: 403 IHGLCKNGRLNKALKIFKEAEDG-PGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRG 461
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
K D N LI+GF R K + A+ FREM KGC+P +VS+NTLI+G +F E
Sbjct: 462 YKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAY 521
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+E + +TC +L+DGLC E ++ A L +G P Y L+ L
Sbjct: 522 SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGL 581
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C AL++ + + +P+++ TL+EGL ++R +AS + + +LK+G+ PD
Sbjct: 582 CSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDI 641
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+++N ++ LC R DA A +G+ P +T++ILV
Sbjct: 642 ISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 182/451 (40%), Gaps = 83/451 (18%)
Query: 107 HDHTTFLFIVRSLASSYRF-SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
H F I+R LA+ R S + +++ + A CPC D + + A+
Sbjct: 42 HSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALT----------VIKAYA 91
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD------------------ 207
K N L F+ M+ + +P V YN L+N FV+ E+D
Sbjct: 92 KNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNL 151
Query: 208 -----------------KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
KA+ D M +KPDV ++ LI+G + AL +F E
Sbjct: 152 QTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDE 211
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF--SSVTCEILVDGLCNE 308
M +G +V +N LI GFF +D+G + +E + C + VT I+++GLC
Sbjct: 212 MSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI-WERLVKDCSVYPNVVTYNIMINGLCKC 270
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE----------VVD---- 354
GR ++ E+ ++ F Y L+ LC GN A+ VVD
Sbjct: 271 GRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH 330
Query: 355 -----------------ELWK---KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
ELW K N +V++ LI+GL K EA + E + K+
Sbjct: 331 NAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKK 390
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P+S T+ L+ LC GR A ++ A D Y +V G +E R E
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++VN+M G+ D N ++G A K
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASK 481
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 157/325 (48%), Gaps = 2/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F +A ++ + + M K + +V YN+LI G + + ++A+ ++ + +
Sbjct: 334 LNGFCRAGKIKESFELWMVMGK--ENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKG 391
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P+ T+ +LI G C+N + + AL +F+E + + ++++++ G E + DE +
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAI 451
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M + G + C L++G ++ A + +G P Y L++ L
Sbjct: 452 SIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGL 511
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A V E+ +K P +I C+ L++GL + +K A L ++ L +G PD
Sbjct: 512 CKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDI 571
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+N L+ LC V + DA +L P+ +T + L+ G + ++ + +
Sbjct: 572 TMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDC 631
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
+L +G PD+ +YN + GL + +
Sbjct: 632 ILKDGLHPDIISYNITIKGLCSCSR 656
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N FV+A+++ D + F M + P++ YN LI G K F +A F M+
Sbjct: 473 INGFVRASKLEDAINFFREM-ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE 531
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KPD++T ++L+ G C+ KK ++AL L+++ +KG P++ +N L+ G K ++ +
Sbjct: 532 WKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDAL 591
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M C + VT L++GL KA E+ + G+ P Y ++ L
Sbjct: 592 QLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
C A+E +++ +G LP+ + L+ R
Sbjct: 652 CSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVNFR 690
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+ +G PD TY + +DG
Sbjct: 303 IMKGLKPDKITYTTLIDG 320
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 143/330 (43%), Gaps = 35/330 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN ++ G + + + MVR P++VTFN LIS CRN F+
Sbjct: 261 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 320
Query: 247 LFREMREKGCNP-----------------------------------NVVSFNTLIRGFF 271
+ +M E GC P NVV +NTL++G
Sbjct: 321 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 380
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+++E + EM + C VT ILVD C G V + EL+ G +P
Sbjct: 381 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 440
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y ++ C EG A+ ++ + G P+ I+ T +++GL + V+A LM +M
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 500
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+++G + +TFN L+ LC G A L G PD ++Y ++ G + +
Sbjct: 501 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 560
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
E L+N M+++G P+ Y+S LS
Sbjct: 561 DEALELLNVMVNKGMSPNTIIYSSIASALS 590
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 177/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL + + C P++ R++ ++ K
Sbjct: 300 VTFNTLISYLCRNGLFERVHEVLAQMVEHGCT---------PDI-RMYATIIDGICKEGH 349
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN L+ G +++ M D VT
Sbjct: 350 LE---VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 406
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M E GC P+V+++ T+I GF E DE V + M
Sbjct: 407 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 466
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++++ I++ GLC+ R + A +L+ ++G + L+ LC +G
Sbjct: 467 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 526
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +G+ P+++ ++ +
Sbjct: 527 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 586
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + + M+ G +
Sbjct: 587 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 646
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 647 PNESTYTILIRGLAS 661
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 136/275 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+L++ F + D+ + ++M+ PDV+T+ +I+GFC+ D A+ L + M
Sbjct: 407 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 466
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
GC PN +S+ +++G ++ + ++ +MI+ GC + +T L++ LC +G V
Sbjct: 467 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 526
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL+ G P Y +++ L G ALE+++ + KG P+ I +++
Sbjct: 527 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 586
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L R + + + + + I D+V +N ++ LC G T A + G
Sbjct: 587 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 646
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
P+ TY IL+ G E KE + ++ E+ +G +
Sbjct: 647 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 159/369 (43%), Gaps = 11/369 (2%)
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+A R +L S +A P P P F V A R+ D L +
Sbjct: 134 VAGYCRAGQLESARRLAAAVPVP---------PNAYTYFPV-VRALCARGRIADALAVLD 183
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
M + P +Y+V++ + F A+ + + DV N++++ C
Sbjct: 184 EMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQ 242
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D AL L R++ GC P+VVS+N +++G +++ + EM+ + C + VT
Sbjct: 243 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 302
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ LC G + E++ G P Y +++ +C EG+ +A E+++ +
Sbjct: 303 NTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS 362
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+V+ TL++GL + E L+ +M + D VTFN L++ C G
Sbjct: 363 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 422
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L G PD +TY +++G+ +E E L+ M G P+ +Y +
Sbjct: 423 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 482
Query: 479 GLSNARKSV 487
GL +A + V
Sbjct: 483 GLCSAERWV 491
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN ++ G+ + + + A + V P+ T+ ++ C + AL + EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P ++ ++ F V + ++ GC C ++++ +C++G V
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L+ D G P Y +++ LC G E+++E+ + P+++ TLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L R ++ +M++ G PD + +++ +C G A + + GL
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
P+ + Y+ L+ G R +E E L+ EM D+ D T+N +D
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 412
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 104/229 (45%), Gaps = 14/229 (6%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
++ +++ L S+ R+ + +++ + CP + F+ +N K +
Sbjct: 476 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLN----------PITFNTLINFLCKKGLV 525
Query: 171 NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + M L++G P + Y+ +I+G K + D+AL + MV + P+ + ++
Sbjct: 526 EQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 583
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+ S R + + + +F +++ + V +N +I + + + M+
Sbjct: 584 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 643
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
GC + T IL+ GL +EG V +A E++ + +G L K +FG+V
Sbjct: 644 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGIV 692
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 185/431 (42%), Gaps = 55/431 (12%)
Query: 88 FTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE----LHSVLNFIS------- 136
FT F F W R + IV +LA S FS+ L ++ +
Sbjct: 160 FTALSF--FNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGED 217
Query: 137 --ANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
N C+ D C +F V A+++ R+ +GL +F M + + P+V N
Sbjct: 218 VFKNLILCTED----CNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLR-VGFVPTVITSN 272
Query: 195 VLINGFVKCREFDKALGFYDRMVR-----------------------------------D 219
L+NG +K D+ Y+ M R +
Sbjct: 273 YLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEE 332
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
PD+VT+N LI+ +CR + D A L++ M +G P++VS+ L+ G E + E
Sbjct: 333 GFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREA 392
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M+ G VT L+ G C EG++ ++ L+ D G+ P F + LVE
Sbjct: 393 HQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEG 452
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG AL +V EL + G S + LI L R + A L+E+M ++G +
Sbjct: 453 YGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXE 512
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+N L++ C +A L++ K + P+ TY ++ +R +R EGE+LV
Sbjct: 513 LEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVG 572
Query: 460 EMLDEGFIPDL 470
EM+ G +PDL
Sbjct: 573 EMVASGXLPDL 583
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LIN + + D A Y M R V PD+V++ L++G C+ + A L
Sbjct: 336 PDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQL 395
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M +G +P++V++NTLI G+ E K E ++ ++MI G S TC +LV+G
Sbjct: 396 FHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGK 455
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG+ L A LV++ R GV Y L+ LC E A +++ + + G+ +
Sbjct: 456 EGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEI 515
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ + EA L +M+ + I P+ T+ +J L + R+++ + L
Sbjct: 516 YNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMV 575
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G PD L GY REN + E+L++ E I D ++N+
Sbjct: 576 ASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNA 623
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 75/339 (22%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N++ + R++D ++ M R ++ P + Y L+NG K +A +
Sbjct: 341 YNTLINSYCRKGRLDDAFYLYKIMYRRGVV---PDLVSYTALMNGLCKEGRVREAHQLFH 397
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RMV + PD+VT+N LI G+C+ K + L +M G +P+ + L+ G+ E
Sbjct: 398 RMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEG 457
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
KF +N+ E+ G S L+ LC E R A L+ S+ G + Y
Sbjct: 458 KFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYN 517
Query: 335 GLVEKLCGEGNAGIAL----EVVD-------------------------------ELWKK 359
L++ C AL E+VD E+
Sbjct: 518 ELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVAS 577
Query: 360 GNLPSVIACTTLIEGLRR----------------------------LRKGVEASG----- 386
G LP + C L G R L + A G
Sbjct: 578 GXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARS 637
Query: 387 --LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ + MLK G+LP+ +T +++ L R A ++
Sbjct: 638 LEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSASLMK 676
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 2/316 (0%)
Query: 175 LAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E ++ L++ P+ IYN LING+ + E + A + +M +KPD +T+N LI
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 417
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ ++ A L EM++ G NP V +FNTLI + + ++ + EM E G +
Sbjct: 418 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ V+ +V+ C G++ +A ++ D + VLP Y +++ G A +
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 537
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
V+++ G PS++ LI+GL + EA ++ + ++PD+V++N L+ C
Sbjct: 538 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 597
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A L+ G+ TYH L+SG R E E L +M+ +P A
Sbjct: 598 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 657
Query: 473 YNSYMDGLSNARKSVR 488
+N ++ S ++
Sbjct: 658 HNIMVEAYSKYGNEIK 673
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 150/330 (45%), Gaps = 36/330 (10%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP-DVVTFNILISGFCRNKKFDLA 244
RP +N + V + +A+G RM RD P + ++N++I+G R + A
Sbjct: 160 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 219
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ +F EM E+ PN +++NT+I G + G + +M+ G + +++T +L+ G
Sbjct: 220 VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSG 279
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDY-------------------FG---------- 335
LC GR+ + L+ + + + ++P F Y FG
Sbjct: 280 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG 339
Query: 336 ------LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
L+ LC +G IA EV+ L G +P+ + TLI G + + A
Sbjct: 340 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 399
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M I PD +T+N L+ LC R +A L + G++P T++ L+ Y R
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++ +++EM + G P++ +Y S ++
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNA 489
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N KA R+ + A + + ++ D P+V +N LI+ + + + +K
Sbjct: 413 YNALINGLCKAERITN---AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLS 469
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KP+VV++ +++ FC+N K A+ + +M K PN +N +I +
Sbjct: 470 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 529
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G S VT +L+ GLCN+ ++ +A E++ S ++P Y
Sbjct: 530 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 589
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C GN AL++ + K G +V LI GL + E L +KM++
Sbjct: 590 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 649
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++P + N ++E G + A+ LR
Sbjct: 650 NVVPSNAIHNIMVEAYSKYGNEIKAEDLR 678
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+NG K + A +V + P V +N LI+G+C+ + + A F +M+
Sbjct: 344 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 403
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ P+ +++N LI G + ++ EM + G + T L+D G++ K
Sbjct: 404 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 463
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
++ + G+ P Y +V C G A+ ++D+++ K LP+ +I+
Sbjct: 464 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+A L+EKM GI P VT+N L++ LC+ + +A+ + S L P
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D ++Y+ L+S + +L M G + TY+ + GL A +
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGR 635
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 141/324 (43%), Gaps = 35/324 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF------------------ 228
+P+ YNVL++G + + D M ++ PD T+
Sbjct: 267 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 326
Query: 229 -----------------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+IL++G C++ K +A + + + G P V +NTLI G+
Sbjct: 327 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 386
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + +M + +T L++GLC R+ A +L+++ GV P
Sbjct: 387 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 446
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L++ G V+ E+ + G P+V++ +++ + K EA +++ M
Sbjct: 447 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 506
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +LP++ +N +++ + G A L + G+ P +TY++L+ G +++
Sbjct: 507 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 566
Query: 452 KEGENLVNEMLDEGFIPDLATYNS 475
E E ++N + + IPD +YN+
Sbjct: 567 SEAEEIINSLSNHRLIPDAVSYNT 590
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
DH T+ ++ L + R + +L + N P +E F+ ++A+ +
Sbjct: 409 DHITYNALINGLCKAERITNAQDLLMEMQDNGVN---------PTVE-TFNTLIDAYGRT 458
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ + M++ +G +P+V Y ++N F K + +A+ D M V P+
Sbjct: 459 GQLEKCFIVLSEMQE--NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 516
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N +I + + D A L +M+ G +P++V++N LI+G + + E + +
Sbjct: 517 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 576
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+V+ L+ C G + KA +L + G+ Y L+ L G G
Sbjct: 577 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 636
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+ ++ + +PS ++E + ++A L ++ML++
Sbjct: 637 NEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++ + + + M D P+ +YN +I+ +V+ D+A ++M +
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P +VT+N+LI G C + A + + P+ VS+NTLI D+ +
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M + G + + T L+ GL GR+ + L + V+P + + +VE
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665
Query: 341 CGEGNAGIALEVVDELWKKGN 361
GN A ++ E+ +K N
Sbjct: 666 SKYGNEIKAEDLRKEMLQKRN 686
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML ++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 151/295 (51%), Gaps = 2/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN L++G + DKA+ +RMV ++ P+ +TF L+ GF ++ + + +
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 337
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EKG N S+++LI G F E K + G+ + EM+E GC+ +++ L+DGLC
Sbjct: 338 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 397
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG+ +A E +I+ +G P F Y L+ G+ A+ V E+ +
Sbjct: 398 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVC 457
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+ LI GL + K EA + ++ML GI D V ++ ++ C+ +L ++L
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L PD +TY+IL++ + +N +++N MLD+G PD T + ++ L
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 7/331 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK---LIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
F+ + A + ++ + F M + DG Y+ L++G D+A+
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGY----TYSTLMHGLCNEGRIDEAVSLL 233
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M + P+ V FN+LIS C+ A L M KGC PN V++N+L+ G +
Sbjct: 234 DEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLK 293
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K D+ +++ M+ C + +T LVDG GR L +++ +G +F Y
Sbjct: 294 GKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSY 353
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ L EG +++ E+ +KG P+ I + LI+GL R K EA + +M
Sbjct: 354 SSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKN 413
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G P+S T++ L+ + G A + + + + Y IL++G + + KE
Sbjct: 414 KGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKE 473
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ +ML G D+ Y+S + G NA+
Sbjct: 474 ALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQ 504
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 5/296 (1%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++ + K KAL + RM + K V +FN +++ + FDLAL + + +
Sbjct: 105 IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVID 164
Query: 254 KGC----NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
PN +SFN +I+ D+ V + M + C T L+ GLCNEG
Sbjct: 165 SNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEG 224
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
R+ +A L+ + G P + L+ LC +G+ A ++VD ++ KG +P+ +
Sbjct: 225 RIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYN 284
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+L+ GL K +A L+ +M+ +P+ +TF L++ GR +D R+ + K
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G + +Y L+SG +E + + G L EM+++G P+ Y++ +DGL K
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 400
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 159/388 (40%), Gaps = 34/388 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ T+ +V L + + S+LN + AN C ND F V+ FVK
Sbjct: 279 NEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC-VPNDITFGT---------LVDGFVKH 328
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R DG+ ++ + R + Y+ LI+G K + + + + MV KP+ +
Sbjct: 329 GRALDGVRVLVSLEEK-GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIV 387
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++ LI G CR K D A EM+ KG PN ++++L+ G+F + + + EM
Sbjct: 388 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 447
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ C V IL++GLC G++ +A + RG+ Y ++ C
Sbjct: 448 DNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 507
Query: 348 IALEVVDELWKKGN--LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+++ +++ P V+ L+ A ++ ML +G PD +T +
Sbjct: 508 QGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDI 567
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDP--DGMTY-HILVSGYTRENRRKEGENLVNEML 462
L+ L D +DP DG + LV + R N++ ML
Sbjct: 568 FLKTLRD-----------------NMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVML 610
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ +P +T+ + L K VR+T
Sbjct: 611 QKFLLPKPSTWALAVQQLCKPMK-VRKT 637
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 9/344 (2%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-----RPSVSIYNVLINGFVKCRE 205
P R F+ +N +A + LA ++ RP + Y++L F +
Sbjct: 46 PASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGR 105
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG-LFREMREKGCNPNVVSFN 264
+ + +++ + + V N L++G C K+ D A+ L R M E GC PNVVS N
Sbjct: 106 IEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCN 165
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELG---CEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
TL++G E++ +E + + + M E G C + VT ++DGLC V +A ++
Sbjct: 166 TLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHM 225
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
+GV Y +++ LC A V+ + KG P V+ T+I+GL + +
Sbjct: 226 IDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 285
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
A G+++ M+ +G+ PD VT+N +++ LC AD + K + PD TY+ L
Sbjct: 286 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCL 345
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GY KE + EM G PD+ TY+ +D L K
Sbjct: 346 IHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 9/329 (2%)
Query: 172 DGLLAFEA-------MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
DGL +A ++ +ID +P V YN +I+G K + D+A G M+ VK
Sbjct: 242 DGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVK 301
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDVVT+N +I G C+ + D A G+ + M +K P++ ++N LI G+ ++ E V
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRR 361
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM G + VT +L+D LC G+ +A ++ R+G+ P Y L+
Sbjct: 362 LEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA 421
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G +++D + G P+ ++ + EA + +M + G+ PD VT
Sbjct: 422 RGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVT 481
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L++ LC +GR DA G+ P+ + ++ LV G +R ++ E L EM
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
D+G P++ +N+ M L N + + R
Sbjct: 542 DQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 6/335 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG-FYDR 215
+ F + R+ G AF + K R + + N L+NG + D+A+ R
Sbjct: 93 YSILTGCFCRLGRIEHGFAAFGLILK-TGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG---CNPNVVSFNTLIRGFFG 272
M P+VV+ N L+ G C K+ + AL L M E G C PNVV++NT+I G
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ D + MI+ G + VT ++DGLC V +A ++ +GV P
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +++ LC A V+ + KG P V+ T+I+GL + + A G+++ M+
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ + PD T+NCL+ G + R +GLDPD +TY +L+ + +
Sbjct: 332 DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCT 391
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
E + M+ +G P++ Y + G + AR ++
Sbjct: 392 EARKIFYCMIRKGIKPNVTIYGILLHGYA-ARGAI 425
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +I+G K + D+A G M+ VK DVVT++ +I G C+ + D A G+
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGV 256
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M +KG P+VV++NT+I G + D + MI+ G + VT ++DGLC
Sbjct: 257 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V +A ++ + V P Y L+ G + ++E++ +G P V+
Sbjct: 317 AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT 376
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ L++ L + K EA + M+++GI P+ + LL G D L L
Sbjct: 377 YSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMV 436
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G+ P+ ++I++ Y ++ E ++ + M G PD+ TY +D L
Sbjct: 437 ANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V+IY +L++G+ D MV + + P+ FNI++ + + D A+
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M + G +P+VV++ LI + D+ V +MI G +SV LV GLC
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
R KA EL + +GV P + ++ LC EG +A ++D + + G P+VI
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVI 585
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ TLI G + EA+ L++ M+ G+ PD ++++ LL C GR +A L
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG+ P +TY ++ G R E + L M+ G D+ TYN ++GL
Sbjct: 646 LRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 164/345 (47%), Gaps = 14/345 (4%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLL--------AFEAMRKLID------GRPSVSIYNV 195
C E +IF+ + +K N G+L A + L+D P+ I+N+
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++ + K D+A+ + RM + + PDVVT+ ILI C+ + D A+ F +M G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
PN V FN+L+ G ++++ + +EM + G + V ++ LCNEG+V+ A
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQ 569
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L+ R GV P Y L+ C G A +++D + G P +I+ TL+ G
Sbjct: 570 RLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGY 629
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ + A L +ML++G+ P +VT++ +L+ L R +A L L G D
Sbjct: 630 CKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDI 689
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+I+++G + N E + + + P++ T+ +D L
Sbjct: 690 YTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVL 734
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 166/352 (47%), Gaps = 54/352 (15%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID-----GRP-SVSIYNVLINGFVKC 203
C E+ER+ A+R G L + KL D RP SV +N L+N +
Sbjct: 12 CLELERVI---------ADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARA 62
Query: 204 R---EFDKALGFYDRMVR---DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
R + A+ ++RM R ++V+PD+ T++IL FCR + + F + + G
Sbjct: 63 RCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWR 122
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
N V N L+ G ++ DE +++ M E GC + V+C L+ GLCNE RV +A E
Sbjct: 123 VNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALE 182
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
L+ + +D G GN P+V+ T+I+GL
Sbjct: 183 LL------HTMAED-----------GGGNC---------------TPNVVTYNTIIDGLC 210
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ + A G+++ M+ +G+ D VT++ +++ LC A+ + KG+ PD +
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
TY+ ++ G + E ++ M+D+G PD+ TYN+ +DGL A+ R
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 322
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 13/372 (3%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T + ++ A+ ++L +L+ + AN +N IF+ + A+ K
Sbjct: 410 TIYGILLHGYAARGAIADLTDLLDLMVANGISPNN----------YIFNIVLCAYAKKAM 459
Query: 170 MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+++ + F M + G P V Y +LI+ K D A+ +++M+ D V P+ V F
Sbjct: 460 IDEAMHIFSRMSQ--HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVF 517
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N L+ G C +++ A LF EM ++G PNVV FNT++ E + + M
Sbjct: 518 NSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMER 577
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+G + ++ L+ G C GR +A +L+ G+ P Y L+ C G
Sbjct: 578 VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A + E+ +KG P + +T+++GL R+ EA L M+K G D T+N +L
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILN 697
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC +A ++ +K L P+ +T+ I++ + R+K+ +L + G +P
Sbjct: 698 GLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVP 757
Query: 469 DLATYNSYMDGL 480
++ TY M +
Sbjct: 758 NVVTYCIMMKNI 769
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 44/365 (12%)
Query: 165 VKANRMNDGLLAFEA-------MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDR 215
V N + DGL +A ++ +ID +P + YN LI+G++ E+ + + +
Sbjct: 305 VTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEE 364
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG--- 272
M + PDVVT+++L+ C+N K A +F M KG PNV + L+ G+
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424
Query: 273 --------------------------------ERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+ DE +++ M + G VT I
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+D LC GRV A GV P + LV LC A E+ E+W +G
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+V+ T++ L + + A L++ M + G+ P+ +++N L+ C GRT +A
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+L + + GL PD ++Y L+ GY + R L EML +G P TY++ + GL
Sbjct: 605 QLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGL 664
Query: 481 SNARK 485
+ R+
Sbjct: 665 FHTRR 669
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 3/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++A K R++D +L F M + DG P+ ++N L+ G ++KA +
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQM--INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M V+P+VV FN ++ C + +A L M G PNV+S+NTLI G +
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + M+ +G + ++ + L+ G C GR+ A L + R+GV P Y
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ L A E+ + K G + ++ GL + EA + + + +
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ +TF +++ L GR DA L + GL P+ +TY I++ +E E +
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
NL M G PD N+ + L
Sbjct: 780 NLFLAMEKSGCTPDSVMLNAIIRSL 804
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 12/301 (3%)
Query: 165 VKANRMNDGLLAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ N N+G + ++LID RP+V YN LI G D+A D MV
Sbjct: 555 IMCNLCNEGQVMVA--QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD+++++ L+ G+C+ + D A LFREM KG P V+++T+++G F R+F E
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ MI+ G ++ T I+++GLC V +A ++ + + P + +++
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGI 396
L G A+++ + G +P+V+ +++ + +++G+ E L M K G
Sbjct: 733 VLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI--IQEGLLDEFDNLFLAMEKSGC 790
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PDSV N ++ L G + A + T +L+S ++RE + ++
Sbjct: 791 TPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKS 850
Query: 457 L 457
L
Sbjct: 851 L 851
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 163 AFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
+ K R+++ F E +RK + P Y+ ++ G R F +A Y M++
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGV--TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ T+NI+++G C+ D A +F+ + K PN+++F +I F + + ++
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ + G + VT I++ + EG + + L + + G P ++ L
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805
Query: 342 GEGN---AGIALEVVDEL 356
G G AG L +DE+
Sbjct: 806 GRGEIMRAGAYLSKIDEM 823
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 110 TTFLFIVRSLASSYRFSELHSV-LNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
T+ I++ L + RFSE + LN I + I++ ++ +N K N
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSG----QQWDIYT-------YNIILNGLCKTN 703
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+++ F+++ D RP++ + ++I+ K A+ + + + P+VVT+
Sbjct: 704 CVDEAFKIFQSLCSK-DLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
I++ + D LF M + GC P+ V N +IR G
Sbjct: 763 CIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLG 806
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ + L+ R ++ + F +M + D+ +F ILI FCR + AL +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+F +L+ GF + + ++ M++ G E + V L+DGLC
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A EL+ + ++G+ Y L+ LC G A ++ ++ K+ P V+
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ + EA L ++M++ + P++VT+N ++ LC GR DA + L +
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG P+ +TY+ L+SG+ + EG L M EGF D+ TYN+ + G K
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ F + +R++ L M KL PS+ + L++GF A M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ +P+VV +N LI G C+N + ++AL L EM +KG +VV++NTL+ G ++
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M +M++ VT L+D +G + +A EL + + V P + Y +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A + D + KG P+V+ TLI G + R E L ++M EG
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D T+N L+ C VG+ A + ++ + PD +T+ IL+ G +
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++M + + YN + GL A K
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 40/368 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F NR+ D AF + ++ P+V +YN LI+G K E + AL +
Sbjct: 144 FGSLLHGFCLVNRIGD---AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + + DVVT+N L++G C + ++ A + R+M ++ NP+VV+F LI F +
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + EMI+ + ++VT +++GLC GR+ A + + +G P Y
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C +++ + +G + TLI G ++ K A + M+
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 395 GILPDSVT-----------------------------------FNCLLEDLCDVGRTVDA 419
+ PD +T +N ++ LC + A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L +G+ PD TY I++ G + R+E + L+ M +EG I + + +++
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEE 500
Query: 480 LSNARKSV 487
S++ K +
Sbjct: 501 HSSSNKEI 508
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 209/462 (45%), Gaps = 40/462 (8%)
Query: 46 PTAHHTHLL----RFLKTHLLTP----TNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFA 97
P+ HH + LK++ +TP +++P ++ + + Q IF
Sbjct: 68 PSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQ-----QNLDLALQIFD 122
Query: 98 WASTID-SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS---------NDGI 147
A +F H++ T+L ++ L+ + F + ++++ + + C N G
Sbjct: 123 HAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGF 182
Query: 148 FSCPEME----------------RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS 191
P++ R F+ +N V+ R + L F+ RK P+V
Sbjct: 183 AGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVF 242
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
N+L+ K + D A+ + M P+VVT+ ++ G+ A +F E+
Sbjct: 243 TCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEI 302
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++G P+ ++ L+ G+ + +F + V + EM E E + VT ++++ C E +
Sbjct: 303 LDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKS 362
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ L+ D + +P +++ LC EG +A E+ +L KK P +TL
Sbjct: 363 GEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTL 422
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I L + K EA L ++ ++G +P ++T+N L+ +C+ G +A RL KG
Sbjct: 423 IHWLCKEGKVWEARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGC 481
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
P+ TY++L+ G+ + +EG ++ EMLD G +P+ ATY
Sbjct: 482 VPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 34/293 (11%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +I K R F+ ++ + ++K F +I + + LA+ F +
Sbjct: 138 YLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIP 197
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G P+V SFNTL+ ++FD ++ L +
Sbjct: 198 SFGLQPSVRSFNTLLNTLVQNKRFD--------LVHL---------------------MF 228
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
K C + G++P F LV+ LC + + A+ V++E+ G +P+V+ TT++
Sbjct: 229 KNCR-----KKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G V A + ++L G +PD T+ L++ C GR +DA ++ ++
Sbjct: 284 GGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ +TY +++ Y +E + E NL+++ML++ +IP A +D L K
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGK 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
K G +P+V C L++ L + A ++E+M G +P+ VT+ +L G V
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A R+ +G PD TY IL+ GY ++ R + +++EM + P+ TY +
Sbjct: 294 GARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVII 353
Query: 478 DGLSNARKS 486
+ +KS
Sbjct: 354 EAYCKEKKS 362
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 2/313 (0%)
Query: 175 LAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L F + K+ + +PS+ +N LING +A+ D ++ +P V T +++
Sbjct: 157 LGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIV 216
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ K A+ ++M E C P VVS++ +I R +E V++ Y M +G
Sbjct: 217 NGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGIS 276
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L+ G+CN G+ +A L + + P + LV+ LC EG AL V
Sbjct: 277 PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSV 336
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + P ++ ++LI G+ + E+S L+ +ML I PD VTF+ ++ C
Sbjct: 337 FGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCK 396
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G +A + L +GL P+ +TY+ L+ GY ++ E + + M+++G PD+ +
Sbjct: 397 KGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456
Query: 473 YNSYMDGLSNARK 485
YN + G + +
Sbjct: 457 YNILIKGYCKSER 469
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +++ K +N+ + F MR I P+V YN LI G ++ +A + M
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRS-IGISPTVVTYNSLIYGMCNSGQWKQASILFKEM 305
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +KPDVVTF+IL+ C+ AL +F +M + P++V++++LI G +
Sbjct: 306 LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLW 365
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EM+ VT I VD C +G V +A ++ RG+ P Y L
Sbjct: 366 KESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSL 425
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C A +V D + KG P V++ LI+G + + EA L ++M +G+
Sbjct: 426 MDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGL 485
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+S+T L+ LC GR A L + G PD +TY L+SG+ + E
Sbjct: 486 TPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALA 545
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L + P+ + G+ A K
Sbjct: 546 LFEALKKSQLKPNHVICKILLGGMCKAGK 574
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 1/278 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V+A K + + L F M + I P + Y+ LI+G K + ++ + M
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQ-IAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM 375
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++PDVVTF+I + FC+ A + M E+G PNVV++N+L+ G+ +
Sbjct: 376 LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM 435
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + M+ GC ++ IL+ G C R+ +A +L + S +G+ P + L
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A E+ ++ G P +I +TL+ G + EA L E + K +
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQL 555
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
P+ V LL +C G+ DA L S + L PD
Sbjct: 556 KPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 1/308 (0%)
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+D L F M + + P ++ +N L+ V+ + +D + Y +M V V T I
Sbjct: 86 DDALAYFNQMVHM-NPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+ C L + ++ + G P++++FNTLI G E + E + ++ G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ + T ++V+GLC G+ A + P+ Y +++ LC A+
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
++ + G P+V+ +LI G+ + +AS L ++ML+ + PD VTF+ L++ L
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G ++A + ++PD +TY L+ G + + KE L+NEML PD+
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384
Query: 471 ATYNSYMD 478
T++ ++D
Sbjct: 385 VTFSIWVD 392
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 136/284 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V +++L++ K +AL + +M++ ++PD+VT++ LI G C++ + +
Sbjct: 311 KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESST 370
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM + P+VV+F+ + F + E ++ MIE G + VT L+DG C
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYC 430
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++ +A ++ +G P Y L++ C A ++ DE+ KG P+ I
Sbjct: 431 LHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI 490
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TTLI GL + + A L +KM G PD +T++ LL C G +A L
Sbjct: 491 THTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
L P+ + IL+ G + + ++ + L + + E PD+
Sbjct: 551 KKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
SV T LI L L ++ K+ K G P +TFN L+ LC GR V+A
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQL 197
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++G P T+ ++V+G + + + +M++ P++ +Y+ +D L
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Query: 484 R 484
R
Sbjct: 258 R 258
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 136/288 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V Y +L+NG K ++A M + + V +N LI CR +K +AL
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM KGC P++ ++N+LI G + DE + + M+ G ++VT L+ L
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G KA LV D RG Y GL++ C GN LE+ +++ G I
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI 601
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+C +I GL ++ K A + + G +PD VT+N +L LC VGR +A L
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+G+ PD TY+ +S +E + + ++ GF+P T+N
Sbjct: 662 QVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDR-MVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ +I N LING+V + +A F + M+ +PD+ T+NIL+ G C+ A
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM +GC PNV+++ L+ G +E + +EM G +SV L+ LC
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +V A L+ + +G P F Y L+ LC A + + G + + +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI L R +A L+ ML G D +T+N L++ C VG L
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL D ++ +I+++G + + + + ++ GF+PD+ TYNS ++GL
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 1/305 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ VN KA + + L M SV IYN LI + + AL M
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSV-IYNCLICALCRKEKVHVALNLLSEM 486
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPD+ T+N LI G C+ + D A LF M G N V++NTLI F
Sbjct: 487 CTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAF 546
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + +M+ GC +T L+ C G + K EL G+ +
Sbjct: 547 QKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIM 606
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A E + + +G +P ++ +++ GL ++ + EA L +++ EG+
Sbjct: 607 INGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+ T+N + C G DA G P +T+++LV +++ ++
Sbjct: 667 RPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFF 726
Query: 457 LVNEM 461
+++E+
Sbjct: 727 VLDEL 731
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 148/335 (44%), Gaps = 9/335 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV--KCREFDKALG 211
E IF + + KA + + MR + P+ Y++++ V C + +
Sbjct: 147 ESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNV- 205
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
FYD M+ V P V TF I++ C + D A L R+M + GC PN + + TLI
Sbjct: 206 FYD-MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + E + + EM +GC T ++ GLC ++ A +LV RG P +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA-SGLMEK 390
Y L+ LC G A +++ ++ P+ TLI G + EA S L E
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLKEAQSFLNET 380
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+ G PD T+N L+ LC G A L S +G +P+ +TY ILV+G +
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+E +++EM G + YN + L K
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI F K +K L Y++M+ D + D ++ NI+I+G C+ K D A R+
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G P++V++N+++ G + E +N+ + G + T + C EG V
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
AC G +P + + LV L + N V+DELW
Sbjct: 688 DACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 10/255 (3%)
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
R ++H LN +S +F+ ++ + K +R+++ F M L
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFT-------YNSLIYGLCKVDRIDEAFRLFHNM--L 522
Query: 184 IDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+DG + ++ YN LI+ ++ F KAL + M+ D +T+N LI FC+ +
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
L L+ +M G + +S N +I G K D + I G VT ++
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GLC GR+ +A L GV P F Y + C EG A + G +
Sbjct: 643 NGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFV 702
Query: 363 PSVIACTTLIEGLRR 377
PS + L+ L +
Sbjct: 703 PSNLTWNVLVYTLLK 717
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 192/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ + P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L D +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + DL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 286
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 161/325 (49%), Gaps = 13/325 (4%)
Query: 157 FHFAVNAFVK---ANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
F+ + F K ++MND L E +G P + YN LING+ A
Sbjct: 255 FNILTHLFCKDGDIDKMNDFLEKMEE-----EGFEPDIVTYNTLINGYCGRGRLSDAFYL 309
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y M R V PD+V++ L++G C+ + A L M +G NP+VVS+NTLI G+
Sbjct: 310 YRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCK 369
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV--LPKD 330
E K E ++ YEMI G S TC +L+ G EG ++ A LV++ + GV P
Sbjct: 370 EGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDI 429
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+DY LV LC E A +++ + ++G +P V LIE L + +A L +
Sbjct: 430 YDY--LVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAE 487
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
++ I P+ +T+ L+ LC +GR+++A++L GL PD ++ GY RE
Sbjct: 488 IVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKD 547
Query: 451 RKEGENLVNEMLDEGFIPDLATYNS 475
+ E+L+ E I D +Y++
Sbjct: 548 AGKAESLLVLFAKEFQIFDSESYST 572
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 171/422 (40%), Gaps = 54/422 (12%)
Query: 61 LLTPTNNQITPSSLLHFLKSKLHHHPQFTHY--DFHIFAWASTIDSFRHDHTTFLFIVRS 118
LL ++ ++ + +++K+ L P +Y H+ AW+ + T + +V+
Sbjct: 103 LLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKD 162
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
V + C+ D I IF + A+VKA + +G F
Sbjct: 163 TD--------EDVFQCLFLCCQDCNWDPI--------IFDLLLKAYVKAGMIKEGFRTFM 206
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
+ + + PSV N L+NG +K Y M R V P+ TFNIL FC++
Sbjct: 207 QILE-VGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKD 265
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D +M E+G P++V++NTLI
Sbjct: 266 GDIDKMNDFLEKMEEEGFEPDIVTYNTLI------------------------------- 294
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+G C GR+ A L RR VLP Y L+ LC EG A +++ +
Sbjct: 295 ----NGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVH 350
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G P V++ TLI G + K +E+ L+ +M+ GI PDS T L++ G +
Sbjct: 351 RGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLIS 410
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A L + G+ Y LV+ E+R + L+ M G+IP + YN ++
Sbjct: 411 ALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIE 470
Query: 479 GL 480
L
Sbjct: 471 SL 472
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 147/332 (44%), Gaps = 6/332 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N + R++D + M R+ + P + Y L+NG K +A R
Sbjct: 290 YNTLINGYCGRGRLSDAFYLYRIMYRRCV--LPDLVSYTALMNGLCKEGRVREAHQLLHR 347
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + PDVV++N LI G+C+ K + L EM G P+ + LI+G+ E
Sbjct: 348 MVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGW 407
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+N+ E+ + G S + LV LC E R A L+ S+RG +P Y
Sbjct: 408 LISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNK 467
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+E LC AL + E+ P+++ LI L R+ + +EA LME+ML G
Sbjct: 468 LIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFG 527
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD ++ C A+ L +L + + D +Y LV + +
Sbjct: 528 LQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFM 587
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L ML GF P+ T +DGL RK+V
Sbjct: 588 ELQERMLKVGFAPNSLTCKYMIDGL---RKNV 616
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 182/406 (44%), Gaps = 33/406 (8%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
I + T S +HT +V S +SS L ++ N +N SN PE +
Sbjct: 8 ILKISKTFASNAQNHTLTKNLVPSSSSS-----LQTIQN---SNSISLSNPLYSFLPENQ 59
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR-EFDKALG 211
+F + + +K + LL + ++ LI + I VL+ +C+ + AL
Sbjct: 60 NPNNFVNLIYSSLKRDNTQLTLLQNDDIKGLIHHLGANEISRVLL----RCQSDSVSALT 115
Query: 212 FYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMRE----------------- 253
F++ + D +KP + + +++ +K+F+ A+ E+
Sbjct: 116 FFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCC 175
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ CN + + F+ L++ + EG +++E+G S + C L++GL +
Sbjct: 176 QDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHL 235
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
+ + R GV+P + + L C +G+ + ++++ ++G P ++ TLI
Sbjct: 236 CWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLIN 295
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + +A L M + +LPD V++ L+ LC GR +A +L +GL+P
Sbjct: 296 GYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNP 355
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D ++Y+ L+ GY +E + E ++L+ EM+ G PD T + G
Sbjct: 356 DVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQG 401
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K+ R N+ + M + +P+V +Y LI+GF++ D+A MV
Sbjct: 299 INGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+P+ +T++ L+ G C+ + D A L ++M P+ +++N +I G F +
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G + T I++ GLC G KA +L+ + + +G+ P F Y L+
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 477
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EGN +A E+ D++ K LP + +LI GL ++ + E++ +M + G+LP+
Sbjct: 478 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 537
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T++ L+ G A++L GL P+ + Y L+ Y + + ++ +
Sbjct: 538 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 597
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
MLD+G + D Y + LS++
Sbjct: 598 MLDQGVMLDNRIYGILIHNLSSS 620
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 143/312 (45%)
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
+++ ++G + + + + K REFD A M + VT+N+LI+G CR+
Sbjct: 212 LQRAVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 271
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ A G ++M + G P+ ++ LI G R+ +E + EM + + V
Sbjct: 272 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 331
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+DG EG +A +++ + GV P Y LV LC G A ++ ++ +
Sbjct: 332 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD 391
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ P I +IEG R +A L+ +M GI P+ T++ ++ LC G A
Sbjct: 392 SHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 451
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L +TKGL P+ Y L+SGY RE + ++M +PDL YNS + G
Sbjct: 452 SDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFG 511
Query: 480 LSNARKSVRQTR 491
LS + T+
Sbjct: 512 LSKVGRVEESTK 523
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 149/349 (42%), Gaps = 36/349 (10%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
A+ A+ K + MR+ G +V+ YNVLI G + ++A GF M
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVT-YNVLIAGLCRSGAVEEAFGFKKDMEDY 286
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD T+ LI+G C++++ + A L EM PNVV + LI GF E DE
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR---------------- 323
M EM+ G + + +T + LV GLC G++ +A L+ R
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 406
Query: 324 -------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G+ P + Y ++ LC G A ++++E+ KG P+
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
LI G R A + +KM K +LPD +N L+ L VGR ++ +
Sbjct: 467 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 526
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+GL P+ TY L+ GY + + E LV MLD G P+ Y
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALG--FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+P+ +Y LI+G+ CRE + +L +D+M + V PD+ +N LI G + + + +
Sbjct: 464 KPNAFVYAPLISGY--CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
F +M+E+G PN +++ LI G+ + + M++ G + + V L++
Sbjct: 522 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 581
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+ K +GV+ + Y L+ L GN A V+ + K G++P
Sbjct: 582 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 641
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V ++LI GL + +A G++++M K+G+ P+ V +N L++ LC G A +
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KGL P+ +TY L+ G + L NEML G PD Y+ G S+A
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 2/303 (0%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F+ M K ++ P + YN LI G K +++ ++ +M + P+ T++ LI G+
Sbjct: 490 FDKMTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N + A L + M + G PN V + L+ +F ++ + M++ G +
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 608
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
IL+ L + G + A ++ + G +P Y L+ LC + A ++DE+
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
KKG P+++ LI+GL + A + +L +G++P+ VT+ L++ C VG
Sbjct: 669 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 728
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A L G+ PD Y +L +G + ++ L+ EM G ++++N+
Sbjct: 729 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNL 787
Query: 477 MDG 479
+DG
Sbjct: 788 VDG 790
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 36/270 (13%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
IY +LI+ + A + ++ PDV ++ LISG C+ + A G+ EM
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+KG +PN+V +N L +DGLC G +
Sbjct: 669 SKKGVDPNIVCYNAL-----------------------------------IDGLCKSGDI 693
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A + +G++P Y L++ C G+ A + +E+ G P + L
Sbjct: 694 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 753
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G +A L+E+M G S +FN L++ C G+ + +L + +GL
Sbjct: 754 TTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGL 812
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEM 461
P+ +T ++SG + + E + E+
Sbjct: 813 VPNALTIENIISGLSEAGKLSEVHTIFVEL 842
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y LI+G K + A Y+ M+ + PD +++L +G + A+ L
Sbjct: 710 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 769
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G + ++ SFN L+ GF K E + + + ++ G +++T E ++ GL
Sbjct: 770 IEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 828
Query: 308 EGRVLKA-------------------CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G++ + L +D +G +P D ++ C EGN
Sbjct: 829 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV-VDDMIRDHCKEGNLDK 887
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
AL + D + K + +++ L R K EA L+++M K G L
Sbjct: 888 ALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 936
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 20/202 (9%)
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
A + + E M + G S+S +N L++GF K + + L ++ + P+ +
Sbjct: 760 AGDLEQAMFLIEEM--FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 817
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T +ISG K +F E+++K F++L + K V
Sbjct: 818 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV------ 871
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ ++ C EG + KA L + Y +V+ LC +G
Sbjct: 872 -----------VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 920
Query: 347 GIALEVVDELWKKGNL-PSVIA 367
AL ++ E+ K+GNL P+++A
Sbjct: 921 SEALNLLKEMDKRGNLQPTLVA 942
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R D
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM+ G +SVT L+DG
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 239
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + + P Y L+ LC +G+ A ++DE+ KG P
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 299
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M++E D V + L+ LC G +VDA+++
Sbjct: 300 KITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLR 359
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL PD TY ++++ + ++ +G L+ EM +G +P + TYN M+G
Sbjct: 360 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 146/300 (48%), Gaps = 3/300 (1%)
Query: 147 IFSC--PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
I C P F+ ++ F K + F+A+ K RPSV YN L+NG+++
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKW-GLRPSVVSYNTLMNGYIRLG 174
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+ M+ V+PDV T+++LI+G C+ K D A LF EM KG PN V+F
Sbjct: 175 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFT 234
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI G + D + + +M+ +T L+ GLC +G + +A L+ + S +
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 294
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P Y L++ C +G+ A E + ++ + T LI GL R V+A
Sbjct: 295 GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDA 354
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
++ +ML G+ PD+ T+ ++ + C G +L G P +TY++L++G
Sbjct: 355 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ IA V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 131 LMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 190
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+ +T+ L+ G+ + R
Sbjct: 191 VQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAM 250
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + PDL TYN+ + GL
Sbjct: 251 EIYKQMLSQSLSPDLITYNTLIYGL 275
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 52 RSDLYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 108
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 109 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMN 168
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K +A+ L ++ML +G++P
Sbjct: 169 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVP 228
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+SVTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L+
Sbjct: 229 NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 288
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM +G PD TY + +DG
Sbjct: 289 DEMSMKGLKPDKITYTTLIDG 309
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 92 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAI 151
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 152 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 210
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ + + F M + P+V YN +I+G +D+A F ++
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEE-AGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEK 312
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV V+P ++T++IL+ G + K+ A + +EM EKG PNV+ +N LI
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M+ G +S T L+ G C G+ A L+ + G +
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC AL V E+ + P TTLI GL + K +A L K L +G
Sbjct: 433 VICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG 492
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
L D+ T N LL LC+ G+ + R++ +G D ++Y+ L+SG + E
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAF 552
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++EM+ +G PD TY+ + GL N K
Sbjct: 553 MFMDEMVKKGLKPDNYTYSILIRGLLNMNK 582
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 145/297 (48%), Gaps = 4/297 (1%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L+D + S N L++G + + ++ ++ D V++N LISG C NKK D
Sbjct: 494 LVDTKTS----NALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLD 549
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A EM +KG P+ +++ LIRG K +E + + G T +++
Sbjct: 550 EAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMI 609
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DG C R + +L + + P Y L+ C G +ALE+ +++ KG
Sbjct: 610 DGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGIS 669
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ T+LI+G+ + + EA L+E+M EG+ P+ + L++ +G+ V + L
Sbjct: 670 PNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 729
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+K + P+ +TY +++ GY R+ E L++EM ++G +PD TY ++ G
Sbjct: 730 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYG 786
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + N+L+ V+ EF K + +V V PDV F I+ FC+ K + A+ L
Sbjct: 216 PSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIEL 274
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M E G PNVV++NT+I G ++DE +M+E G E + +T ILV GL
Sbjct: 275 FSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTK 334
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ A ++ + + +G P Y L++ L G+ A+E+ D + KG +
Sbjct: 335 AKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSST 394
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L+++ML G + +F ++ LC A R
Sbjct: 395 YNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEML 454
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + P G L+SG + + + L + L++GF+ D T N+ + GL A K
Sbjct: 455 LRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGK 512
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRR-------------LRKGV------------ 382
+AL+V L KG PS C L+ L R + KGV
Sbjct: 201 LALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAIN 260
Query: 383 ---------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
EA L KM + G++P+ VT+N +++ L GR +A + +G++P
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY ILV G T+ R + ++ EM ++GF P++ YN+ +D L A
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEA 370
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ + A+ ++ R++ L E M+ K I P+ + Y LI G ++A +
Sbjct: 639 VYNHLIGAYCRSGRLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLLE 696
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++P+V + LI G+ + + L REM K +PN +++ +I G+ +
Sbjct: 697 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 756
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
E + +EM E G S+T + + G +G VL+A
Sbjct: 757 NVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQA 796
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 151/299 (50%), Gaps = 12/299 (4%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L++ VK R KA R + R PD VT+N L G+CR K AL + R+M
Sbjct: 178 LFNSLLDALVKSRHAGKAASLV-RALERRFPPDAVTYNTLADGWCRVKDTSRALDILRQM 236
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-----CEFSSVTCEILVDGLC 306
E G P ++N +++GFF + + +M + G C+ V+ ++ GL
Sbjct: 237 VESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLG 296
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ KA ++ + SR G P Y L++ C +GN A+ V D++ +KG +P+V+
Sbjct: 297 VAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVV 356
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T LI GL K A L++KM +EG P+ T+N L+ L + G A L
Sbjct: 357 TYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHL-FET 415
Query: 427 STKGLD--PDGMTYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYMDGL 480
+KG + P+ TY+I++S R ++ +V EM+D G++P +N ++GL
Sbjct: 416 MSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGL 474
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 11/257 (4%)
Query: 169 RMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR-----DRV 221
R+ D A + +R++++ P+ + YN+++ GF + + A F+ +M + +
Sbjct: 222 RVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENC 281
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
KPDVV++ ++ G + D A +F EM +GC P++ ++N LI+ + ++ V
Sbjct: 282 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVA 341
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ +MI G + VT +L+ GLC+ G++ +A +L+ R G P Y L+ L
Sbjct: 342 VFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLF 401
Query: 342 GEGNAGIALEVVDELWKKGN-LPSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEGIL 397
EG+ AL + + + K LP+ +I + +R A+ ++ +M+ G L
Sbjct: 402 EEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYL 461
Query: 398 PDSVTFNCLLEDLCDVG 414
P FN +L L G
Sbjct: 462 PRRFMFNRVLNGLMLTG 478
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 6/171 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ YN LI K + A+ +D M+R P+VVT+ +LI G C K D A+ L
Sbjct: 318 PSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKL 377
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGL 305
+M+ +GC PNV ++N LI F E ++ +++ +E + G C + T I++ +
Sbjct: 378 LDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHL-FETMSKGEECLPNQDTYNIIISAM 436
Query: 306 CNEGR---VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
R + A +V++ RG LP+ F + ++ L GN ++ E++
Sbjct: 437 FVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELL 487
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+D L KA LV RR P Y L + C + AL+++ ++ + G
Sbjct: 182 LLDALVKSRHAGKAASLVRALERR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESG 240
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG-----ILPDSVTFNCLLEDLCDVGR 415
P+ +++G R + A +M K G PD V++ +L L G+
Sbjct: 241 IAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQ 300
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A ++ S +G P TY+ L+ ++ ++ + ++M+ +G+IP++ TY
Sbjct: 301 LDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTV 360
Query: 476 YMDGLSNARKSVRQTR 491
+ GL +A K R +
Sbjct: 361 LIRGLCHAGKIDRAMK 376
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 7/357 (1%)
Query: 131 VLNFISANPCPCSNDGI------FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
VLN I C G+ F C ++ + A R D + M + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR-V 245
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P++ +N LI + F++ +M PD+ + +I G C+ ++A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M G PNVV +NT+++G ++ E + EM + C VT ILVD
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G V + EL+ G +P Y ++ C EG A+ ++ + G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ T +++GL + V+A LM +M+++G P+ VTFN L+ LC G A L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G PD ++Y ++ G + + +E L+N M+++G P+ Y+S LS
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL +S + C P++ R++ ++ K
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT---------PDI-RMYATIIDGICKEGH 301
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN ++ G + +A M + D VT
Sbjct: 302 LE---VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M GC P+V+++ T+I GF E DE V + M
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++V+ I++ GLC+ GR + A EL+ ++G P + L+ LC +G
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +GI P+++ ++ +
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + M+ G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 599 PNESTYTMLIKGLAS 613
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 30/403 (7%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIF 157
TF +VR L + R ++ VL+ +S C C + G + +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 158 H------------FAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKC 203
H +NA + +++ A +RKL + YN ++ G
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ + D MVR P++VTFN LI CRN F+ + +M E GC P++ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
T+I G E + + M G + + V ++ GLC+ R +A EL+ + +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ D + LV+ C G +E+++++ G +P VI TT+I G + E
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L++ M G P++V++ +L+ LC GR VDA+ L +G P+ +T++ L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ ++ L+ +ML G PDL +Y++ +DGL A K+
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V R+ D L + M P +Y+V++ + F ++ + M
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEM-SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D N++++ C D A+GL R++ GC ++VS+N +++G +++
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ + C + VT L+ LC G + E++ S G P Y +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ +C EG+ +A E+++ + G P+V+ T+++GL + EA L+ +M ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VTFN L++ C G L + G PD +TY +++G+ +E E
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+ M G P+ +Y + GL +A + V
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F K +++ ++ ++M +P+ Y +++ G + A +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSS-CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ VTFN LI+ C+ + A+ L ++M GC+P+++S++T+I G K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + M+ G +++ + L EGRV K ++ + + Y +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + G +P+ T LI+GL EA L+ ++ G
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632
Query: 397 L 397
L
Sbjct: 633 L 633
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ + ++ +++ L S+ R+ + +++ + CP F+ +N
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ----------GCPPNPVTFNTLINFLC 472
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + + M L++G P + Y+ +I+G K + ++AL + MV + P+
Sbjct: 473 KKGLVEQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++ + R + + + +F +++ + V +N +I + D ++
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGL 336
M+ GC + T +L+ GL +EG +A EL+ + RG L K +FG+
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 159/362 (43%), Gaps = 37/362 (10%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+I+ ++ F K + ++ L FE MR + RP V Y LI G K D+A FY
Sbjct: 266 KIYTMIISLFFKLDNVHGALSLFEEMRYMY-CRPDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ KPD V N +I+ + + D L LF EM C PNVV++NT+I+ F +
Sbjct: 325 EMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESK 384
Query: 275 -KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E + M G S T IL+DG C R+ KA L+ + +G P Y
Sbjct: 385 SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 334 FGLVEKL-------------------CGEGNAGI----------------ALEVVDELWK 358
L++ L CG +A + A+ + DE+ K
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+V A L+ GL R EA M KM + G LPD ++N +L L G
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + + PD ++Y+ ++S + +E L+ EM GF DL TY+S ++
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
Query: 479 GL 480
+
Sbjct: 625 AI 626
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 188/497 (37%), Gaps = 50/497 (10%)
Query: 27 PLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLL---HFLKSKLH 83
P P + P T + +R LK P + +L H+L ++
Sbjct: 38 PSPRNEDAVAALSPRYTNSVRVLDERFIRILKIFKWGPDAERALEVLMLRVDHWLVREVM 97
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS 143
+ F WA+ +++HD +T++ ++ L ++ E+ ++ + +P C
Sbjct: 98 KTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPI-C- 155
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
+ + E+ ++ NA +M + K +P+ YN +I +
Sbjct: 156 ---VVTPMELSQVIRMLGNA-----KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHE 207
Query: 204 REFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+++K Y+ M + PD VT++ LIS FC+ + D A+ L EM+E G P
Sbjct: 208 GQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ +I FF +++ EM + C T L+ GL GR+ +A +
Sbjct: 268 YTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
R P ++ L G L++ +E+ +P+V+ T+I+ L + V
Sbjct: 328 REDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRV 387
Query: 383 -EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP-------- 433
E E+M GI P T++ L++ C R A L KG P
Sbjct: 388 SEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSL 447
Query: 434 ---------------------------DGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
Y +++ + R + NL +EM G
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGC 507
Query: 467 IPDLATYNSYMDGLSNA 483
P++ YN+ M GL+ A
Sbjct: 508 TPNVYAYNALMSGLARA 524
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 3/223 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV-SIYNVLINGFVKCREFDKALGFYDR 215
+ ++ F K NR+ ++ E M + G P + Y LI+ K + +D A +
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDE--KGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + + ++I + + D A+ LF EM + GC PNV ++N L+ G
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACM 526
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + +M E GC + I+++GL G +A E++ + + P Y
Sbjct: 527 LDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
++ L G A E++ E+ G +I ++++E + ++
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 134/345 (38%), Gaps = 46/345 (13%)
Query: 153 MERIFHFAVNAFVKAN-RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
M R+ H+ V +K + +N + F K + + S Y LI+ C E + G
Sbjct: 85 MLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIH----CLELVEQYG 140
Query: 212 FYDRMVRDRVK-PDVVTFNILISGFCR----NKKFDLALGLFREMREKGCNPNVVSFNTL 266
+M+++ V+ P V + +S R K A+ +F +++ + C P ++N++
Sbjct: 141 EMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSM 200
Query: 267 IRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
I E ++++ + EM G C +VT L+ C GR A L+ + G
Sbjct: 201 IIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENG 260
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y ++ N AL + +E+ P V T LI GL + + EA
Sbjct: 261 MQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAY 320
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+M +E PD+V N ++ L GR D
Sbjct: 321 HFYHEMQREDCKPDTVVMNNMINFLGKAGRLDD--------------------------- 353
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
G L EM IP++ TYN+ + L ++ V +
Sbjct: 354 --------GLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R D
Sbjct: 118 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 177
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM+ G + VT L+DG
Sbjct: 178 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 237
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + + P Y L+ LC +G+ A ++DE+ K P
Sbjct: 238 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPD 297
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I TTLI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 298 KITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLR 357
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD TY ++++ + ++ +G L+ EM +G +P + TYN M+G
Sbjct: 358 EMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 157/385 (40%), Gaps = 44/385 (11%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER--------IFHFAVN 162
++ ++ L + SE S++ + + S +F+ + +F +
Sbjct: 2 SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + R+ P + VL +K + F GFY+ ++
Sbjct: 62 AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYEEILECGYP 120
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+ DEG +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ GV P + Y L+ LC
Sbjct: 181 KSAMLA-----------------------------------SGVQPDVYTYSVLINGLCK 205
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
E A E+ DE+ KG +P+ + TTLI+G + + A + ++ML + + PD +T
Sbjct: 206 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 265
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N L+ LC G A L S K L PD +TY L+ G +E M+
Sbjct: 266 YNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMI 325
Query: 463 DEGFIPDLATYNSYMDGLSNARKSV 487
E D Y + + GL +SV
Sbjct: 326 QENIRLDEVAYTALISGLCQEGRSV 350
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D A+ Y +
Sbjct: 196 YSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 253
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM K P+ +++ TLI G E
Sbjct: 254 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGD 313
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 314 LDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTM 373
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ +++ E+ + G++PSV+ L+ G
Sbjct: 374 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 2/316 (0%)
Query: 175 LAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E ++ L++ P+ IYN LING+ + E + A + +M +KPD +T+N LI
Sbjct: 354 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 413
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ ++ A L EM++ G NP V +FNTLI + + ++ + EM E G +
Sbjct: 414 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 473
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ V+ +V+ C G++ +A ++ D + VLP Y +++ G A +
Sbjct: 474 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 533
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
V+++ G PS++ LI+GL + EA ++ + ++PD+V++N L+ C
Sbjct: 534 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 593
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A L+ G+ TYH L+SG R E E L +M+ +P A
Sbjct: 594 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAI 653
Query: 473 YNSYMDGLSNARKSVR 488
+N ++ S ++
Sbjct: 654 HNIMVEAYSKYGNEIK 669
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 146/295 (49%), Gaps = 1/295 (0%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP-DVVTFNILISGFCRNKKFDLA 244
RP +N + V + +A+G RM RD P + ++N++I+G R + A
Sbjct: 156 ARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA 215
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ +F EM E+ PN +++NT+I G + G ++ +M+ G + +++T +L+ G
Sbjct: 216 VEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSG 275
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GR+ + L+ + + + ++P F Y L + L G++ L + + K G
Sbjct: 276 LCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIG 335
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
C+ L+ GL + K A +++ ++ G++P V +N L+ C G A
Sbjct: 336 DYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFG 395
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ + PD +TY+ L++G + R ++L+ EM D G P + T+N+ +D
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 450
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 5/269 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N KA R+ + A + + ++ D P+V +N LI+ + + + +K
Sbjct: 409 YNALINGLCKAERITN---AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLS 465
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KP+VV++ +++ FC+N K A+ + +M K PN +N +I +
Sbjct: 466 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 525
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G S VT +L+ GLCN+ ++ +A E++ S ++P Y
Sbjct: 526 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 585
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C GN AL++ + K G +V LI GL + +E L +KM++
Sbjct: 586 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQN 645
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++P + N ++E G + A+ LR
Sbjct: 646 NVVPSNAIHNIMVEAYSKYGNEIKAEDLR 674
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+NG K + A +V + P V +N LI+G+C+ + + A F +M+
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ P+ +++N LI G + ++ EM + G + T L+D G++ K
Sbjct: 400 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
++ + G+ P Y +V C G A+ ++D+++ K LP+ +I+
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+A L+EKM GI P VT+N L++ LC+ + +A+ + S L P
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D ++Y+ L+S + +L M G + TY+ + GL A +
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGR 631
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 142/326 (43%), Gaps = 35/326 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF------------------ 228
+P+ YNVL++G + + D M ++ PD T+
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 322
Query: 229 -----------------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+IL++G C++ K +A + + + G P V +NTLI G+
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 382
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + +M + +T L++GLC R+ A +L+++ GV P
Sbjct: 383 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 442
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L++ G V+ E+ + G P+V++ +++ + K EA +++ M
Sbjct: 443 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 502
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +LP++ +N +++ + G A L + G+ P +TY++L+ G +++
Sbjct: 503 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 562
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYM 477
E E ++N + + IPD +YN+ +
Sbjct: 563 SEAEEIINSLSNHRLIPDAVSYNTLI 588
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++ + + + M D P+ +YN +I+ +V+ D+A ++M +
Sbjct: 483 VNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P +VT+N+LI G C + A + + P+ VS+NTLI D+ +
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M + G + + T L+ GL GR+++ L + V+P + + +VE
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAY 661
Query: 341 CGEGNAGIALEVVDELWKKGN 361
GN A ++ E+ +K N
Sbjct: 662 SKYGNEIKAEDLRKEMLQKRN 682
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 126/289 (43%), Gaps = 15/289 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
DH T+ ++ L + R + +L + N P +E F+ ++A+ +
Sbjct: 405 DHITYNALINGLCKAERITNAQDLLMEMQDNGVN---------PTVE-TFNTLIDAYGRT 454
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ + M++ +G +P+V Y ++N F K + +A+ D M V P+
Sbjct: 455 GQLEKCFIVLSEMQE--NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 512
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N +I + + D A L +M+ G +P++V++N LI+G + + E + +
Sbjct: 513 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+V+ L+ C G + KA +L + G+ Y L+ L G G
Sbjct: 573 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 632
Query: 347 GIALEVVDELWKKGN-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
I +E + + + N +PS ++E + ++A L ++ML++
Sbjct: 633 -IEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 10/309 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YNVL+ C + + R+ R+ KPD ++N +I G CR + A +
Sbjct: 159 PTTATYNVLLKAH--CSDASAPIEDAVRLFRNIPKPDACSYNTVIDGLCRRSRRADAQEI 216
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM G P VV++ T+I + D+ + M EM +G + VT L+DGLC
Sbjct: 217 FSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCK 276
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A EL+ ++ LP Y ++ LC E A+EV+D + +G P
Sbjct: 277 GGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGL 336
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF-------NCLLEDLCDVGRTVDAD 420
LI GL + VEA+ +++M+ G+ P+ VT+ + ++ LC G
Sbjct: 337 FGKLIVGLCGAGRAVEAANYLDEMVLSGVEPNRVTWSLHVRINDAVVTALCAKGEAGRTF 396
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R+ T+G+ + T+H+LV ++++N ++ ++V +ML E IP+ T++ +
Sbjct: 397 RVYQSMRTRGISTEPGTFHLLVEFFSKKNDLEKAAHVVLDMLSEKCIPERETWDIILTRY 456
Query: 481 SNARKSVRQ 489
+ +K VRQ
Sbjct: 457 WS-KKKVRQ 464
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 140/298 (46%), Gaps = 12/298 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN+L++G K A M R+ V PD VT+ L+ G+C K D A L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM C PN + N L+ + + E + +M E G +VTC I+VDGLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + KA E+V G L GN+ I L V D L + LP +I
Sbjct: 479 SGELDKAIEIVKGMRVHGSAA-----------LGNLGNSYIGL-VDDSLIENNCLPDLIT 526
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TL+ GL + + EA L +M+ E + PDSV +N + C G+ A R+
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG TY+ L+ G +N+ E L++EM ++G P++ TYN+ + L K
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 160/360 (44%), Gaps = 40/360 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V+ F K+N ++ F+ +R + + +PSV +YN+L+ +K R + Y MV
Sbjct: 82 VSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLC 141
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P TFN+LI C + D A LF EM EKGC PN +F L+RG+ D+G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M G + V +V C EGR + ++V G++P + +
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 340 LCGEGNAGIALEV-----VDE-------------LWKKG--------------------- 360
LC EG A + +DE L KG
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+L S+ + ++GL R K +EA ++++M +GI P ++N L++ LC +G DA
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L G+ PD +TY L+ GY + ++L+ EM+ +P+ T N + L
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 30/350 (8%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I++ V++F + R +D E MR+ +G P + +N I+ K + A +
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMRE--EGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 215 RMVRDRV----KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M D +P+ +T+N+++ GFC+ + A LF +RE ++ S+N ++G
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
KF E + +M + G S + IL+DGLC G + A +V R GV P
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ C G A ++ E+ + LP+ C L+ L ++ + EA L+ K
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 391 MLKEGILPDSVTFNCLLEDLCDVG------RTVDADRLRLLASTKGLD------------ 432
M ++G D+VT N +++ LC G V R+ A+ L
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 433 -----PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
PD +TY L++G + R E +NL EM+ E PD YN ++
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ L+NG K F +A + M+ ++++PD V +NI I FC+ K A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M +KGC+ ++ ++N+LI G + + E + EM E G + T + LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV----VDELWKKGNLP 363
+V A L+ + ++ + P F + L+E C + +A EV V +K L
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL- 422
S++ L G + ++A+ L+E +L G + + L+E LC A +
Sbjct: 702 SLMFNELLAAG-----QLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGIL 756
Query: 423 -RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+++ G DP + ++ G + +KE + ++M++ + ++A
Sbjct: 757 HKMIDRGYGFDPAALM--PVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 34/315 (10%)
Query: 194 NVLINGFVKCREFDKALGFY-----------------------DRMVRDRVKPDVVTFNI 230
N++++G E DKA+ D ++ + PD++T++
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++G C+ +F A LF EM + P+ V++N I F + K + +M + G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C S T L+ GL + ++ + L+ + +G+ P Y ++ LC A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-----KEGILPDSVTFNC 405
++DE+ +K P+V + LIE ++ A + E + KEG+ S+ FN
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY--SLMFNE 707
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LL G+ + A L +G + Y LV +++ + ++++M+D G
Sbjct: 708 LLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 466 FIPDLATYNSYMDGL 480
+ D A +DGL
Sbjct: 764 YGFDPAALMPVIDGL 778
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 105/273 (38%), Gaps = 47/273 (17%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKAL-------- 210
+N KA R + F M KL +P YN+ I+ F K + A
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKL---QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 211 ---------------------------GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
G D M + P++ T+N I C +K +
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG---CEFSSVTCEI 300
A L EM +K PNV SF LI F FD MA E+ E C +
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFD----MAQEVFETAVSICGQKEGLYSL 703
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+ + L G++LKA EL+ RG F Y LVE LC + +A ++ ++ +G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
A +I+GL ++ EA+ +KM++
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L ++M ++G P+ TF L+ C G T L + G+ P+ + Y+ +VS
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ RE R + E +V +M +EG +PD+ T+NS + L K + +R
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 191/417 (45%), Gaps = 42/417 (10%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFH 158
FRH ++ ++ L + SE S++ + + S +F+ + I+
Sbjct: 1 FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYV 60
Query: 159 FA--VNAFVKANRMNDGL------------LAFEAMRKLID------------------- 185
F+ + A++++ D + + F+ RK+++
Sbjct: 61 FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120
Query: 186 --GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R D
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 180
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
L M G P+V +++ LI G E K D+ + EM+ G + VT L+
Sbjct: 181 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 240
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DG C GRV A E+ + +LP Y L+ LC +G+ A +++DE+ KG
Sbjct: 241 DGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 300
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P TTLI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 301 PDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 360
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L PD TY ++++ + ++ +G L+ EM +G P + TYN M+G
Sbjct: 361 LREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 134 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 193
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G + R
Sbjct: 194 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAM 253
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ ML + +PDL TYN+ + GL
Sbjct: 254 EIYKRMLSQSLLPDLITYNTLIYGL 278
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 95 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 154
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 155 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 213
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 203/448 (45%), Gaps = 40/448 (8%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSE 127
++P +L LKS+ + F +D A+ + H + I+R L+ + +
Sbjct: 7 SLSPKHVLKLLKSEKNPRAAFALFDS-----ATRHPGYAHSAVVYHHILRRLSEARMVTH 61
Query: 128 LHSVLNFISANPCPCSND--------------------------GIFSCPEMERIFHFAV 161
+ ++ I + C C D IF C R ++ +
Sbjct: 62 VGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLL 121
Query: 162 NAFVKANRMN--DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
NAFV+A + + L A+ + P++ YNVLI K +EF+KA GF + M ++
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVA---PNLQTYNVLIKMSCKKKEFEKARGFLNWMWKE 178
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
KPDV +++ +I+ + K D AL LF EM E+ P+V +N LI GF E+
Sbjct: 179 GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMA 238
Query: 280 VNMAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD-FDYFGLV 337
+ + +++E + +V T I++ GL GRV C + D ++ KD + Y L+
Sbjct: 239 MQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRV-DDCLKIWDRMKQNEREKDLYTYSSLI 297
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC EGN A V +EL ++ V+ T++ G R K ++ S + +++++
Sbjct: 298 HGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGK-IKESLELWRIMEQRNS 356
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
+ V++N L++ L + G+ +A + L KG D TY I + G + +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGV 416
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ E+ +G D+ Y S +D L R+
Sbjct: 417 MQEVESKGGHLDVYAYASIIDCLCKKRR 444
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 160/331 (48%), Gaps = 2/331 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + ++ K R++D L ++ M++ + + Y+ LI+G DKA ++
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWDRMKQ-NEREKDLYTYSSLIHGLCDEGNVDKAESVFN 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+V + DVVT+N ++ GFCR K +L L+R M ++ + N+VS+N LI+G
Sbjct: 315 ELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENG 373
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K DE + M G + T I + GLC G V KA ++ + +G + Y
Sbjct: 374 KIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYA 433
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ LC + A +V E+ K G + C LI GL R + +AS LM M K
Sbjct: 434 SIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKN 493
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LP V++N L+ LC+ G+ +A GL PD TY IL+ G R+ + +
Sbjct: 494 GCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELA 553
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L ++ L G PD+ +N + GL + K
Sbjct: 554 LELWHQFLQSGLEPDVMMHNILIHGLCSVGK 584
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYD 214
++ + F + ++ + L + ++++ R SV+I YN+LI G ++ + D+A +
Sbjct: 328 YNTMLGGFCRCGKIKESL----ELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M D T+ I I G C N + ALG+ +E+ KG + +V ++ ++I +R
Sbjct: 384 LMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKR 443
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E N+ EM + G E +S C L+ GL + R+ A L+ + G LP Y
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYN 503
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G G A V E+ + G P + + L+ GL R RK A L + L+
Sbjct: 504 ILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQS 563
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD + N L+ LC VG+ DA + + + +TY+ L+ GY +
Sbjct: 564 GLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRA 623
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ M G PD+ +YN+ + GL
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTILKGL 649
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
G V Y +I+ K R ++A M + V+ + N LI G R+ + A
Sbjct: 425 GHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDAS 484
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L R M + GC P VVS+N LI G KF E EM+E G + T IL+ GL
Sbjct: 485 LLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGL 544
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C + ++ A EL F + G+ P + L+ LC G A+ V+ + + ++
Sbjct: 545 CRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL 604
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ TL+EG ++R A+ + M K G+ PD +++N +L+ LC R A
Sbjct: 605 VTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDD 664
Query: 426 ASTKGLDPDGMTYHILV 442
A G+ P T++ILV
Sbjct: 665 ARNHGIFPTVYTWNILV 681
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ ++ +R++D L M K +G P+V YN+LI G + +F +A F M+ +
Sbjct: 471 IGGLIRDSRLSDASLLMRGMGK--NGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLEN 528
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+KPD+ T++IL+ G CR++K +LAL L+ + + G P+V+ N LI G K D+
Sbjct: 529 GLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M C + VT L++G +A + + G+ P Y +++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKG 648
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
LC A+E D+ G P+V L+ +
Sbjct: 649 LCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 147/312 (47%), Gaps = 14/312 (4%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A ++++ID PS+ YN+L++G K A M R+ V PD VT+ L+
Sbjct: 345 AETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLH 404
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+C K D A L +EM C PN + N L+ + + E + +M E G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGL 464
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+VTC I+VDGLC G + KA E+V G L GN+ I L V
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA-----------LGNLGNSYIGL-VD 512
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D L + LP +I +TL+ GL + + EA L +M+ E + PDS+ +N + C
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ A R+ KG TY+ L+ G +N+ E L++EM ++G P++ TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTY 632
Query: 474 NSYMDGLSNARK 485
N+ + L K
Sbjct: 633 NTAIQYLCEGGK 644
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 162/362 (44%), Gaps = 40/362 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V+ F K+N ++ F+ +R + + +P + +YNVL+ ++ R + Y MV
Sbjct: 82 VSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLC 141
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+ TFN+LI C + D A LF EM EKGC PN +F L+RG+ D+G
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M G + V +V C EGR + +LV G++P + +
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261
Query: 340 LCGEGNAGIALEV-----VDE-------------LWKKG--------------------- 360
LC EG A + +DE L KG
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+L S+ + ++GL R K +EA ++++M+ +GI P ++N L++ LC +G DA
Sbjct: 322 DLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L G+ PD +TY L+ GY + ++L+ EM+ +P+ T N + L
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 481 SN 482
N
Sbjct: 442 WN 443
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 30/350 (8%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
+++ V++F + R +D E MR+ +G P + +N I+ K + A +
Sbjct: 219 VYNTIVSSFCREGRNDDSEKLVEKMRE--EGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 215 RMVRDRV----KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M D +P+ +T+N+++ GFC+ + A LF +RE ++ S+N ++G
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGL 336
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
KF E + +MI+ G S + IL+DGLC G + A +V R GV P
Sbjct: 337 VRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDA 396
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ C G A ++ E+ + LP+ C L+ L + + EA L+ K
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRK 456
Query: 391 MLKEGILPDSVTFNCLLEDLCDVG------RTVDADRLRLLASTKGLD------------ 432
M ++G D+VT N +++ LC G V R+ A+ L
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 433 -----PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
PD +TY L++G + R E + L EM+ E PD YN ++
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 134/291 (46%), Gaps = 13/291 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ L+NG K F +A + M+ ++++PD + +NI I FC+ K A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRV 581
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M +KGC+ ++ ++N+LI G + + E + EM E G + T + LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCE 641
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV----VDELWKKGNLP 363
G+V A L+ + ++ + P F + L+ C + +A EV V +K L
Sbjct: 642 GGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL- 422
S++ L G + ++A+ L+E +L G + + L+ LC A +
Sbjct: 702 SLMFNELLAAG-----QLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGIL 756
Query: 423 -RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+++ G DP + ++ G + +KE N +M++ + ++A
Sbjct: 757 HKMIDKGYGFDPAALM--PVIDGLGKMGNKKEANNFAEKMMEMASVGEVAN 805
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
N P + L+E R R+ S L + M+ GI P++ TFN L+ LCD VDA
Sbjct: 108 NKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCD-SSCVDAA 166
Query: 421 R----------------------------------LRLLASTK--GLDPDGMTYHILVSG 444
R L LL S + G+ P+ + Y+ +VS
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSS 226
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ RE R + E LV +M +EG +PD+ T+NS + L K + +R
Sbjct: 227 FCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ + + F M + P+V +N +I+G C +D+A F ++
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEE-AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 333
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++P ++T++IL+ G R K+ A + +EM +KG PNV+ +N LI F
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M+ G +S T L+ G C G+ A L+ + G +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC AL V E+ + P TTLI GL + K +A L + L +G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D+ T N LL LC+ G+ +A R++ +G D ++Y+ L+SG + + E
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++EM+ G PD TY+ + GL N K
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 157/345 (45%), Gaps = 35/345 (10%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
M D L F L + P + LI+G K + KAL + + + D T N
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+ G C K D A + +E+ +GC + VS+NTLI G G++K DE EM++
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF--------------- 334
G + + T IL+ GL N +V +A + D R G+LP + Y
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 335 --------------------GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
L+ C G +ALE+ +++ KG P+ T+LI+G
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + + EA L E+M EG+ P+ + L++ +G+ V + L +K + P+
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY +++ GY R+ E L+NEM ++G +PD TY ++ G
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + N+L+ V+ EF K +D + + V PDV F I+ FC+ K + A+ L
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M E G PNVV+FNT+I G ++DE +M+E G E + +T ILV GL
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ A ++ + +++G P Y L++ G+ A+E+ D + KG +
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 415
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L+++ML G + +F ++ LC A R
Sbjct: 416 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 475
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + P G L+SG + + + L + L++GF+ D T N+ + GL A K
Sbjct: 476 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
FD AL F M+ + P LISG C++ K AL L+ + KG + + N
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G K DE + E++ GC V+ L+ G C + ++ +A + + +RG
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P ++ Y L+ L A++ D+ + G LP V + +I+G + + E
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++M+ + + P++V +N L+ C GR A LR KG+ P+ TY L+ G
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +R +E + L EM EG P++ Y + +DG + V+
Sbjct: 704 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y++LI G + ++A+ F+D R+ + PDV T++++I G C+ ++ +
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F EM K PN V +N LIR + + + + +M G +S T L+ G+
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---VDELWKKGNLP 363
RV +A L + G+ P F Y L++ G G G ++V + E+ K P
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALID---GYGKLGQMVKVECLLREMHSKNVHP 761
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ I T +I G R EAS L+ +M ++GI+PDS+T+ + G ++A
Sbjct: 762 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---- 817
Query: 424 LLASTKGLDPDGMTYHILVSGYTR 447
KG D + Y ++ G+ +
Sbjct: 818 ----FKGSDEE--NYAAIIEGWNK 835
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 229 NILISGFCRNKKFD---LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
++LI +C K D LAL +F + KG P+ + N L+ +F + A++
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFD 263
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
++ G ++ C G+V +A +L GV P + +++ L G
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A +++ ++G P++I + L++GL R ++ +A ++++M K+G P+ + +N
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ + G A ++ L +KGL TY+ L+ GY + + E L+ EML G
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443
Query: 466 FIPDLATYNS 475
F + ++ S
Sbjct: 444 FNVNQGSFTS 453
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLR-------------KGV------------ 382
+AL+V L KG PS C L+ L R KGV
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 281
Query: 383 ---------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
EA L KM + G+ P+ VTFN +++ L GR +A + +G++P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY ILV G TR R + ++ EM +GF P++ YN+ +D A
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ + A+ ++ R++ L E M+ K I P+ + Y LI G ++A ++
Sbjct: 660 VYNHLIRAYCRSGRLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++P+V + LI G+ + + L REM K +PN +++ +I G+ +
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
E + EM E G S+T + + G +G VL+A
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 1/300 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+ N+ I+ K DKA ++ + R + V++NILI+ FC+ K+ D A+ LF EM
Sbjct: 68 LVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEM 127
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ GC P+ ++NTLI G + E ++ G S +T ILVDG C RV
Sbjct: 128 KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRV 187
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A EL+ + RG + Y +++ L +G A + + K G P + T L
Sbjct: 188 PEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVL 247
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+GL + + A + L+ G P V +CL++ C G +A R+ L + +G
Sbjct: 248 IDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGC 307
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
P+ ++ +IL++G + R + + E++ PD+ TY+++MDGL A + V Q R
Sbjct: 308 TPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHR-VDQAR 366
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 2/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NAF K R+++ + F M K PS S YN LI G + +A FY+R+
Sbjct: 104 YNILINAFCKTKRIDEAIQLFGEM-KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +T+NIL+ GFC+ + A+ L E+ +G +N +I F + K
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E M + G VT +L+DGLC RV +A E+ + G P L
Sbjct: 223 HEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCL 282
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G A + + + +G P+ ++C LI GL + ++ +A + E+++K
Sbjct: 283 MDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQA 342
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT++ ++ LC R A ++ + KG PD + Y L+SG R E
Sbjct: 343 KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARK 402
Query: 457 LVN-EMLDEGFIPDLATYNSYMDGLSNA 483
+ +M G P+ T N ++G A
Sbjct: 403 VFEVDMRAAGCAPNNFTCNVLVNGFGLA 430
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 23/326 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V+ F KA+R+ + A E + +L+ G + + YN +I+ K + +A F++
Sbjct: 174 YNILVDGFCKADRVPE---AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFN 230
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM +D V+P VTF +LI G C+ + A +F E G +P+VV + L+ GF
Sbjct: 231 RMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYG 290
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + M GC + V+C IL++GLC R+ +A E+ + +R P Y
Sbjct: 291 GVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYS 350
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME-KMLK 393
++ LC A +V+ L KG P V+ T LI GL L + EA + E M
Sbjct: 351 TFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRA 410
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G P++ T N L+ GR +A L +G+ PD T+ + +
Sbjct: 411 AGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMAN---------- 460
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
N EG+ D+ ++N ++ G
Sbjct: 461 -----NTAKTEGW--DIYSWNEWITG 479
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 22/254 (8%)
Query: 77 FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVL-NFI 135
F K K+H F + D R TF ++ L + R + + +++
Sbjct: 217 FKKGKIHEAELFFNR--------MEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYL 268
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ P + I SC ++ F K +++ FE M P+ N+
Sbjct: 269 ESGGSP--SVVICSC---------LMDGFCKYGGVDEAWRIFELMTNR-GCTPNDVSCNI 316
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LING K + +A ++ +V+ + KPDVVT++ + G CR + D A + + +KG
Sbjct: 317 LINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKG 376
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNM-AYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P+VV + LI G + DE + +M GC ++ TC +LV+G GR+ +A
Sbjct: 377 GTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEA 436
Query: 315 CELVIDFSRRGVLP 328
EL F RGV P
Sbjct: 437 RELFQRFVERGVQP 450
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 98/254 (38%), Gaps = 3/254 (1%)
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C K D AL LF + GC + + L+R + +E + + M++
Sbjct: 9 LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
I +D LC + KA + L Y L+ C A+++
Sbjct: 66 RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
E+ G PS TLI GL R+ + EA E++L G +T+N L++ C
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R +A L +G Y+ ++ ++ + E E N M +G P T+
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFT 245
Query: 475 SYMDGLSNARKSVR 488
+DGL A + R
Sbjct: 246 VLIDGLCKANRVAR 259
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ + + F M + P+V +N +I+G C +D+A F ++
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEE-AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++P ++T++IL+ G R K+ A + +EM +KG PNV+ +N LI F
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M+ G +S T L+ G C G+ A L+ + G +
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC AL V E+ + P TTLI GL + K +A L + L +G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D+ T N LL LC+ G+ +A R++ +G D ++Y+ L+SG + + E
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++EM+ G PD TY+ + GL N K
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 157/345 (45%), Gaps = 35/345 (10%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
M D L F L + P + LI+G K + KAL + + + D T N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+ G C K D A + +E+ +GC + VS+NTLI G G++K DE EM++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF--------------- 334
G + + T IL+ GL N +V +A + D R G+LP + Y
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 335 --------------------GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
L+ C G +ALE+ +++ KG P+ T+LI+G
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + + EA L E+M EG+ P+ + L++ +G+ V + L +K + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY +++ GY R+ E L+NEM ++G +PD TY ++ G
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + N+L+ V+ EF K +D + + V PDV F I+ FC+ K + A+ L
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M E G PNVV+FNT+I G ++DE +M+E G E + +T ILV GL
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ A ++ + +++G P Y L++ G+ A+E+ D + KG +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L+++ML G + +F ++ LC A R
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + P G L+SG + + + L + L++GF+ D T N+ + GL A K
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
FD AL F M+ + P LISG C++ K AL L+ + KG + + N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G K DE + E++ GC V+ L+ G C + ++ +A + + +RG
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P ++ Y L+ L A++ D+ + G LP V + +I+G + + E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++M+ + + P++V +N L+ C GR A LR KG+ P+ TY L+ G
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +R +E + L EM EG P++ Y + +DG + V+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y++LI G + ++A+ F+D R+ + PDV T++++I G C+ ++ +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F EM K PN V +N LIR + + + + +M G +S T L+ G+
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---VDELWKKGNLP 363
RV +A L + G+ P F Y L++ G G G ++V + E+ K P
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALID---GYGKLGQMVKVECLLREMHSKNVHP 748
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ I T +I G R EAS L+ +M ++GI+PDS+T+ + G ++A
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---- 804
Query: 424 LLASTKGLDPDGMTYHILVSGYTR 447
KG D + Y ++ G+ +
Sbjct: 805 ----FKGSDEE--NYAAIIEGWNK 822
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 229 NILISGFCRNKKFD---LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
++LI +C K D LAL +F + KG P+ + N L+ +F + A++
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFD 250
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
++ G ++ C G+V +A +L GV P + +++ L G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A +++ ++G P++I + L++GL R ++ +A ++++M K+G P+ + +N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ + G A ++ L +KGL TY+ L+ GY + + E L+ EML G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 466 FIPDLATYNS 475
F + ++ S
Sbjct: 431 FNVNQGSFTS 440
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLR-------------KGV------------ 382
+AL+V L KG PS C L+ L R KGV
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 268
Query: 383 ---------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
EA L KM + G+ P+ VTFN +++ L GR +A + +G++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY ILV G TR R + ++ EM +GF P++ YN+ +D A
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ + A+ ++ R++ L E M+ K I P+ + Y LI G ++A ++
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLFE 704
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++P+V + LI G+ + + L REM K +PN +++ +I G+ +
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
E + EM E G S+T + + G +G VL+A
Sbjct: 765 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 145/285 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +LI+G K + +A + M +PD++T+N L++G C + + A L
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F + ++G NV S+N LI G+ ++K DE EM G + S+VT L+ LC
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV A +L ++ G K Y L++ LC G+ A+++ + K + P++
Sbjct: 1308 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV 1367
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ L++G+ R K EA +++ K G+ PD++ +N L+ LC+ G +A +L
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
KG PD +T+++++ +EN E L+ EM + F PD A
Sbjct: 1428 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAV 1472
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 154/331 (46%), Gaps = 2/331 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + +N KA + + E M+ G V Y ++I+ K +AL +
Sbjct: 1052 KTYGILINGLCKARKTGLAIKLHEKMKGNCKG--DVFTYGMIIDALCKDGMTTEALDMFS 1109
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDVV ++ L+ G CR + AL F+EM +G + +V ++N+LI G
Sbjct: 1110 EMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 1169
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E M++ G + T IL+DGLC EG+V +A +++ +G P Y
Sbjct: 1170 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN 1229
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A ++ + L +G +V + LI G + +K EA E+M +
Sbjct: 1230 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK 1289
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P +VT+N L+ LC GR A +L + T G TY +L+ G + +E
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L + P++ ++ +DG+ A K
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 6/314 (1%)
Query: 169 RMNDGLLAFEAMRKLI-DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++ND + F+ R L + P +N L+ K + Y ++ ++PD+ T
Sbjct: 926 KLNDAIKLFD--RSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYT 983
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI C + G+F ++G P+ V+ TL++G + E + V + EM
Sbjct: 984 LNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMT 1043
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD-FDYFGLVEKLCGEGNA 346
+ G + T IL++GLC + A +L +G D F Y +++ LC +G
Sbjct: 1044 KKGLLGDAKTYGILINGLCKARKTGLAIKL--HEKMKGNCKGDVFTYGMIIDALCKDGMT 1101
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
AL++ E+ G LP V+ ++L++GL R + EA ++M GI D T+N L
Sbjct: 1102 TEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSL 1161
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ L G + L +G PD T+ IL+ G +E + E + ++ M +G
Sbjct: 1162 IHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGK 1221
Query: 467 IPDLATYNSYMDGL 480
PD+ TYN+ M+GL
Sbjct: 1222 EPDILTYNTLMNGL 1235
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 157/351 (44%), Gaps = 13/351 (3%)
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
+ + P PC++ + ++ +++ F ++ND + +P + N
Sbjct: 938 LCSEPMPCTDTFNHLLASVAKLGYYS-TVFPMYRKIND-----------VGIQPDLYTLN 985
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+LI+ R G + ++ +PD VT L+ G A+ LF EM +K
Sbjct: 986 ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G + ++ LI G RK + + +E ++ C+ T +++D LC +G +A
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKL-HEKMKGNCKGDVFTYGMIIDALCKDGMTTEA 1104
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + G+LP Y L++ LC G ALE E+ +G V +LI G
Sbjct: 1105 LDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L R E + + M+ G PD+ TF L++ LC G+ +A ++ L KG +PD
Sbjct: 1165 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+TY+ L++G + ++ L + D G ++ +YN ++G +K
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ K ++ + E MR G+ P + YN L+NG + + A ++
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRH--KGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +K +V ++NILI+G+C+++K D A F EMR KG P+ V++NTLI +
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310
Query: 276 FDEGVNMAYEMIELG--------CEFSSVTCE---------------------------I 300
+ EM G C C+ I
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+DG+C G++ +A + + S+ G+ P Y L+ LC +G A++++ ++ +KG
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
LP I +I+ L + + EA L+E+M PD + LL
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI PD T N L+ C + + +G +PD +T LV G EN +
Sbjct: 976 GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L +EM +G + D TY ++GL ARK+
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 2/353 (0%)
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
N + A+ S F C ++ +++ + R++D + FE + P V
Sbjct: 25 NLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWS 84
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NV+I G + + KAL +RM PD VT NIL+ G CR + + R ++
Sbjct: 85 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 144
Query: 253 EKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G C PNVV+F ++I G+ K ++ + + +M+ G ++VT +L++G G +
Sbjct: 145 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 204
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A E+ +R P + L++ C G AL + ++ + P+V + +
Sbjct: 205 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 264
Query: 372 IEGLRRLRKGVEASGLMEKM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
I L + + EA GL+ ++ L+ I P + +N +++ LC G+ +A+ +R KG
Sbjct: 265 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 324
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD TY IL+ GY ++R E +EM++ G PD T N ++ L A
Sbjct: 325 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 377
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 7/284 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + V+ + N ++ G E +R+L DG P+V + +I+G+ K
Sbjct: 111 FGCSPDTVTHNILVDGLCRTNEVSRG---HEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ + A+ Y+ MV + P+ VT+N+LI+G+ + A+ ++++M C P+VV+F+
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 227
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + D+ + + +M + + + T I++ LC + R +A L+ + + R
Sbjct: 228 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 287
Query: 325 -GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A + + +KG P T LI G + E
Sbjct: 288 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 347
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
A +M++ G PDS+T NC + L G + D + LAS
Sbjct: 348 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 391
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 2/267 (0%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PD + L+S D + L + E GC ++N L+ G + + V
Sbjct: 8 SPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVA 67
Query: 282 MAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ I+ V + +++ G+C G+V KA ELV + G P + LV+ L
Sbjct: 68 LFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGL 127
Query: 341 CGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EV+ L + G +P+V+ T++I G + K +A + M+ GI+P+
Sbjct: 128 CRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPN 187
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+VT+N L+ VG A + + PD +T+ L+ GY R + + + +
Sbjct: 188 TVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWS 247
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKS 486
+M P++ T++ + L +S
Sbjct: 248 DMAQHRIQPNVYTFSIIIHSLCKQNRS 274
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 2/227 (0%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G +P+ + L+ D + + E GC + L+ L GRV
Sbjct: 6 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEK-LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
L + + V D F +V K +C G ALE+V+ + + G P + L++
Sbjct: 66 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125
Query: 374 GLRRLRKGVEASGLMEKMLKEGI-LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL R + ++ ++ ++G+ +P+ VTF ++ C G+ DA + G+
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +TY++L++GY + + +M PD+ T++S +DG
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDG 232
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILV 442
++ L+ K + G ++ +N L+ L GR D L + PD ++++++
Sbjct: 30 SATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVI 89
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G R + ++ LV M + G PD T+N +DGL + R
Sbjct: 90 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSR 135
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 159/362 (43%), Gaps = 37/362 (10%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+I+ ++ F K + ++ L FE MR + RP V Y LI G K D+A FY
Sbjct: 266 KIYTMIISLFFKLDNVHGALSLFEEMRYMY-CRPDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ KPD V N +I+ + + D L LF EM C PNVV++NT+I+ F +
Sbjct: 325 EMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESK 384
Query: 275 -KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E + M G S T IL+DG C R+ KA L+ + +G P Y
Sbjct: 385 SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 334 FGLVEKL-------------------CGEGNAGI----------------ALEVVDELWK 358
L++ L CG +A + A+ + DE+ K
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+V A L+ GL R EA M KM + G LPD ++N +L L G
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + + PD ++Y+ ++S + +E L+ EM GF DL TY+S ++
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
Query: 479 GL 480
+
Sbjct: 625 AI 626
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 190/497 (38%), Gaps = 50/497 (10%)
Query: 27 PLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLL---HFLKSKLH 83
P P + P T + +R LK P + +L H+L ++
Sbjct: 38 PSPRNEDAVAALSPRYTNSVRVLDERFIRILKIFKWGPDAERALEVLMLRVDHWLVREVM 97
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS 143
+ F WA+ +++HD +T++ ++ L ++ E+ ++ + +P C
Sbjct: 98 KTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPI-C- 155
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
+ + E+ ++ NA +M + K +P+ YN +I +
Sbjct: 156 ---VVTPMELSQVIRMLGNA-----KMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHE 207
Query: 204 REFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+++K Y+ M + +PD VT++ LIS FC+ + D A+ L EM+E G P
Sbjct: 208 GQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ +I FF +++ EM + C T L+ GL GR+ +A +
Sbjct: 268 YTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
R G P ++ L G L++ +E+ +P+V+ T+I+ L + V
Sbjct: 328 REGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRV 387
Query: 383 -EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP-------- 433
E E+M GI P T++ L++ C R A L KG P
Sbjct: 388 SEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSL 447
Query: 434 ---------------------------DGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
Y +++ + R + NL +EM G
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGC 507
Query: 467 IPDLATYNSYMDGLSNA 483
P++ YN+ M GL+ A
Sbjct: 508 TPNVYAYNALMSGLARA 524
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 164/360 (45%), Gaps = 13/360 (3%)
Query: 124 RFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL 183
++ ++H + N +S N C D + + ++AF K R + + M++
Sbjct: 209 QYEKVHELYNEMS-NEGHCQPDTV--------TYSALISAFCKLGRQDSAIRLLNEMKE- 258
Query: 184 IDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+G +P+ IY ++I+ F K AL ++ M +PDV T+ LI G + + D
Sbjct: 259 -NGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRID 317
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A + EM+ +GC P+ V N +I + D+G+ + EM C + VT ++
Sbjct: 318 EAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTII 377
Query: 303 DGLC-NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
L ++ RV + G+ P F Y L++ C A+ +++E+ +KG
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P A +LI+ L + ++ A L +++ + + + +++ L GR DA
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L S G P+ Y+ L+SG R E + +M + G +PD+ +YN ++GL+
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLA 557
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 157/376 (41%), Gaps = 47/376 (12%)
Query: 153 MERIFHFAVNAFVKAN-RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
M R+ H+ V +K + +N + F K + + S Y LI+ C E + G
Sbjct: 85 MLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIH----CLELVEQYG 140
Query: 212 FYDRMVRDRVK-PDVVTFNILISGFCR----NKKFDLALGLFREMREKGCNPNVVSFNTL 266
+M+++ V+ P V + +S R K A+ +F +++ + C P ++N++
Sbjct: 141 EMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSM 200
Query: 267 IRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
I E ++++ + EM G C+ +VT L+ C GR A L+ + G
Sbjct: 201 IIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENG 260
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y ++ N AL + +E+ P V T LI GL + + EA
Sbjct: 261 MQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAY 320
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--------------------RLL 425
+M +EG PD+V N ++ L GR D +L + L
Sbjct: 321 HFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKAL 380
Query: 426 ASTK----------------GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+K G+ P TY IL+ G+ + NR ++ L+ EM ++GF P
Sbjct: 381 FESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPC 440
Query: 470 LATYNSYMDGLSNARK 485
A Y S +D L A++
Sbjct: 441 PAAYCSLIDALGKAKR 456
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 3/223 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV-SIYNVLINGFVKCREFDKALGFYDR 215
+ ++ F K NR+ ++ E M + G P + Y LI+ K + +D A +
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDE--KGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + + ++I + + D A+ LF EM + GC PNV ++N L+ G
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACM 526
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + +M E GC + I+++GL G +A E++ + + P Y
Sbjct: 527 LDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
++ L G A E++ E+ G +I ++++E + ++
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKV 629
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 161/337 (47%), Gaps = 7/337 (2%)
Query: 145 DGIFSCPEMERI------FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLIN 198
D I E E++ + + + + + + FE MR+ + V +Y+ +I+
Sbjct: 272 DEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREK-NIEMDVYVYSSMIS 330
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ +A +D M + + P+ T+ LI G C+ + + A L EM+ KG +
Sbjct: 331 WSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDL 390
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N+V FNT + G+ K DE + + M + G T IL +GLC R +A ++
Sbjct: 391 NLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCIL 450
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+GV P + +E C EGN A + ++ KKG +P++I TLI+ +
Sbjct: 451 NSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKK 510
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K +A + +M+ +G+LPD T++ L+ C VGR +A +L KG+ + TY
Sbjct: 511 EKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATY 570
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
++SG ++E R E L +EM+ G IPD + S
Sbjct: 571 TSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTS 607
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 143/293 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN L+N +V ++ M +++V V T++ILI + + + A
Sbjct: 249 KPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEK 308
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F EMREK +V ++++I + EM + ++ T L+ G+C
Sbjct: 309 IFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVC 368
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ A L+++ +GV + ++ C G AL + + KKG V
Sbjct: 369 KAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVF 428
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L GL +L + EA ++ M+++G+ P+ VTF +E C G +A+RL
Sbjct: 429 TYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDM 488
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG P+ +TY+ L+ Y ++ + K+ + +EM+++G +PDL TY+S + G
Sbjct: 489 EKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 135/293 (46%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
SV+ Y++LI + + ++A ++ M ++ DV ++ +IS R A LF
Sbjct: 286 SVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALF 345
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM ++ PN ++ LI G + + + EM G + + V +DG C
Sbjct: 346 DEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRR 405
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G++ +A L ++G+ F Y L LC A +++ + +KG P+V+
Sbjct: 406 GKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTF 465
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T IE + EA L M K+G +P+ +T+N L++ C + A +++
Sbjct: 466 TMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMIN 525
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
KGL PD TY L+ G R E L NEM +G ++ATY S + GLS
Sbjct: 526 KGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLS 578
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 161 VNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ KA +M +L E K +D ++ I+N ++G+ + + D+AL M +
Sbjct: 364 IGGVCKAGQMEAAEILLLEMQSKGVD--LNLVIFNTTMDGYCRRGKMDEALRLQAIMEKK 421
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ DV T+NIL +G C+ ++D A + M EKG PNVV+F I + E E
Sbjct: 422 GINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEA 481
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +M + G + +T L+D C + +V +A ++ + +G+LP + Y L+
Sbjct: 482 ERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C G AL++ +E+ KG +V T++I GL + + EA L ++M+K G++PD
Sbjct: 542 ECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPD 601
Query: 400 SVTFNCLL 407
F L+
Sbjct: 602 DRVFTSLV 609
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 189/454 (41%), Gaps = 70/454 (15%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANP---CPCSNDGIFS 149
FH + S + D L ++ L + +F+ + S+LN + + CP S+ +
Sbjct: 77 FHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMKSILNGLVTDSDIECPVSSI-VDL 135
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN--------------- 194
E E HF + D L + +L D ++ +Y+
Sbjct: 136 VDEFES--HFV-------EKFCDMLFRVCSDNRLFD--ETIRVYDYVEEKGLVIEERSCF 184
Query: 195 VLINGFVKCREFDKALGFYDRMVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
VL+ +C E D + F+ RMV ++ + V + ++I CR + + A L EM
Sbjct: 185 VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG 244
Query: 254 KG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL-GCEFSSVTCEILVDGLCNEGRV 311
KG PNV ++NTL+ + G RK +GV+ +++E FS T IL+ + G +
Sbjct: 245 KGIVKPNVFTYNTLLNAYVG-RKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDI 303
Query: 312 -----------------------------------LKACELVIDFSRRGVLPKDFDYFGL 336
+A L + S+R ++P Y L
Sbjct: 304 EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGAL 363
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +C G A ++ E+ KG +++ T ++G R K EA L M K+GI
Sbjct: 364 IGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGI 423
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D T+N L LC + R +A + KG+ P+ +T+ + + Y +E E E
Sbjct: 424 NADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAER 483
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
L +M +G +P++ TYN+ +D K V+Q
Sbjct: 484 LFRDMEKKGEVPNIITYNTLIDAYCKKEK-VKQA 516
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+K+ +N GLL P + Y+ LI+G D+AL ++ M + +
Sbjct: 519 IKSEMINKGLL------------PDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
V T+ +ISG + + D A L+ EM + G P+ F +L+ F
Sbjct: 567 VATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 147/292 (50%), Gaps = 1/292 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ LI+G ++ + A+ + + PDV T+N +ISGFC+ A L
Sbjct: 619 PDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQL 678
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +KG +PN++++N LI G + + + + G ++VT ++DG C
Sbjct: 679 HEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCK 738
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + KA L + + +GV P F Y L++ EGN AL + E +KG S +
Sbjct: 739 SGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG-FASTSS 797
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++G + K +EA+ L+E M+ + + PD VT+ L++ C G +A++ +
Sbjct: 798 LNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQ 857
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L P+ +TY L+SGY RR E L +EM+ + PD T++ +D
Sbjct: 858 KRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDA 909
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 3/320 (0%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+NA +A +G L FE K PS+ YNV+I G + E D+A M +
Sbjct: 243 INAHFRAGNAKEGKRLLFEMEEK--GCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKK 300
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ DV T++ILI GF + K+ A + EM KG P V++ LI GF + E
Sbjct: 301 GLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEA 360
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM+ G + + T LV G+C G + KA L+ + G+ P Y ++E
Sbjct: 361 FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEG 420
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
E N +++ E+ K +P+ C +I GL R +AS + E M+ G+ P+
Sbjct: 421 YLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPN 480
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+V + L++ GR +A R+ + KG+ PD + Y+ ++ G + + +E ++ +
Sbjct: 481 AVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLV 540
Query: 460 EMLDEGFIPDLATYNSYMDG 479
EM++ G P++ TY + + G
Sbjct: 541 EMIERGLKPNVYTYGALIHG 560
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 15/334 (4%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRK---------LIDGRPSVSIYNVLINGFVKCREFDKA 209
F NA VK G+ F M K ++ +P YN +I G++K + +
Sbjct: 377 FTYNALVK------GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
M + + P T ++I+G CR+ + A +F M G PN V + TLI+G
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
E +F E V + M + G + + ++ GLC ++ +A + +++ RG+ P
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ Y L+ C G +A E+ G P+ + CT LI+G + EA+ +
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR 610
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
ML + PD T++ L+ L G+ A L KGL PD TY+ ++SG+ ++
Sbjct: 611 CMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQG 670
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ L M +G P++ TYN+ ++GL A
Sbjct: 671 GIGKAFQLHEYMCQKGISPNIITYNALINGLCKA 704
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + LI+G+ K +A + M+ V PDV T++ LI G RN K A+ L
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E EKG P+V ++N++I GF + + + M + G + +T L++GLC
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A EL +G+ Y +++ C GN A + DE+ KG P
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ LI+G R+ +A L + +++G S + N L++ C G+ ++A++L
Sbjct: 764 YSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMV 822
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K + PD +TY IL+ + + KE E +M +P+ TY + + G + A
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMA 878
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 187/424 (44%), Gaps = 28/424 (6%)
Query: 61 LLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLA 120
LL +N+++P ++H + +K + P+ DF F W F +F + L
Sbjct: 57 LLPLVSNKLSPD-VVHSVITKQVNDPK-RLLDF--FNWVQFQMGFSQKLQSFSILALILC 112
Query: 121 SSYRFSELHSVLNFI----SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLA 176
+S FS SV+N + S + I SC E F + + ND +
Sbjct: 113 NSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKE----FDLNNVNGNENSNNNDRGVV 168
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
FE +LI+G+ K FD+A+ F+ R+ ++ N L+S
Sbjct: 169 FE----------------LLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLL 212
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ K +L + M E +V ++ LI F EG + +EM E GC S V
Sbjct: 213 KANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLV 272
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T +++ GLC G V +A EL ++G++ F Y L++ + A +++E+
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEM 332
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ KG P +A T LI+G R EA + E+ML G+ + T+N L++ +C G
Sbjct: 333 FSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
AD L G+ PD TY+ ++ GY +E ++L++EM +P T
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMI 452
Query: 477 MDGL 480
++GL
Sbjct: 453 INGL 456
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ ++ING + + A ++ MV VKP+ V + LI G + +F A+ +
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M +KG P+V+ +N++I G RK +E + EMIE G + + T L+ G C
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A + G+ P D L++ C EG+ A + + + P V
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ LI GL R K A L+ + L++G++PD T+N ++ C G A +L
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KG+ P+ +TY+ L++G + + L + + +G + TY + +DG
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDG 735
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 137/296 (46%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V Y LIN + + M P +VT+N++I G CR + D A L +
Sbjct: 236 VYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKK 295
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
M +KG +V +++ LI GF +++ E M EM G + V L+DG +G
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQG 355
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+A + + RGV F Y LV+ +C G+ A +++E+ G P
Sbjct: 356 DSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYN 415
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+IEG + + L+ +M K ++P + T ++ LC G DA R+ + +
Sbjct: 416 NMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL 475
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ P+ + Y L+ G+ +E R +E ++ M +G PD+ YNS + GL +RK
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRK 531
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 42/362 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS---IYNVLINGFVK---CRE----- 205
++ + +A +++ AFE ++KL+D + V+ Y++LI+GF K C E
Sbjct: 274 YNVVIGGLCRAGEVDE---AFE-LKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLML 329
Query: 206 ---FDKAL------------GFY------------DRMVRDRVKPDVVTFNILISGFCRN 238
F K L GF + M+ VK ++ T+N L+ G C+
Sbjct: 330 EEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKF 389
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ A L EM G P+ ++N +I G+ E+ ++ EM + ++ TC
Sbjct: 390 GDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTC 449
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
++++GLC G + A + GV P Y L++ EG A+ ++ + K
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P V+ ++I GL + RK EA + +M++ G+ P+ T+ L+ C G
Sbjct: 510 KGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQV 569
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
ADR G+ P+ + L+ GY +E E ++ ML PD+ TY++ +
Sbjct: 570 ADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIH 629
Query: 479 GL 480
GL
Sbjct: 630 GL 631
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 3/233 (1%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
L E+++K G S S N L++GF K + +A + MV VKPD VT+ ILI
Sbjct: 783 LFLESVQK---GFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C+ A F +M+++ PN +++ L+ G+ + E + EMI E
Sbjct: 840 HCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
VT +++D EG +K +LV D ++G L++ LC + + L+V++
Sbjct: 900 GVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLE 959
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
++ ++G S+ C+TL+ + K A+ +++ M++ +PDS N L+
Sbjct: 960 KIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 135/328 (41%), Gaps = 14/328 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI------YNVLINGFVKCREFDKAL 210
++ +N KA + E R+L DG P + Y +I+G+ K KA
Sbjct: 694 YNALINGLCKAGEI-------ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAF 746
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+D M V PD ++ LI G + + AL LF E +KG + S N L+ GF
Sbjct: 747 RLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGF 805
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K E + +M++ + VT IL+D C G + +A + +D +R ++P
Sbjct: 806 CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ G + DE+ K P + + +I+ + V+ L++
Sbjct: 866 LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDD 925
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
MLK+G + L++ LC + ++ +GL+ T LV + + +
Sbjct: 926 MLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMD 478
++ M+ ++PD N ++
Sbjct: 986 MDGAARVLKSMVRFKWVPDSTELNDLIN 1013
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++ +++GF + + A ++D M + + D VT+ LI+G CR + A + +
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM +KG + + V++ LI G+ K E + +M++ + VT L DGLC +G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
V A EL+ + +G+ F Y L+ LC GN A+ + ++ + G P V T
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
T+I L + ++ A L+++ML +GI P VT+N L+ C GR RL K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ P+ TY+ L+ Y E K + ML + +P+ TYN + G AR
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 23/413 (5%)
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS--VLNFISANPC-- 140
HP FA A+ + + R +VR+L RF H V FIS
Sbjct: 144 HPHL----LQSFAVAAHLAAVRDPGAARAILVRAL----RFPSPHRHFVEQFISTYKAFS 195
Query: 141 --PCSNDGIFSC----PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-- 192
P S D + C P + R+ + ++ ++ L + +L P +
Sbjct: 196 SDPVSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCS 255
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+L+ A +D M PDVVT+ I++ G+C + + A+ L EM
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G N V++ ++I E + + V + +M+ G + ++ G C +G +
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A + +RG+ Y L+ LC G A V+ E+ KG + T LI
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G ++ K EA + KM+++ + P+ VT+ L + LC G A+ L +KGL+
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ TY+ L++G + ++ + +M + G PD+ TY + + L +++
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LING K ++A+ M +KPDV T+ +I C++K+ D A L +EM
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+KG P +V++N L+ GF + + G + M+E ++ T L+ C E +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
E+ + V+P + Y L++ C N AL E+ +KG + + LI
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
L + +K EA L EKM KE + + +N
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ + K +M + AF K++ R P+V Y L +G K + A M
Sbjct: 432 IDGYCKVGKMTE---AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++ ++ T+N LI+G C+ + A+ +M E G P+V ++ T+I ++ D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM++ G + + VT +L++G C GRV L+ + + P Y L++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C E N E+ + + +P+ LI+G + R EA +M+++G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668
Query: 399 DSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ ++N L+ L + +A RL ++ +PD ++I +S E+ +
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLS--FNEDNLESTLA 726
Query: 457 LVNEMLDEGFIPDLA 471
L +E+++ + +A
Sbjct: 727 LCDELVEVTLVKSIA 741
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK--PDVVTFNILISGFCRNKKFDL 243
RP +N + V + D+AL RM R PD ++N++I+G R+ K
Sbjct: 154 ARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSD 213
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
AL +F EM ++G PN +++NT+I G + G + +M++ G + + VT +L+
Sbjct: 214 ALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS 273
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC GR+ + L+ + + +LP F Y L + L G++ L + E KKG +
Sbjct: 274 GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
C+ L+ GL + K +A ++E ++ G++P + +N L+ C V A +
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ + PD +TY+ L++G + E E+LV EM G P + T+N+ +D A
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 1/320 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDR 215
++ AV A V A +++ L M + P + YNV+I G + + AL +D
Sbjct: 161 WNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDE 220
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV V P+ +T+N +I G + + L +M + G PNVV++N L+ G +
Sbjct: 221 MVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGR 280
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + EM T IL DGL G L + ++GV+ +
Sbjct: 281 MDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSI 340
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC +G A +V++ L G +P+ TLI G ++R A + E+M
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD +T+N L+ LC + +A+ L + G+DP T++ L+ Y R + ++
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460
Query: 456 NLVNEMLDEGFIPDLATYNS 475
++++M D+G ++ ++ S
Sbjct: 461 TVLSDMQDKGIKSNVISFGS 480
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +IYN LING+ + R+ A +++M ++PD +T+N LI+G C+ + A L
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDL 427
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G +P+V +FNTLI + + ++ + +M + G + + ++ +V C
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK 487
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A ++ D + V+P Y +++ G A +V+++ G S+
Sbjct: 488 NGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFT 547
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR-LRLLA 426
L++GL + + EA L+ + +G+ PD V++N ++ C+ G D DR L LL
Sbjct: 548 YNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG---DTDRALELLQ 604
Query: 427 STKGLD--PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
D P TYH L+S R + E L M+ + P + Y +
Sbjct: 605 EMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+NG K + KA + +V + P +N LI+G+C+ + A +F +M+
Sbjct: 339 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS 398
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ P+ +++N LI G E ++ EM + G + S T L+D G++ K
Sbjct: 399 RHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEK 458
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
++ D +G+ + +V+ C G A+ ++D++ K +P+ ++I+
Sbjct: 459 CFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIID 518
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+A L+EKM G+ T+N LL+ LC + +A+ L + +GL P
Sbjct: 519 AYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRP 578
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D ++Y+ ++S + L+ EM P L TY+ + L +A +
Sbjct: 579 DVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGR 630
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 157/368 (42%), Gaps = 38/368 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ VK + G + M L DGR P+V YNVL++G + D+ D
Sbjct: 233 YNTMIDGHVKGGDLEAGFRLRDQM--LQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDE 290
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-------CN----------- 257
M + PD T++IL G R L LF E +KG C+
Sbjct: 291 MTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGK 350
Query: 258 -----------------PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
P +NTLI G+ R ++ +M +T
Sbjct: 351 VAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNA 410
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++GLC + +A +LV++ + GV P + L++ G V+ ++ KG
Sbjct: 411 LINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKG 470
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+VI+ ++++ + K EA +++ M+ + ++P++ +N +++ + G T A
Sbjct: 471 IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + G+ TY++L+ G + ++ E E L+ + ++G PD+ +YN+ +
Sbjct: 531 LLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISAC 590
Query: 481 SNARKSVR 488
N + R
Sbjct: 591 CNKGDTDR 598
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 7/314 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ +N + + + FE M+ RP YN LING K +A
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSR-HIRPDHITYNALINGLCKMEMITEAEDLVME 430
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + V P V TFN LI + R + + + +M++KG NV+SF ++++ F K
Sbjct: 431 MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGK 490
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + +MI ++ ++D G +A LV GV F Y
Sbjct: 491 IPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNL 550
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ LC A E++ L +G P V++ T+I A L+++M K
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P T++ LL L GR D + L K ++P Y G EN K
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY-----GTRCENESKVA- 664
Query: 456 NLVNEMLDEGFIPD 469
+L EM ++G D
Sbjct: 665 SLKKEMSEKGIAFD 678
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 297 TCEILVDGLCNEGR---VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+C +L++ L + GR V A L++ G P F + V+ G+ AL ++
Sbjct: 125 SCNLLLESLLSVGRHADVRAAFGLLV---AAGARPDTFAWNKAVQACVAAGDLDEALAML 181
Query: 354 DELWKKGNLP--SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+ + P + +I GL R KG +A + ++M+ G+ P+ +T+N +++
Sbjct: 182 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHV 241
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G RLR G P+ +TY++L+SG R R E L++EM +PD
Sbjct: 242 KGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGF 301
Query: 472 TYNSYMDGLSNARKS 486
TY+ DGL+ S
Sbjct: 302 TYSILFDGLTRTGDS 316
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-D 420
LPS+ +C L+E L + + + ++ G PD+ +N ++ G +A
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179
Query: 421 RLRLLASTKGL-DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
LR + ++G PD +Y+++++G R + + + +EM+D G P+ TYN+ +DG
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 168/353 (47%), Gaps = 16/353 (4%)
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP--SVSIY 193
S N C S G F N F ++D AF R+++ +P S +
Sbjct: 29 STNTCSISVKGNFGVS----------NEFENVKCLDD---AFSLFRQMVTTKPLPSAVSF 75
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+ L+ V + + + + + + R+ D + +++ C + DL + +
Sbjct: 76 SKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFK 135
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVL 312
KG N V+F TLIRG F E K + V++ +++ E CE V ++DGLC +G
Sbjct: 136 KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQ 195
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA +L+ + P Y +++ C +G A +++E+ +K P +I T+LI
Sbjct: 196 KAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLI 255
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL +L + + L +M+ I PD TFN +++ LC G+ DA+ + KG++
Sbjct: 256 DGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVE 315
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ +TY++++ GY + + + M+D+G PD+ +Y + ++G +K
Sbjct: 316 PNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKK 368
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 10/335 (2%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P E F + N++ D + F+ + + P +Y +++G K KA
Sbjct: 139 PYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAF 198
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M + KPD +NI+I FC++ D A L EM++K P+++++ +LI G
Sbjct: 199 DLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGL 258
Query: 271 FGERKFDEGVNMAYEMIELG-----CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
++++ + EMI L C F+SV +DGLC EG+V A E++ +G
Sbjct: 259 GKLSQWEKVRTLFLEMIHLNIYPDVCTFNSV-----IDGLCKEGKVEDAEEIMTYMIEKG 313
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P + Y +++ C G G A + D + KG P +I+ T LI G +K +A
Sbjct: 314 VEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAM 373
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ + G+ P VT + LL L +VGRT A G P+ T+ L+ GY
Sbjct: 374 QLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGY 433
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +E + +++ ++ Y + ++GL
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGL 468
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 45/351 (12%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ +R + G +P IYN++I+ F K D A + M + + PD++T+ LI
Sbjct: 197 AFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLID 256
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + +++ LF EM P+V +FN++I G E K ++ + MIE G E
Sbjct: 257 GLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEP 316
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ +T +++DG C G++ +A + +G+ P Y L+ + A+++
Sbjct: 317 NEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLF 376
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT----------- 402
E+ + G PS++ C+ L+ GL + + A ++M G +P+ T
Sbjct: 377 REISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKN 436
Query: 403 ------------------------FNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPD 434
+ ++ LC G+ A ++L L+ GL PD
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLI----GLHPD 492
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+TY ++SGY +E E ++++ +M D G +PD TYN + G + K
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +N +I+G K + + A M+ V+P+ +T+N+++ G+C + A +
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M +KG P+++S+ LI G+ ++K D+ + + E+ + G + S VTC +L+ GL
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A + G +P + + L+ G A+ +L ++ ++
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I GL + K +A EK+ G+ PD +T+ ++ C G +A +
Sbjct: 461 YTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
G PD TY+++V G+ R ++ E + + E+ + F + AT MD
Sbjct: 521 DNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 40/289 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ K ++ D A E M +I+ P+ YNV+++G+ + +A +D
Sbjct: 286 FNSVIDGLCKEGKVED---AEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFD 342
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++PD++++ LI+G+ KK D A+ LFRE+ + G P++V+ + L+RG F
Sbjct: 343 SMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVG 402
Query: 275 K-------FDEGV------NMAYEMIELGCEFSSVTCE---------------------- 299
+ FDE N+ LG F + E
Sbjct: 403 RTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+++GLC G++ KA G+ P Y ++ C EG A +++ ++
Sbjct: 463 AVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN 522
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
G LP ++ G R K E ++++ + ++ T L++
Sbjct: 523 GCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++ IY +ING K + DKA ++++ + PDV+T+ +ISG+C+ D A +
Sbjct: 457 NIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
R+M + GC P+ ++N ++RGFF K E E+ F + T E+L+D + +
Sbjct: 517 RKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAED 576
Query: 309 GRVL 312
+L
Sbjct: 577 PSLL 580
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+I+ +N K +++ FE + LI P V Y +I+G+ + D+A
Sbjct: 459 QIYTAVINGLCKNGKLDKAHATFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+M + PD T+N+++ GF R+ K +E+ K
Sbjct: 518 KMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGK 557
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 176/427 (41%), Gaps = 49/427 (11%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F++ A T S + T F + SL + F + V +S CP +FS
Sbjct: 174 FYLLARKGTFPSLK----TCNFXLSSLVKANEFEKCCEVFRVMSEGACP----DVFS--- 222
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKL------------IDG-------------- 186
F +NA K +M + + F M KL I+G
Sbjct: 223 ----FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 278
Query: 187 --------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
+P++ Y LING +K FDK D M+ P+VV FN LI G+C+
Sbjct: 279 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKM 338
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ AL + M K P V+ +L++GF + + N E++ G C
Sbjct: 339 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 398
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+V LC + R A R P D LV LC +G A E+ L +
Sbjct: 399 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 458
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG+ S + LI GL K EAS ++++ML+ G+ D +T+N L+ C+ G+
Sbjct: 459 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 518
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
RLR + +G+ PD TY+ L+ G + + L +E G I ++ TY M+
Sbjct: 519 CFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMME 578
Query: 479 GLSNARK 485
G A +
Sbjct: 579 GYCKANR 585
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI GF + + + M + ++PD+ T+N L+ G C K D A+ L+ E +
Sbjct: 503 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 562
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G N+ ++ ++ G+ + ++ N+ E++ E +S+ I++ C G V
Sbjct: 563 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVA 622
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ + +G+LP Y L+ +C G A ++DE+ K+G +P+V+ T LI
Sbjct: 623 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 682
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + A +M+ I P+ T+ +++ C +G A+ L + G+
Sbjct: 683 GGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIV 742
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
PD +TY++L +G+ + N + ++M EG D TY + + G +
Sbjct: 743 PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGWN 791
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 1/304 (0%)
Query: 181 RKLIDGRPSVSIY-NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R L G P+ + N LI+G + +A M+ + D +T+N LI GFC
Sbjct: 455 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
K + L EM ++G P++ ++N L+RG K D+ + + E G + T
Sbjct: 515 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 574
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I+++G C R+ L + + + Y +++ C GN AL++++ + K
Sbjct: 575 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G LP+ ++LI G+ + +A L+++M KEG +P+ V + L+ C +G+ A
Sbjct: 635 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTA 694
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + + P+ TY +++ GY + ++ NL+ +M + G +PD+ TYN +G
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNG 754
Query: 480 LSNA 483
A
Sbjct: 755 FCKA 758
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 2/279 (0%)
Query: 203 CREF--DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
C++F A F M+ +P + +L+ G C++ K A L+ + EKG +
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V+ N LI G G K E + EM+E G +T L+ G CNEG+V L +
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
++RG+ P + Y L+ LC G A+++ DE G + ++ ++EG + +
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+ L ++L + + +S+ +N +++ C G A +L +KG+ P+ TY
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L+ G ++ ++L++EM EGF+P++ Y + + G
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++F + +++D + ++ + LI ++ Y +++ G+ K + ++
Sbjct: 538 YNFLLRGLCNVGKLDDAIKLWDEFKASGLIS---NIHTYGIMMEGYCKANRIEDVENLFN 594
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ +++ + + +NI+I C+N AL L M+ KG PN ++++LI
Sbjct: 595 ELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH------ 648
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
G+CN G V A L+ + + G +P Y
Sbjct: 649 -----------------------------GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 679
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G A E+ P+ T +I+G +L +A+ L+ KM +
Sbjct: 680 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 739
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
GI+PD VT+N L C +A ++ +T+GL D +TY LV G+
Sbjct: 740 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 160/311 (51%), Gaps = 13/311 (4%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS N L+ V+ D A + +R RV PD TFNI+ISG C+ + A
Sbjct: 150 RPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGD 209
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY------EMIELGCEFSSVTCEI 300
+ ++MR G P+VV++NTLI G++ K+ M + EM + G + VT +
Sbjct: 210 VAKDMRGWGLMPSVVTYNTLIDGYY---KWGRAGKMYHVDMLLKEMNQAGISPNVVTFNV 266
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C E + A ++ + + G+ Y LV LC EG ++++V+E+ + G
Sbjct: 267 LINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG 326
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
L ++ +++ G + VEA G ++ M ++G+ P+ VT+N L++ +G+ +A
Sbjct: 327 -LATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEAT 385
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + KG+ PD TY+ L++G+T + L++EM + G DL TYN + L
Sbjct: 386 AAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGAL 445
Query: 481 ---SNARKSVR 488
RK+V+
Sbjct: 446 CCKGEVRKAVK 456
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 10/298 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR----NKKFDL 243
P +N++I+G K + KA M + P VVT+N LI G+ + K + +
Sbjct: 186 PDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHV 245
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+ L +EM + G +PNVV+FN LI G+ E + + EM + G + VT LV
Sbjct: 246 DM-LLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVS 304
Query: 304 GLCNEGRVLKACELVIDFSRRGV--LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
GLC EG+V + +LV + G+ LP ++ C +G A VD + +KG
Sbjct: 305 GLCREGKVEDSMKLVEEMEELGLATLP---TLNSVLNGFCKKGMMVEAEGWVDGMAQKGM 361
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V+ TLI+G +RL K EA+ M +GI PD T+NCL+
Sbjct: 362 KPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSG 421
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L G+ D +TY++L+ + ++ L++EM++ G P TYN+ ++G
Sbjct: 422 LLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIING 479
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 39/331 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALG---FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
PSV YN LI+G+ K K M + + P+VVTFN+LI+G+C+ A
Sbjct: 221 PSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAA 280
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ +F EMR+ G N+V++ +L+ G E K ++ + + EM ELG + T +++G
Sbjct: 281 IKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNG 339
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +G +++A V +++G+ P Y L++ G A + KG P
Sbjct: 340 FCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPD 399
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V LI G SGL+++M + G+ D VT+N L+ LC G A +L
Sbjct: 400 VKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLD 459
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRK-------------------------------- 452
GL+P TY+ +++G+ + K
Sbjct: 460 EMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMG 519
Query: 453 ---EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E ++NEML++G +P+ TY G+
Sbjct: 520 KMDEANVVLNEMLEKGLVPNRITYEIINSGM 550
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 2/258 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ + ++ D + E M +L G ++ N ++NGF K +A G+ D M +
Sbjct: 303 VSGLCREGKVEDSMKLVEEMEEL--GLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG 360
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+VVT+N LI G+ R K A M KG +P+V ++N LI GF +
Sbjct: 361 MKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVS 420
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E G + VT +L+ LC +G V KA +L+ + G+ PK Y ++
Sbjct: 421 GLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGF 480
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +G+A A ++ + K +V+ C ++ ++ K EA+ ++ +ML++G++P+
Sbjct: 481 CEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNR 540
Query: 401 VTFNCLLEDLCDVGRTVD 418
+T+ + + + G D
Sbjct: 541 ITYEIINSGMIEKGYVPD 558
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 14/348 (4%)
Query: 152 EMERIFHFAVNAFVKAN--RMNDGLLAFEAMRKLIDGRPSVS------------IYNVLI 197
EM+R++ +N + N +N + A+ M +++ VS Y LI
Sbjct: 197 EMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLI 256
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
G+ + + + A ++ M + + V++ +I G C + D + LF++MRE C
Sbjct: 257 LGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCY 316
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P V ++ +I FG + EG+++ EM E CE + T ++VD +C E ++ ++ +
Sbjct: 317 PTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRI 376
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + +G++P Y L+ C EG ALE++ + P+ LI G +
Sbjct: 377 LNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSK 436
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ +A L+ KML+ + P VT+N L+ C G A +L L GL PD T
Sbjct: 437 RKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWT 496
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y + + + R +E +L N + ++G + Y + +DG A K
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 11/372 (2%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R + ++ I+ L + R E S+ + + C P + R + ++A
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDC---------YPTV-RTYTVIIHALF 330
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+R +G+ F MR+ P+V Y V+++ K R+ D++ + M+ + P V
Sbjct: 331 GNDRNLEGMDLFNEMRER-SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N LI G+C + + AL + M C PN ++N LI GF + + + + +
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+E S VT L+ C G A +L+ G++P + Y ++ LC
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A ++ + L +KG + + T LI+G + K EA L+E+M E LP+S T+N
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L+ +C G+ + + S G+ P TY IL+ RE + N+M+ G
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629
Query: 466 FIPDLATYNSYM 477
PD+ TY +++
Sbjct: 630 HKPDVYTYTAFI 641
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ YN LI GF K + KA+ +M+ ++ P +VT+N LI C+ FD A
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L ++E G P+ +++ I ++ +E ++ + E G + + V L+DG C
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ +A L+ LP Y L+ +C EG L +V+ + K G P+V
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T LIE + R A+ + +M+ G PD T+ + C G +A+ +
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
G+ PD +TY +L+S Y R + N++ MLD G P +N+
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNN 709
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 3/326 (0%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
SC + V+A K ++++ + E M K + PSV YN LI G+ + +
Sbjct: 349 SCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL--VPSVVTYNALIRGYCEEGRIE 406
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
AL M + +P+ T+N LI GF + K A+ L +M E P++V++N+LI
Sbjct: 407 AALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
FD + + E G T + +D LC R+ +AC+L +G+
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
+ Y L++ C G A+ +++ + + LP+ +LI G+ + K E +
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM 586
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E M K G+ P T+ L+E++ G A+R+ + G PD TY + Y
Sbjct: 587 VENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCT 646
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATY 473
KE E ++ M++ G +PD TY
Sbjct: 647 SGNVKEAEGMMARMIEAGVMPDSLTY 672
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 153/335 (45%), Gaps = 15/335 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ ++R R +L + +N +C ER ++ + F K
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESN----------NCRPNERTYNELICGFSKRKH 439
Query: 170 MNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++ A + K+++ + PS+ YN LI+ K FD A D + + + PD T
Sbjct: 440 VHK---AMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWT 496
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+++ I C++K+ + A LF ++EKG N V + LI G K DE +++ M
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
C +S T L+ G+C EG+V + +V + S+ GV P Y L+E++ EG+
Sbjct: 557 SEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A V +++ G+ P V T I EA G+M +M++ G++PDS+T+ L+
Sbjct: 617 HANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLI 676
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+G DA + G DP ++ L+
Sbjct: 677 SAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 136/319 (42%), Gaps = 39/319 (12%)
Query: 196 LINGFVKCREFDKALGFYDRMVRD----RVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+I V + L F +M RD + K V ++N L+ R D ++ EM
Sbjct: 146 MIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEM 205
Query: 252 REKGCNPNVVSFNTLIRGF-----------FGERKFDEG--------------------V 280
PN+ + NT++ + + + F G V
Sbjct: 206 LNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDV 265
Query: 281 NMAYEMIEL----GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
N AY++ + GC + V+ ++ GLC GR+ + L P Y +
Sbjct: 266 NSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVI 325
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L G +++ +E+ ++ P+V T +++ + + RK E+ ++ +M+++G+
Sbjct: 326 IHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGL 385
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P VT+N L+ C+ GR A + L + P+ TY+ L+ G+++ +
Sbjct: 386 VPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445
Query: 457 LVNEMLDEGFIPDLATYNS 475
L+++ML+ P L TYNS
Sbjct: 446 LLSKMLESKLTPSLVTYNS 464
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 11/197 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ + +L S R E + N + + E ++ ++ KA
Sbjct: 493 DQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN----------EVMYTALIDGHCKA 542
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++++ + E M D P+ S YN LI G K + + L + M + VKP V T
Sbjct: 543 GKIDEAISLLERMHSE-DCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVAT 601
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ ILI R FD A +F +M G P+V ++ I + E M MI
Sbjct: 602 YTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMI 661
Query: 288 ELGCEFSSVTCEILVDG 304
E G S+T +L+
Sbjct: 662 EAGVMPDSLTYTLLISA 678
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 143/324 (44%), Gaps = 1/324 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C E F+ +N K + + M K R S YN LI G+ K +A
Sbjct: 268 CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAK-AGLRVSPYTYNPLICGYCKKGLLVEA 326
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L ++ MV V P V + N ++ GFC+ K A +M +K P+++S+NTLI G
Sbjct: 327 LALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYG 386
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F E + E+ F+ VT L+DGLC G + A +L D RG+ P
Sbjct: 387 FCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPD 446
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y LV C GN +A E DE+ G P A T I G +L +A L E
Sbjct: 447 VVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQE 506
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ML +G PD +T+N + LC +G +A L G PD +TY + +
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566
Query: 450 RRKEGENLVNEMLDEGFIPDLATY 473
+EG + +ML G P + TY
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTY 590
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 143/290 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS +NVLING K E +A G M + ++ T+N LI G+C+ AL L
Sbjct: 270 PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALAL 329
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM +G +P V S NT++ GF E K + +M++ ++ L+ G C
Sbjct: 330 WEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCR 389
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A L+ + R + Y L++ LC G+ AL++ +++ +G P V+
Sbjct: 390 LGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVT 449
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L+ G +L + A ++ML G+ PD + + +G T A +L+
Sbjct: 450 YTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEML 509
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
TKG PD +TY++ V+G + +E L+ +M+ +G +PD TY S+M
Sbjct: 510 TKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFM 559
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V+ +N ++ GF K + A M++ + PD++++N LI GFCR A L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E+R + + N+V++NTLI G + + + +MI G VT +LV+G C
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +L A E + G+ P F Y + G+ A ++ +E+ KG P VI
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVIT 519
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ GL +L EA L++KM+++G +PD VT+ + + G + +
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++G P +TY +L+ + R EM ++G +P++ TYN ++G RK
Sbjct: 580 SRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRK 637
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 7/332 (2%)
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAM---RKLIDGR--PSVSIYNVLINGFVKCREFD 207
MERI F + V + G L ++ + K++ R P V N ++
Sbjct: 162 MERIISFEMYGIVDV--LIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLV 219
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
KAL Y M ++P V T+N ++ FC+ + AL L +M+E+GC P+ V+FN LI
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G + + + + EM + G S T L+ G C +G +++A L + RGV
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + ++ C EG A + + ++ KK +P +I+ TLI G RL EA L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++++ + + VT+N L++ LC +G A +L+ +G+ PD +TY +LV+G +
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +EML G PD Y + + G
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG 491
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 134/297 (45%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++ YN LI+G + + + AL + M+ + PDVVT+ +L++G C+ +A F
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFF 470
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM G P+ ++ I G + + EM+ G +T + V+GLC
Sbjct: 471 DEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL 530
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + +A EL+ R G +P Y + G+ E+ ++ +G P+V+
Sbjct: 531 GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTY 590
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T LI + A +M ++G++P+ +T+N L+ C V + A + +
Sbjct: 591 TVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQE 650
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ P+ TY IL++ + +E L +ML + PD T+ + + L K
Sbjct: 651 KGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYK 707
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y VL+NG K A F+D M+ + PD + I G + A L
Sbjct: 445 PDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKL 504
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM KG P+V+++N + G +E + +MI G VT +
Sbjct: 505 QEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHME 564
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + + E+ D RG P Y L+ G A+ E+ +KG +P+VI
Sbjct: 565 NGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVIT 624
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G ++RK +A +M ++GI P+ T+ L+ + C++G+ +A RL
Sbjct: 625 YNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQML 684
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
K + PD T+ L+ ++ + + + + + +LD
Sbjct: 685 GKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILD 720
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 283 AYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
AY ++E F ++L+ G N C LV + R D + K+
Sbjct: 158 AYWVMERIISFEMYGIVDVLIGGYLN-----YQCLLVFEKMMRNRFLPDVKNCNRILKIL 212
Query: 342 GEGNAGI-ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ N + ALEV + + G P+V T++ + + A L+ KM + G P
Sbjct: 213 RDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSE 272
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VTFN L+ L G A L + GL TY+ L+ GY ++ E L E
Sbjct: 273 VTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332
Query: 461 MLDEGFIPDLATYNSYMDG------LSNARKSV 487
M+ G P +A++N+ M G +S+AR+ +
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQL 365
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 8/356 (2%)
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PS 189
N + A+ S F C ++ +++ + R++D + FE + I R P
Sbjct: 192 NLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFE---RWIQDRLYSPD 248
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V +NV+I G + + KAL +RM PD VT NI++ G CR + + R
Sbjct: 249 VWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLR 308
Query: 250 EMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
++ G C PNVV+F ++I G+ K ++ + + +M+ G ++VT +L++G
Sbjct: 309 RLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKV 368
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G + A E+ +R P + L++ C G AL + ++ + P+V
Sbjct: 369 GDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTF 428
Query: 369 TTLIEGLRRLRKGVEASGLMEKM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ +I L + + EA L+ ++ L+ I P + +N +++ LC G+ +A+ +R
Sbjct: 429 SIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGME 488
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG PD TY IL+ GY ++R E +EM++ G PD T N ++ L A
Sbjct: 489 EKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 544
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 7/284 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + V+ + N ++ G E +R+L DG P+V + +I+G+ K
Sbjct: 278 FGCSPDTVTHNIIVDGLCRTNEVSRG---HEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ + A+ Y+ MV + P+ VT+N+LI+G+ + A+ ++++M C P+VV+F+
Sbjct: 335 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 394
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + D+ + + +M + + + T I++ LC + R +A L+ + + R
Sbjct: 395 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454
Query: 325 -GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A + + +KG P T LI G + E
Sbjct: 455 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 514
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
A +M++ G PDS+T NC + L G + D + LAS
Sbjct: 515 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 558
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 4/291 (1%)
Query: 204 REFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
R+ D AL +D+M PD + L+S D + L + E GC +
Sbjct: 157 RQAD-ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYA 215
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDF 321
+N L+ G + + V + I+ V + +++ G+C G+V KA ELV
Sbjct: 216 YNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERM 275
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRK 380
+ G P + +V+ LC EV+ L + G +P+V+ T++I G + K
Sbjct: 276 NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 335
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A + M+ GI+P++VT+N L+ VG A + + PD +T+
Sbjct: 336 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSS 395
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
L+ GY R + + + ++M P++ T++ + L +S R
Sbjct: 396 LIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIR 446
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEA 384
+ P ++ LC G AL++ D++ G P + L+ +
Sbjct: 138 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDAS 197
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVS 443
+ L+ K + G ++ +N L+ L GR D L + PD ++++++
Sbjct: 198 ATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIK 257
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G R + ++ LV M + G PD T+N +DGL + R
Sbjct: 258 GVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSR 302
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 167/353 (47%), Gaps = 2/353 (0%)
Query: 133 NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI 192
N + A+ S F C ++ +++ + R++D + FE + P V
Sbjct: 197 NLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWS 256
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NV+I G + + KAL +RM PD VT NI++ G CR + + R ++
Sbjct: 257 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 316
Query: 253 EKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G C PNVV+F ++I G+ K ++ + + +M+ G ++VT +L++G G +
Sbjct: 317 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 376
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A E+ +R P + L++ C G AL + ++ + P+V + +
Sbjct: 377 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 436
Query: 372 IEGLRRLRKGVEASGLMEKM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
I L + + EA L+ ++ L+ I P + +N +++ LC G+ +A+ +R KG
Sbjct: 437 IHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 496
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD TY IL+ GY ++R E +EM++ G PD T N ++ L A
Sbjct: 497 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 549
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 7/284 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + V+ + N ++ G E +R+L DG P+V + +I+G+ K
Sbjct: 283 FGCSPDTVTHNIIVDGLCRTNEVSRG---HEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 339
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ + A+ Y+ MV + P+ VT+N+LI+G+ + A+ ++++M C P+VV+F+
Sbjct: 340 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 399
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + D+ + + +M + + + T I++ LC + R +A L+ + + R
Sbjct: 400 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLR 459
Query: 325 -GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A + + +KG P T LI G + E
Sbjct: 460 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 519
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
A +M++ G PDS+T NC + L G + D + LAS
Sbjct: 520 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 563
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 4/286 (1%)
Query: 204 REFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
R+ D AL +D+M PD + L+S D + L + E GC +
Sbjct: 162 RQAD-ALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYA 220
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCNEGRVLKACELVIDF 321
+N L+ G + + V + I+ V + +++ G+C G+V KA ELV
Sbjct: 221 YNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERM 280
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRK 380
+ G P + +V+ LC EV+ L + G +P+V+ T++I G + K
Sbjct: 281 NEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGK 340
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A + M+ GI+P++VT+N L+ VG A + + PD +T+
Sbjct: 341 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSS 400
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+ GY R + + + ++M P++ T++ + L +S
Sbjct: 401 LIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRS 446
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEA 384
+ P ++ LC G AL++ D++ G P + L+ +
Sbjct: 143 ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDAS 202
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVS 443
+ L+ K + G ++ +N L+ L GR D L + PD ++++++
Sbjct: 203 ATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIK 262
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G R + ++ LV M + G PD T+N +DGL + R
Sbjct: 263 GVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSR 307
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 156/341 (45%), Gaps = 29/341 (8%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGR------------PSVSIYNVLINGFVKCREFDKALG 211
FV N LL KL++GR P++ YN++++G + A
Sbjct: 325 FVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARR 384
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
D MV + V PD VT+ L+ G+C K A + EM KGC+PN + NTL+ +
Sbjct: 385 LMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLW 444
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV--LPK 329
E + E M +M E + +VTC I+V+GLC G + KA E+V + G L K
Sbjct: 445 KEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGK 504
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ GLV + N+P VI TTLI GL ++ K EA
Sbjct: 505 ENPVAGLVNSIHNVST---------------NVPDVITYTTLINGLCKVGKLEEAKKKFI 549
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M+ + + PDSVT++ + + C G+ A R+ G TY+ L+ G +
Sbjct: 550 EMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKG 609
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+ E L++EM + G PD+ TYN+ ++ L K+ T
Sbjct: 610 QIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDAT 650
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 7/304 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +N+LI + D A +D+M +P+ T IL+ GFCR + AL
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEF 208
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ G N N V +NTL+ F + DE + M E G VT + LC
Sbjct: 209 VDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCR 266
Query: 308 EGRVLKACELVIDFSRRGVL----PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G+V +A + D G L P + +++ C EG A +V+ + K GN
Sbjct: 267 AGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFV 326
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
S+ + T + GL R K +E ++++M++ GI P+ ++N +++ LC +DA RL
Sbjct: 327 SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLM 386
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL-SN 482
L + G+ PD +TY L+ GY + + E + ++NEM+ +G P+ T N+ ++ L
Sbjct: 387 DLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKE 446
Query: 483 ARKS 486
RKS
Sbjct: 447 GRKS 450
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 31/350 (8%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKC-REFDKALGF 212
+++ V++F K + ++ E M + L+ P V +N I+ + + F+ + F
Sbjct: 221 VYNTLVSSFCKQDMNDEAEKLVERMTEKGLL---PDVVTFNSRISALCRAGKVFEASRIF 277
Query: 213 YDRMVRDRV---KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
D + + KP+VVTFN+++ GFC+ + A L M++ G ++ S+NT + G
Sbjct: 278 RDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLG 337
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
K EG ++ EM+E G E + + I++DGLC +L A L+ GV P
Sbjct: 338 LLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD 397
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L+ C +G A +++E+ +KG P+ C TL+ L + + EA +++
Sbjct: 398 TVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQ 457
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD----------------- 432
KM ++ D+VT N ++ LC G A + T G +
Sbjct: 458 KMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHN 517
Query: 433 -----PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
PD +TY L++G + + +E + EM+ + PD TY++++
Sbjct: 518 VSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFV 567
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 12/307 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y LING K + ++A + M+ + PD VT++ + FC+ K AL +
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRV 582
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M GC+ + ++N+LI G + + E + EM E G T +++ LC
Sbjct: 583 LKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCE 642
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWK----KGNL 362
G+ A L+ + +GV+ + F L++ C G+ +A E+ D K L
Sbjct: 643 GGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEAL 702
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
S++ L G K +A L E L+ +L + + L++ LC GR DA L
Sbjct: 703 YSLMFNELLAGG-----KLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGL 757
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG D ++ ++ G ++ +++ + L M E + D + +Y +G S
Sbjct: 758 LQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIM--ELALEDKTSDRTYRNGNSI 815
Query: 483 ARKSVRQ 489
R+ + +
Sbjct: 816 FRRKLHK 822
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ + G P LI+ L A L +KM ++G P+ T L+ C G
Sbjct: 141 DMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAG 200
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
RT A L + G + + + Y+ LVS + +++ E E LV M ++G +PD+ T+N
Sbjct: 201 RTKQA--LEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFN 258
Query: 475 SYMDGLSNARKSVRQTR 491
S + L A K +R
Sbjct: 259 SRISALCRAGKVFEASR 275
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 4/311 (1%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ ++L+D P +YNV IN +F +A F M +KPD T+N +I
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR + AL L EM+ PN++++NTL+ G FG ++ + EM+ G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD-YFGLVEKLCGEGNAGIALEV 352
SS+T ++ C++ R L + ++ L D Y L++ LC G A V
Sbjct: 658 SSLTHRRVLQA-CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++E+ G P I LI G + A +ML + I P+ TFN LL L
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
VGR +A + + GL+P+ +TY IL +G+ +++ + E L EM+ +GF+P ++T
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836
Query: 473 YNSYMDGLSNA 483
YN+ + + A
Sbjct: 837 YNALISDFTKA 847
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 177/381 (46%), Gaps = 17/381 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+H T+ ++ SLA + R EL S+L + + G+ M+ + + A+ ++
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSR-------GVV----MDLVTYTALMDWLGK 356
Query: 168 NRMNDGL---LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
D + L F L P+ Y VLI+ K D+A M + P+
Sbjct: 357 QGKTDEVKDTLRFALSDNL---SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVTF+ +I+GF + D A R M+E+G NPNVV++ TLI GFF + D + + +
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+ G + + + LV+GL G++ +A L D S G+ +Y L++ L G
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ A + EL + LP + I L L K EA + +M G+ PD T+N
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
++ C G T A +L + P+ +TY+ LV+G ++ + L+NEM+
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 465 GFIPDLATYNSYMDGLSNARK 485
GF P T+ + S +R+
Sbjct: 654 GFSPSSLTHRRVLQACSQSRR 674
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N LI G+ + + AL DRM + DVV +N L++GFCR + D A G+ M+
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G +PNV ++ I + + +E ++ M+ G VT LV GLC +GR
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + G P Y L++ L G L ++ E+ +G + ++ T L+
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K E + L + + P+ VT+ L++ LC +A+++ L K +
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +++G+ + + M + G P++ TY + +DG
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L+ G + + D A DR DV+ +N LI+G+CR AL + M
Sbjct: 139 NTLLAGLCRNGQVDAAAALADRGGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G +VV +NTL+ GF + D + M E G + + T + C V +
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A +L R GVL LV LC +G A + E+ K G P+ + TLI+
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L + +G E L+ +M+ G++ D VT+ L++ L G+T + A + L P
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSP 377
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+TY +L+ + + E E ++ EM ++ P++ T++S ++G
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVING 423
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 40/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL-IDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V F +A +++ + M++ +D P+V+ Y I + + + ++A Y+
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVD--PNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR+ V DVVT + L++G CR+ +F A LFREM + G PN V++ TLI +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E +++ EM+ G VT L+D L +G+ + + + + P Y
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE- 394
L++ LC N A +V+ E+ +K P+V+ +++I G + R ++ + ++M+KE
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK-RGLLDKATEYKRMMKER 443
Query: 395 GILPDSVTFNCLLED-----------------LCDV------------------GRTVDA 419
GI P+ VT+ L++ LC+ G+ +A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L AS GL D + Y L+ G + E++D +PD YN +++
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 480 L 480
L
Sbjct: 564 L 564
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N FVK + D ++ M K P+V Y LI+GF K + D AL Y M
Sbjct: 417 FSSVINGFVKRGLL-DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + VK + + L++G +N K + A+ LF++ G + + V++ TLI G F
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E+++ +V + ++ LC G+ +A + + G+ P Y +
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL--------------------- 375
+ C +G AL+++ E+ P++I TL+ GL
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655
Query: 376 -------RRLRKGVEAS-------GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
RR+ + S + E M+ G+ D +N LL+ LC G T A
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ G+ PD +T++ L+ G+ + + +ML + P++AT+N+ + GL
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 482 N 482
+
Sbjct: 776 S 776
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 127/309 (41%), Gaps = 41/309 (13%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
A+ L RP+ YN+L+ + A M + V D VT N L++G CRN
Sbjct: 92 AIALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRN 148
Query: 239 KKFDLALGLFREMREKGCNP-NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L R G + +V+ +NTLI G+ +++A M G V
Sbjct: 149 GQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVG 206
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
LV G C G+V A RGVL D +
Sbjct: 207 YNTLVAGFCRAGQVDAA---------RGVL--------------------------DMMK 231
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+ G P+V T I R + EA L E M++ G+L D VT + L+ LC GR
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A L G P+ +TY L+ + R KE +L+ EM+ G + DL TY + M
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 478 DGLSNARKS 486
D L K+
Sbjct: 352 DWLGKQGKT 360
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 3/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V + R ++ F M K + P+ Y LI+ K + L MV
Sbjct: 281 VAGLCRDGRFSEAYALFREMDK-VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V D+VT+ L+ + K D R +PN V++ LI DE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E + VT +++G G + KA E RG+ P Y L++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
ALEV ++ +G + +L+ GLR+ K EA L + G+ D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V + L++ L G A + + + PD + Y++ ++ + KE ++ + E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + G PD +TYN+ + +S+ RK
Sbjct: 580 MRNMGLKPDQSTYNTMI--VSHCRK 602
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + ++ + R D L ++ M+ + D+ +N L+ C + A +
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM G P+ ++FN LI G D +M+ + T L+ GL +
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A ++I+ + G+ P + Y L + N A+ + E+ KG +P V
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
LI + +A L + M K G+ P S T++ L+ D+ R
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAR 884
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 150/345 (43%), Gaps = 41/345 (11%)
Query: 178 EAMRKLID------GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
EA+R L D P V YN ++ G + + + + MVR P+VVTFN L
Sbjct: 207 EALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTL 266
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNP--------------------------------- 258
I CRN F+ + +M + GC P
Sbjct: 267 IGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGL 326
Query: 259 --NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
NVV +NT+++G ++++ + EM + C VT ILVD C G V + E
Sbjct: 327 KPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIE 386
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
L+ G +P Y ++ C EG A+ ++ + G P+ I+ T +++GL
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ V+A LM +M+++G P+ VTFN ++ LC G A L G PD +
Sbjct: 447 SAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+Y ++ G + + E L+N M+++G P+ Y+S LS
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 551
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 146/296 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN ++ G +++A M + D VTFNIL+ FC+N +
Sbjct: 327 KPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIE 386
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E GC P+V+++ T+I GF E DE V + M GC ++++ I++ GLC
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ R + A +L+ +G P + ++ LC +G A+E++ ++ G P +I
Sbjct: 447 SAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ +T+I+GL + K EA L+ M+ +G+ P+++ ++ + L GR ++
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ D + Y+ ++S + + M+ G +P+ +TY + GL++
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLAS 622
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 6/332 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK---CREFDKALGFYDRMV 217
V A R+ D L + MR+ P +Y+V++ F A+ +
Sbjct: 122 VRALCARGRIADALSVLDEMRRR-GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLH 180
Query: 218 RDRVKPDVVTFNILISGFC-RNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERK 275
DV N++++ C + D AL L R++ GC+P+VVS+N +++G ++
Sbjct: 181 GRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKR 240
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ ++ EM+ +GC + VT L+ LC G + +++ G P Y
Sbjct: 241 WGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYAT 300
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ +C EG+ +A E++D + G P+V+ T+++GL + +A L+ +M
Sbjct: 301 VLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDND 360
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
D VTFN L++ C G L G PD +TY +++G+ +E E
Sbjct: 361 CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAV 420
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+ M G P+ +Y + GL +A + V
Sbjct: 421 MLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 127/291 (43%), Gaps = 8/291 (2%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN +++G+ + + A + V P+ T+ ++ C + AL + EMR
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 253 EKGCNPNVVSFNTLIRGFFGE---RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE- 308
+GC P ++ ++ F V + ++ GC C ++++ +C++
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 309 GRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G V +A L+ D + G P Y +++ LC G ++++E+ + G P+V+
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI L R ++ +M+ G PD + +L+ +C G A +
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ GL P+ + Y+ ++ G R ++ E L+ EM D D T+N +D
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVD 373
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 5/208 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + A R D A + M ++I+ P+ +N +IN K ++A+
Sbjct: 438 YTIVLKGLCSAERWVD---AEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLK 494
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ + PD+++++ +I G + K D AL L M KG +PN + ++++ E
Sbjct: 495 QMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEG 554
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + M + ++ +V ++ LC G +A E + G +P + Y
Sbjct: 555 RINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYT 614
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNL 362
L+ L EG A E++ EL KG L
Sbjct: 615 ILIRGLASEGFVKEAQEMLTELCSKGAL 642
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R + ++ +++ L S+ R+ + +++ + C F+ +N
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQ----------GCSPNPVTFNTVINFLC 481
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + + M L++G P + Y+ +I+G K + D+AL + MV + P+
Sbjct: 482 KKGLVEQAIELLKQM--LLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPN 539
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++ + S + + + + +F +++ + V +N +I D +
Sbjct: 540 TIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLA 599
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
M+ GC + T IL+ GL +EG V +A E++ + +G L K F +FG+V
Sbjct: 600 YMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHFMKHFGIV 653
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 177/381 (46%), Gaps = 17/381 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+H T+ ++ SLA + R EL S+L + + G+ M+ + + A+ ++
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSR-------GVV----MDLVTYTALMDWLGK 356
Query: 168 NRMNDGL---LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
D + L F L P+ Y VLI+ K D+A M + P+
Sbjct: 357 QGKTDEVKDTLRFALSDNL---SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVTF+ +I+GF + D A R M+E+G NPNVV++ TLI GFF + D + + +
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+ G + + + LV+GL G++ +A L D S G+ +Y L++ L G
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ A + EL + LP + I L L K EA + +M G+ PD T+N
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
++ C G T A +L + P+ +TY+ LV+G ++ + L+NEM+
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 465 GFIPDLATYNSYMDGLSNARK 485
GF P T+ + S +R+
Sbjct: 654 GFSPSSLTHRRVLQACSQSRR 674
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL DRM + DVV +N L++GFCR + D A G+ M+E G +PNV ++ I
Sbjct: 188 ALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIV 247
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ + +E ++ M+ G VT LV GLC +GR +A L + + G P
Sbjct: 248 YYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAP 307
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L++ L G L ++ E+ +G + ++ T L++ L + K E +
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTL 367
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
L + + P+ VT+ L++ LC +A+++ L K + P+ +T+ +++G+ +
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ M + G P++ TY + +DG
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 40/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL-IDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V F +A +++ + M++ +D P+V+ Y I + + + ++A Y+
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVD--PNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR+ V DVVT + L++G CR+ +F A LFREM + G PN V++ TLI +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E +++ EM+ G VT L+D L +G+ + + + + P Y
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE- 394
L++ LC N A +V+ E+ +K P+V+ +++I G + R ++ + ++M+KE
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK-RGLLDKATEYKRMMKER 443
Query: 395 GILPDSVTFNCLLED-----------------LCDV------------------GRTVDA 419
GI P+ VT+ L++ LC+ G+ +A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L AS GL D + Y L+ G + E++D +PD YN +++
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 480 L 480
L
Sbjct: 564 L 564
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N FVK + D ++ M K P+V Y LI+GF K + D AL Y M
Sbjct: 417 FSSVINGFVKRGLL-DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + VK + + L++G +N K + A+ LF++ G + + V++ TLI G F
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E+++ +V + ++ LC G+ +A + + G+ P Y +
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL--------------------- 375
+ C +G AL+++ E+ P++I TL+ GL
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655
Query: 376 -------RRLRKGVEAS-------GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
RR+ + S + E M+ G+ D +N LL+ LC G T A
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ G+ PD +T++ L+ G+ + + +ML + P++AT+N+ + GL
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 482 N 482
+
Sbjct: 776 S 776
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 141/369 (38%), Gaps = 72/369 (19%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ ++L+D P +YNV IN +F +A F M +KPD T+N +I
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR + AL L EM+ PN++++NTL+ G FG ++ + EM+ G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 294 SSVT-------CE----------------------------ILVDGLCNEGRVLKACELV 318
SS+T C L+ LC G KA ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGE----------------------------------- 343
+ G+ P + L+ C
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G G A V+ E+ K G P+ + L G + VEA L +M+ +G +P T+
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ D G A L +G+ P TY ILVSG++R E + + +M +
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897
Query: 464 EGFIPDLAT 472
+GF P T
Sbjct: 898 KGFSPSKGT 906
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 35/297 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P S YN +I + E KAL M +KP+++T+N L++G + A
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM G +P+ ++ +++ R+ D +++ M+ G L+ LC
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
Y G+ K A V++E+ G P I
Sbjct: 706 --------------------------YHGMTRK---------ATVVLEEMLGSGIAPDTI 730
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G + A +ML + I P+ TFN LL L VGR +A + +
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL+P+ +TY IL +G+ +++ + E L EM+ +GF+P ++TYN+ + + A
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++YN L+ KA + M+ + PD +TFN LI G C++ D A +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M + +PN+ +FNTL+ G + E + EM + G E +++T +IL G +
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQS 813
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++A L + +G +PK Y L+ G A E+ ++ K+G P+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ G R+R G E ++ M ++G P T + + G T A RL
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRL 926
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 3/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V + R ++ F M K + P+ Y LI+ K + L MV
Sbjct: 281 VAGLCRDGRFSEAYALFREMDK-VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V D+VT+ L+ + K D R +PN V++ LI DE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E + VT +++G G + KA E RG+ P Y L++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
ALEV ++ +G + +L+ GLR+ K EA L + G+ D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V + L++ L G A + + + PD + Y++ ++ + KE ++ + E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + G PD +TYN+ + +S+ RK
Sbjct: 580 MRNMGLKPDQSTYNTMI--VSHCRK 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 117/302 (38%), Gaps = 43/302 (14%)
Query: 220 RVKP-DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
R +P D + N L+ CR + A+ L R R P V++N L+
Sbjct: 67 RFRPADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAAL---SDHAH 118
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK------------------------- 313
+ EM + G F VT L+ GLC G+V
Sbjct: 119 APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLD 178
Query: 314 --------ACELVIDFSRRGVLPKDF-DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
A V D LP D Y LV C G A V+D + + G P+
Sbjct: 179 IAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPN 238
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V T I R + EA L E M++ G+L D VT + L+ LC GR +A L
Sbjct: 239 VATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFR 298
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ +TY L+ + R KE +L+ EM+ G + DL TY + MD L
Sbjct: 299 EMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQG 358
Query: 485 KS 486
K+
Sbjct: 359 KT 360
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y++L G K +A+ Y MV P V T+N LIS F + A L
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F++M+++G +P +++ L+ G+ R E +M E G S T +
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
Query: 308 EGRVLKACELVIDFSR 323
G +A L+ + R
Sbjct: 917 PGMTWQAQRLLKNLYR 932
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++ +++GF + + A ++D M + + D VT+ LI+G CR + A + +
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM +KG + + V++ LI G+ K E + +M++ + VT L DGLC +G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
V A EL+ + +G+ F Y L+ LC GN A+ + ++ + G P V T
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
T+I L + ++ A L+++ML +GI P VT+N L+ C GR RL K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ P+ TY+ L+ Y E K + ML + +P+ TYN + G AR
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 23/413 (5%)
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS--VLNFISANPC-- 140
HP FA A+ + + R +VR+L RF H V FIS
Sbjct: 144 HPHL----LQSFAVAAHLAAVRDPGAARAILVRAL----RFPSPHRHFVEQFISTYKAFS 195
Query: 141 --PCSNDGIFSC----PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-- 192
P S D + C P + R+ + ++ ++ L + +L P +
Sbjct: 196 SDPVSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCS 255
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+L+ A +D M PDVVT+ I++ G+C + + A+ L EM
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G N V++ ++I E + + V + +M+ G + ++ G C +G +
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A + +RG+ Y L+ LC G A V+ E+ KG + T LI
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G ++ K EA + KM+++ + P+ VT+ L + LC G A+ L +KGL+
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ TY+ L++G + ++ + +M + G PD+ TY + + L +++
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LING K ++A+ M +KPDV T+ +I C++K+ D A L +EM
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+KG P +V++N L+ GF + + G + M+E ++ T L+ C E +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
E+ + V+P + Y L++ C N AL E+ +KG + + LI
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
L + +K EA L EKM K+ + + +N
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKDRLTAEPDVYN 709
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ + K +M + AF K++ R P+V Y L +G K + A M
Sbjct: 432 IDGYCKVGKMTE---AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++ ++ T+N LI+G C+ + A+ +M E G P+V ++ T+I ++ D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM++ G + + VT +L++G C GRV L+ + + P Y L++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C E N E+ + + +P+ LI+G + R EA +M+++G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668
Query: 399 DSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ ++N L+ L + +A RL ++ +PD ++I +S E+ +
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLS--FNEDNLESTLA 726
Query: 457 LVNEMLDEGFIPDLA 471
L +E+++ + +A
Sbjct: 727 LCDELVEVTLVKSIA 741
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 219/493 (44%), Gaps = 80/493 (16%)
Query: 51 THLLR----FLKTHLLTPTNNQITPSSL--LHFLKS-----KLHHHPQFTHYDFHIFA-W 98
T LLR F+ L +P Q+ P L LHF +S L HPQ H+ + +
Sbjct: 80 TFLLRLSPAFVAAALRSP---QLAPHPLPSLHFFRSLPNATDLRAHPQ------HLLSCY 130
Query: 99 ASTIDSF-RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIF 157
S + SF R T R L + R + +VL+ ++ P S+ +
Sbjct: 131 VSLLHSFARSRETDAAGQARQLVAELR-AHGDAVLSHLT----PASSASLIR-------- 177
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
++ AF + + L A++AMR L PS YN L++G V D A+ +D M
Sbjct: 178 --SLAAFGLSEEL---LWAWQAMR-LAGVEPSRLTYNCLLDGLVNADLLDTAINVFDAMS 231
Query: 218 RD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERK 275
+ RV+PDVV++NILI G+CR + A+ +MRE P+ V++ TL++ + E
Sbjct: 232 TEHRVRPDVVSYNILIKGYCRAGRTQDAMARLADMREHAELAPDKVTYLTLMQRHYSEAT 291
Query: 276 FDEGVNMAYEMIE--LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
F + + + EM E +G E +++ L +G+ +A + S+RG Y
Sbjct: 292 FPQCIALFQEMEERGMGKEIPQHAYVLVIGALSKDGKPFEALAVFERMSKRGCPANAAMY 351
Query: 334 FGLVEKLCGEGN-------------AGIALE------VVDELWKKGNLPSVIAC------ 368
L++ + G GI L+ VV+ L + GNL +AC
Sbjct: 352 TALIDSMGKFGREKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVE 411
Query: 369 ----------TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
T+LI+G + +A L E+M+ +G +PDS +N L++ L GRT D
Sbjct: 412 KGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMVAKGFVPDSYCYNVLIDALVKAGRTDD 471
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A G D TY IL+ G +E++ +E + M+D+G P A + + +
Sbjct: 472 ACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRALSN 531
Query: 479 GLSNARKSVRQTR 491
GL + K R R
Sbjct: 532 GLCLSGKFSRAWR 544
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYD 214
+ VN + + + L F R ++ +V+ Y LI+GF K D+A ++
Sbjct: 386 YGVVVNCLCRFGNLEEALACF---RSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFE 442
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV PD +N+LI + + D A ++ M + GC+ V ++ LI G F E
Sbjct: 443 EMVAKGFVPDSYCYNVLIDALVKAGRTDDACAFYKRMEDDGCDQTVYTYTILIDGLFKEH 502
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K +E + MI+ G ++ L +GLC G+ +A ++ + + GV+P+ +
Sbjct: 503 KNEEALKFWDSMIDKGITPTAAAFRALSNGLCLSGKFSRAWRILDELAPMGVIPET-AHE 561
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRR 377
++ LC G A ++ D + +KG +P + T +I LR+
Sbjct: 562 DMINVLCKTGRFKQACKLADGIVQKGREIPGRVR-TMMINALRK 604
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 39/313 (12%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS-VSIYNVLINGFVKCREFDKALGF 212
+ + + A K + + L FE M K G P+ ++Y LI+ K +A+
Sbjct: 313 QHAYVLVIGALSKDGKPFEALAVFERMSK--RGCPANAAMYTALIDSMGKFGREKEAMAL 370
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++RM ++ D VT+ ++++ CR + AL FR EKG N + + +LI
Sbjct: 371 FERMKATGIELDAVTYGVVVNCLCRFGNLEEALACFRSCVEKGVAVNAIFYTSLI----- 425
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DG G V +A EL + +G +P +
Sbjct: 426 ------------------------------DGFGKTGMVDQAKELFEEMVAKGFVPDSYC 455
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L G A + G +V T LI+GL + K EA + M+
Sbjct: 456 YNVLIDALVKAGRTDDACAFYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDSMI 515
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+GI P + F L LC G+ A R+ + G+ P+ + +++ + R K
Sbjct: 516 DKGITPTAAAFRALSNGLCLSGKFSRAWRILDELAPMGVIPE-TAHEDMINVLCKTGRFK 574
Query: 453 EGENLVNEMLDEG 465
+ L + ++ +G
Sbjct: 575 QACKLADGIVQKG 587
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 35/329 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN ++ G + + + MVR P++VTFN LIS CRN F+ +
Sbjct: 225 PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 248 FREMREKGCNP-----------------------------------NVVSFNTLIRGFFG 272
+M E GC P NVV +NTL++G
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+++E + EM + C VT ILVD C G V + EL+ G +P
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVIT 404
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ C EG A+ ++ + G P+ I+ T +++GL + V+A LM +M+
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++G + +TFN L+ LC G A L G PD ++Y ++ G + +
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLS 481
E L+N M+++G P+ Y+S LS
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALS 553
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 177/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL ++ + C P++ R++ ++ K
Sbjct: 263 VTFNTLISYLCRNGLFERVHEVLAQMAEHGCT---------PDI-RMYATIIDGICKEGH 312
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN L+ G +++ M D VT
Sbjct: 313 LK---VAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M GC P+V+++ T+I GF E DE V + M
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++++ I++ GLC+ R + A +L+ ++G + L+ LC +G
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +G+ P+++ ++ +
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + + M+ G +
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 610 PNESTYTILIRGLAS 624
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 136/275 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+L++ F + D+ + ++M+ PDV+T+ +I+GFC+ D A+ L + M
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
GC PN +S+ +++G ++ + ++ +MI+ GC + +T L++ LC +G V
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL+ G P Y +++ L G ALE+++ + KG P+ I +++
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L R + + + + + I D+V +N ++ LC G T A + G
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
P+ TY IL+ G E KE + ++ E+ +G +
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 11/369 (2%)
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+A R +L S +A P P P F V A R+ D L +
Sbjct: 97 VAGYCRAGQLESARRLAAAVPVP---------PNAYTYFPV-VRALCARGRIADALAVLD 146
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
M + P +Y+V++ + F A+ + + DV N++++ C
Sbjct: 147 EMPRR-GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQ 205
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D AL L R++ GC P+VVS+N +++G +++ + EM+ + C + VT
Sbjct: 206 GSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTF 265
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+ LC G + E++ + G P Y +++ +C EG+ +A E+++ +
Sbjct: 266 NTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS 325
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+V+ TL++GL + E L+ +M + D VTFN L++ C G
Sbjct: 326 YGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDR 385
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L G PD +TY +++G+ +E E L+ M G P+ +Y +
Sbjct: 386 VIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLK 445
Query: 479 GLSNARKSV 487
GL +A + V
Sbjct: 446 GLCSAERWV 454
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 3/286 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN ++ G+ + + + A + V P+ T+ ++ C + AL + EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+GC P ++ ++ F V + ++ GC C ++++ +C++G V
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L+ D G P Y +++ LC G E+++E+ + P+++ TLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L R ++ +M + G PD + +++ +C G A + + GL
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
P+ + Y+ L+ G R +E E L+ EM D+ D T+N +D
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 104/229 (45%), Gaps = 14/229 (6%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
++ +++ L S+ R+ + +++ + CP + F+ +N K +
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLN----------PITFNTLINFLCKKGLV 488
Query: 171 NDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ + M L++G P + Y+ +I+G K + D+AL + MV + P+ + ++
Sbjct: 489 EQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+ S R + + + +F +++ + V +N +I + + + M+
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
GC + T IL+ GL +EG V +A E++ + +G L K +FG+V
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGIV 655
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 173/374 (46%), Gaps = 11/374 (2%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R + ++ ++ L + +LH L F + DG F P + R + V A
Sbjct: 252 RRNAVSYTNLIHGLCEA---GKLHEALEFWARM----REDGCF--PTV-RTYTVLVCALC 301
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ R + L F MR+ P+V Y VLI+ K D+AL + MV V P V
Sbjct: 302 ESGRELEALSLFGEMRER-GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSV 360
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
V FN LI +C+ + A+G+ M K PNV ++N LI GF + D + + +
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNK 420
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+E VT L+ GLC G V A L R G P + + + LC G
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR 480
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
G A ++++ L +K + A T LI+G + K A+ L ++ML E LP+S+TFN
Sbjct: 481 VGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNV 540
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+++ L G+ DA L + + P TY+ILV +E ++N ++ G
Sbjct: 541 MIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG 600
Query: 466 FIPDLATYNSYMDG 479
+ P++ TY +++
Sbjct: 601 YQPNVVTYTAFIKA 614
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 1/299 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R +VS Y LI+G + + +AL F+ RM D P V T+ +L+ C + + AL
Sbjct: 253 RNAVS-YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS 311
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EMRE+GC PNV ++ LI E + DE + M EM+E G S V L+ C
Sbjct: 312 LFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYC 371
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + A ++ + V P Y L+ C + A+ +++++ + P V+
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI GL + AS L M+++G PD TFN + LC +GR +A ++
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K + + Y L+ GY + + + +L ML E +P+ T+N +DGL K
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGK 550
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 5/325 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N++ K M L F + + G P + Y L+ G+ + + ++A G + M R
Sbjct: 196 LNSYCKLGNMAVARLFFVRILRCEPG-PDLFTYTSLVLGYCRNDDVERACGVFCVMPRR- 253
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ V++ LI G C K AL + MRE GC P V ++ L+ + E +
Sbjct: 254 ---NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEAL 310
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EM E GCE + T +L+D LC EGR+ +A +++ + +GV P + L+
Sbjct: 311 SLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSY 370
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A+ V+ + K P+V LI G R + A L+ KM++ + PD
Sbjct: 371 CKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDV 430
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ LC+VG A RL L G PD T++ + R R E ++
Sbjct: 431 VTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILES 490
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
+ ++ + Y + +DG A K
Sbjct: 491 LKEKHVKANEHAYTALIDGYCKAGK 515
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 71/391 (18%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + ++ K M D G+L +K+ P+V YN LI GF + + D+A+ +
Sbjct: 363 FNALIGSYCKRGMMEDAVGVLGLMESKKVC---PNVRTYNELICGFCRGKSMDRAMALLN 419
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT--------- 265
+MV ++ PDVVT+N LI G C D A LFR M G +P+ +FN
Sbjct: 420 KMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMG 479
Query: 266 --------------------------LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
LI G+ K + ++ M+ C +S+T
Sbjct: 480 RVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
+++DGL EG+V A LV D ++ V P Y LVE++ E + A E+++ L
Sbjct: 540 VMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS 599
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P+V+ T I+ + EA ++ K+ EG+L DS +N L+ +G A
Sbjct: 600 GYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSA 659
Query: 420 -DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN---------------------- 456
LR + T G +P +TY IL+ E +KEG N
Sbjct: 660 FGVLRRMFGT-GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKI 718
Query: 457 -------LVNEMLDEGFIPDLATYNSYMDGL 480
L +M + G +P+L TY+ ++GL
Sbjct: 719 DFGITTVLFEKMAECGCVPNLNTYSKLINGL 749
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 135/355 (38%), Gaps = 65/355 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K ++ D +L E M K D +P++ YN+L+ +K +FD+A +R+
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKF-DVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596
Query: 217 VRDRVKPDVVTFNILISGFCRNKKF----------------------------------- 241
+ +P+VVT+ I +C +
Sbjct: 597 ISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLL 656
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN-------------------- 281
D A G+ R M GC P+ ++++ L++ E+ EG N
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWS 716
Query: 282 ---------MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ +M E GC + T L++GLC GR+ A L G+ P +
Sbjct: 717 KIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEII 776
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L+ C G G A+ ++D + + +L + + LI GL +A + +L
Sbjct: 777 HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ G D V + L++ L G L L G TY +L+ R
Sbjct: 837 RCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 11/272 (4%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN---PNVVSFNTLIRGFFGERKFDE 278
K + ++N L+ R D + L++EM N PN+++ NT++ + + +
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYC--KLGNM 205
Query: 279 GVNMAYEMIELGCEFSS--VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
V + + L CE T LV G C V +AC + RR + Y L
Sbjct: 206 AVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV----SYTNL 261
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G ALE + + G P+V T L+ L + +EA L +M + G
Sbjct: 262 IHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGC 321
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ T+ L++ LC GR +A ++ KG+ P + ++ L+ Y + ++
Sbjct: 322 EPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVG 381
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
++ M + P++ TYN + G + R
Sbjct: 382 VLGLMESKKVCPNVRTYNELICGFCRGKSMDR 413
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 166/353 (47%), Gaps = 28/353 (7%)
Query: 159 FAVNAFVKA-NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDR 215
F N F+ A + N G LA+E +++ P Y++++ G K E DKA +
Sbjct: 39 FTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQ 98
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGER 274
+ VK +V+T++++I G C+ + D AL +F+ M GC P+VV+FN+L++G
Sbjct: 99 LRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGE 158
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + M + GCE + ++ L+DGLC GR+ +AC L + + +P Y
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM-EKMLK 393
V LC A + ++ KG+ +A +T+I L + EA M E + +
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278
Query: 394 EGIL----------------PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD----- 432
G+L P + FN L+ +C R D + L K +
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDG--VLLFQRMKSMKEFYCP 336
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ TY+I+V + + E + LVNEM + G PD+ TY++ +DGL K
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 7/313 (2%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDK 208
P +F+ ++A K+ R+ DG+L F+ M+ + + P++ YN++++ K ++ D+
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M + PDVVT++ L+ G C+ K D A L EM ++G P+ + +++
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
K D ++ M G VT L+DGLC GR+ +A + P
Sbjct: 418 ALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP 477
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
F Y ++ LC G A A + E+ K+G LP + +L++GL R G+E L
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA--RNGLEDLAL- 534
Query: 389 EKMLKEGIL-PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++LK + PD V +L+ LC G+ DA + + G D TY +VSG +
Sbjct: 535 -ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRK 593
Query: 448 ENRRKEGENLVNE 460
+ + LV++
Sbjct: 594 LGKVDKARQLVDD 606
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLAL 245
+ +V Y+V+I+G K D AL + M PDVVTFN L+ G C ++ A
Sbjct: 105 KLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAF 164
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
LF M + GC PNV+S++TL+ G + DE + EM+E C V V GL
Sbjct: 165 VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGL 224
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL-EVVDELWKKGNL-- 362
C RV +AC+ +G + ++ LC +G+A A ++++ L + G L
Sbjct: 225 CKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDE 284
Query: 363 --------------PSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
PS TLI + +RL GV M+ M + P+ T+N
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
++++LC + +A L + GL PD +TY LV G + + +L+ EM EG
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404
Query: 466 FIPDLATYNSYMDGLSNARK 485
PD T S ++ LS A K
Sbjct: 405 VFPDSFTDASILNALSKAGK 424
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 8/297 (2%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF---RE 250
N +I + D+A ++ M+ P FN LI C++K+ + LF +
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+E C PN+ ++N ++ ++ DE + EM G VT LVDGLC G+
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +AC+L+ + S+ GV P F ++ L G AL ++ + +G+ P ++ T
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L++GL + + EA + KM+ PD ++ ++ LC G+ A + +G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-PDLATYNSYMDGLSNARKS 486
+ PD + YH L+ G R E+L E+L PD + +DGL A K+
Sbjct: 510 VLPDTVLYHSLLDGLARNGL----EDLALELLKTSLCKPDFVMHKMVLDGLCKAGKA 562
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + S T +D L A E RRG P DF Y ++ LC G A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLE 408
E++ +L + G +VI + +I+G + + +A + + M G +PD VTFN LL+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC R +A L + G +P+ ++Y L+ G + R E L EM+++ +P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 469 DLATYNSYMDGLSNARK 485
DL Y S++ GL A +
Sbjct: 213 DLVAYTSFVTGLCKANR 229
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+KG SV ++ L + G A ++M + G PD T++ +L LC G
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD-EGFIPDLATYNSY 476
A L G+ + +TY +++ G + +R + + M G +PD+ T+NS
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150
Query: 477 MDGLSNARK 485
+ GL + +
Sbjct: 151 LKGLCSGER 159
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++ +++GF + + A ++D M + + D VT+ LI+G CR + A + +
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM +KG + + V++ LI G+ K E + +M++ + VT L DGLC +G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
V A EL+ + +G+ F Y L+ LC GN A+ + ++ + G P V T
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
T+I L + ++ A L+++ML +GI P VT+N L+ C GR RL K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ P+ TY+ L+ Y E K + ML + +P+ TYN + G AR
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKAR 649
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 177/413 (42%), Gaps = 23/413 (5%)
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS--VLNFISANPC-- 140
HP FA A+ + + R +VR+L RF H V FIS
Sbjct: 144 HPHL----LQSFAVAAHLAAVRDPGAARAILVRAL----RFPSPHRHFVEQFISTYKAFS 195
Query: 141 --PCSNDGIFSC----PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-- 192
P S D + C P + R+ + ++ ++ L + +L P +
Sbjct: 196 SDPVSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCS 255
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+L+ A +D M PDVVT+ I++ G+C + + A+ L EM
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G N V++ ++I E + + V + +M+ G + ++ G C +G +
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A + +RG+ Y L+ LC G A V+ E+ KG + T LI
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G ++ K EA + KM+++ + P+ VT+ L + LC G A+ L +KGL+
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ TY+ L++G + ++ + +M + G PD+ TY + + L +++
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LING K ++A+ M +KPDV T+ +I C++K+ D A L +EM
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+KG P +V++N L+ GF + + G + M+E ++ T L+ C E +
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMK 617
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
E+ + V+P + Y L++ C N AL E+ +KG + + LI
Sbjct: 618 STTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
L + +K EA L EKM KE + + +N
Sbjct: 678 RLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ + K +M + AF K++ R P+V Y L +G K + A M
Sbjct: 432 IDGYCKVGKMTE---AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++ ++ T+N LI+G C+ + A+ +M E G P+V ++ T+I ++ D
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM++ G + + VT +L++G C GRV L+ + + P Y L++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C E N E+ + + +P+ LI+G + R EA +M+++G
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRL 668
Query: 399 DSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ ++N L+ L + +A RL ++ +PD ++I +S E+ +
Sbjct: 669 TASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLS--FNEDNLESTLA 726
Query: 457 LVNEMLDEGFIPDLA 471
L +E+++ + +A
Sbjct: 727 LCDELVEVTLVKSIA 741
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 158/309 (51%), Gaps = 5/309 (1%)
Query: 178 EAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+AM+ L + R P + YNV++NG + D A+ F + +P+ V++NI++
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C ++++ A L EM +KGC PNVV+FN LI + + + + ++ + GC
Sbjct: 70 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+S++ L+ C + ++ KA + RG P Y L+ LC G +A+E+
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ +L KG P +I+ T+I+GL + K EA L+ +M+ +G+ PD +T++ + LC
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 249
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R DA R G+ P+ + Y+ ++ G + +L M+ G +P+ +T
Sbjct: 250 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNEST 309
Query: 473 YNSYMDGLS 481
Y ++GL+
Sbjct: 310 YTILIEGLA 318
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 143/281 (50%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+ +A+ D M PD+VT+N++++G C+ + D A+ + + GC PN VS+N
Sbjct: 8 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+++G ++++ + EM + GC + VT +L+ LC +G V A E++ + G
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y L+ C + A+ +D + +G P +++ TL+ L R + A
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+ ++ +G P +++N +++ L G+T +A L +KGL PD +TY + +G
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 247
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE+R ++ ++ D G P+ YN+ + GL R++
Sbjct: 248 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRET 288
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ VN + R++D A E ++ L P+ YN+++ G ++ A
Sbjct: 30 YNVVVNGICQEGRVDD---AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG 86
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+VVTFN+LIS CR + AL + ++ + GC PN +S+N L+ F ++
Sbjct: 87 EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQK 146
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ + M+ GC V+ L+ LC G V A EL+ +G P Y
Sbjct: 147 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 206
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKM 391
+++ L G ALE+++E+ KG P +I +T+ GL R+ + A G ++ M
Sbjct: 207 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 266
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
GI P++V +N ++ LC T A L G P+ TY IL+ G E
Sbjct: 267 ---GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 323
Query: 452 KEGENLVNEMLDEGFI 467
KE +L++E+ G +
Sbjct: 324 KEARDLLDELCSRGVV 339
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 130/245 (53%)
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C+ + A+ L EMR+KGC P++V++N ++ G E + D+ + + GCE ++
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
V+ I++ GLC R A EL+ + ++G P + L+ LC +G ALEV+++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ K G P+ ++ L+ + +K +A ++ M+ G PD V++N LL LC G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L KG P ++Y+ ++ G T+ + KE L+NEM+ +G PD+ TY++
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 476 YMDGL 480
GL
Sbjct: 243 IAAGL 247
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E + +L D P + YN +I+G K + +AL + MV ++PD++T++ +
Sbjct: 185 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 244
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G CR + + A+ F ++++ G PN V +N +I G R+ +++ MI GC
Sbjct: 245 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 304
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ T IL++GL EG + +A +L+ + RGV+ K G + L
Sbjct: 305 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 352
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 162/323 (50%), Gaps = 1/323 (0%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+M + A + +RK V +Y+ +I+ K + A Y M+ + P+V TF
Sbjct: 127 KMGETRAAMQMLRKTW-VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+IL+ C+++K A+ L M +KG PNVV++ ++ G+ + ++ +N+ M++
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G E + I+++GLC + RV +A L + + + P Y L++ LC G
Sbjct: 246 EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIST 305
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
+LE+VDE+ G +I +L+ L + +A L++++ +GI P+ T+ L++
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC GR DA + T+G TY+++++G ++ E L++ M D IP
Sbjct: 366 GLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIP 425
Query: 469 DLATYNSYMDGLSNARKSVRQTR 491
D +Y + + LS ++V+ +
Sbjct: 426 DAVSYETIIYALSEKGETVKTNK 448
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 5/277 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V+A K +R + AM +P+V Y +++G+ + +KAL ++ M
Sbjct: 185 FSILVDALCK-DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V++ V+P+V +NI+I+G C+ K+ D A+ LF+EM K NP+VV++N LI G K
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM +G +T L+ LC + +A LV + +G+ P Y L
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKE 394
++ LC +G A + E+ +G +V +I GL +KG+ EA L+ +M
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL--CKKGLFDEALALLSRMEDN 421
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+PD+V++ ++ L + G TV ++L +GL
Sbjct: 422 ACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 149/303 (49%), Gaps = 5/303 (1%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I P + +N ++ VK + A+ + ++ + +KP +VT IL++ +C
Sbjct: 4 ISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITF 63
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+ ++ + G PN ++F TLI+G + E + ++ G + V+ IL++
Sbjct: 64 LFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMN 123
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFD-YFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
GLC G A +++ R+ + D Y +++ LC A + E+ KG
Sbjct: 124 GLCKMGETRAAMQML----RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIF 179
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V + L++ L + RKG +A L+ M+K+G+ P+ VT+ +++ C V + A +
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ +G++P+ Y+I+++G ++ R E NL EM + PD+ TYN +DGL
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299
Query: 483 ARK 485
K
Sbjct: 300 LGK 302
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 16/309 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +++L++ K R+ +A+ M++ VKP+VVT+ ++ G+C + + AL +
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M ++G PNV +N +I G +++ DE +N+ EM VT IL+DGLC
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ + ELV + G Y L+ LC + A+ +V E+ +G P+V
Sbjct: 300 LGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+GL + + +A + +++L EG T+N ++ LC G +A L
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF------------IPDL----A 471
PD ++Y ++ + + + L+ M+ G I DL A
Sbjct: 420 DNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWA 479
Query: 472 TYNSYMDGL 480
Y S DG+
Sbjct: 480 AYASLEDGM 488
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 176/379 (46%), Gaps = 9/379 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH + ++ L + SE S++ + + S +F+ + J+
Sbjct: 8 TFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ + D + + R+ P + VL +K + F GFY+
Sbjct: 68 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYEE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M+ G + T +L++GLC E ++ A EL + +G++P +
Sbjct: 187 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A+E+ ++ + P +I TLI GL + +A L+++M +G
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ L++ C G A R + + D + Y L SG +E R + E
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAE 366
Query: 456 NLVNEMLDEGFIPDLATYN 474
++ EML G PD TY
Sbjct: 367 KMLREMLSVGLKPDARTYT 385
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D A+ Y +
Sbjct: 209 YSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 266
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ +++ TLI G E
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 326
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L GLC EGR + A +++ + G+ P Y
Sbjct: 327 LDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 386
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C +G+ +++ E+ + G++PSV+
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C +G+ +A V D + K G PSV++ TL+ G RL E
Sbjct: 133 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 192
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ML G+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+
Sbjct: 193 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 252
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + PDL TYN+ + GL
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 6/261 (2%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 63 RSDJYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 119
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 120 VWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMN 179
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ + + G P V + LI GL + K +A+ L ++ML +G++P
Sbjct: 180 GYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVP 239
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L+
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 299
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
+EM +G PD TY + +DG
Sbjct: 300 DEMSVKGLKPDKITYTTLIDG 320
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 169/365 (46%), Gaps = 45/365 (12%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D A + +RK IDGR P+V +Y+ +I+ K + +A G + M + DV
Sbjct: 176 KIGDTRGAIKLLRK-IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 234
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE------- 278
VT++ LI GFC K A+GL EM K NPNV ++N L+ E K E
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 279 ------------------GVNMAYEMIELGCEFSSV----------TCEILVDGLCNEGR 310
G + YE+ + F+++ T IL++G C
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L + ++ ++P Y L++ LC G +++DE+ +G VI ++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSS 414
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+GL + A L KM + I P+ TF LL+ LC GR DA + TKG
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL------SNAR 484
+ TY+++++G+ ++ +E ++++M D G IP+ T+ + + L A
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAE 534
Query: 485 KSVRQ 489
K +RQ
Sbjct: 535 KLLRQ 539
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 144/292 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +++ F K + + A+ R+ ++PD++T NILI+ FC + +
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ ++G P+ V+ NTLI+G + + + ++ +++ G + + V+ L++G+C
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A +L+ R P Y +++ LC A + E+ KG V+
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI G K EA GL+ +M+ + I P+ T+N L++ LC G+ +A + +
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ PD +TY L+ GY K+ +++ N M G PD+ TY ++G
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 141/276 (51%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ ++RM+ R P ++ FN ++ F + K + A+ L + KG P++++
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N LI F + G ++ ++++ G +VT L+ GLC +G+V KA
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+G Y L+ +C G+ A++++ ++ + P+V +T+I+ L + + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL +M +GI D VT++ L+ C G+ +A L K ++P+ TY+ILV
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E + KE ++++ ML PD+ TY++ MDG
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDG 313
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P N LI G + KAL F+D+++ + + V++ LI+G C+ A+ L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 186
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R++ + PNV ++T+I + E + EM G VT L+ G C
Sbjct: 187 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ +A L+ + + + P + Y LV+ LC EG A V+ + K P VI
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TL++G + + +A + M G+ PD T+ L+ C +A L
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + P +TY L+ G + R +L++EM D G D+ TY+S +DGL
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 5/277 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+A K ++ + M K +P V Y+ L++G+ E KA ++ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKAC-VKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDV T+ ILI+GFC+NK D AL LF+EM +K P +V++++LI G +
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ EM + G +T L+DGLC G + +A L + + P F + L
Sbjct: 391 PYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKE 394
++ LC G A EV +L KG +V +I G ++G+ EA ++ KM
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING--HCKQGLLEEALTMLSKMEDN 508
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G +P++ TF ++ L A++L +GL
Sbjct: 509 GCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + N+LIN F + ++++ PD VT N LI G C + AL
Sbjct: 91 QPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALH 150
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
++ +G N VS+ TLI G + + ++ + + ++D LC
Sbjct: 151 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 210
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V +A L + + +G+ Y L+ C EG A+ +++E+ K P+V
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++ L + K EA ++ MLK + PD +T++ L++ V A +
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
S G+ PD TY IL++G+ + E NL EM + +P + TY+S +DGL +
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ + + F M + P+V +N +I+G C +D+A F ++
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEE-AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 309
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++P ++T++IL+ G R K+ A + +EM +KG PNV+ +N LI F
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M+ G +S T L+ G C G+ A L+ + G +
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC AL V E+ + P TTLI GL + K +A L + L +G
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 489
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D+ T N LL LC+ G+ +A R++ +G D ++Y+ L+SG + + E
Sbjct: 490 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++EM+ G PD TY+ + GL N K
Sbjct: 550 MFLDEMVKRGLKPDNYTYSILICGLFNMNK 579
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 157/345 (45%), Gaps = 35/345 (10%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
M D L F L + P + LI+G K + KAL + + + D T N
Sbjct: 439 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+ G C K D A + +E+ +GC + VS+NTLI G G++K DE EM++
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF--------------- 334
G + + T IL+ GL N +V +A + D R G+LP + Y
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 618
Query: 335 --------------------GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
L+ C G +ALE+ +++ KG P+ T+LI+G
Sbjct: 619 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 678
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + + EA L E+M EG+ P+ + L++ +G+ V + L +K + P+
Sbjct: 679 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 738
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY +++ GY R+ E L+NEM ++G +PD TY ++ G
Sbjct: 739 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 783
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + N+L+ V+ EF K +D + + V PDV F I+ FC+ K + A+ L
Sbjct: 213 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKL 271
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M E G PNVV+FNT+I G ++DE +M+E G E + +T ILV GL
Sbjct: 272 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 331
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ A ++ + +++G P Y L++ G+ A+E+ D + KG +
Sbjct: 332 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 391
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L+++ML G + +F ++ LC A R
Sbjct: 392 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 451
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + P G L+SG + + + L + L++GF+ D T N+ + GL A K
Sbjct: 452 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 509
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
FD AL F M+ + P LISG C++ K AL L+ + KG + + N
Sbjct: 440 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 499
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G K DE + E++ GC V+ L+ G C + ++ +A + + +RG
Sbjct: 500 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 559
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P ++ Y L+ L A++ D+ + G LP V + +I+G + + E
Sbjct: 560 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 619
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++M+ + + P++V +N L+ C GR A LR KG+ P+ TY L+ G
Sbjct: 620 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 679
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +R +E + L EM EG P++ Y + +DG + V+
Sbjct: 680 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 722
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y++LI G + ++A+ F+D R+ + PDV T++++I G C+ ++ +
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 620
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F EM K PN V +N LIR + + + + +M G +S T L+ G+
Sbjct: 621 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 680
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---VDELWKKGNLP 363
RV +A L + G+ P F Y L++ G G G ++V + E+ K P
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTALID---GYGKLGQMVKVECLLREMHSKNVHP 737
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ I T +I G R EAS L+ +M ++GI+PDS+T+ + G ++A
Sbjct: 738 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---- 793
Query: 424 LLASTKGLDPDGMTYHILVSGYTR 447
KG D + Y ++ G+ +
Sbjct: 794 ----FKGSDEE--NYAAIIEGWNK 811
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 229 NILISGFCRNKKFD---LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
++LI +C K D LAL +F + KG P+ + N L+ +F + A++
Sbjct: 181 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFD 239
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
++ G ++ C G+V +A +L GV P + +++ L G
Sbjct: 240 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 299
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A +++ ++G P++I + L++GL R ++ +A ++++M K+G P+ + +N
Sbjct: 300 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 359
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ + G A ++ L +KGL TY+ L+ GY + + E L+ EML G
Sbjct: 360 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 419
Query: 466 FIPDLATYNS 475
F + ++ S
Sbjct: 420 FNVNQGSFTS 429
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLR-------------KGV------------ 382
+AL+V L KG PS C L+ L R KGV
Sbjct: 198 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 257
Query: 383 ---------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
EA L KM + G+ P+ VTFN +++ L GR +A + +G++P
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY ILV G TR R + ++ EM +GF P++ YN+ +D A
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 367
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ + A+ ++ R++ L E M+ K I P+ + Y LI G ++A ++
Sbjct: 636 VYNHLIRAYCRSGRLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLFE 693
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++P+V + LI G+ + + L REM K +PN +++ +I G+ +
Sbjct: 694 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 753
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
E + EM E G S+T + + G +G VL+A
Sbjct: 754 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 793
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + F K M F+A+ K RPSV +N LING++K + D+ M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKW-GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAM 197
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDV T++ILI+G C+ K D A LF EM + G PN V+F TLI G K
Sbjct: 198 HASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKV 257
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + +M+ G +T L+ GLC +G + + +L+ + G+ P Y L
Sbjct: 258 DLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTL 317
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ IALE L KM++E I
Sbjct: 318 IDGSCKEGDLEIALE-----------------------------------LRNKMIQESI 342
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D V + L+ LC GR DA+++ + GL PD TY ++++ + ++ K
Sbjct: 343 RLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASK 402
Query: 457 LVNEMLDEGFIPDLAT 472
L+ EM +G +P + T
Sbjct: 403 LLREMQRDGPLPGVVT 418
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 1/331 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F + A++++ + D + F ++ P + VL ++ R F FY
Sbjct: 68 VFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVL-EHLMEFRYFKLVWDFYKE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC+ + LA +F + + G P+VVSFNTLI G+
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M G + T IL++GLC EG++ +A EL + G++P +
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C +A+E+ ++ +G P +I TLI GL + + + L+++M+ G
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +++ L++ C G A LR + + D + Y L+S RE R + E
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAE 366
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ EML G PD TY ++ R S
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDS 397
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 1/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ N+L+ G V + D AL D M + PDVVT+ +++ +C + A L
Sbjct: 202 PNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 261
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ G P+ + L+ G+ K + + EM G + + VT ++++ C
Sbjct: 262 FDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCK 321
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG+ ++AC+L + G +P +V+ LC +G AG A E+ ++ KK P
Sbjct: 322 EGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTV 381
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI L + EA GL ++ L+ G +P +T+N L+ LC+ G +A R+
Sbjct: 382 VSTLIYWLCKNGMVQEARGLFDE-LERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMV 440
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ +P+ MTY L+ G+ + + EG L EM+ +G P Y + +D LS
Sbjct: 441 ERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSE 495
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P++++C L++GL + A ++++M GI+PD VT+ +L C G A +L
Sbjct: 202 PNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 261
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G PD Y +LV GY + ++ +++EM G P+ TY+ ++
Sbjct: 262 FDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCK 321
Query: 483 ARKSV 487
KS+
Sbjct: 322 EGKSI 326
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 177/381 (46%), Gaps = 17/381 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+H T+ ++ SLA + R EL S+L + + G+ M+ + + A+ ++
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSR-------GVV----MDLVTYTALMDWLGK 356
Query: 168 NRMNDGL---LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
D + L F L P+ Y VLI+ K D+A M + P+
Sbjct: 357 QGKTDEVKDTLRFALSDNL---SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN 413
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVTF+ +I+GF + D A R M+E+G NPNVV++ TLI GFF + D + + +
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+ G + + + LV+GL G++ +A L D S G+ +Y L++ L G
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ A + EL + LP + I L L K EA + +M G+ PD T+N
Sbjct: 534 DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYN 593
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
++ C G T A +L + P+ +TY+ LV+G ++ + L+NEM+
Sbjct: 594 TMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 465 GFIPDLATYNSYMDGLSNARK 485
GF P T+ + S +R+
Sbjct: 654 GFSPSSLTHRRVLQACSQSRR 674
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N LI G+ + + AL DRM + DVV +N L++GFCR + D A G+ M+
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G +PNV ++ I + + +E ++ M+ G VT LV GLC +GR
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + G P Y L++ L G L ++ E+ +G + ++ T L+
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K E + L + + P+ VT+ L++ LC +A+++ L K +
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +++G+ + + M + G P++ TY + +DG
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L+ G + + D A DR DV+ +N LI+G+CR AL + M
Sbjct: 139 NTLLAGLCRNGQVDAAAALADRGGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G +VV +NTL+ GF + D + M E G + + T + C V +
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A +L R GVL LV LC +G A + E+ K G P+ + TLI+
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L + +G E L+ +M+ G++ D VT+ L++ L G+T + A + L P
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSP 377
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+TY +L+ + + E E ++ EM ++ P++ T++S ++G
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVING 423
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 40/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL-IDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V F +A +++ + M++ +D P+V+ Y I + + + ++A Y+
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVD--PNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR+ V DVVT + L++G CR+ +F A LFREM + G PN V++ TLI +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E +++ EM+ G VT L+D L +G+ + + + + P Y
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE- 394
L++ LC N A +V+ E+ +K P+V+ +++I G + R ++ + ++M+KE
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK-RGLLDKATEYKRMMKER 443
Query: 395 GILPDSVTFNCLLED-----------------LCDV------------------GRTVDA 419
GI P+ VT+ L++ LC+ G+ +A
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L AS GL D + Y L+ G + E++D +PD YN +++
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC 563
Query: 480 L 480
L
Sbjct: 564 L 564
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N FVK + D ++ M K P+V Y LI+GF K + D AL Y M
Sbjct: 417 FSSVINGFVKRGLL-DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + VK + + L++G +N K + A+ LF++ G + + V++ TLI G F
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E+++ +V + ++ LC G+ +A + + G+ P Y +
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL--------------------- 375
+ C +G AL+++ E+ P++I TL+ GL
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655
Query: 376 -------RRLRKGVEAS-------GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
RR+ + S + E M+ G+ D +N LL+ LC G T A
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ G+ PD +T++ L+ G+ + + +ML + P++AT+N+ + GL
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775
Query: 482 N 482
+
Sbjct: 776 S 776
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 141/369 (38%), Gaps = 72/369 (19%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ ++L+D P +YNV IN +F +A F M +KPD T+N +I
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR + AL L EM+ PN++++NTL+ G FG ++ + EM+ G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 294 SSVT-------CE----------------------------ILVDGLCNEGRVLKACELV 318
SS+T C L+ LC G KA ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGE----------------------------------- 343
+ G+ P + L+ C
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G G A V+ E+ K G P+ + L G + VEA L +M+ +G +P T+
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ D G A L +G+ P TY ILVSG++R E + + +M +
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897
Query: 464 EGFIPDLAT 472
+GF P T
Sbjct: 898 KGFSPSKGT 906
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 35/297 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P S YN +I + E KAL M +KP+++T+N L++G + A
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM G +P+ ++ +++ R+ D +++ M+ G L+ LC
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
Y G+ K A V++E+ G P I
Sbjct: 706 --------------------------YHGMTRK---------ATVVLEEMLGSGIAPDTI 730
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G + A +ML + I P+ TFN LL L VGR +A + +
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL+P+ +TY IL +G+ +++ + E L EM+ +GF+P ++TYN+ + + A
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++YN L+ KA + M+ + PD +TFN LI G C++ D A +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M + +PN+ +FNTL+ G + E + EM + G E +++T +IL G +
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQS 813
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++A L + +G +PK Y L+ G A E+ ++ K+G P+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ G R+R G E ++ M ++G P T + + G T A RL
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRL 926
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 127/309 (41%), Gaps = 41/309 (13%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
A+ L RP+ YN+L+ + A M + V D VT N L++G CRN
Sbjct: 92 AIALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRN 148
Query: 239 KKFDLALGLFREMREKGCNP-NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L R G + +V+ +NTLI G+ +++A M G V
Sbjct: 149 GQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVG 206
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
LV G C G+V A RGVL D +
Sbjct: 207 YNTLVAGFCRAGQVDAA---------RGVL--------------------------DMMK 231
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+ G P+V T I R + EA L E M++ G+L D VT + L+ LC GR
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A L G P+ +TY L+ + R KE +L+ EM+ G + DL TY + M
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 478 DGLSNARKS 486
D L K+
Sbjct: 352 DWLGKQGKT 360
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 132/325 (40%), Gaps = 3/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V + R ++ F M K + P+ Y LI+ K + L MV
Sbjct: 281 VAGLCRDGRFSEAYALFREMDK-VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V D+VT+ L+ + K D R +PN V++ LI DE
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E + VT +++G G + KA E RG+ P Y L++
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
ALEV ++ +G + +L+ GLR+ K EA L + G+ D
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V + L++ L G A + + + PD + Y++ ++ + KE ++ + E
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + G PD +TYN+ + +S+ RK
Sbjct: 580 MRNMGLKPDQSTYNTMI--VSHCRK 602
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y++L G K +A+ Y MV P V T+N LIS F + A L
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F++M+++G +P +++ L+ G+ R E +M E G S T +
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
Query: 308 EGRVLKACELVIDFSR 323
G +A L+ + R
Sbjct: 917 PGMTWQAQRLLKNLYR 932
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 3/333 (0%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
NA +K D + +R+ + G P V Y+ LI + K REFD A M
Sbjct: 86 NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 145
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ VT+N+LI+G CR+ + A G ++M + G P+ ++ LI G R+ +E
Sbjct: 146 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 205
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM + + V L+DG EG +A +++ + GV P Y LV
Sbjct: 206 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 265
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G A ++ ++ + + P I +IEG R +A L+ +M GI P
Sbjct: 266 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ T++ ++ LC G A L +TKGL P+ Y L+SGY RE +
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 385
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++M +PDL YNS + GLS + T+
Sbjct: 386 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K+ R N+ + M + +P+V +Y LI+GF++ D+A MV
Sbjct: 194 INGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+P+ +T++ L+ G C+ + D A L ++M P+ +++N +I G F +
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAF 312
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G + T I++ GLC G KA +L+ + + +G+ P F Y L+
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EGN +A E+ D++ K LP + +LI GL ++ + E++ +M + G+LP+
Sbjct: 373 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 432
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T++ L+ G A++L GL P+ + Y L+ Y + + ++ +
Sbjct: 433 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 492
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
MLD+G + D Y + LS++
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSS 515
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 148/348 (42%), Gaps = 36/348 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A+ K + MR+ G +V+ YNVLI G + ++A GF M
Sbjct: 124 IEAYCKVREFDTAKKVLVEMRERGCGLNTVT-YNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD T+ LI+G C++++ + A L EM PNVV + LI GF E DE
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR----------------- 323
M EM+ G + + +T + LV GLC G++ +A L+ R
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302
Query: 324 ------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G+ P + Y ++ LC G A ++++E+ KG P+
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
LI G R A + +KM K +LPD +N L+ L VGR ++ +
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+GL P+ TY L+ GY + + E LV MLD G P+ Y
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 4/299 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALG--FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+P+ +Y LI+G+ CRE + +L +D+M + V PD+ +N LI G + + + +
Sbjct: 359 KPNAFVYAPLISGY--CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
F +M+E+G PN +++ LI G+ + + M++ G + + V L++
Sbjct: 417 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 476
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+ K +GV+ + Y L+ L GN A V+ E+ K G++P
Sbjct: 477 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPD 536
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V ++LI GL + +A G++++M K+G+ P+ V +N L++ LC G A +
Sbjct: 537 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 596
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KGL P+ +TY L+ G + L NEML G PD Y+ G S+A
Sbjct: 597 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 655
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 58/333 (17%)
Query: 206 FDKALGFYDRMVRDRVKPDVV-----------------TFNILISGFCRNKKFDLALGLF 248
F+ A G +M+R P VV ++L+ + ++ + A +
Sbjct: 11 FNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVV 70
Query: 249 REMREKG-------CN----------------------------PNVVSFNTLIRGFFGE 273
MR++G CN P+V +++TLI +
Sbjct: 71 LMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKV 130
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+FD + EM E GC ++VT +L+ GLC G V +A D G++P F Y
Sbjct: 131 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTY 190
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC + A ++DE+ P+V+ LI+G R EA ++++M+
Sbjct: 191 GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA 250
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD---PDGMTYHILVSGYTRENR 450
G+ P+ +T++ L+ LC +G+ DR LL D PD +TY++++ G+ R +
Sbjct: 251 AGVQPNKITYDNLVRGLCKMGQM---DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+K+ L++EM + G P++ TY+ + GL +
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 340
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F+ M K ++ P + YN LI G K +++ ++ +M + P+ T++ LI G+
Sbjct: 385 FDKMTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N + A L + M + G PN V + L+ +F ++ + M++ G +
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 503
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
IL+ L + G + A ++ + + G +P Y L+ LC + A ++DE+
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
KKG P+++ LI+GL + A + +L +G++P+ VT+ L++ C VG
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 623
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A L G+ PD Y +L +G + ++ L+ EM G ++++N+
Sbjct: 624 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNL 682
Query: 477 MDG 479
+DG
Sbjct: 683 VDG 685
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 127/288 (44%), Gaps = 3/288 (1%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +++++D +P+ IY L+ + K + +K + M+ V D + ILI
Sbjct: 451 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 510
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+ + A + E+ + G P+V +++LI G ++ + EM + G +
Sbjct: 511 NLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 570
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V L+DGLC G + A + +G++P Y L++ C G+ A +
Sbjct: 571 NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 630
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+E+ G P + L G +A L+E+M G S +FN L++ C
Sbjct: 631 NEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKR 689
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
G+ + +L + +GL P+ +T ++SG + + E + E+
Sbjct: 690 GKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y LI+G K + A Y+ M+ + PD +++L +G + A+ L
Sbjct: 605 PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFL 664
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM +G + ++ SFN L+ GF K E + + + ++ G +++T E ++ GL
Sbjct: 665 IEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 723
Query: 308 EGRVLKA-------------------CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G++ + L +D +G +P D ++ C EGN
Sbjct: 724 AGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV-VDDMIRDHCKEGNLDK 782
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
AL + D + K + +++ L R K EA L+++M K G L
Sbjct: 783 ALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 831
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 20/202 (9%)
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
A + + E M + G S+S +N L++GF K + + L ++ + P+ +
Sbjct: 655 AGDLEQAMFLIEEM--FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNAL 712
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T +ISG K +F E+++K F++L + K V
Sbjct: 713 TIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV------ 766
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ ++ C EG + KA L + Y +V+ LC +G
Sbjct: 767 -----------VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKL 815
Query: 347 GIALEVVDELWKKGNL-PSVIA 367
AL ++ E+ K+GNL P+++A
Sbjct: 816 SEALNLLKEMDKRGNLQPTLVA 837
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 144/296 (48%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V Y VLING K + A+G+ +M KP+VV ++ ++ G C++ AL L
Sbjct: 182 VYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCS 241
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM KG PN+V++ LI+G ++ E ++ EM+++G ILVD C EG
Sbjct: 242 EMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEG 301
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+V++A ++ G P F Y L+ C + A+ V + +G LP ++ T
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFT 361
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+LI G + + +A L+E+M K G +PD T+ L+ C GR + A L L
Sbjct: 362 SLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKY 421
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G P+ T +++ G +EN E +L M ++ Y+ +DG+ +A K
Sbjct: 422 GQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 2/315 (0%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPD 224
K +++ L F+ M ++ PSV + +L+ V+ + + A+ M ++ D
Sbjct: 53 KLKNIDEALDLFQGMARM-KPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEAD 111
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+T NI+I+ CR K + M + G P V++ TLI G + + V +A
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M ++ T +L++GLC G L A + R P Y +++ LC +G
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDG 231
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + E+ KG P+++ LI+GL + EA L+++M+K G+ PD N
Sbjct: 232 LVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLN 291
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G+ + A + G PD TY+ L+ Y +N+ E + + M+
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR 351
Query: 465 GFIPDLATYNSYMDG 479
G +PD+ + S + G
Sbjct: 352 GRLPDIVVFTSLIHG 366
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 144/305 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ Y LI G + +A D M++ ++PD+ NIL+ FC+ K A
Sbjct: 249 RPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKS 308
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M G P+V ++N+LI + + K +E + + + M+ G V L+ G C
Sbjct: 309 VIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWC 368
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ + KA L+ + S+ G +P + L+ C G A E+ + K G +P++
Sbjct: 369 KDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQ 428
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C +++GL + EA L + M K + + V ++ LL+ +C G+ A L
Sbjct: 429 TCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL + Y I++ G ++ + E+L+ M + G +P+ TYN ++ GL ++
Sbjct: 489 PGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEI 548
Query: 487 VRQTR 491
R +
Sbjct: 549 ARSIK 553
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP + + N+L++ F K + +A M+ PDV T+N LI +C K + A+
Sbjct: 284 RPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMR 343
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M +G P++V F +LI G+ ++ ++ +++ EM ++G T L+ G C
Sbjct: 344 VFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFC 403
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR L A EL ++ + G +P +++ LC E A+ + + K +++
Sbjct: 404 QAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIV 463
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ L++G+ K A L + +G+ + + +++ LC G A+ L +
Sbjct: 464 IYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINM 523
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G P+ TY++ V G + + M D+GF D AT ++ LS
Sbjct: 524 EENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLS 578
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 3/247 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ + N+MN+ + F M GR P + ++ LI+G+ K + +KA+ +
Sbjct: 325 YNSLIHIYCLQNKMNEAMRVFHLMVS--RGRLPDIVVFTSLIHGWCKDKNINKAMHLLEE 382
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + PDV T+ LI GFC+ + A LF M + G PN+ + ++ G E
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V++A M + + + V IL+DG+C+ G++ A EL +G+ + Y
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC +G+ A +++ + + G LP+ ++GL ++ + + M +G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Query: 396 ILPDSVT 402
D+ T
Sbjct: 563 FSVDAAT 569
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 3/261 (1%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N+ SG + K D AL LF+ M P+V F L+ + + +++ M
Sbjct: 47 NLCWSG--KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFS 104
Query: 289 -LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
LG E ++T I+++ LC V ++ + G+ P L+ LC +GN
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVA 164
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ + D + K V LI GL + + A G + KM + P+ V ++ ++
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G +A L + KG+ P+ +TY L+ G R KE +L++EM+ G
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284
Query: 468 PDLATYNSYMDGLSNARKSVR 488
PDL N +D K ++
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQ 305
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 190/414 (45%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ F K E A +D + + ++P V+FN L++G+ R
Sbjct: 125 EDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D L M+ G P+V +++ LI G E K D + EM++ G + VT
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P + TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ +E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K A+ L +ML G++P+ V
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKVTYTTLIDG 320
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C EG +A V D + K G P+ ++ TL+ G RL E
Sbjct: 133 PASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFR 192
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC + A+ L GL P+G+T+ L+ G+
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHC 252
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + PDL TYN+ + GL
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|91806015|gb|ABE65736.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 360
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 145/281 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K +FD + ++M + ++ T++I I+ FCR + LAL +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + E V + +M+E+G + +VT LV GL
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +G P Y ++ LC G +AL +++++ K V+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L KM +GI PD T+N L+ LC+ GR DA RL
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
K ++PD + ++ L+ + +E + E E L +EM+ P
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKRSIDP 353
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+G + MV+ R P +V F+ L+S + KFDL + L +M+ G + N+ +++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
I F + + + +M++LG S VT L++G C+ R+ +A LV
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + LV L A A+ +V+ + KG P ++ +I GL + + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM K I D V +N +++ LC DA L TKG+ PD TY+ L+S
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++ML++ PDL +N+ +D K V +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL G PS+ N L+NGF +A+ D+M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD VTF L+ G ++ K A+ L M KGC P++V++ +I G +
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M + E V ++DGLC + A +L +G+ P F Y L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ +K P ++ LI+ + K VEA L ++M+K I
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKRSI 351
Query: 397 LPDSV 401
P V
Sbjct: 352 DPSFV 356
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 3/333 (0%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
NA +K D + +R+ + G P V Y+ LI + K REFD A M
Sbjct: 213 NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 272
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ VT+N+LI+G CR+ + A G ++M + G P+ ++ LI G R+ +E
Sbjct: 273 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 332
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM + + V L+DG EG +A +++ + GV P Y LV
Sbjct: 333 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 392
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G A ++ ++ + + P I +IEG R +A L+ +M GI P
Sbjct: 393 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISP 452
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ T++ ++ LC G A L +TKGL P+ Y L+SGY RE +
Sbjct: 453 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 512
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++M +PDL YNS + GLS + T+
Sbjct: 513 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 158/323 (48%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K+ R N+ + M + +P+V +Y LI+GF++ D+A MV
Sbjct: 321 INGLCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 379
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+P+ +T++ L+ G C+ + D A L ++M P+ +++N +I G F +
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 439
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM G + T I++ GLC G KA +L+ + + +G+ P F Y L+
Sbjct: 440 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EGN +A E+ D++ K LP + +LI GL ++ + E++ +M + G+LP+
Sbjct: 500 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 559
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T++ L+ G A++L GL P+ + Y L+ Y + + ++ +
Sbjct: 560 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 619
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
MLD+G + D Y + LS++
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSS 642
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 148/348 (42%), Gaps = 36/348 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A+ K + MR+ G +V+ YNVLI G + ++A GF M
Sbjct: 251 IEAYCKVREFDTAKKVLVEMRERGCGLNTVT-YNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD T+ LI+G C++++ + A L EM PNVV + LI GF E DE
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR----------------- 323
M EM+ G + + +T + LV GLC G++ +A L+ R
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429
Query: 324 ------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G+ P + Y ++ LC G A ++++E+ KG P+
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
LI G R A + +KM K +LPD +N L+ L VGR ++ +
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+GL P+ TY L+ GY + + E LV MLD G P+ Y
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALG--FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+P+ +Y LI+G+ CRE + +L +D+M + V PD+ +N LI G + + + +
Sbjct: 486 KPNAFVYAPLISGY--CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
F +M+E+G PN +++ LI G+ + + M++ G + + V L++
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+ K +GV+ + Y L+ L GN A V+ + K G++P
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 663
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V ++LI GL + +A G++++M K+G+ P+ V +N L++ LC G A +
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KGL P+ +TY L+ G + L NEML G PD Y+ G S+A
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 58/333 (17%)
Query: 206 FDKALGFYDRMVRDRVKPDVV-----------------TFNILISGFCRNKKFDLALGLF 248
F+ A G +M+R P VV ++L+ + ++ + A +
Sbjct: 138 FNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVV 197
Query: 249 REMREKG-------CN----------------------------PNVVSFNTLIRGFFGE 273
MR++G CN P+V +++TLI +
Sbjct: 198 LMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKV 257
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+FD + EM E GC ++VT +L+ GLC G V +A D G++P F Y
Sbjct: 258 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTY 317
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ LC + A ++DE+ P+V+ LI+G R EA ++++M+
Sbjct: 318 GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA 377
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD---PDGMTYHILVSGYTRENR 450
G+ P+ +T++ L+ LC +G+ DR LL D PD +TY++++ G+ R +
Sbjct: 378 AGVQPNKITYDNLVRGLCKMGQM---DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 434
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+K+ L++EM + G P++ TY+ + GL +
Sbjct: 435 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 467
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 2/303 (0%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F+ M K ++ P + YN LI G K +++ ++ +M + P+ T++ LI G+
Sbjct: 512 FDKMTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N + A L + M + G PN V + L+ +F ++ + M++ G +
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 630
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
IL+ L + G + A ++ + G +P Y L+ LC + A ++DE+
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
KKG P+++ LI+GL + A + +L +G++P+ VT+ L++ C VG
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 750
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A L G+ PD Y +L +G + ++ L+ EM G ++++N+
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNL 809
Query: 477 MDG 479
+DG
Sbjct: 810 VDG 812
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 36/270 (13%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
IY +LI+ + A + ++ PDV ++ LISG C+ + A G+ EM
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+KG +PN+V +N L +DGLC G +
Sbjct: 691 SKKGVDPNIVCYNAL-----------------------------------IDGLCKSGDI 715
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A + +G++P Y L++ C G+ A + +E+ G P + L
Sbjct: 716 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 775
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
G +A L+E+M G S +FN L++ C G+ + +L + +GL
Sbjct: 776 TTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGL 834
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEM 461
P+ +T ++SG + + E + E+
Sbjct: 835 VPNALTIENIISGLSEAGKLSEVHTIFVEL 864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 128/344 (37%), Gaps = 90/344 (26%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFY 213
RI+ ++ + M + K +G P V +Y+ LI+G K + +KA G
Sbjct: 630 RIYGILIHNLSSSGNMEAAFRVLSGIEK--NGSVPDVHVYSSLISGLCKTADREKAFGIL 687
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG---- 269
D M + V P++V +N LI G C++ A +F + KG PN V++ +LI G
Sbjct: 688 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 747
Query: 270 -------FFGERKFDEGVN---MAYEMIELGCE--------------------FSSVTCE 299
+ G+ Y ++ GC S +
Sbjct: 748 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFN 807
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG--------------- 344
LVDG C G++ + +L+ RG++P ++ L G
Sbjct: 808 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867
Query: 345 -----------------NAG-IALEVVDEL----WKKGNLPSVI-------------ACT 369
N G I L+VVD++ K+GNL + C+
Sbjct: 868 TSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCS 927
Query: 370 T---LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+ +++ L R K EA L+++M K GI P LL +L
Sbjct: 928 SYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNL 971
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 19/223 (8%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y+VL G + ++A+ + M R + +FN L+ GFC+ K L L
Sbjct: 767 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL-RGHASISSFNNLVDGFCKRGKMQETLKL 825
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE-----FSSVTCEILV 302
+ +G PN ++ +I G K E + E+ + E FSS+ +++
Sbjct: 826 LHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMIN 885
Query: 303 DGL-------------CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G C EG + KA L + Y +V+ LC +G A
Sbjct: 886 QGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 945
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L ++ E+ K+G PS C L+ L E + +++ ML
Sbjct: 946 LNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 176/379 (46%), Gaps = 9/379 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCP------EMERIF 157
+FRH ++ ++ L + SE S++ + + S +F+ + I+
Sbjct: 10 TFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIY 69
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ + D + + + P + VL +K + F GFY+
Sbjct: 70 VFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVL-EHLMKLKYFKLVWGFYEE 128
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 188
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M+ G T +L++GLC E ++ A EL + +G++P +
Sbjct: 189 LDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTT 248
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A+E+ ++ + LP +I TLI GL + +A L+++M +G
Sbjct: 249 LIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKG 308
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T+ L++ C G A R + + D + Y L+SG +E R + E
Sbjct: 309 LKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAE 368
Query: 456 NLVNEMLDEGFIPDLATYN 474
++ EML G PD TY
Sbjct: 369 KMLREMLSVGLXPDAGTYT 387
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+ F+ M L+ G P+ + LI+G K D A+ Y +
Sbjct: 211 YSVLINGLCKESKMDGANELFDEM--LVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQ 268
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ ++ TLI G E
Sbjct: 269 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGD 328
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 329 LDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTM 388
Query: 336 LVEKLCGEGNAGIALEVVDEL 356
++ + C +G+ +++ E+
Sbjct: 389 IINEFCKKGDVWKGSKLLKEM 409
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 144 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 203
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD T++ L+ LC + A+ L KGL P+ +T+ L+ G+ + R
Sbjct: 204 XXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAM 263
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 264 EIYKQMLSQSLLPDLITYNTLIYGL 288
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R E + ++ + F
Sbjct: 65 RSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWG 124
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 125 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 184
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P V + LI GL + K A+ L ++ML +G++P+ V
Sbjct: 185 RLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXV 244
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L++EM
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 304
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 305 SXKGLKPDKFTYTTLIDG 322
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G E++L+ G FN L+ C G A +
Sbjct: 105 TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 164
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 165 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESK 223
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + K R++D + FE M+ + P V YN LIN F K + K L F+ M
Sbjct: 171 YNSMIDGYGKVGRLDDTVYFFEEMKSM-SCEPDVITYNTLINCFCKFGKLPKGLEFFREM 229
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +KP+VV+++ L+ FC+ AL + +MR G PN ++ +L+ +
Sbjct: 230 KQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNL 289
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +A EM ++G E++ VT L+DGLC+ R+ +A EL GV+P Y L
Sbjct: 290 SDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTAL 349
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N ALE++DE+ +G P ++ T I L L K A +M +M ++GI
Sbjct: 350 IHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGI 409
Query: 397 LPDS-----------------------------------VTFNCLLEDLCDVGRTVDA-D 420
++ VTF L++ LC A D
Sbjct: 410 KANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAID 469
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+++ GL + Y ++ G +E++ + L +M +G +PD Y S +DG
Sbjct: 470 YFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDG 528
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 157/330 (47%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F + ++ + + L F M++ P N L++ F + + D F+
Sbjct: 65 VFDALFSVLIEEDMFEEALQCFSKMKR-CRVFPKTRSCNGLLHKFARLGKTDGMKRFFKD 123
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ KP V T+NI+I C+ + A GLF EM+ +G P+ V++N++I G+ +
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ V EM + CE +T L++ C G++ K E + + G+ P Y
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV+ C E AL+ ++ + G +P+ T+L++ ++ +A L ++M + G
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ + VT+ L++ LCDV R +A+ L T G+ P+ +Y L+ G+ +
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM G PDL Y +++ L K
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEK 393
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 13/216 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ Y LI+GFVK + D+AL D M +KPD++ + I C +K + A +
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+EKG N + TL+ +F EG+++ EM+EL E ++VT +L+DGLC
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCK 460
Query: 308 EGRVLKACELVIDFSRR-----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
V KA ID+ R G+ Y +++ LC E A + +++ +KG +
Sbjct: 461 NKLVSKA----IDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLV 516
Query: 363 PSVIACTTLIEGLRRLRKG--VEASGLMEKMLKEGI 396
P A T+LI+G +L++G V+A L +KM + G+
Sbjct: 517 PDRTAYTSLIDG--KLKQGNVVQALALRDKMAEIGV 550
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
VLI+G K + KA+ ++ R+ D ++ + + +I G C+ + + A LF +M +
Sbjct: 453 VLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQ 512
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
KG P+ ++ +LI G + + + + +M E+G E
Sbjct: 513 KGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 135/288 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V Y +L+NG K ++A M + + V +N LI CR +K +AL
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM KGC P++ ++N+LI G + DE + + M+ G ++VT L+ L
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G KA LV D RG Y GL++ C GN LE+ +++ G I
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTI 601
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+C +I GL ++ K A + + G +PD VT+N +L LC VGR +A L
Sbjct: 602 SCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+G+ PD TY+ +S +E + ++ GF+P T+N
Sbjct: 662 QVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWN 709
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDR-MVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+ +I N LING+V + +A F + M+ +PD+ T+NIL+ G C+ A
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM +GC PNV+++ L+ G +E + +EM G +SV L+ LC
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ +V A L+ + +G P F Y L+ LC A + + G + + +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI L R +A L+ ML G D +T+N L++ C VG L
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL D ++ +I+++G + + + + ++ GF+PD+ TYNS ++GL
Sbjct: 592 IMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 187/464 (40%), Gaps = 34/464 (7%)
Query: 25 SIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHH 84
S P+ E+ P T L P L + K+H+L ITP L KL
Sbjct: 43 SDPIKMNVESEPATEWESLLEPF----DLTKLRKSHIL------ITPVQL-----CKLLE 87
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN 144
P IF + H + + L + +F + +L
Sbjct: 88 LPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLL-------MQMKE 140
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV--K 202
+GI E IF + + KA + + MR + P+ Y++++ V
Sbjct: 141 EGIVF---RESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGN 197
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
C + + FYD M+ V P V TF I++ C + D A L R+M + GC PN +
Sbjct: 198 CPQVATNV-FYD-MLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIV 255
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ TLI + + E + + EM +GC T ++ GLC ++ A +LV
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
RG P + Y L+ LC G A +++ ++ P+ TLI G +
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI----PCPNNAILNTLINGYVMSGQLK 371
Query: 383 EA-SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA S L E M+ G PD T+N L+ LC G A L S +G +P+ +TY IL
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
V+G + +E +++EM G + YN + L K
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEK 475
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 1/305 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ VN KA + + L M SV IYN LI + + AL M
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSV-IYNCLICALCRKEKVHVALNLLSEM 486
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
KPD+ T+N LI G C+ + D A LF M G N V++NTLI F
Sbjct: 487 CTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAF 546
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + +M+ GC +T L+ C G + K EL G+ +
Sbjct: 547 QKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIM 606
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A E + + +G +P ++ +++ GL ++ + EA L +++ EG+
Sbjct: 607 INGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGV 666
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+ T+N + C G DA G P +T+++LV +++ ++
Sbjct: 667 RPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFF 726
Query: 457 LVNEM 461
+++E+
Sbjct: 727 VLDEL 731
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI F K +K L Y++M+ D + D ++ NI+I+G C+ K D A R+
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G P++V++N+++ G + E +N+ + G + T + C EG V
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
AC G +P + + LV L + N V+DELW
Sbjct: 688 DACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 166 KANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + ++D LL+F M RK P + +++ L+ V+ + A+ + ++ + P
Sbjct: 32 KFHTVDDTLLSFNRMLRK--HPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPS 89
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ T ILI+ +C A L + + G PN+V+FNTLI GF + +
Sbjct: 90 IATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRL 149
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+++ G + L++GLC G+ A +L+ V P Y +++ LC +
Sbjct: 150 DLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDR 209
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + + +G L V+A +LI G + + EA+ L+ M++ I PD TFN
Sbjct: 210 LIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFN 269
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ LC GR V+A + + +G PD +TY+ L+ G+ N E L N M+
Sbjct: 270 ILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR 329
Query: 465 GFIPDLATYNSYMDG 479
G PD+ YN ++G
Sbjct: 330 GLEPDVLNYNVLING 344
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 143/298 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ +N LINGF KA+ F ++ D ++ LI+G C+N + AL
Sbjct: 122 QPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQ 181
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L ++M E PN+++++T+I G +R + + + + G V L+ G C
Sbjct: 182 LLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCC 241
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G+ +A L+ R + P D+ + LV+ LC EG A V + K+G P ++
Sbjct: 242 SVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIV 301
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L+EG EA L +M+K G+ PD + +N L+ C + +A L
Sbjct: 302 TYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI 361
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
K L P+ TY+ L+ G + R + LV+EM D G PD+ TYN ++D ++
Sbjct: 362 RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSK 419
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ +LIN + A +++ +P++VTFN LI+GFC N A+
Sbjct: 88 PSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAF 147
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++ KG + S+ +LI G + + + + +M E + +T ++DGLC
Sbjct: 148 RLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCK 207
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + A L + RG+L Y L+ C G A ++ + + P
Sbjct: 208 DRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYT 267
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++ L + + VEA G+ M+K G PD VT+N L+E C +A L
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+GL+PD + Y++L++GY + + E L E+ + +P+LATYNS +DGL
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ V+A K R+ + F M K + +P + YN L+ GF +A ++RM
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGE-KPDIVTYNALMEGFCLSNNVSEARELFNRM 326
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ ++PDV+ +N+LI+G+C+ D A+ LF+E+R K PN+ ++N+LI G +
Sbjct: 327 VKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRM 386
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ EM + G VT I +D C KA L + G+ P + Y +
Sbjct: 387 SCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVI 445
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
VE C IA E + L G P+V T +I L + EA L+ KM
Sbjct: 446 VENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDC 505
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
PD+VTF ++ L + T A++LRL +GL D
Sbjct: 506 PPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 1/297 (0%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V YN LI+G ++ +A MVR + PD TFNIL+ C+ + A G+F
Sbjct: 230 VVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFA 289
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
M ++G P++V++N L+ GF E + M++ G E + +L++G C
Sbjct: 290 VMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKID 349
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
V +A L + + ++P Y L++ LC G E+VDE+ +G P ++
Sbjct: 350 MVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYN 409
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
++ + + +A L +++ +GI PD ++ ++E+ C + A+
Sbjct: 410 IFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIH 468
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G P+ TY I+++ ++ E L+++M D PD T+ + + L ++
Sbjct: 469 GCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNET 525
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 72/320 (22%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D L ++RM+R P + F+ L+ R + A+ LF ++ KG P++ + L
Sbjct: 37 DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + + ++ ++++G + + VT L++G C G V KA +D +G
Sbjct: 97 INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+F Y L+ LC G AL+
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQ----------------------------------- 181
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG---------------- 430
L++KM ++ + P+ +T++ +++ LC DA RL L +++G
Sbjct: 182 LLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCC 241
Query: 431 -------------------LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
++PD T++ILV +E R E + + M+ G PD+
Sbjct: 242 SVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIV 301
Query: 472 TYNSYMDG--LSNARKSVRQ 489
TYN+ M+G LSN R+
Sbjct: 302 TYNALMEGFCLSNNVSEARE 321
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 77/191 (40%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+ + G A L +G+ P L+ C + + A ++ + K G
Sbjct: 61 LLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMG 120
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+++ TLI G +A ++ +G D ++ L+ LC G+T DA
Sbjct: 121 FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDAL 180
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+L + P+ +TY ++ G ++ + L + + G + D+ YNS + G
Sbjct: 181 QLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGC 240
Query: 481 SNARKSVRQTR 491
+ + TR
Sbjct: 241 CSVGQWREATR 251
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 167/339 (49%), Gaps = 19/339 (5%)
Query: 152 EMERIFHF---AVNAFVKANRMNDGLL------------AFEAMRKLID--GRPSVSIYN 194
E++++ HF V + N+++ G L A + +R + D RP+V +Y+
Sbjct: 95 EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+I+G K + ++A Y M + P+V+T+N LI FC + A L EM K
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
NP+V +F+ LI E K + + M+++G + + I+++GLC RV +A
Sbjct: 215 NINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
L+ + + ++P Y L++ LC G AL +++E+ +G V+ T+L++
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 332
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + + +A+ L KM + GI P T+ L++ LC GR +A L KG D
Sbjct: 333 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCID 392
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
TY +++SG +E E + ++M D G IP+ T+
Sbjct: 393 VWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN LI F + A M+ + PDV TF+ILI C+ K A +
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AKQI 240
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M + G NPNV S+N +I G ++ DE +N+ EM+ +VT L+DGLC
Sbjct: 241 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 300
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L+ + RG Y L++ LC N A + ++ ++G P++
Sbjct: 301 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 360
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+GL + + A L + +L +G D T+ ++ LC G +A ++
Sbjct: 361 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G P+ +T+ I++ ++ + E L++EM+ +G +
Sbjct: 421 DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 137/289 (47%), Gaps = 4/289 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREM 251
Y L+NG K E A+ RM+ DR +P+VV ++ +I G C++K + A L+ EM
Sbjct: 118 YGTLLNGLCKTGETRCAIKLL-RMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ PNV+++NTLI F + ++ +EMI T IL+D LC EG+
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK- 235
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A ++ + GV P + Y ++ LC A+ ++ E+ K +P + +L
Sbjct: 236 -NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+GL + + A LM +M G D VT+ LL+ LC A L + +G+
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P TY L+ G + R K + L +L +G D+ TY + GL
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 144/293 (49%), Gaps = 2/293 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + L+ G E K L F+D++V + + V++ L++G C+ + A+ L
Sbjct: 78 PNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKL 137
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R + ++ PNVV ++ +I G ++ +E ++ EM + +T L+ C
Sbjct: 138 LRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCL 197
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+++ A L+ + + + P + + L++ LC EG A ++ + + G P+V +
Sbjct: 198 AGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AKQIFHAMVQMGVNPNVYS 255
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+I GL + ++ EA L+ +ML + ++PD+VT+N L++ LC GR A L
Sbjct: 256 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 315
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G D +TY L+ + + L +M + G P + TY + +DGL
Sbjct: 316 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 368
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 4/258 (1%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF + ++I + P V +++LI+ C+E A + MV+ V P+V ++NI+I+
Sbjct: 204 AFSLLHEMILKNINPDVYTFSILIDAL--CKEGKNAKQIFHAMVQMGVNPNVYSYNIMIN 261
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C+ K+ D A+ L REM K P+ V++N+LI G + +N+ EM G
Sbjct: 262 GLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA 321
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT L+D LC + KA L + RG+ P + Y L++ LC G A E+
Sbjct: 322 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF 381
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
L KG V T +I GL + EA + KM G +P++VTF ++ L +
Sbjct: 382 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441
Query: 414 GRTVDADRLRLLASTKGL 431
A++L KGL
Sbjct: 442 DENDKAEKLLHEMIAKGL 459
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N ++ VK + + + +M ++ ++VT +ILI+ FC + + L ++
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G PN +++ TL++G + + + ++ +++ + + V+ L++GLC G
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A +L+ R P Y +++ LC + A ++ E+ + P+VI TLI
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ + A L+ +M+ + I PD TF+ L++ LC G+ +A ++ G++
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVN 250
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +Y+I+++G + R E NL+ EML + +PD TYNS +DGL +
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 301
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 15/380 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+H T+ ++ SLA + R EL S+L + + G+ M+ + + A+ ++
Sbjct: 308 NHVTYCTLIDSLAKAGRGKELLSLLGEMVSR-------GVV----MDLVTYTALMDWLGK 356
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
D + + +R + S++ Y VLI+ K D+A M + P+V
Sbjct: 357 QGKTDEVK--DTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNV 414
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTF+ +I+GF + D A R M+E+G NPNVV++ TLI GFF + D + + ++
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G E + + LV+GL G++ +A L D S G+ +Y L++ L G+
Sbjct: 475 MLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGD 534
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A + EL + LP + I L L K EA ++ +M G+ PD T+N
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNT 594
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
++ C G T A +L + P+ +TY+ LV+G ++ + L+NEM+ G
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654
Query: 466 FIPDLATYNSYMDGLSNARK 485
F P T+ + S +R+
Sbjct: 655 FSPSSLTHRRVLQACSQSRR 674
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 138/287 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N LI G+ + + AL DRM + DVV +N L++GFCR + D A G+ M+
Sbjct: 172 WNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMK 231
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G +PNV ++ I + + +E ++ M+ G VT LV GLC +GR
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + G +P Y L++ L G L ++ E+ +G + ++ T L+
Sbjct: 292 EAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L + K E + L + + + VT+ L++ LC +A+++ L K +
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS 411
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +++G+ + + M + G P++ TY + +DG
Sbjct: 412 PNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L+ G + + D A DR DV+ +N LI+G+CR AL + M
Sbjct: 139 NTLLAGLCRNGQVDAAAALADRGGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G +VV +NTL+ GF + D + M E G + + T + C V +
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A +L R GVL LV LC +G A + E+ K G +P+ + TLI+
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLID 317
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L + +G E L+ +M+ G++ D VT+ L++ L G+T + A + L
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSL 377
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+TY +L+ + + E E ++ EM ++ P++ T++S ++G
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVING 423
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 38/360 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL-IDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V F +A +++ + M++ +D P+V+ Y I + + + ++A Y+
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVD--PNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR+ V DVVT + L++G CR+ +F A LFREM + G PN V++ TLI +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGR 324
Query: 276 FDEGVNMAYEMIELGC-----------------------------------EFSSVTCEI 300
E +++ EM+ G + VT +
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTV 384
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+D LC V +A +++++ + + P + ++ G A E + ++G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+V+ TLI+G + + A + ML EG+ + + L+ L G+ +A
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L AS GL D + Y L+ G + E++D +PD YN +++ L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 35/297 (11%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P S YN +I + E KAL M +KP+++T+N L++G + A
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM G +P+ ++ +++ R+ D +++ M+ G L+ LC
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
Y G+ K A V++E+ G P I
Sbjct: 706 --------------------------YHGMTRK---------ATVVLEEMLGSGIAPDTI 730
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G + A +ML + I P+ TFN LL L VGR +A + +
Sbjct: 731 TFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL+P+ +TY ILV+G+ +++ + E L EM+ +GF+P ++TYN+ + + A
Sbjct: 791 EKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 141/369 (38%), Gaps = 72/369 (19%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ ++L+D P +YNV IN +F +A M +KPD T+N +I
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIV 597
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR + AL L EM+ PN++++NTL+ G FG ++ + EM+ G
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 294 SSVT-------CE----------------------------ILVDGLCNEGRVLKACELV 318
SS+T C L+ LC G KA ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGE----------------------------------- 343
+ G+ P + L+ C
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G G A V+ E+ K G P+ + L+ G + VEA L +M+ +G +P T+
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L+ D G A L +G+ P TY ILVSG++R E + + +M +
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKE 897
Query: 464 EGFIPDLAT 472
+GF P T
Sbjct: 898 KGFSPSKGT 906
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++YN L+ KA + M+ + PD +TFN LI G C++ D A +
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M + +PN+ +FNTL+ G + E + EM + G E +++T +ILV G +
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQS 813
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++A L + +G +PK Y L+ G A E+ ++ K+G P+
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ G R+R G E ++ M ++G P T + + G T A RL
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRL 926
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 127/309 (41%), Gaps = 41/309 (13%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
A+ L RP+ YN+L+ + A M + V D VT N L++G CRN
Sbjct: 92 AIALLRSSRPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRN 148
Query: 239 KKFDLALGLFREMREKGCNP-NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A L R G + +V+ +NTLI G+ +++A M G V
Sbjct: 149 GQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVG 206
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
LV G C G+V A RGVL D +
Sbjct: 207 YNTLVAGFCRAGQVDAA---------RGVL--------------------------DMMK 231
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+ G P+V T I R + EA L E M++ G+L D VT + L+ LC GR
Sbjct: 232 EAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A L G P+ +TY L+ + R KE +L+ EM+ G + DL TY + M
Sbjct: 292 EAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 478 DGLSNARKS 486
D L K+
Sbjct: 352 DWLGKQGKT 360
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y++L+ G K +A+ Y MV P V T+N LIS F + A L
Sbjct: 797 PNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F++M+++G +P +++ L+ G+ R E +M E G S T +
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
Query: 308 EGRVLKACELVIDFSR 323
G +A L+ + R
Sbjct: 917 PGMTWQAQRLLKNLYR 932
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 26/355 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFD 207
C E ++ ++ K R+N+ AF+ + L DG ++ + Y+ LI+G + R FD
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNE---AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ G+Y M+ + PDVV + I+I G + + AL M++KG P+ +NT++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ + + EM++ S T I++ GLC G V +A ++ + G
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKK---GNLPSVIACTTL-------IEGLRR 377
P Y L++ EG LE L+ K GN PS+ TL E LR+
Sbjct: 450 PTVMTYNALIDGFYREGR----LEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRK 505
Query: 378 LRKGVEASG-------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L + SG L+ ++ G++PD VT+N L+ LC A RL KG
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ PD +TY L+ G R +R + L +L G P L+ YNS M L +K
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 142/329 (43%), Gaps = 1/329 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P F V A A R D + AF M + RP+ +YN ++ V AL
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEF-QSRPTAFVYNTILKALVDSGVILLAL 192
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y+RMV P+ T+N+L+ G C+ AL +F EM ++G PNV + L+
Sbjct: 193 ALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K DE V + M + GC VT + GLC GRV +A + ++ G
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ L + ++ P V+ T +I G + +A ++
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K+G +PD+ +N +L+ LCD G A LR L D T I++ G +
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
E + +EM + G P + TYN+ +DG
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDG 461
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 20/285 (7%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + +A R+ D L + M+K P YN ++ + ++A
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKK-KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+++ + D T I+I G C+ D A+ +F EM E GC+P V+++N LI GF+ E +
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR 467
Query: 276 FDEGVNMAYEMIELG----------------CEFSSVTCEILVDGLCNEGRVLKACELVI 319
+E M + +E+G C+ S+ LV +C G+VLKA +L+
Sbjct: 468 LEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESL--RKLVHDMCQSGQVLKAYKLLR 524
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
GV+P Y L+ LC N A+ + EL KG P I TLI+GL R
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +A L + +L+ G P +N ++ LC + + A L L
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+ R G + +F L+ + + V M E ++ ++ L + G
Sbjct: 127 DARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSG 186
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+L A L G P Y L++ LC +G AG AL++ DE+ +G +P+V T
Sbjct: 187 VILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYT 246
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
L+ L K EA L+ M +G LPD VT+N L LC VGR +A + ++
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G Y L+ G + R EG ML+ PD+ Y + G + A
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%)
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G SS LV + GR A + P F Y +++ L G +A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + + + G P+ L++GL + +A + ++ML GI+P+ + LL
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC+ G+ +A +L KG PD +TY+ +SG + R E + + D GF
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 470 LATYNSYMDGLSNARK 485
L Y+ +DGL AR+
Sbjct: 312 LKGYSCLIDGLFQARR 327
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L++ + + KA ++ V PDVVT+N LI+G C+ + D A+ LF+E++ KG
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+P+ +++ TLI G + ++ + + +++ G S ++ LC ++ +A
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625
Query: 316 ELVIDFSRRGVLPKDFDY 333
L +D+ LPK +++
Sbjct: 626 NLWLDY-----LPKKYNF 638
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 1/311 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + R++D + E + G P+ YN+++ G ++ A + M
Sbjct: 19 YNVVLNGICQEGRVDDAMEFLENLPSY-GGEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 77
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
P+VVTFN+LIS CR + A+ + ++ + GC PN +S+N L+ F ++K
Sbjct: 78 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 137
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + M+ GC V+ L+ LC G V A +L+ +G P Y +
Sbjct: 138 DKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTV 197
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L G ALE++DE+ KG P +I TT+ GL R K EA K+ GI
Sbjct: 198 IDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGI 257
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P V +N +L LC T +A L + G P+ TY ILV G E KE +
Sbjct: 258 RPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARD 317
Query: 457 LVNEMLDEGFI 467
L+ ++ G +
Sbjct: 318 LLGQLCSRGVV 328
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 2/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YNV++NG + D A+ F + + +P+ V++NI++ G ++++ A L
Sbjct: 14 PDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKL 73
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLC 306
EM KGC PNVV+FN LI F R E E I + GC +S++ L+ C
Sbjct: 74 MEEMAHKGCPPNVVTFNMLI-SFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFC 132
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ ++ KA V RG P Y L+ LC G +A++++ +L KG P +I
Sbjct: 133 KQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLI 192
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ T+I+GL + K EA L+++M+ +G+ PD +T+ + LC + +A R
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G+ P + Y+ ++ G + +L + M+ G +P+ +TY ++GL+
Sbjct: 253 QDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLA 307
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%)
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ D M PD++T+N++++G C+ + D A+ + G PN VS+N +++G
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F ++++ + EM GC + VT +L+ LC G V A E++ + G P
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L+ C + A+ V+ + +G P +++ TL+ L R + A L+
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
++ +G P +++N +++ L G+T +A L +KGL PD +TY + SG RE+
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +E ++ D G P + YN+ + GL R++
Sbjct: 241 KIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRET 277
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN +I+G K + +AL D M+ ++PD++T+ + SG CR K + A+
Sbjct: 189 PVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRT 248
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++++ G P VV +N ++ G R+ +++ MI GC + T ILV+GL
Sbjct: 249 FCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAY 308
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EG V +A +L+ RGV+ K F G V+ L G
Sbjct: 309 EGLVKEARDLLGQLCSRGVVNKKFMKKGAVKMLDG 343
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +LI+G K + +A + M +PD++T+N L++G C + + A L
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F + ++G NV S+N LI G+ ++K DE + EM G + S+VT L+ LC
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV A +L ++ G K Y L++ LC G+ A+++ + K + P++
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ L++G+ R K EA +++ K G+ PD++ +N L+ LC+ G +A +L
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
KG PD +T+++++ +EN E L+ EM + F PD A
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAV 533
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 155/331 (46%), Gaps = 2/331 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + +N KA + + E M+ G V Y ++I+ K +AL +
Sbjct: 113 KTYGILINGLCKARKTGLAIKLHEKMKGNCKG--DVFTYGMIIDSLCKDGMTTEALDMFS 170
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDVV ++ L+ G CR + AL F+EM +G + +V ++N+LI G
Sbjct: 171 EMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAG 230
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E M++ G + T IL+DGLC EG+V +A +++ +G P Y
Sbjct: 231 LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN 290
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A ++ + L +G +V + LI G + +K EA L E+M +
Sbjct: 291 TLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK 350
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P +VT+N L+ LC GR A +L + T G TY +L+ G + +E
Sbjct: 351 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 410
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L + P++ ++ +DG+ A K
Sbjct: 411 IDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 7/300 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P L+ G A+ +D M + D T+ ILI+G C+ +K LA+
Sbjct: 74 EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M+ C +V ++ +I + E ++M EMI G V L+DGLC
Sbjct: 134 LHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---VDELWKKGNLP 363
GR+ +A E + RG+ + Y L+ G AG+ EV ++ + +G P
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIH---GLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
T LI+GL + K EA ++E M +G PD +T+N L+ LC VG+ DA +L
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +G+ + +Y+IL++GY ++ + E L EM +G P TYN+ + L +
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+PD VT L+ G A+ LF EM EKG + ++ LI G RK +
Sbjct: 74 EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ +E ++ C+ T +++D LC +G +A ++ + G+LP Y L++ LC
Sbjct: 134 L-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G ALE E+ +G V +LI GL R E + + M+ G PD+
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 252
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ LC G+ +A ++ L KG +PD +TY+ L++G + ++ L +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
D G ++ +YN ++G +K
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQK 336
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ K ++ + E M G+ P + YN L+NG + + A ++
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHH--KGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +K +V ++NILI+G+C+++K D A LF EMR KG P+ V++NTLI +
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371
Query: 276 FDEGVNMAYEMIELG--------CEFSSVTCE---------------------------I 300
+ EM G C C+ I
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+DG+C G++ +A + + S+ G+ P Y L+ LC +G A++++ ++ +KG
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
LP I +I+ L + + EA L+E+M PD + LL
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+G +PD +T LV G EN + L +EM ++G D TY ++GL ARK+
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
+ D F+AM++ RP+ YNVL++G + + + A Y ++ + P+ V F
Sbjct: 229 IGDAERLFDAMKE-AGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFT 287
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
LI GFC+ K+F A +FR+M G P V +N+L+ G F E +++ EM L
Sbjct: 288 TLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRL 347
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G TC I+V GLC+ G++ A + GV Y L+++ C GN A
Sbjct: 348 GLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEA 407
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + + G P+V++ ++LI+G +L K A + +M+ +GI P+ VT+ L+
Sbjct: 408 LATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 467
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
G A R G+ P+ +T +LV G RENR ++ V E
Sbjct: 468 HAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVME 518
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 147/332 (44%), Gaps = 18/332 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V A + +++ L F + L P++ N +++G VK R A +D M+R
Sbjct: 118 VIALSQMGLLDEALYVFRRLWTL----PALPACNAVLDGLVKARRSRCAWELFDEMLRRG 173
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI-----RGFFG--E 273
+ P VVT+N LI+ A ++ +M + +PNV+++ ++I G G E
Sbjct: 174 MVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAE 233
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R FD M E G + T +L+ G C V A L + G++P +
Sbjct: 234 RLFDA-------MKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVF 286
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C A ++ ++ + G P+V +L++G R EA L ++M +
Sbjct: 287 TTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTR 346
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ PD T + ++ LCD G+ A R G++ + Y+ L+ Y R +E
Sbjct: 347 LGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEE 406
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
M + G P++ +Y+S +DG S K
Sbjct: 407 ALATCTRMTEVGVEPNVVSYSSLIDGHSKLGK 438
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 20/253 (7%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ + YN LI+ + + ++AL RM V+P+VV+++ LI G + K +A+ ++
Sbjct: 387 NAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIY 446
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM KG PNVV++ LI G D EMIE G +++T +LVDGLC E
Sbjct: 447 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRE 506
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
RV A V++ S G+ D F E ++ +P+
Sbjct: 507 NRVQDAVRFVMEHS--GIKYSDIHSF--FSNFTTE--------------EEPLIPNSAIY 548
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TLI GL + EA L M K G++ DS T+ L+ C +G ++A L
Sbjct: 549 MTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMK 608
Query: 429 KGLDPDGMTYHIL 441
G+ P M Y I+
Sbjct: 609 IGVKP--MRYKII 619
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 7/331 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+++ +N+ K ++++ F M + L P+ Y++LI+ F K + D AL F
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLF---PNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M +K V ++ LISG C+ K A LF EM G PNVV + +LI G+ E
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + +EM G ++ T L+ GLC+ R+ +A +L + V+P + Y
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+E C EGN A E++DE+ +KG +P LI GL + EA M +
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
E + + F+ LL C GR DA D R + +G+ D + Y +L+ G R+ R+
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALDACREMLG-RGVAMDLVCYSVLIYGILRQQDRR 652
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+L+ +M D+G PD Y + +D + A
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKA 683
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 165/404 (40%), Gaps = 75/404 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
F + +V+ R DGL+ +R ++D P + + ++NG ++ R+F AL +D
Sbjct: 148 FDLLIQTYVQNRRELDGLVV---VRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+V ++PDV + ++ C K F A + M GC+ +V ++N IRG +
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264
Query: 275 K-----------------------------------FDEGVNMAYEMIELGCEFSSVTCE 299
+ F+ G M EMIE G S
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324
Query: 300 ILVDGL-----------------------------------CNEGRVLKACELVIDFSRR 324
LVDGL C +G++ +A L + +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P D Y L++ C G +AL + ++ + G +V ++LI G +L K A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L ++M+ G+ P+ V + L+ C G +A RL + KG+ P+ T+ L+SG
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
NR E L EM++ IP+ TYN ++G +VR
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 142/305 (46%), Gaps = 3/305 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V IY LI+G+ K E A Y M + P+ TF LISG C + A
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM E PN V++N LI G E + EM+E G + T L+ GLC
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ GRV +A E + D + + L+ C EG AL+ E+ +G ++
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLV 636
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ LI G+ R + L+++M +G+ PD+V + +++ G A L +
Sbjct: 637 CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM 696
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS---NA 483
++G P+ +TY L++G + + E L EML +P+ TY ++D L+ N
Sbjct: 697 VSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756
Query: 484 RKSVR 488
K+++
Sbjct: 757 EKAIQ 761
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 162/387 (41%), Gaps = 30/387 (7%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCP 151
R D + +VRSL F V+ + ++ C C N ++
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270
Query: 152 EMERIFHFA------------VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLI 197
E++ + + V K G E M ++I+ PS + + L+
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE---EMMNEMIEFGFVPSEAAVSNLV 327
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+G K A +++ + V P + +N LI+ C++ K D A LF M KG
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN V+++ LI F K D ++ +M E+G + + L+ G C G++ A L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ G+ P Y L+ C EG A + E+ KG P+ T LI GL
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA+ L +M++ ++P+ VT+N L+E C G TV A L KGL PD T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDE 464
Y L+SG R E +N++ E
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGE 594
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 2/319 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ ANRM + F M + + P+ YNVLI G K +A D M
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEW-NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V + PD T+ LISG C + A +++ + N + F+ L+ G+ E +
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRL 616
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ ++ EM+ G V +L+ G+ + +L+ +G+ P + Y +
Sbjct: 617 DDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTM 676
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ GN +A + D + +G LP+V+ T LI GL ++ +A L +ML
Sbjct: 677 IDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 736
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LP+ T+ C L+ L G A +L + +G + +TY+IL+ G+ + R +E
Sbjct: 737 LPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAE 795
Query: 457 LVNEMLDEGFIPDLATYNS 475
++ M+D G PD +Y++
Sbjct: 796 VLVNMIDSGISPDCISYST 814
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 1/287 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
++ L++G+ K D AL M+ V D+V +++LI G R + + L ++M
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ V + T+I + M+ GC + VT L++GLC G +
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L + LP Y ++ L EGN A+++ D L + G L + + LI
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILI 781
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + EA+ ++ M+ GI PD ++++ ++ + C G +A +L +G++
Sbjct: 782 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 841
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
PD + Y+ L+ G + L ++M+ G P+ ATYNS + G
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP +Y +I+ K A G +D MV + P+VVT+ LI+G C+ D A
Sbjct: 667 RPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAEL 726
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L REM PN ++ + E ++ + + ++E G ++VT IL+ G C
Sbjct: 727 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFC 785
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR+ +A E++++ G+ P Y ++ + C G+ A+++ + + +G P +
Sbjct: 786 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 845
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
A LI G + +A L + M++ G+ P+ T+N L+ C
Sbjct: 846 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 291 CEFSS-VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
C FS+ + ++L+ R L +V G+LP+ G++ L +A
Sbjct: 140 CNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMA 199
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + DE+ G P V T ++ L L+ + A ++ +M G T+N +
Sbjct: 200 LHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRG 259
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC R +A ++ L S KGL D TY LV G + + GE ++NEM++ GF+P
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPS 319
Query: 470 LATYNSYMDGL 480
A ++ +DGL
Sbjct: 320 EAAVSNLVDGL 330
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 7/357 (1%)
Query: 131 VLNFISANPCPCSNDGI------FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
VLN I C G+ F C ++ + A R D + M + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR-V 245
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P++ +N LI + F++ +M PD+ + +I G C+ ++A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M G PNVV +NT+++G ++ E + EM + C VT ILVD
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G V + EL+ G +P Y ++ C EG A+ ++ + G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ T +++GL + V+A LM +M+++G P+ VTFN L+ LC G A L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G PD ++Y ++ G + + +E L+N M+++G P+ Y+S LS
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL +S + C P++ R++ ++ K
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT---------PDI-RMYATIIDGICKEGH 301
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN ++ G + +A M + D VT
Sbjct: 302 LE---VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M GC P+V+++ T+I GF E DE V + M
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++V+ I++ GLC+ GR + A EL+ ++G P + L+ LC +G
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +GI P+++ ++ +
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + M+ G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 599 PNESTYTMLIKGLAS 613
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 147/294 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN ++ G + + D MVR P++VTFN LI CRN F+ + +M
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS 278
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E GC P++ + T+I G E + + M G + + V ++ GLC+ R
Sbjct: 279 EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWK 338
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL+ + ++ D + LV+ C G +E+++++ G +P VI TT+I
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + EA L++ M G P++V++ +L+ LC GR VDA+ L +G
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
P+ +T++ L++ ++ ++ L+ +ML G PDL +Y++ +DGL A K+
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V R+ D L + M P +Y+V++ + F ++ + M
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEM-SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D N++++ C D A+GL R++ GC ++VS+N +++G +++
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ + C + VT L+ LC G + E++ S G P Y +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ +C EG+ +A E+++ + G P+V+ T+++GL + EA L+ +M ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VTFN L++ C G L + G PD +TY +++G+ +E E
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+ M G P+ +Y + GL +A + V
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F K +++ ++ ++M +P+ Y +++ G + A +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSS-CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ VTFN LI+ C+ + A+ L ++M GC+P+++S++T+I G K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + M+ G +++ + L EGRV K ++ + + Y +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + G +P+ T LI+GL EA L+ ++ G
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632
Query: 397 L 397
L
Sbjct: 633 L 633
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ + ++ +++ L S+ R+ + +++ + CP F+ +N
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ----------GCPPNPVTFNTLINFLC 472
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + + M L++G P + Y+ +I+G K + ++AL + MV + P+
Sbjct: 473 KKGLVEQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++ + R + + + +F +++ + V +N +I + D ++
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGL 336
M+ GC + T +L+ GL +EG +A EL+ + RG L K +FG+
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 26/355 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFD 207
C E ++ ++ K R+N+ AF+ + L DG ++ + Y+ LI+G + R FD
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNE---AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ G+Y M+ + PDVV + I+I G + + AL M++KG P+ +NT++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ + + EM++ S T I++ GLC G V +A ++ + G
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKK---GNLPSVIACTTL-------IEGLRR 377
P Y L++ EG LE L+ K GN PS+ TL E LR+
Sbjct: 450 PTVMTYNALIDGFYREGR----LEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRK 505
Query: 378 LRKGVEASG-------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L + SG L+ ++ G++PD VT+N L+ LC A RL KG
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ PD +TY L+ G R +R + L +L G P L+ YNS M L +K
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 142/329 (43%), Gaps = 1/329 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P F V A A R D + AF M + RP+ +YN ++ V AL
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEF-QSRPTAFVYNTILKALVDSGVILLAL 192
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y+RMV P+ T+N+L+ G C+ AL +F EM ++G PNV + L+
Sbjct: 193 ALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K DE V + M + GC VT + GLC GRV +A + ++ G
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ L + ++ P V+ T +I G + +A ++
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K+G +PD+ +N +L+ LCD G A LR L D T I++ G +
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
E + +EM + G P + TYN+ +DG
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDG 461
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 18/284 (6%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + +A R+ D L + M+K G P YN ++ + ++A
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKK--KGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+++ + D T I+I G C+ D A+ +F EM E GC+P V+++N LI GF+ E
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466
Query: 275 KFDEGVNMAYEMIELGCEFS--------------SVTCEILVDGLCNEGRVLKACELVID 320
+ +E M + +E+G S S + LV +C G+VLKA +L+
Sbjct: 467 RLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRS 525
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
GV+P Y L+ LC N A+ + EL KG P I TLI+GL R +
Sbjct: 526 IIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHR 585
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+A L + +L+ G P +N ++ LC + + A L L
Sbjct: 586 ENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+ R G + +F L+ + + V M E ++ ++ L + G
Sbjct: 127 DARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSG 186
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+L A L G P Y L++ LC +G AG AL++ DE+ +G +P+V T
Sbjct: 187 VILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYT 246
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
L+ L K EA L+ M +G LPD VT+N L LC VGR +A + ++
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G Y L+ G + R EG ML+ PD+ Y + G + A
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%)
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G SS LV + GR A + P F Y +++ L G +A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + + + G P+ L++GL + +A + ++ML GI+P+ + LL
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC+ G+ +A +L KG PD +TY+ +SG + R E + + D GF
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311
Query: 470 LATYNSYMDGLSNARK 485
L Y+ +DGL AR+
Sbjct: 312 LKGYSCLIDGLFQARR 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR---------KLIDG----RPSVSI 192
G C ++ ++ F + R+ + + F M +L G R S S+
Sbjct: 444 GEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESL 503
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
L++ + + KA ++ V PDVVT+N LI+G C+ + D A+ LF+E++
Sbjct: 504 RK-LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQ 562
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +P+ +++ TLI G + ++ + + +++ G S ++ LC ++
Sbjct: 563 LKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLS 622
Query: 313 KACELVIDFSRRGVLPKDFDY 333
+A L +D+ LPK +++
Sbjct: 623 QAINLWLDY-----LPKKYNF 638
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 159/331 (48%), Gaps = 38/331 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKAL---GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
PSV+ YN LI+G+ K + K M++ + PDVVTFN+LI+G+C+ A
Sbjct: 221 PSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAA 280
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ +F+EMR++G NVV++N+L+ G E K ++ + + EM ELG T +++G
Sbjct: 281 IKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNG 340
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +G +++A V ++RG+ P Y LV+ G A D + KG P+
Sbjct: 341 FCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPN 400
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V LI G R SGL+++M ++G+ D VT+N L+ LC G A +L
Sbjct: 401 VKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLD 460
Query: 425 LASTKGLDPDGMTYHILVSGYT-------------RENRRKEGENLV------------- 458
GL+P + Y+ +++G+ R +RK+ N+V
Sbjct: 461 EMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMG 520
Query: 459 ---------NEMLDEGFIPDLATYNSYMDGL 480
NEML++G +P+ TY G+
Sbjct: 521 KMDEANVVLNEMLEKGLVPNRITYEIINSGM 551
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 167/332 (50%), Gaps = 14/332 (4%)
Query: 169 RMNDGLLAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
R + L A+EA L+ G RPS N L+ V+ D A + +R RV
Sbjct: 128 RASQPLAAYEAF--LLAGADCPRYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVS 185
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN- 281
PD+ TFNI+ISGFC+ + A + + + G P+V ++NTLI G+ + + +
Sbjct: 186 PDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHV 245
Query: 282 --MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EMI+ G VT +L++G C E + A ++ + ++G+ Y LV
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC EG ++++V+E+ + G + +++ G + VEA G ++ + + G+ P+
Sbjct: 306 LCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPN 365
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+T+N L++ +G+ +A + + KG+ P+ TY+ L++G+T + L++
Sbjct: 366 VITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLD 425
Query: 460 EMLDEGFIPDLATYNSYMDGL---SNARKSVR 488
EM ++G D+ TYN + L RK+V+
Sbjct: 426 EMKEKGVKADVVTYNVLIGALCCKGEVRKAVK 457
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 133/263 (50%), Gaps = 3/263 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV-SIYNVLINGFVKCREFDKALGFYDR 215
++ V+ + ++ D + E M +L G + S N ++NGF K +A G+ D
Sbjct: 299 YNSLVSGLCREGKVEDSIKLVEEMEEL--GLACILSTMNSVLNGFCKKGMMVEAEGWVDG 356
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + +KP+V+T+N L+ G+ R K A M KG +PNV ++N LI GF R
Sbjct: 357 IAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRD 416
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM E G + VT +L+ LC +G V KA +L+ + G+ PK Y
Sbjct: 417 WRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNT 476
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C +G+A A E+ + K+ +V+ ++ ++ K EA+ ++ +ML++G
Sbjct: 477 IINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKG 536
Query: 396 ILPDSVTFNCLLEDLCDVGRTVD 418
++P+ +T+ + + + G D
Sbjct: 537 LVPNRITYEIINSGMIEKGYVPD 559
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ V YNVLI E KA+ D MV ++P V +N +I+GFC A
Sbjct: 433 KADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHE 492
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M ++ NVV++N ++ F K DE + EM+E G + +T EI+ G+
Sbjct: 493 IRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMI 552
Query: 307 NEGRVLKACELVIDFSR 323
+G V D S+
Sbjct: 553 EKGYVPDISGYAADVSK 569
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 158/338 (46%), Gaps = 1/338 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E ++ ++ F + F+ M++ V+ Y LING + E +A
Sbjct: 364 EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT-YTTLINGLCRAGELKEAEKVL 422
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M+ R+ D VT+ +L+ G+C+ K A + M ++G PNVV++ L G +
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ +EM G E ++ T L++GLC G + +A + D G+ P + Y
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G A +++ E+ G P+++ L+ G + L+E ML+
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ I P++ T+N L++ C + ++ ++P+ TY+IL+ G+ + KE
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ NEM+++GF ++Y++ + L+ +K V +
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARK 700
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 149/332 (44%), Gaps = 7/332 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM---RKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
++ V R++D L E M + ++D ++Y +++GF + A +
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDE----AVYTTVLSGFCNKGDLVSARRW 386
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M R + D VT+ LI+G CR + A + +EM + + + V++ L+ G+
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K E + M++ G + VT L DGLC +G V A EL+ + S +G+
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ LC G A+ + ++ G P V TTLI+ L + + A L+++ML
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
GI P VT+N L+ C GR +L K + P+ TY+ L+ Y N K
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ M P+ TYN + G AR
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKAR 658
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 160/366 (43%), Gaps = 9/366 (2%)
Query: 121 SSYRFSELHSVLNFISANPCPCSNDGIFSC----PEMERIFHFAVNAFVKANRMNDGLLA 176
S +R H + + + + P S D + C P + R+ + ++ +A L
Sbjct: 187 SPHRHFVEHYISTYKAFSSDPASFDLLLLCLPSAPLLRRVRQYGISPSPEACNAVLSRLP 246
Query: 177 FEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
+ +L G P +V YN+L+ + A +D M PDVVT+ ILI G
Sbjct: 247 LDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHG 303
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+C + + A+ L +M +G PN + +++ + + + + + +M+
Sbjct: 304 YCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILD 363
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
++ G CN+G ++ A + R+G+ Y L+ LC G A +V+
Sbjct: 364 EAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQ 423
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
E+ + + T L++G + K EA + M++ G+ P+ VT+ L + LC G
Sbjct: 424 EMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A+ L S KGL+ + TY+ L++G + + + +M G PD+ TY
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543
Query: 475 SYMDGL 480
+ +D L
Sbjct: 544 TLIDAL 549
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 130/260 (50%), Gaps = 3/260 (1%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+V ++NIL+ C + + A LF EM P+VV++ LI G+ + + V +
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLL 317
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M+ G E ++ +V LC++GRV A +V D V+ + Y ++ C +
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A DE+ +KG + TTLI GL R + EA ++++ML + D VT+
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ C G+ +A ++ +G+ P+ +TY L G ++ + L++EM +
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 464 EGFIPDLATYNSYMDGLSNA 483
+G + TYNS ++GL A
Sbjct: 498 KGLELNACTYNSLINGLCKA 517
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LING K D+A+ M +KPDV T+ LI C++ + D A L +EM
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P +V++N L+ GF + + G + M+E ++ T L+ C +
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
E+ R V P + Y L++ C + A +E+ +KG + + + LI
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
L + +K VEA L M KEG + +N
Sbjct: 687 RLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 40/327 (12%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALG 211
E + V+ + K +M + AF+ ++ P+V Y L +G K + A
Sbjct: 434 EVTYTVLVDGYCKRGKMAE---AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANE 490
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
M ++ + T+N LI+G C+ D A+ +M G P+V ++ TLI
Sbjct: 491 LLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALC 550
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ D ++ EM++ G + + VT +L++G C GRV +L+ + + P
Sbjct: 551 KSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNAT 610
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+++ C N E+ + + P+ LI+G + R EA +M
Sbjct: 611 TYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEM 670
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+++G RL AS +Y L+ ++ +
Sbjct: 671 IEKG--------------------------FRLTAS---------SYSALIRLLNKKKKF 695
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMD 478
E L ++M EGF + YN Y+D
Sbjct: 696 VEARKLFHDMRKEGFTAEPDVYNFYID 722
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 166/353 (47%), Gaps = 28/353 (7%)
Query: 159 FAVNAFVKA-NRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDR 215
F N F+ A + N G LA+E +++ P Y++++ G K E DKA +
Sbjct: 39 FTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQ 98
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGER 274
+ VK +V+T++++I G C+ + D AL +F+ M GC P+VV+FN+L++G
Sbjct: 99 LRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGE 158
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + M + GCE + ++ L+DGLC GR+ +AC L + + +P Y
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM-EKMLK 393
V LC A + ++ KG+ +A +T+I L + EA M E + +
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278
Query: 394 EGIL----------------PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD----- 432
G+L P + FN L+ +C R D + L K +
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDG--VLLFQRMKSMKEFYCP 336
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ TY+I+V + + E + LVNEM + G PD+ TY++ +DGL K
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 146/318 (45%), Gaps = 21/318 (6%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+V Y+V+I+G K D AL + M PDVVTFN L+ G C ++ A L
Sbjct: 107 NVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVL 166
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M + GC PNV+S++TL+ G + DE + EM+E C V V GLC
Sbjct: 167 FEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCK 226
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL-EVVDELWKKGNL---- 362
RV +AC+ +G + ++ LC +G+A A ++++ L + G L
Sbjct: 227 ANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEAC 286
Query: 363 ------------PSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
PS TLI + +RL GV M+ M + P+ T+N ++
Sbjct: 287 KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
++LC + +A L + GL PD +TY LV G + + +L+ EM EG
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF 406
Query: 468 PDLATYNSYMDGLSNARK 485
PD T S ++ LS A K
Sbjct: 407 PDSFTDASILNALSKAGK 424
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 149/313 (47%), Gaps = 7/313 (2%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDK 208
P +F+ ++A K+ R+ DG+L F+ M+ + + P++ YN++++ K ++ D+
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M + PDVVT++ L+ G C+ K D A L EM ++G P+ + +++
Sbjct: 358 AQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILN 417
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
K D ++ M G VT L+DGLC GR+ +A + P
Sbjct: 418 ALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTP 477
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
F Y ++ LC G A A + E+ K+G LP + +L++GL R G+E L
Sbjct: 478 DVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA--RNGLEDLAL- 534
Query: 389 EKMLKEGIL-PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++LK + PD V +++ LC G+ DA + + G D TY +V G +
Sbjct: 535 -ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRK 593
Query: 448 ENRRKEGENLVNE 460
+ + LV++
Sbjct: 594 LGKVDKARQLVDD 606
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 8/297 (2%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF---RE 250
N +I + D+A ++ M+ P FN LI C++K+ + LF +
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+E C PN+ ++N ++ ++ DE + EM G VT LVDGLC G+
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +AC+L+ + S+ GV P F ++ L G AL ++ + +G+ P ++ T
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L++GL + + EA + KM+ PD ++ ++ LC G+ A + +G
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRG 509
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-PDLATYNSYMDGLSNARKS 486
+ PD + YH L+ G R E+L E+L PD + +DGL A K+
Sbjct: 510 VLPDTVLYHSLLDGLARNGL----EDLALELLKTSLCKPDFVMHKMVVDGLCKAGKA 562
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + S T +D L A E RRG P DF Y ++ LC G A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LKEGILPDSVTFNCLLE 408
E++ +L + G +VI + +I+G + + +A + + M G +PD VTFN LL+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC R +A L + G +P+ ++Y L+ G + R E L EM+++ +P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 469 DLATYNSYMDGLSNARK 485
DL Y S++ GL A +
Sbjct: 213 DLVAYTSFVTGLCKANR 229
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+KG SV ++ L + G A ++M + G PD T++ +L LC G
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM-LDEGFIPDLATYNSY 476
A L G+ + +TY +++ G + +R + + M G +PD+ T+NS
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150
Query: 477 MDGLSNARK 485
+ GL + +
Sbjct: 151 LKGLCSGER 159
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 36/316 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + F K M F+A+ K RPSV +N LING++K + D+ M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKW-GLRPSVVSFNTLINGYIKLGDLDEGFRLKSAM 197
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDV T++ILI+G C+ K D A LF EM + G PN V+F TLI G K
Sbjct: 198 HASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKV 257
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + +M+ G +T L+ GLC +G + + +L+ + G+ P Y L
Sbjct: 258 DLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTL 317
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ IALE L KM++E I
Sbjct: 318 IDGSCKEGDLEIALE-----------------------------------LRNKMIQESI 342
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D V + L+ LC GR DA+++ + GL PD TY ++++ + ++ K
Sbjct: 343 RLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASK 402
Query: 457 LVNEMLDEGFIPDLAT 472
L+ EM +G +P + T
Sbjct: 403 LLREMQRDGPVPGVVT 418
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 177/391 (45%), Gaps = 9/391 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
S+RH ++ ++ L + E S++ + + S +F ++ +
Sbjct: 8 SYRHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ + D + F ++ P + VL ++ R F FY
Sbjct: 68 VFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVL-EHLMEFRYFKLVWDFYKE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNIL+ FC+ + LA +F + + G P+VVSFNTLI G+
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M G + T IL++GLC EG++ +A EL + G++P +
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ C +A+E+ ++ +G P +I TLI GL + + + L+++M+ G
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +++ L++ C G A LR + + D + Y L+S RE R + E
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAE 366
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ EML G PD TY ++ R S
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKRDS 397
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 7/357 (1%)
Query: 131 VLNFISANPCPCSNDGI------FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
VLN I C G+ F C ++ + A R D + M + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR-V 245
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P++ +N LI + F++ +M PD+ + +I G C+ ++A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M G PNVV +NT+++G ++ E + EM + C VT ILVD
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G V + EL+ G +P Y ++ C EG A+ ++ + G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ T +++GL + V+A LM +M+++G P+ VTFN L+ LC G A L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G PD ++Y ++ G + + +E L+N M+++G P+ Y+S LS
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL +S + C P++ R++ ++ K
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT---------PDI-RMYATIIDGICKEGH 301
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN ++ G + +A M + D VT
Sbjct: 302 LE---VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M GC P+V+++ T+I GF E DE V + M
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++V+ I++ GLC+ GR + A EL+ ++G P + L+ LC +G
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +GI P+++ ++ +
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + M+ G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 599 PNESTYTMLIKGLAS 613
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 30/403 (7%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIF 157
TF +VR L + R ++ VL+ +S C C + G + +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 158 H------------FAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKC 203
H +NA + +++ A +RKL + YN ++ G
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ + D MVR P++VTFN LI CRN F+ + +M E GC P++ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
T+I G E + + M G + + V ++ GLC+ R +A EL+ + +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ D + LV+ C G +E+++++ G +P VI TT+I G + E
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L++ M G P++V++ +L+ LC GR VDA+ L +G P+ +T++ L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ ++ L+ +ML G PDL +Y++ +DGL A K+
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V R+ D L + M P +Y+V++ + F ++ + M
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEM-SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D N++++ C D A+GL R++ GC ++VS+N +++G +++
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ + C + VT L+ LC G + E++ S G P Y +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ +C EG+ +A E+++ + G P+V+ T+++GL + EA L+ +M ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VTFN L++ C G L + G PD +TY +++G+ +E E
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+ M G P+ +Y + GL +A + V
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F K +++ ++ ++M +P+ Y +++ G + A +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSS-CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ VTFN LI+ C+ + A+ L ++M GC+P+++S++T+I G K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + M+ G +++ + L EGRV K ++ + + Y +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + G +P+ T LI+GL EA L+ ++ G
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632
Query: 397 L 397
L
Sbjct: 633 L 633
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ + ++ +++ L S+ R+ + +++ + CP F+ +N
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ----------GCPPNPVTFNTLINFLC 472
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + + M L++G P + Y+ +I+G K + ++AL + MV + P+
Sbjct: 473 KKGLVEQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++ + R + + + +F +++ + V +N +I + D ++
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
M+ GC + T +L+ GL +EG +A EL+ + RG L K +FG+V
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGIV 644
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 158/357 (44%), Gaps = 7/357 (1%)
Query: 131 VLNFISANPCPCSNDGI------FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
VLN I C G+ F C ++ + A R D + M + +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR-V 245
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P++ +N LI + F++ +M PD+ + +I G C+ ++A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M G PNVV +NT+++G ++ E + EM + C VT ILVD
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G V + EL+ G +P Y ++ C EG A+ ++ + G P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ T +++GL + V+A LM +M+++G P+ VTFN L+ LC G A L
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G PD ++Y ++ G + + +E L+N M+++G P+ Y+S LS
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 15/375 (4%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + F +H VL +S + C P++ R++ ++ K
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT---------PDI-RMYATIIDGICKEGH 301
Query: 170 MNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ +A E + ++ +P+V YN ++ G + +A M + D VT
Sbjct: 302 LE---VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVT 358
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
FNIL+ FC+N D + L +M GC P+V+++ T+I GF E DE V + M
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC+ ++V+ I++ GLC+ GR + A EL+ ++G P + L+ LC +G
Sbjct: 419 SCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 478
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+E++ ++ G P +I+ +T+I+GL + K EA L+ M+ +GI P+++ ++ +
Sbjct: 479 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIA 538
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L GR ++ + D + Y+ ++S + + M+ G +
Sbjct: 539 CALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCM 598
Query: 468 PDLATYNSYMDGLSN 482
P+ +TY + GL++
Sbjct: 599 PNESTYTMLIKGLAS 613
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 30/403 (7%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCPEMERIF 157
TF +VR L + R ++ VL+ +S C C + G + +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 158 H------------FAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKC 203
H +NA + +++ A +RKL + YN ++ G
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDE---AVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ + D MVR P++VTFN LI CRN F+ + +M E GC P++ +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
T+I G E + + M G + + V ++ GLC+ R +A EL+ + +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ D + LV+ C G +E+++++ G +P VI TT+I G + E
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L++ M G P++V++ +L+ LC GR VDA+ L +G P+ +T++ L++
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ ++ L+ +ML G PDL +Y++ +DGL A K+
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 150/331 (45%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V R+ D L + M P +Y+V++ + F ++ + M
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEM-SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D N++++ C D A+GL R++ GC ++VS+N +++G +++
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ + C + VT L+ LC G + E++ S G P Y +
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ +C EG+ +A E+++ + G P+V+ T+++GL + EA L+ +M ++
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VTFN L++ C G L + G PD +TY +++G+ +E E
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+ M G P+ +Y + GL +A + V
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F K +++ ++ ++M +P+ Y +++ G + A +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSS-CGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P+ VTFN LI+ C+ + A+ L ++M GC+P+++S++T+I G K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + M+ G +++ + L EGRV K ++ + + Y +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + G +P+ T LI+GL EA L+ ++ G
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA 632
Query: 397 L 397
L
Sbjct: 633 L 633
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ + ++ +++ L S+ R+ + +++ + CP F+ +N
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQ----------GCPPNPVTFNTLINFLC 472
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + + M L++G P + Y+ +I+G K + ++AL + MV + P+
Sbjct: 473 KKGLVEQAIELLKQM--LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPN 530
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ ++ + R + + + +F +++ + V +N +I + D ++
Sbjct: 531 TIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFA 590
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLV 337
M+ GC + T +L+ GL +EG +A EL+ + RG L K +FG+V
Sbjct: 591 YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGIV 644
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 4/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+A+ + + EAM P + YNVL G + + D+A D M
Sbjct: 282 YNTLVSAYARLGWIKQATDVVEAMTAF-GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM 340
Query: 217 VR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ V PDVVT+N L+ + ++ AL L EMREKG ++V+ N +++G E +
Sbjct: 341 EQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQ 400
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M E G +T L+D C G V KA L+ + R G+ F
Sbjct: 401 LEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNT 460
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC E A E++ ++G +P ++ T++ + K A L ++M+K
Sbjct: 461 LLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P T+N L++ L +G+ +A D+L L GL PD TY+I++ Y +E ++
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEM-GLVPDDTTYNIIIHAYCKEGDLEKA 579
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
N+M++ F PD+ T N+ M+GL
Sbjct: 580 FQFHNKMVENSFKPDVVTCNTLMNGL 605
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 152/324 (46%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +A ++++ + M +L P V YN L++ KC+ AL + M
Sbjct: 317 YNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEM 376
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VK +VT NI++ G CR + + ALG M E+G P+V+++NTLI
Sbjct: 377 REKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNV 436
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ G + + T L+ LC E R +A EL+ +RG +P + Y +
Sbjct: 437 AKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTV 496
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ E AL + DE+ K+ PS+ TLI+GL + K EA + ++++ G+
Sbjct: 497 MAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGL 556
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+PD T+N ++ C G A + PD +T + L++G R ++
Sbjct: 557 VPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMK 616
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L +++G D+ TYN+ + L
Sbjct: 617 LFESWVEKGKKVDVITYNTLIQAL 640
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 3/306 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V + ++ + L E M + +G P V YN LI+ K KA D MVR
Sbjct: 392 VKGLCREGQLEEALGRLEMMTE--EGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS 449
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+K D T N L+ C+ K+++ A L R ++G P+ VS+ T++ +F E K +
Sbjct: 450 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EMI+ S T L+ GL G++ +A + + + G++P D Y ++
Sbjct: 510 LCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHA 569
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ A + +++ + P V+ C TL+ GL + +A L E +++G D
Sbjct: 570 YCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVD 629
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+T+N L++ LC A R +GL PD TY++L+S + R E + +++
Sbjct: 630 VITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLH 689
Query: 460 EMLDEG 465
++ + G
Sbjct: 690 KLNESG 695
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 36/299 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YN L++ + + +A + M +PD+ T+N+L +G C+ K D A L
Sbjct: 277 PTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 336
Query: 248 FREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
EM + G +P+VV++NTL+ F ++ + +N+ EM E G + S VT I+V GL
Sbjct: 337 KDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGL- 395
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
C EG AL ++ + ++G P VI
Sbjct: 396 ----------------------------------CREGQLEEALGRLEMMTEEGLTPDVI 421
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+ + +A LM++M++ G+ D+ T N LL +LC R +A+ L
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G PD ++Y +++ Y +E + + L +EM+ P ++TYN+ + GLS K
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGK 540
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 142/305 (46%), Gaps = 3/305 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+ +A LI R P+ +N+L++ AL +M + PD VT+N L++
Sbjct: 193 SLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLN 252
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR A L M+++G P ++NTL+ + + ++ M G E
Sbjct: 253 AHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEP 312
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD-FDYFGLVEKLCGEGNAGIALEV 352
T +L GLC G+V +A +L + + G++ D Y LV+ + AL +
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL 372
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++E+ +KG S++ +++GL R + EA G +E M +EG+ PD +T+N L++ C
Sbjct: 373 LEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCK 432
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A L GL D T + L+ +E R +E E L+ GF+PD +
Sbjct: 433 AGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVS 492
Query: 473 YNSYM 477
Y + M
Sbjct: 493 YGTVM 497
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 7/306 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y ++ + K + + AL +D M++ ++ P + T+N LI G K A+
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E+ E G P+ ++N +I + E ++ +M+E + VTC L++GLC
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ KA +L + +G Y L++ LC + + AL ++ +G P V
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD---RLRL 424
L+ L + VEA ++ K+ + G L + + + V D + +
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIES 727
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ +T+G D + +Y+ + + KE + +++EM+ +G D +TY + M+GL +
Sbjct: 728 VGNTQGDDQE--SYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQ 785
Query: 485 KSVRQT 490
K RQT
Sbjct: 786 K--RQT 789
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 23/242 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++A+ K + AF+ K+++ +P V N L+NG +KA+ ++
Sbjct: 563 YNIIIHAYCKEGDLEK---AFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFE 619
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
V K DV+T+N LI C++ D AL F +M +G P+V ++N L+
Sbjct: 620 SWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAG 679
Query: 275 KFDEGVNMAYEMIELGCEFS-------SVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ E M +++ E G + + E + G K E+ D G
Sbjct: 680 RSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETG--------KDPEVKSDIESVGNT 731
Query: 328 PKD--FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL-RRLRKGVEA 384
D Y +++LC G A V+DE+ +KG TL+EGL +R ++ A
Sbjct: 732 QGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQTHA 791
Query: 385 SG 386
+G
Sbjct: 792 AG 793
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EAS 385
P + + LV C +G AL + ++ G P + TL+ RKG+ EA
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA--HCRKGMLGEAR 264
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+ +M KEGI+P T+N L+ +G A + + G +PD TY++L +G
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
Query: 446 TRENRRKEGENLVNEMLDEGFI-PDLATYNSYMDGLSNARKS 486
+ + E L +EM G + PD+ TYN+ +D ++S
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRS 366
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 152/327 (46%), Gaps = 7/327 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ + K RM+ L MR +P V IYN +++G + F +A F D
Sbjct: 84 LYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDE 143
Query: 216 -MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MVR P VVT+ LI G C+ KK LA+ ++ M E+ P +VS++ +I G
Sbjct: 144 TMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAG 203
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + EM LGCE + V L+DGLC G + A L R G P Y
Sbjct: 204 RVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYA 263
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C AL + D + L V T ++ GL R R+ +A L +M
Sbjct: 264 TLIDTFCRNDRTETALGLFDHIRDYCPL-DVAMYTAVVSGLCRERRLDDARALFREMRLA 322
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADR-LRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ D+ +N LL GR+ +A R L L G + +TY+ +++G E+
Sbjct: 323 GVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLES---- 378
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
G L EM G PD ATY++ +D L
Sbjct: 379 GMVLFYEMRQRGIAPDFATYSALIDRL 405
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 154/342 (45%), Gaps = 11/342 (3%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDK 208
P + F ++A K+NR+ D A E M D P V + LI GF K R ++
Sbjct: 8 PPNQHAFASLIDALSKSNRLGDAARALELM---CDAGIHPDVVTFTALIRGFCKNRMVER 64
Query: 209 ALGFYDRMVR-DRVKPDVVTFNILISGFCRNKKFDLALGLFREMR-EKGCNPNVVSFNTL 266
A + M++ +R +PD + +LI G+C+ + D AL L REMR E+ P+VV +N++
Sbjct: 65 AWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSI 124
Query: 267 IRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+ G +F E E M+ GC + VT L+ G C ++ A + R
Sbjct: 125 VDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERK 184
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y +++ L G A VV E+ G +V+ TTLI+GL + +A
Sbjct: 185 IQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAY 244
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP-DGMTYHILVSG 444
L M + G P+ T+ L++ C RT A L L + P D Y +VSG
Sbjct: 245 ALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETA--LGLFDHIRDYCPLDVAMYTAVVSG 302
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE R + L EM G D YN + G + +S
Sbjct: 303 LCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRS 344
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 10/270 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++ K+ ++D + M++ P+ Y LI+ F + + ALG +D
Sbjct: 226 IYTTLIDGLCKSGFLDDAYALYRIMKR-SGAFPNQRTYATLIDTFCRNDRTETALGLFDH 284
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+RD DV + ++SG CR ++ D A LFREMR G + + ++N L+ G F +
Sbjct: 285 -IRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGR 343
Query: 276 FDEGVNMAYEM-IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E + E+ + GC + +T ++ G C E ++ L + +RG+ P Y
Sbjct: 344 SEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGMV----LFYEMRQRGIAPDFATYS 399
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+++L G G A ++ +E+ G P ++ L R+G A+ L+E +
Sbjct: 400 ALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEMAMA- 458
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ D+ +F+ +D + D+ R L
Sbjct: 459 --VDDTASFSLPWDDEDGAAQDEDSQREEL 486
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 12/298 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A K N ++ + + M L+ P+V Y+ ++ GFV + + A+ + ++
Sbjct: 193 LKALCKRNEVDVAVRVLDEM-SLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKG 251
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDV ++ +L+SGFCR K A+ + M E P+ V++ +I + RK E V
Sbjct: 252 WMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAV 311
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG----- 335
N+ +M+E G SSV C +VD LC EG V +ACE+ RGV+ K + G
Sbjct: 312 NLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEV-----WRGVVRKGWRVGGAVVST 366
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+V LC EG A V+DEL +KG + S++ TLI G+ + EA L ++M+++G
Sbjct: 367 IVHWLCKEGKVVEARGVLDEL-EKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKG 425
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+P++ T+N L++ C VG +A R+ G P+ T+ ILV G + +KE
Sbjct: 426 RVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKKE 483
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 165/342 (48%), Gaps = 38/342 (11%)
Query: 177 FEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISG 234
A+R + +P V N L+N V+ + A + R+ P+VV+ NIL+
Sbjct: 136 LSALRIFLKFQPLGVRSLNALLNALVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKA 195
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
C+ + D+A+ + EM G PNVVS++T++ GF + + + + E+++ G
Sbjct: 196 LCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPD 255
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ +L+ G C G+++ A ++ V P + Y ++E C G A+ +++
Sbjct: 256 VTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLE 315
Query: 355 ELWKKGNLPSVIAC-----------------------------------TTLIEGLRRLR 379
++ +KG +PS + C +T++ L +
Sbjct: 316 DMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEG 375
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
K VEA G++++ L++G + +T+N L+ +C+ G+ +A RL KG P+ TY+
Sbjct: 376 KVVEARGVLDE-LEKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYN 434
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+L+ G+ + KE ++ EM++ G +P+ +T++ +DG+S
Sbjct: 435 VLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGIS 476
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++P+ V+ N LL+ LC A R+ S GL P+ ++Y ++ G+ + +
Sbjct: 182 LVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAM 241
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ E+LD+G++PD+ +Y M G K V R
Sbjct: 242 RVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIR 277
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%)
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+P+V++C L++ L + + A ++++M G++P+ V+++ +L G A R
Sbjct: 183 VPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMR 242
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ KG PD +Y +L+SG+ R + + +++ M + P TY ++
Sbjct: 243 VFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYC 302
Query: 482 NARK 485
RK
Sbjct: 303 KGRK 306
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 143/297 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y VL++ + D A +M V P+VVTF+ +++G + A G
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGY 456
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M++ G PNVV++ TLI GFF + + +++ +M+ G E ++ + LV+GL
Sbjct: 457 MRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRK 516
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A L D RG+L +Y L++ L GN AL+V EL ++ P +
Sbjct: 517 NGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVV 576
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
I L RL K EA +++M G+ PD T+N ++ C G T A +L
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ P+ +TY LV G ++ + L+NEM GF P TY + S +R
Sbjct: 637 WSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSR 693
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 8/300 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +YNV IN + +F +A F M ++PD T+N +IS CR AL L
Sbjct: 572 PDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKL 631
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+ PN++++ TL+ G ++ + EM G + +T ++ C+
Sbjct: 632 LNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CS 690
Query: 308 EGR----VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
R +L+ EL++ G+ Y LV LC G A V+DE+ +G P
Sbjct: 691 GSRSPYVILEVHELMMG---AGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I LI G + A +ML +G+ P+ TFN LL L GR +AD +
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL+P+ +TY ILV+GY +++ + E L EM+ +GFIP +TYNS + + A
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 144/296 (48%), Gaps = 1/296 (0%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
IDG V +N LI+G+ K ++ AL +RM + DVV +N L++GF + D
Sbjct: 184 IDGLGVVG-WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADA 242
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A + M+ G P+VV+ TLI + ++ +E + M+ G VT LVD
Sbjct: 243 AWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVD 302
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC +GR +A L + + GV P Y ++ L +L ++ E+ +G
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAM 362
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++ TT+++ L + K EA ++ L + I P+ VT+ L++ C G A+++
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L K + P+ +T+ +++G + + + +M D G P++ TY + +DG
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG 478
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 156/381 (40%), Gaps = 72/381 (18%)
Query: 171 NDGLLAFE-AMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
D A+E A R DG PSV + LI + K + ++A Y+ MVR V PDVVT
Sbjct: 238 GDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTL 297
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ L+ G CR+ +F A LFREM + G PN V++ T I ++ +E + + EM+
Sbjct: 298 SALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS 357
Query: 289 LGCEF-----------------------------------SSVTCEILVDGLCNEGRVLK 313
G + VT +LVD C G +
Sbjct: 358 RGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDG 417
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A ++++ + V P + ++ L G A + ++ G P+V+ TLI+
Sbjct: 418 AEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLID 477
Query: 374 GLRR--------------LRKGVEAS---------------------GLMEKMLKEGILP 398
G + L +GVEA+ L + M + G+L
Sbjct: 478 GFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLL 537
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D V + L++ L G A ++ + L PD + Y++ ++ R + E ++ +
Sbjct: 538 DHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFL 597
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
EM + G PD ATYN+ +
Sbjct: 598 KEMRNTGLEPDQATYNTMISA 618
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 142/293 (48%), Gaps = 3/293 (1%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRV--KPDVVTFNILISGFCRNKKFDLALGL 247
V++ L+ G + +A + +VR R VV +N LI G+C+ + AL +
Sbjct: 153 VTMSTALV-GLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAV 211
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +G + +VV +NTL+ GFF D +A M G E S VT L+ C
Sbjct: 212 VERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCK 271
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ +A L R GVLP LV+ LC +G A + E+ K G P+ +
Sbjct: 272 MKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVT 331
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T I+ L ++++ E+ GL+ +M+ G+ D V + +++ L G+ +A + A
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P+ +TY +LV + R E ++ +M ++ P++ T++S ++GL
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGL 444
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPD---------------------------- 224
YN L+ GF + D A +RM D V+P
Sbjct: 227 YNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMV 286
Query: 225 -------VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
VVT + L+ G CR+ +F A LFREM + G PN V++ T I ++ +
Sbjct: 287 RSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVN 346
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + + EM+ G V ++D L EG++ +A +++ + P Y LV
Sbjct: 347 ESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLV 406
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C GN A +++ ++ +K P+V+ ++++ GL + +A+G M KM GI
Sbjct: 407 DAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIA 466
Query: 398 PDSVTFNCLLEDL--CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ VT+ L++ C G+ D R + +G++ + LV+G + +E E
Sbjct: 467 PNVVTYGTLIDGFFKCQ-GQEAALDVYRDMLH-EGVEANNFIVDSLVNGLRKNGNIEEAE 524
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L +M + G + D Y + MDGL
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGL 549
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++YN L++ KA D M+ + PD +TFN LI G C++ D A +
Sbjct: 714 ITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYA 773
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M +G +PN+ +FNTL+ G + E + EM ++G E +++T +ILV G +
Sbjct: 774 QMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKS 833
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++A L + +G +PK Y L+ G A E+ E+ ++G L +
Sbjct: 834 NKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 893
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ G +LR G E L++ M + G P T + + G T +A RL
Sbjct: 894 ILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRL 946
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+V D V++NI ++G LA + EM ++G + V+ +T + G E
Sbjct: 112 QVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA 171
Query: 280 VNMAYEMIELGCEFSS---VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+A EM+ G V L+DG C + A +V + +G+ Y L
Sbjct: 172 AALA-EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTL 230
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V G+A A EV + + G PSV+ TTLI ++++ EA L E M++ G+
Sbjct: 231 VAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGV 290
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LPD VT + L++ LC GR +A L G+ P+ +TY + + R E
Sbjct: 291 LPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLG 350
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM+ G DL Y + MD L K
Sbjct: 351 LLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 140/357 (39%), Gaps = 40/357 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD--KALGFY 213
+++ +N + + ++ + MR P + YN +I+ +CRE + KAL
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRN-TGLEPDQATYNTMISA--QCREGNTSKALKLL 632
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M +KP+++T+ L+ G + A L EM G P +++ +++ G
Sbjct: 633 NEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGS 692
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R + + M+ G LV LC G KA ++ + RG+ P +
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752
Query: 334 FGLVEKLC-----------------------------------GEGNAGIALEVVDELWK 358
L+ C G G A V+ E+ K
Sbjct: 753 NALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKK 812
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P+ + L+ G + VEA L +M+ +G +P + T+N L+ D G
Sbjct: 813 MGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQ 872
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L +G+ TY IL++G+++ E L+ +M + GF P T +S
Sbjct: 873 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISS 929
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 1/162 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A R+ + M+K+ P+ Y++L+ G+ K +AL Y M
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKM-GLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 845
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V P T+N LIS F + + A LF EM+ +G +++ L+ G+ R
Sbjct: 846 VSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNG 905
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
E + +M ELG + S T + G +A L+
Sbjct: 906 TEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLL 947
>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Glycine max]
Length = 461
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 158/334 (47%), Gaps = 12/334 (3%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-----RPSVSIYNVLINGFVKCREFDKA 209
++ + V++ KA ++ + A ++DG P V YN LI+ + + D A
Sbjct: 14 KLLNITVSSLCKAKQIPN------AETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVA 67
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
RM + PDVV+FN LISG R F +L LF EM ++G NP+ S N L+
Sbjct: 68 YSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNC 127
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F K DE N ++ I L E T I+++GLC G V A L + R G +P+
Sbjct: 128 LFQLGKPDEA-NRVFKEIVLRDEVHPATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQ 186
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L+ LC A V+ E + GN P+ + TT++ R R E ++
Sbjct: 187 VLTYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILS 246
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M G D + ++ + GR +A+ + + + G+ PD ++Y+ L++ Y R+
Sbjct: 247 EMRSLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQG 306
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R + L++E+ EG D T+ +DGL A
Sbjct: 307 RLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKA 340
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 128/290 (44%), Gaps = 4/290 (1%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
+ YN++ING K AL + + R P V+T+N LI+G C+ ++ A + +E
Sbjct: 153 ATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKE 212
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
E G PN V++ T++ F R F+EG+ + EM LG F ++ + GR
Sbjct: 213 FGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGR 272
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A E+V GV P Y L+ C +G AL ++DE+ +G T
Sbjct: 273 MQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTI 332
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+++GL + A + M G + V FNC L+ L G A RL + K
Sbjct: 333 IVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEVK- 391
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D TY I+V R R ++ L G+ AT + + GL
Sbjct: 392 ---DSFTYTIVVHNLCRARRFLCASKVLVSCLKCGYQVLRATQRAVIVGL 438
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
L S+ I V LC ++ A ++D R GVLP Y L++ C +
Sbjct: 7 LKSSLSTKLLNITVSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDV 66
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A V+ + G P V++ TLI G R ++ L ++MLK GI PD+ + N L+
Sbjct: 67 AYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMN 126
Query: 409 DLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
L +G+ +A+R+ + + + P TY+I+++G + +L + GF+
Sbjct: 127 CLFQLGKPDEANRVFKEIVLRDEVHP--ATYNIMINGLCKNGYVGNALSLFRNLQRHGFV 184
Query: 468 PDLATYNSYMDGLSNARK 485
P + TYN+ ++GL AR+
Sbjct: 185 PQVLTYNALINGLCKARR 202
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 156/326 (47%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R ++ +A ++++ + M +L P V YN L++ K R AL +
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLE 373
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M VKP +VT NI++ C+ K + ALG ++ E+G P+V+++NTLI +
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM+ G + + T ++ LC R A EL+ +RG +P + Y
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ E N AL + D++ ++ +PS+ TLI+GL R+ + EA + +++++
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK 553
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++PD T+N ++ C G +A R PD +T + L++G + +
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L +++G D+ TYN+ + +
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSM 639
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 157/333 (47%), Gaps = 11/333 (3%)
Query: 142 CSNDGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSI 192
CS+D + EM + V + K ++ + L E + + +G P V
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE--EGLAPDVIT 421
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+ + K KA D MV +K D T N ++ C+ K+++ A L
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ VS+ T++ +F E + + + +MIE S T L+ GLC R+
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + + + +G++P + Y ++ C EG+ A +++ + P V+ C TL+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL K +A L E +++G D +T+N L++ +C VG A KGL
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
PD TY++++S + R +E N+++++ D G
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 41/362 (11%)
Query: 160 AVNAFVKANRMNDGLL---AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
A NA + A + L + + R LI+ R P+ +N+L++ AL
Sbjct: 173 AANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLS 232
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + PD VT+N L++ CR A L M+ G P ++NTL+ F
Sbjct: 233 TMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLG 292
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR----------- 323
+ + M G E T +L GLC G+V +A L + R
Sbjct: 293 WIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTY 352
Query: 324 -------------------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+GV P + +V+ LC EG AL ++++ +
Sbjct: 353 NTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE 412
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G P VI TLI+ + +A LM++M+ +G+ D+ T N +L +LC + R D
Sbjct: 413 EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED 472
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A+ L +G PD ++Y +++ Y +E + L ++M++ IP ++TYN+ +
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIK 532
Query: 479 GL 480
GL
Sbjct: 533 GL 534
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 11/308 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y ++ + K + AL +D+M+ ++ P + T+N LI G CR ++ A+
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E+ EKG P+ ++N +I + E + +M+E + VTC L++GLC
Sbjct: 547 LNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ KA +L + +G Y L++ +C G+ AL D++ KG P
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL-----EDLCDVGRTVDADRL 422
++ L + EA ++ K+ G L S +F C L D DV +
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSGKL--SQSFACPLLKPSSADEADVKE--HEGKP 722
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+S K D TY ++G + KE + +++EM+ +G D +TY + M+GL
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
Query: 483 ARKSVRQT 490
+K RQT
Sbjct: 783 RQK--RQT 788
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 5/330 (1%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF--DKALGFYDRMV 217
A++A+ + + ++R+ RPS+ N +++ + +L + ++
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
R+ P+ TFN+L+ C AL M+ G +P+ V++NTL+ +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + M G + T LV G + +A ++V + G P Y L
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA 320
Query: 338 EKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
LC G A + DE+ + LP V+ TL++ + R +A L+E+M +G+
Sbjct: 321 VGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P VT N +++ LC G+ +A +L +A +GL PD +TY+ L+ Y + +
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE-EGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM+ +G D T N+ + L ++
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKR 469
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 8/302 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKF--DLA 244
P+ + + ++ + + R A + R R V+P + N ++S R+ +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +FR + E +PN +FN L+ + + + M G +VT L++
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +G + +A L+ R G+ P Y LV G A +VV+ + G P
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLK-EGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ L GL + K EA L ++M + LPD VT+N L+ D C R +D LR
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLV-DACFKWR-CSSDALR 370
Query: 424 LLAST--KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
LL KG+ P +T++I+V +E + +E + ++ +EG PD+ TYN+ +D
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 482 NA 483
A
Sbjct: 431 KA 432
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 7/237 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALG 211
E ++ ++A+ K + + AF K+++ +P V N L+NG + DKAL
Sbjct: 559 ETTYNIIIHAYCKEGDLEN---AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ V K DV+T+N LI C+ D AL F +M KG P+ ++N ++
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK-ACELVIDFSRRGVLPKD 330
+ +E NM +++ + G S C +L +E V + + + S +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL-RRLRKGVEASG 386
Y + LC G A V+DE+ +KG TL+EGL +R ++ A+G
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTHAAG 792
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 155/296 (52%), Gaps = 3/296 (1%)
Query: 176 AFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVR-DRVKPDVVTFNILI 232
AFE + +++ +P+V + LI+G K +KA + ++VR + KP+V+T+ +I
Sbjct: 294 AFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMI 353
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SG+CR K + A L M+E+G PN ++ TLI G F+ ++ M G
Sbjct: 354 SGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFS 413
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T +V+GLC GRV +A +++ D + G+ P F Y L+ + C + N AL +
Sbjct: 414 PNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALAL 473
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++ K G P + + TTLI R + E+ E+ ++ GI+P + T+ ++ C
Sbjct: 474 FNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCR 533
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
G A + S G PD +TY ++SG ++++R E +L + M+++G +P
Sbjct: 534 EGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 4/303 (1%)
Query: 175 LAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
L FE M + G +P Y V++ + K +A + M+ D TF ++IS
Sbjct: 191 LLFEEM--CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIIS 248
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
F AL FR + + G PN+++F +I G + M EM+ G +
Sbjct: 249 RFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKP 308
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ T L+DGLC +G KA L + R P Y ++ C E A +
Sbjct: 309 NVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 368
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ + ++G +P+ TTLI+G + A LM M EG P+ T+N ++ LC
Sbjct: 369 LSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCK 428
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR +A ++ GL PD TY+IL+S + ++ ++ L N+ML G PD+ +
Sbjct: 429 RGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHS 488
Query: 473 YNS 475
Y +
Sbjct: 489 YTT 491
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ M V+PD +++ +++ +C+ A M E+G + +F +I F
Sbjct: 192 LFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFS 251
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
G+ + ++++G E + + +++GLC G + +A E++ + +G P +
Sbjct: 252 GKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVY 311
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L++ LC +G A + +L + N P+V+ T +I G R K A L+ +
Sbjct: 312 THTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSR 371
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M ++G++P++ T+ L++ C G A L L S++G P+ TY+ +V+G + R
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMD 478
+E ++ + G PD TYN M
Sbjct: 432 VQEAYKMLEDGFQNGLKPDKFTYNILMS 459
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ + + +++N + M++ L+ P+ + Y LI+G K F++A + M
Sbjct: 353 ISGYCREDKLNRAEMLLSRMKEQGLV---PNTNTYTTLIDGHCKAGNFERAYDLMNLMSS 409
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P++ T+N +++G C+ + A + + + G P+ ++N L+ + +
Sbjct: 410 EGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQ 469
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + +M+++G + + L+ C E R+ ++ + R G++P + Y ++
Sbjct: 470 ALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMIC 529
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EGN +A++ L G P I +I GL + K EA L + M+++G++P
Sbjct: 530 GYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Query: 399 DSVTFNCLLEDLC 411
VT L + C
Sbjct: 590 CEVTRITLAYEYC 602
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 40/267 (14%)
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
EK C ++ F + E V M EM G ++ T ++ G V
Sbjct: 132 EKACEV----MRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVE 187
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA-------GIALE---VVDE------- 355
A L + RGV P Y +V C GN + LE VVD
Sbjct: 188 YAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLII 247
Query: 356 ------------LW------KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LW G P++I T +IEGL + +A ++E+M+ +G
Sbjct: 248 SRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWK 307
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRL-LASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ T L++ LC G T A RL L L ++ P+ +TY ++SGY RE++ E
Sbjct: 308 PNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEM 367
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L++ M ++G +P+ TY + +DG A
Sbjct: 368 LLSRMKEQGLVPNTNTYTTLIDGHCKA 394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+VE G A+E+V E+ +G +P+ +I+ + A L E+M G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PDS+++ ++ C +G ++AD+ + +G D T+ +++S ++ +
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
++D G P+L + ++GL R S++Q
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCK-RGSIKQA 294
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ F K E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ L M+ G P+V +++ LI G E K D+ + EM++ G +SV+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C +GRV A E+ + + P Y L+ LC G+ A ++++E+
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P I TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G++P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML G++P+SV
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+F L++ C GR A + ++ L PD +TY+ L+ G + K+ ++L+NEM
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ C EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+ +++ L+ G+ ++ R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 26/355 (7%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFD 207
C E ++ ++ K R+N+ AF+ + L DG ++ + Y+ LI+G + R FD
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNE---AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFD 329
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ G+Y M+ + PDVV + I+I G + + AL M++KG P+ +NT++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ + + EM++ S T I++ GLC G V +A ++ + G
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKK---GNLPSVIACTTL-------IEGLRR 377
P Y L++ EG LE L+ K GN PS+ TL E LR+
Sbjct: 450 PTVMTYNALIDGFYREGR----LEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRK 505
Query: 378 LRKGVEASG-------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L + SG L+ ++ G++PD VT+N L+ LC A RL KG
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ PD +TY L+ G R +R + L +L G P L+ YNS M L +K
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 142/329 (43%), Gaps = 1/329 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P F V A A R D + AF M + RP+ +YN ++ V AL
Sbjct: 134 PASSSAFAALVAAHSSAGRNADAVQAFSRMDEF-QSRPTAFVYNTILKALVDSGVILLAL 192
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y+RMV P+ T+N+L+ G C+ AL +F EM ++G PNV + L+
Sbjct: 193 ALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K DE V + M + GC VT + GLC GRV +A + ++ G
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ L + ++ P V+ T +I G + +A ++
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K+G +PD+ +N +L+ LCD G A LR L D T I++ G +
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
E + +EM + G P + TYN+ +DG
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDG 461
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 20/285 (7%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + +A R+ D L + M+K P YN ++ + ++A
Sbjct: 349 LYTIMIRGCAEAGRIEDALSFLDVMKK-KGFVPDTFCYNTVLKVLCDHGDLERAHTLRSE 407
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+++ + D T I+I G C+ D A+ +F EM E GC+P V+++N LI GF+ E +
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR 467
Query: 276 FDEGVNMAYEMIELG----------------CEFSSVTCEILVDGLCNEGRVLKACELVI 319
+E M + +E+G C+ S+ LV +C G+VLKA +L+
Sbjct: 468 LEEA-RMLFHKMEMGNNPSLFLRLTLGANQVCDSESL--RKLVHDMCQSGQVLKAYKLLR 524
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
GV+P Y L+ LC N A+ + EL KG P I TLI+GL R
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +A L + +L+ G P +N ++ LC + + A L L
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWL 629
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+ R G + +F L+ + + V M E ++ ++ L + G
Sbjct: 127 DARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSG 186
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+L A L G P Y L++ LC +G AG AL++ DE+ +G +P+V T
Sbjct: 187 VILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYT 246
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
L+ L K EA L+ M +G LPD VT+N L LC VGR +A + ++
Sbjct: 247 VLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG 306
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G Y L+ G + R EG ML+ PD+ Y + G + A
Sbjct: 307 GFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%)
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P F Y +++ L G +AL + + + G P+ L++GL + +A +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ML GI+P+ + LL LC+ G+ +A +L KG PD +TY+ +SG +
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R E + + D GF L Y+ +DGL AR+
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARR 327
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L++ + + KA ++ V PDVVT+N LI+G C+ + D A+ LF+E++ KG
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+P+ +++ TLI G + ++ + + +++ G S ++ LC ++ +A
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625
Query: 316 ELVIDFSRRGVLPKDFDY 333
L +D+ LPK +++
Sbjct: 626 NLWLDY-----LPKKYNF 638
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 29/334 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
+ V+ VK R+ D + M G+ PS +++ +I GF K E D+AL +
Sbjct: 304 YGAVVDGLVKCGRVEDAWKVAQEM----GGQGLAPSEFVFSAVITGFCKSGEVDRALMVW 359
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ MV RVKP+VV ++ +I GF R+ + A LF EM + C PN+V++++++RG+F
Sbjct: 360 ETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHI 419
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ EMI++GC ++++ IL+ GLC+ GR+ A + + RG P Y
Sbjct: 420 ANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAY 479
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+++ LC G L + +++ KG+ P VI+ L++ L R A L+ +ML
Sbjct: 480 TSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQML 539
Query: 393 KEGILPDSVTFNCLLED------------------LCDVGRTVDADRLRLLASTKGLDPD 434
+ PD++T N L + LC R A + ++ K + P+
Sbjct: 540 DQMCDPDTITCNIFLREFGVLEGKGREFLEGLVMRLCYRDRYRAAGDVVMVMLAKYIVPE 599
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
++ +V G + R ++ +V+ DE + P
Sbjct: 600 AGIWYTIVRGVCQTKRVQK---VVDNCWDEIWRP 630
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 175/384 (45%), Gaps = 18/384 (4%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
I AW D F T+ +V +LA + E ++++ + DG+ S
Sbjct: 188 IPAWNLVPDKF-----TYSTVVSALADAGCVEEAVALVHEMVV-------DGVVS----A 231
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + A ++A +N + F M +L + YNVL++G + C E A+
Sbjct: 232 EAFNPVLKAMLRAGDVNGAVKLFRFM-QLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMR 290
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
RM + + P ++T+ ++ G + + + A + +EM +G P+ F+ +I GF
Sbjct: 291 RMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSG 350
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D + + M+ + + V ++DG GR+ +A +L + +P Y
Sbjct: 351 EVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYS 410
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V N+ AL +E+ K G +P+ I+ + LI GL + + +A + + M+
Sbjct: 411 SMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGR 470
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDPDGMTYHILVSGYTRENRRKE 453
G PD++ + +++ LC G RL KG PD ++Y++L+ R N
Sbjct: 471 GCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPR 530
Query: 454 GENLVNEMLDEGFIPDLATYNSYM 477
+L+N+MLD+ PD T N ++
Sbjct: 531 AMDLLNQMLDQMCDPDTITCNIFL 554
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 143/325 (44%), Gaps = 3/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+A A + + + M ++DG S +N ++ ++ + + A+ + M
Sbjct: 200 YSTVVSALADAGCVEEAVALVHEM--VVDGVVSAEAFNPVLKAMLRAGDVNGAVKLFRFM 257
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VT+N+L+ G + A+ + R M +G P ++++ ++ G +
Sbjct: 258 QLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRV 317
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ +A EM G S ++ G C G V +A + V P Y +
Sbjct: 318 EDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAM 377
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G A ++ +E+ +P+++ ++++ G + A E+M+K G
Sbjct: 378 IDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGC 437
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P +++++ L+ LCDVGR DA + +G PD + Y ++ G G
Sbjct: 438 VPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLR 497
Query: 457 LVNEMLDEG-FIPDLATYNSYMDGL 480
L N+ML +G PD+ +YN +D L
Sbjct: 498 LFNDMLAKGDAKPDVISYNVLLDAL 522
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 221 VKPDVVTFNILISGFC-----RNKKFDLA--LGLFRE-MREKGCNPNVVSFNTLIRGFFG 272
+ P +++FN+L+ C RN LA LG+ + + P+ +++T++
Sbjct: 150 LTPTLLSFNLLLKCICSSMVPRNPGLYLAVALGILHDVIPAWNLVPDKFTYSTVVSALAD 209
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+E V + +EM+ G S+ ++ + G V A +L +G
Sbjct: 210 AGCVEEAVALVHEMVVDGV-VSAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVT 268
Query: 333 YFGLVEKL--CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ L CGE A A+ ++ + +G +P ++ +++GL + + +A + ++
Sbjct: 269 YNVLLHGLLLCGEARA--AMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQE 326
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST---KGLDPDGMTYHILVSGYTR 447
M +G+ P F+ ++ C G + DR ++ T + P+ + Y ++ G+ R
Sbjct: 327 MGGQGLAPSEFVFSAVITGFCKSG---EVDRALMVWETMVAARVKPNVVLYSAMIDGFAR 383
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
R E E L EM+D IP++ TY+S + G + S R
Sbjct: 384 SGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSR 424
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 47/409 (11%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ I+R L R E S+L+ + C P + + + A K+
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ---------PSV-VTYTVLLEAVCKS 193
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + MR P++ YNV+ING + D A F +R+ +PD V+
Sbjct: 194 TGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ ++ G C K+++ LF EM EK C PN V+F+ L+R F + + + +M
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
GC ++ C I+++ +C +GRV A + + + G P Y +++ LC
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNC 405
A E++ E+ +K P+ + T I L +KG+ +A+ L+E+M + G + VT+N
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICIL--CQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 406 LLEDLCDVGRT--------------------------VDADRL----RLLAS--TKGLDP 433
L+ C GR +A+RL LLA K P
Sbjct: 431 LVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAP 490
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ +T+++LVS + ++ E LV +M++ G P+L TYN+ +DG++N
Sbjct: 491 NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 173/378 (45%), Gaps = 18/378 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F+ D ++ +++ L ++ R+ ++ + + +C E F V F
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK----------NCMPNEVTFDMLVRFF 295
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ + + E M + ++ N++IN K D A F + M PD
Sbjct: 296 CRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+++ ++ G CR ++++ A L +EM K C PN V+FNT I + ++ +
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M E GCE + VT LV+G C +GRV A EL F P Y L+ LC
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---FYSMPCKPNTITYTTLLTGLCNAE 471
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVT 402
A E++ E+ +K P+V+ L+ +KG+ EA L+E+M++ G P+ +T
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFF--CQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N LL+ + + + +A L + G+ PD +TY ++ +RE+R +E + + +
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 463 DEGFIPDLATYNSYMDGL 480
D G P YN + L
Sbjct: 590 DLGMRPKAVIYNKILLAL 607
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 157/335 (46%), Gaps = 8/335 (2%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFD 207
C + + +N K R++D AF+ + + P Y ++ G + ++
Sbjct: 316 CAANTTLCNIVINTICKQGRVDD---AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A MVR P+ VTFN I C+ + A L +M E GC N+V++N L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF + + D + + Y M C+ +++T L+ GLCN R+ A EL+ + ++
Sbjct: 433 NGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + LV C +G A+E+V+++ + G P++I TL++G+ EA L
Sbjct: 490 PNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALEL 549
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ ++ G+ PD VT++ ++ L R +A ++ + G+ P + Y+ ++ +
Sbjct: 550 LHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCK 609
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ M+ G +P+ TY + ++GL+N
Sbjct: 610 RCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLAN 644
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 41/347 (11%)
Query: 177 FEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
+A R+LI P Y +I G +AL D M+ +P VVT+ +L+
Sbjct: 129 LDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C++ F A+ + EMR KGC PN+V++N +I G E + D+ + G +
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD--FDYF-------GLVEK----- 339
+V+ ++ GLC R EL + + +P + FD G+VE+
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308
Query: 340 ---------------------LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+C +G A + ++ + G P I+ TT+++GL R
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ +A L+++M+++ P+ VTFN + LC G A L S G + + +TY
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ LV+G+ + R L M + P+ TY + + GL NA +
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 3/294 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +++L+ F + ++A+ ++M + NI+I+ C+ + D A
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC+P+ +S+ T+++G ++++ + EM+ C + VT + LC
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + +A L+ S G Y LV C +G ALE+ + K P+ I
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTIT 459
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL+ GL + A+ L+ +ML++ P+ VTFN L+ C G +A L
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G P+ +TY+ L+ G T + +E L++ ++ G PD+ TY+S + LS
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 8/327 (2%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGF 200
+N G + C + + +A R D A E +++++ + P+ +N I
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWED---AKELLKEMVRKNCPPNEVTFNTFICIL 400
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
+ ++A ++M + ++VT+N L++GFC + D AL LF M C PN
Sbjct: 401 CQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNT 457
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
+++ TL+ G + D + EM++ C + VT +LV C +G + +A ELV
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
G P Y L++ + + N+ ALE++ L G P ++ +++I L R +
Sbjct: 518 MMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
EA + + G+ P +V +N +L LC T A + G P+ +TY
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 637
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFI 467
L+ G E+ KE +L+ E+ G +
Sbjct: 638 LIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 3/268 (1%)
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
R DV +N L++G+CR + D A L M P+ ++ +IRG +
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVG 162
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E +++ +M+ GC+ S VT +L++ +C +A E++ + +G P Y ++
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+C EG A E ++ L G P ++ TT+++GL ++ + L +M+++ +
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF+ L+ C G A ++ S G + +I+++ ++ R +
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARK 485
+N M G PD +Y + + GL A +
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAER 370
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ +A DR PDV LI CR + A + R G +V ++N
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TL+ G+ + D + M + T ++ GLC+ GRV +A L+ D R
Sbjct: 118 TLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 174
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P Y L+E +C G A+EV+DE+ KG P+++ +I G+ R + +A
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ ++ G PD+V++ +L+ LC R D + L K P+ +T+ +LV
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 445 YTRENRRKEGENLVNEMLDEG 465
+ R + ++ +M G
Sbjct: 295 FCRGGMVERAIQVLEQMSGHG 315
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ V+ F + M++ + E M + P++ YN L++G ++AL +
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEH-GCTPNLITYNTLLDGITNDCNSEEALELLHGL 553
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V + V PD+VT++ +I R + + A+ +F +++ G P V +N ++
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 613
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
D ++ M+ GC + +T L++GL NE + + +L+ + RGVL K+
Sbjct: 614 DGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 668
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A +VD +G P V CT LI L R + +A+ ++ + G D +N L+
Sbjct: 62 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
C G+ +DA R RL+AS + PD TY ++ G R E +L+++ML G P
Sbjct: 122 GYCRYGQ-LDAAR-RLIASMP-VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 178
Query: 469 DLATYNSYMDGLSNA 483
+ TY ++ + +
Sbjct: 179 SVVTYTVLLEAVCKS 193
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA+ L+++ G PD L+ +LC GRT DA R+ A G D Y+ L
Sbjct: 60 AEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL 119
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
V+GY R + L+ M PD TY + GL +
Sbjct: 120 VAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCD 157
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 10/339 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANR--MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCR 204
F P H +N+F NR + + L F+ M + +G RP V Y LING K
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKM--IGEGFRPDVVTYGTLINGLCKVG 147
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
A+ MV+ +P+V +N +I C++++ A LF EM KG +P++ ++N
Sbjct: 148 NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 207
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI ++ + EM++ V+ +VD LC EG+V +A ++V +R
Sbjct: 208 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 267
Query: 325 -GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G +P Y L+ C A+ + E+ ++ +P + +TLI GL + + +
Sbjct: 268 GGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 327
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG--LDPDGMTYHIL 441
A L +M+ +P+ VT+ LL+ LC R + A+ + LL + +G LDPD +I
Sbjct: 328 AIALFHEMVACSQIPNLVTYRILLDYLCK-NRYL-AEAMALLKAIEGSNLDPDIQVNNIA 385
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G R + +L + + +G PD+ TY+ ++GL
Sbjct: 386 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 424
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 179 AMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
A+ K I+G P + + N+ I+G + E + A + + ++PDV T++I+I+G
Sbjct: 365 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 424
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
CR D A LFREM E GC N +NT+ RGF + + + EM+ G +
Sbjct: 425 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 484
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRR 324
T + V L ++G +++ DF ++
Sbjct: 485 STMTLFVKMLSDDGLDQSLKQILRDFCKQ 513
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 33/245 (13%)
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D A+ F M P+ V FN L+ + ++++++M G + T I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++ C+ R G G AL + D++ +G
Sbjct: 102 LINSFCHLNR---------------------------------GKIGEALHLFDKMIGEG 128
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P V+ TLI GL ++ A L+ M+++ P+ +N +++ LC + +A
Sbjct: 129 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 188
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L TKG+ PD TY+ L+ K L+NEM+D +PD+ ++N+ +D L
Sbjct: 189 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 248
Query: 481 SNARK 485
K
Sbjct: 249 CKEGK 253
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ R+ D + F M P++ Y +L++ K R +A+ +
Sbjct: 316 IHGLCHVERLQDAIALFHEMVA-CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 374
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD+ NI I G CR + + A LF + KG P+V +++ +I G DE
Sbjct: 375 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 434
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+ EM E GC + + G +A +L+ + RG
Sbjct: 435 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 479
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 37/364 (10%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ A K + G + M K + +P++ YN I G + D+AL M+
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEMEK--ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK 305
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD T+ +L+ GFC+ K+ A +F M G NPN ++ LI GF E +E
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA------------------------- 314
+ + EMI G + + VT ++ G+ G + KA
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425
Query: 315 ----------CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
CEL+ + R + P F Y L+ LC + A EV+D++ + G P+
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V TLI+ + + A L++ M+ G+LPD +NCL+ LC + +A L +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV 545
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ TY ++ Y++ + E +ML G +P+ Y + G +
Sbjct: 546 DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605
Query: 485 KSVR 488
+V
Sbjct: 606 NTVE 609
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 3/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ V+ F K R + L FE+M G P+ Y LI+GF+K ++AL D
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPS--SGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +K +VVT+N +I G + + A+ LF EM G P+ ++N LI G+
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHD 431
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM S T +L+ GLC+ + KA E++ R GV P F Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ E +A+E++ + G LP + LI GL R +K EA L+ M ++G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P++ T+ + G A+R + G+ P+ + Y IL+ G+ E
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ ML++G IPD+ Y++ + LS K+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 157 FHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ ++K++ M LLA RKL PS Y+VLI+G + KA D
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKL---TPSPFTYSVLISGLCHSSDLQKANEVLD 475
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+R+ VKP+V + LI + + ++++A+ L + M G P++ +N LI G +
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K +E + +M E G + ++ T ++ G + A D G++P + Y
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C GN AL + +KG +P + A + +I L + K EA G+ K LK
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS--GYTRENRRK 452
G++PD +N L+ C G A +L G++P+ + Y+ L++ GY +
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
E L +EM+ +G PD Y +DG
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDG 742
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 3/281 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ +I+ K + +A+G + + ++ V PDV +N LISGFC+ + A L
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 248 FREMREKGCNPNVVSFNTLIR--GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ EM G NPN+V +NTLI G+ E + EMI G IL+DG
Sbjct: 684 YDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 743
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
EG + KA L + ++ V + L++ C G A E+ D++ K P++
Sbjct: 744 GKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 802
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ T LI+ + EA L M I+P+++T+ LL +G L
Sbjct: 803 VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 862
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+G+ D + Y ++ S Y +E + E L+N+ L EG
Sbjct: 863 MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 39/337 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS--GFCRNKKFDLAL 245
P V +YN LI+GF K + +KA YD M+ + + P++V +N LI+ G+C++ A
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAF 718
Query: 246 GLFREMREKGCNPN----------------------------------VVSFNTLIRGFF 271
LF EM KG +P+ + +FN+LI F
Sbjct: 719 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFC 778
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
K E + +M++ + VT IL+D + +A +L +D R ++P
Sbjct: 779 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 838
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ GN + + ++ +G IA + + K +EA L+ K
Sbjct: 839 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 898
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L EGI + F+ L+ LC + L + L T + L+ G+ +
Sbjct: 899 LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 958
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
E ++ M G++P T S D +S R ++
Sbjct: 959 DEASKVLGVMQRLGWVP---TSLSLTDSISTGRDDMK 992
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 116/296 (39%), Gaps = 36/296 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ N L+ +K Y MV ++ PDV T+ +I C+ +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM EK C PN+ ++N I G DE + + M+E G T +LVDG C
Sbjct: 265 LSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ R +A + G+ P F Y L++ EGN AL + DE
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE------------ 371
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
M+ G+ + VT+N ++ + G A L
Sbjct: 372 -----------------------MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G++PD TY++L+ GY + + + L+ EM P TY+ + GL ++
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
R R+ ++ F+I I F + A +F +G P ++ N L+R
Sbjct: 162 RCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ M+E T ++ C G V+K ++V+ + P F Y
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPNLFTYN 280
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+ LC G ALEV + +KG P T L++G + ++ EA + E M
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ T+ L++ G +A R++ T+GL + +TY+ ++ G + +
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
+L NEML G PD TYN +DG
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDG 425
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEK----MLKEGILPDSVTFNCLLEDLCDVG 414
+G P++I C L+ L + GL K M++ I+PD T+ +++ C VG
Sbjct: 201 EGFFPTLICCNNLMRDLLK----ANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVG 256
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ ++ L K P+ TY+ + G + E + M+++G PD TY
Sbjct: 257 DVIKG-KMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYT 315
Query: 475 SYMDGLSNARKS 486
+DG ++S
Sbjct: 316 LLVDGFCKQKRS 327
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 6/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFY 213
F ++A+ K + +F M++ D RP V YNV++ V RE F A Y
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEF-DCRPDVFTYNVILR--VMMREEVFFMLAFAVY 186
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M++ P++ TF IL+ G + + A +F +M +G +PN V++ LI G
Sbjct: 187 NEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQR 246
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+ + YEM G SV L+DG C GR+++A EL+ F + G + Y
Sbjct: 247 GSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY 306
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L A E+ + KK P +I T LI+GL + K +A L+ M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI PD+ +N +++ LC G + L+L S PD T+ IL+ R +E
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E + E+ G P +AT+N+ +DGL +
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 148/333 (44%), Gaps = 15/333 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVR 218
++ F K RM + AFE +R + + Y+ LI+G + R + +A Y M++
Sbjct: 275 LDGFCKLGRMVE---AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD++ + ILI G + K + AL L M KG +P+ +N +I+ G +E
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
G ++ EM E + T IL+ +C G V +A E+ + + G P + L++
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK------ML 392
LC G A ++ ++ + P+ + G R VE+ +++
Sbjct: 452 GLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G PD V++N L+ C G A +L + KGL PD +TY+ L++G R R +
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L D P A Y S M RK
Sbjct: 570 EAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRK 600
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V D F +LIS + + + A+ F M+E C P+V ++N ++R E F
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLA 182
Query: 281 NMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
Y EM++ C + T IL+DGL +GR A ++ D + RG+ P Y L+
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+A A ++ E+ GN P +A L++G +L + VEA L+ K+G +
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
++ L++ L R A L K + PD + Y IL+ G ++ + ++ L++
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
M +G PD YN+ + L
Sbjct: 363 SMPSKGISPDTYCYNAVIKAL 383
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+A V +E+ K P++ L++GL + + +A + + M GI P+ VT+ L+
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G DA +L T G PD + ++ L+ G+ + R E L+ +GF+
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 468 PDLATYNSYMDGLSNARK 485
L Y+S +DGL AR+
Sbjct: 301 LGLRGYSSLIDGLFRARR 318
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 2/316 (0%)
Query: 175 LAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E ++ L++ P+ IYN LING+ + E + A + +M +KPD +T+N LI
Sbjct: 173 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 232
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ ++ A L EM++ G NP V +FNTLI + + ++ + EM E G +
Sbjct: 233 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ V+ +V+ C G++ +A ++ D + VLP Y +++ G A +
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 352
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
V+++ G PS++ LI+GL + EA ++ + ++PD+V++N L+ C
Sbjct: 353 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 412
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A L+ G+ TYH L+SG R E E L +M+ +P A
Sbjct: 413 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472
Query: 473 YNSYMDGLSNARKSVR 488
+N ++ S ++
Sbjct: 473 HNIMVEAYSKYGNEIK 488
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 129/291 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YNV+I G + A+ +D M V P+ +T+N +I G + + L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G PN +++N L+ G + E + EM T IL DGL
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G L + + GV D+ L+ LC +G IA EV+ L G +P+ +
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI G + + A +M I PD +T+N L+ LC R +A L +
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
G++P T++ L+ Y R + ++ +++EM + G P++ +Y S ++
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N KA R+ + A + + ++ D P+V +N LI+ + + + +K
Sbjct: 228 YNALINGLCKAERITN---AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLS 284
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KP+VV++ +++ FC+N K A+ + +M K PN +N +I +
Sbjct: 285 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 344
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G S VT +L+ GLCN+ ++ +A E++ S ++P Y
Sbjct: 345 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 404
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C GN AL++ + K G +V LI GL + E L +KM++
Sbjct: 405 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 464
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++P + N ++E G + A+ LR
Sbjct: 465 NVVPSNAIHNIMVEAYSKYGNEIKAEDLR 493
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 131/291 (45%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+L+NG K + A +V + P V +N LI+G+C+ + + A F +M+ +
Sbjct: 160 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 219
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P+ +++N LI G + ++ EM + G + T L+D G++ K
Sbjct: 220 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 279
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + G+ P Y +V C G A+ ++D+++ K LP+ +I+
Sbjct: 280 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 339
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+A L+EKM GI P VT+N L++ LC+ + +A+ + S L PD
Sbjct: 340 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 399
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++Y+ L+S + +L M G + TY+ + GL A +
Sbjct: 400 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGR 450
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 141/324 (43%), Gaps = 35/324 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF------------------ 228
+P+ YNVL++G + + D M ++ PD T+
Sbjct: 82 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 141
Query: 229 -----------------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+IL++G C++ K +A + + + G P V +NTLI G+
Sbjct: 142 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 201
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + +M + +T L++GLC R+ A +L+++ GV P
Sbjct: 202 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 261
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L++ G V+ E+ + G P+V++ +++ + K EA +++ M
Sbjct: 262 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 321
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +LP++ +N +++ + G A L + G+ P +TY++L+ G +++
Sbjct: 322 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 381
Query: 452 KEGENLVNEMLDEGFIPDLATYNS 475
E E ++N + + IPD +YN+
Sbjct: 382 SEAEEIINSLSNHRLIPDAVSYNT 405
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 36/268 (13%)
Query: 247 LFREMREKGCNP-NVVSFNTLIRGFFGERK-------FDE-------------------- 278
+ R M G P N S+N +I G + + FDE
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 279 --------GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
G + +M+ G + +++T +L+ GLC GR+ + L+ + + + ++P
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
F Y L + L G++ L + + K G C+ L+ GL + K A +++
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
++ G++P V +N L+ C G A ++ + PD +TY+ L++G + R
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMD 478
++L+ EM D G P + T+N+ +D
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLID 268
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
DH T+ ++ L + R + +L + N P +E F+ ++A+ +
Sbjct: 224 DHITYNALINGLCKAERITNAQDLLMEMQDNGVN---------PTVE-TFNTLIDAYGRT 273
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ + M++ +G +P+V Y ++N F K + +A+ D M V P+
Sbjct: 274 GQLEKCFIVLSEMQE--NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 331
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N +I + + D A L +M+ G +P++V++N LI+G + + E + +
Sbjct: 332 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 391
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+V+ L+ C G + KA +L + G+ Y L+ L G G
Sbjct: 392 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 451
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+ ++ + +PS ++E + ++A L ++ML++
Sbjct: 452 NEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++ + + + M D P+ +YN +I+ +V+ D+A ++M +
Sbjct: 302 VNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P +VT+N+LI G C + A + + P+ VS+NTLI D+ +
Sbjct: 361 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 420
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M + G + + T L+ GL GR+ + L + V+P + + +VE
Sbjct: 421 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 480
Query: 341 CGEGNAGIALEVVDELWKKGN 361
GN A ++ E+ +K N
Sbjct: 481 SKYGNEIKAEDLRKEMLQKRN 501
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 149/293 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y LI + K +++ Y +M+ + + PDVVT + ++ GFCR+ K A
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LFREM E G +PN VS+ T+I F + E N+ +M+ G F VTC ++DGL
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ +A E+ + + P Y L++ C G +A V+ ++ K+ P+VI
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+++I G + +A ++ +M++ ++P+++ + L++ G AD
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ L+ + + IL++ R R E +L+ +M +G PD+ Y S +DG
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDG 610
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 62/415 (14%)
Query: 108 DHTTFLFIVRSLASSYRFSE---LHS--VLNFISANPCPCSN--DGIFSCPEMERIFHFA 160
+H ++ I+ SL S R E L S V+ IS + C+ DG+F
Sbjct: 390 NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF------------ 437
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
K + + FE + KL + P+ Y+ L++G+ K + + A +M ++
Sbjct: 438 -----KVGKTKEAEEVFETILKL-NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 491
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+V+TF+ +I+G+ + A+ + REM ++ PN + + LI G+F + D
Sbjct: 492 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVAD 551
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E S+V +IL++ L GR+ +A L+ID +G+ P +Y L++
Sbjct: 552 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EGN AL +V E+ +K V+A LI+GL RL K + + +M++ G+ PD
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDC 670
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG---------------- 444
+T+N ++ C G+T DA + + G+ P+ +TY+IL+ G
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFL 730
Query: 445 ---YTRENRR-----------------KEGENLVNEMLDEGFIPDLATYNSYMDG 479
Y+R + K + +++EM+ G DL TYN+ + G
Sbjct: 731 VKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRG 785
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 25/320 (7%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V NVL++ K + D ALG+ D V D VT+N +I GFC+ D GL
Sbjct: 127 PDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184
Query: 248 FREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
EM ++G + ++ N L++G+ G ++ E V Y +++ G + L+DG
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWV--MYNLVDGGVTKDVIGLNTLIDGY 242
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL---WK---- 358
C + +A EL+ + R V Y L++ C G+ A + +E+ WK
Sbjct: 243 CEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302
Query: 359 ------------KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
K P+++ TTLI + E+ L +KM+ GI+PD VT + +
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSI 362
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C G+ +A L GLDP+ ++Y +++ + R E NL ++M+ G
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422
Query: 467 IPDLATYNSYMDGLSNARKS 486
D+ T + MDGL K+
Sbjct: 423 SFDIVTCTTVMDGLFKVGKT 442
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 166/358 (46%), Gaps = 29/358 (8%)
Query: 150 CPEMER--------IFHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGF 200
C EM+ IF +N + RM++ L + K ID P + Y LI+G+
Sbjct: 554 CKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGID--PDIVNYASLIDGY 611
Query: 201 VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
K AL M ++ DVV +N LI G R K+D R M E G P+
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSR-MIELGLAPDC 670
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV---LKACEL 317
+++NT+I + + K ++ +++ EM G ++VT IL+ GLC G V + L
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFL 730
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE----VVDELWKKGNLPSVIACTTLIE 373
V +SR K + EKL +G+ L+ V+DE+ K+G ++ LI
Sbjct: 731 VKAYSRS---EKADKILQIHEKLVA---SGLELKRQKVVLDEMVKRGISADLVTYNALIR 784
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG----RTVDADRLRLLASTK 429
G +A +M +GI P+ T+N LL L + G + ++L + +
Sbjct: 785 GYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNER 844
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
GL P+ TY ILVSGY R RK+ L EM+ +GF+P L TYN + + + K +
Sbjct: 845 GLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 902
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 23/334 (6%)
Query: 173 GLLAFE--AMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
GL+ + M L+DG + + N LI+G+ + +A + R VK D+VT+
Sbjct: 211 GLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTY 270
Query: 229 NILISGFCRNKKFDLALGLFREM-------------------REKGCNPNVVSFNTLIRG 269
N L+ FC+ A LF E+ K P +V++ TLI
Sbjct: 271 NTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAA 330
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ +E ++ +MI G VTC ++ G C G++ +A L + G+ P
Sbjct: 331 YCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPN 390
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ L G A + ++ +G ++ CTT+++GL ++ K EA + E
Sbjct: 391 HVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFE 450
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+LK + P+ VT++ LL+ C +G+ A+ + + + P+ +T+ +++GY ++
Sbjct: 451 TILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +++ EM+ +P+ Y +DG A
Sbjct: 511 MLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKA 544
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K R + + FE M +++ P + N+++N + + +A F +M++
Sbjct: 89 LSVIAKMKRFDVVISLFEQM-QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VTF L+ GFC + + AL LF ++ G PNVV++ TLI R + V
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M + G + VT LV GLC GR A L+ D +RG+ P + L++
Sbjct: 208 EIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G A E+ + + P V T LI GL + EA + M G P+
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L+ C R D ++ S KGL + +TY +L+ GY R + + N+
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M PD+ TYN +DGL
Sbjct: 388 MGSRRAPPDIRTYNVLLDGL 407
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 36/344 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F NR+ D L F+ + + RP+V Y LI+ K R + A+ +++M +
Sbjct: 159 LHGFCHWNRIEDALALFDQIVGM-GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG 217
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+VVT+N L+SG C ++ A L R+M ++G PNV++F LI F K E
Sbjct: 218 IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MI++ T L++GLC GR+ +A ++ G P + Y L+
Sbjct: 278 ELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGF 337
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL------------------RR----- 377
C ++ E+ +KG + + I T LI+G RR
Sbjct: 338 CKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDI 397
Query: 378 -----LRKGVEASGLMEK-------MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
L G+ +G +EK M K + + VT+ +++ +C VG+ DA L
Sbjct: 398 RTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCS 457
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+KG+ P+ +TY ++SG+ R E + L +M ++GF+P+
Sbjct: 458 LFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +++ RP SI + L++ K + FD + +++M + P + T NI+++
Sbjct: 66 ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMN 125
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
CR+ + A +M + G P++V+F +L+ GF + ++ + + +++ +G
Sbjct: 126 CVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRP 185
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+ LC + A E+ G+ P Y LV LC G A ++
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLL 245
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ K+G P+VI T LI+ ++ K +EA L + M++ + PD T+ L+ LC
Sbjct: 246 RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY 305
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
GR +A ++ L + G P+ +TY L+ G+ + R ++G + EM +G + + TY
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITY 365
Query: 474 NSYMDG 479
+ G
Sbjct: 366 TVLIQG 371
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+F++AL + RMV R P +V F L+S + K+FD+ + LF +M+ G +P + + N
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
++ + +M++LG E VT L+ G C+ R+ A L
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P Y L+ LC + A+E+ +++ G P+V+ +L+ GL + + +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ L+ M+K GI P+ +TF L++ VG+ ++A L + + PD TY L++G
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R E + M G+ P+ TY + + G +++
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR 342
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%)
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
N +F+ AL LF M P++V F L+ ++FD +++ +M LG T
Sbjct: 60 NLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYT 119
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
C I+++ +C + +A + + G P + L+ C AL + D++
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
G P+V+ TTLI L + R A + +M GI P+ VT+N L+ LC++GR
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
DA L +G+ P+ +T+ L+ + + + E + L M+ PD+ TY + +
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299
Query: 478 DGL 480
+GL
Sbjct: 300 NGL 302
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRD 219
++ F K+ R+ DG F M + G + +I Y VLI G+ D A +++M
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQ--KGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSR 391
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
R PD+ T+N+L+ G C N + AL +F+ MR++ + N+V++ +I+G K ++
Sbjct: 392 RAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDA 451
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
++ + G + + +T ++ G C G + +A L G LP +
Sbjct: 452 FDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 6/294 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN ++ G +++++A M+R+ P+ VTF I FC+N D A+ L
Sbjct: 5 PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + GC P+V+ ++TL+ GF + DE + + M+ C ++V + GLC
Sbjct: 65 LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCI 121
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR + EL+ + R+ P D + L+ LC A+EV++++ K G +P V++
Sbjct: 122 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVS 181
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I + +A L++ ML + PD+++FN +L+ LC R DA L
Sbjct: 182 YNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKML 238
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
K + MT++IL+ + + K+ + M +PD+ TY+S ++G S
Sbjct: 239 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 292
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 12/330 (3%)
Query: 157 FHFAVNAFVKANRMND-GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ A+ A R + G L E +RK D P+ + ++ LIN + R + A+ ++
Sbjct: 112 YNAALKGLCIAGRWEEVGELIAEMVRK--DCPPNDATFSTLINSLCQNRLVEYAVEVLEQ 169
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + PDVV++N +IS F + D AL L + M C P+ +SFN +++ ++
Sbjct: 170 MQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKR 226
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + V + +M++ C + +T IL+D LC G+V A E+ + +P Y
Sbjct: 227 WYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSS 286
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ +G +A ++ + + ++ S A ++GL + +A L+ M+ E
Sbjct: 287 LINGFSEQGLDEMAFDLFRSMPCRADIFSYNA---TLKGLCMAARWDDAGELIADMVTED 343
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
LP+ VTFN L+ LC G A + G+ PD TY+ L++GY+ + R +
Sbjct: 344 CLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDAL 403
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ M E PD +YNS + GL A +
Sbjct: 404 KFLSTMPCE---PDTISYNSILKGLCRAER 430
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 7/247 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + KA R D + M K D R + +N+LI+ + + A+ ++ M
Sbjct: 214 FNAVLKCLCKAKRWYDAVELVAKMLKK-DCRINEMTFNILIDSLCQNGQVKDAIEVFELM 272
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ R PD+VT++ LI+GF ++A LFR M C ++ S+N ++G ++
Sbjct: 273 PKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARW 329
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + +M+ C + VT IL+ LC +G V +A ++ + G+ P F Y L
Sbjct: 330 DDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNAL 389
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +G AL+ + + + P I+ ++++GL R + +A L+ +ML++
Sbjct: 390 INGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNC 446
Query: 397 LPDSVTF 403
P+ VTF
Sbjct: 447 TPNEVTF 453
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ T ++ GLC + +A EL+ + R P + + + C G A+E+++
Sbjct: 7 TYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLE 66
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ K G P VI +TL+ G + EA L+ ML P++V +N L+ LC G
Sbjct: 67 QMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAG 123
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R + L K P+ T+ L++ + + ++ +M G++PD+ +YN
Sbjct: 124 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 183
Query: 475 SYMDGLSNARKS 486
+ + S+ ++
Sbjct: 184 TIISCFSDQARA 195
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 163/320 (50%), Gaps = 20/320 (6%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
+++ + K +ND AF+ +++ P+V Y+ LI+GF + A+ +
Sbjct: 197 MYNTVIYGMCKDKHVND---AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLF 253
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++++ + +KPD TFNIL+ GFC+++K +F M ++G P+VV++N+L+ G+
Sbjct: 254 NKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLV 313
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
++ + ++ M + G + IL++G C +V KA L + + ++P Y
Sbjct: 314 KEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTY 373
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L G AL++VD++ +G P+++ ++I+ L + + +A L+ K
Sbjct: 374 NSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKD 433
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI P T+ L++ LC V +G D TY++++ G+ ++ E
Sbjct: 434 QGIQPSMYTYTILIDGLCKV---------------EGYDITVNTYNVMIHGFCKKGLFDE 478
Query: 454 GENLVNEMLDEGFIPDLATY 473
+L+++M D IP+ TY
Sbjct: 479 ALSLLSKMKDSSCIPNAVTY 498
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 145/288 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LI+G K E AL R+ V+ + V +N +I G C++K + A L+ EM
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMV 222
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +PNVV+++ LI GFF K + +++ ++I + T ILVDG C + ++
Sbjct: 223 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 282
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ + ++G++P Y L++ C A + + + + G P + + LI
Sbjct: 283 EGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 342
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++K +A L +M + I+P+ VT+N L++ L GR A +L +G+
Sbjct: 343 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVP 402
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ +TY+ ++ + ++ + L+ + D+G P + TY +DGL
Sbjct: 403 PNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 450
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 39/318 (12%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+ ++R++R P FN ++ ++K + L L ++M +G PN+ + N
Sbjct: 66 DVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCN 125
Query: 265 TLIRGFFGERKFDEGVNMAY----EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
LI F ++ A+ +++ LG V+ L+ GLC G A +L+
Sbjct: 126 ILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR 185
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI-------- 372
+ V Y ++ +C + + A ++ E+ KG P+V+ + LI
Sbjct: 186 VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGK 245
Query: 373 ---------------------------EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
+G + RK E + M+K+GI+PD VT+N
Sbjct: 246 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNS 305
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ C V A + + G++PD +Y+IL++G+ + + + NL NEM +
Sbjct: 306 LMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKN 365
Query: 466 FIPDLATYNSYMDGLSNA 483
IP++ TYNS +DGLS +
Sbjct: 366 IIPNVVTYNSLIDGLSKS 383
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
K + ++++ + F N D A+ LF + + P FN ++ + + ++
Sbjct: 48 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR----GVLPKDFDYFGLV 337
++ +M G + + C IL+ C G + F + G Y L+
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC G AL+++ + K + + T+I G+ + + +A L +M+ +GI
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VT++ L+ VG+ DA L + + PDG T++ILV G+ ++ + KEG+ +
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287
Query: 458 VNEMLDEGFIPDLATYNSYMDGLS-----NARKSVRQT 490
M+ +G IPD+ TYNS MDG N KS+ T
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNT 325
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
R ++ +N F K +++ + F M + +I P+V YN LI+G K AL
Sbjct: 336 RSYNILINGFCKIKKVDKAMNLFNEMHCKNII---PNVVTYNSLIDGLSKSGRISYALQL 392
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN------------- 259
D+M V P+++T+N +I + + D A+ L + +++G P+
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452
Query: 260 -------VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
V ++N +I GF + FDE +++ +M + C ++VT EI + L +
Sbjct: 453 VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNEND 512
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
KA +L + RG+L + Y C +L +V W
Sbjct: 513 KAEKLFREMITRGLLNRSASY------PCSSMKIHQSLTMVQHTW 551
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 155/327 (47%), Gaps = 11/327 (3%)
Query: 164 FVKANRMNDGLLAFEAMRKLID---------GRPSVSIYNVLINGFVKCREFDKALGFYD 214
V N + +GL + + K +D P+ Y +L++G K ++A+
Sbjct: 10 IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R ++ DVV ++ LISGFC D LF EM EKG +PNVV ++ LI GF +
Sbjct: 70 EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG 129
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + + M E G + T ++ GLC +GR KA +L + +G P Y
Sbjct: 130 LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYN 189
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC EG G A ++ + + +KG V++ TLI GL K EA L +L++
Sbjct: 190 VLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED 249
Query: 395 G--ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G + PD +TFN +++ LC GR A + +G + T HIL+ Y +
Sbjct: 250 GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIID 309
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + G +P TY+ +DG
Sbjct: 310 KAMELWKRVHKLGLVPSSTTYSVMIDG 336
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 2/293 (0%)
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
K I+ P + YN +ING K + +KA+ M +P+ T+ IL+ G C+ +
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ A+ L EM+ KG +VV ++TLI GF + D G + EM+E G + V L
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++G C +G +A ++ + RG+ P + Y ++ LC +G A AL++ D + +KG
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
PS + LI GL + +A + E ML++G + V++N L+ LC+ G+ +A +
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241
Query: 422 L--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
L LL ++PD +T++ ++ G +E R + + + M++ G +L T
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 148/328 (45%), Gaps = 3/328 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F K + M + +P V Y +I G K KAL +D
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTER-GIQPDVYTYTCMIGGLCKDGRARKALDLFDL 175
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +P VT+N+LI+G C+ A +F M EKG VVS+NTLI G K
Sbjct: 176 MTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK 235
Query: 276 FDEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE + + ++E G E +T ++ GLC EGR+ KA E+ RG F
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTC 295
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ + G A+E+ + K G +PS + +I+G ++ A GL +M
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ P +N L+ LC A RL +PD ++++I++ G +
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L+N+M G PD TY+S+++ LS
Sbjct: 416 AKELLNDMQQMGLTPDAYTYSSFINRLS 443
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 160/333 (48%), Gaps = 9/333 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ F ++ G F+ M K I P+V +Y+ LINGF K + +A
Sbjct: 82 VYSTLISGFCSKGCLDRGKALFDEMLEKGIS--PNVVVYSCLINGFCKKGLWREATAVLH 139
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++PDV T+ +I G C++ + AL LF M EKG P+ V++N LI G E
Sbjct: 140 TMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEG 199
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG--VLPKDFD 332
+ + M+E G V+ L+ GLCN G++ +A +L G V P
Sbjct: 200 CIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVIT 259
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEK 390
+ +++ LC EG A+E+ D + ++G+ ++ C LI ++ G+ +A L ++
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG--EYIKSGIIDKAMELWKR 317
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ K G++P S T++ +++ C + A L GL P Y+ L++ +E+
Sbjct: 318 VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESS 377
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
++ L EM + PD ++N +DG A
Sbjct: 378 LEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 158/360 (43%), Gaps = 38/360 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ K R L F+ M + + PS YNVLING K A ++ M+
Sbjct: 157 IGGLCKDGRARKALDLFDLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVSFNTLIRGFFGERKFDE 278
+ +VV++N LI G C N K D A+ LF + E G P+V++FNT+I+G E + D+
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL------------------VID 320
V + MIE G + TC IL+ G + KA EL +ID
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335
Query: 321 --------------FSR---RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
FSR G+ P FDY L+ LC E + A + E+ + P
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I+ +I+G + A L+ M + G+ PD+ T++ + L +G+ +A
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF 455
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G+ PD Y L+ G+ + +E NL+ +M D G I DL NS + L N+
Sbjct: 456 DSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNS 515
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 125/228 (54%)
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P++VS+NT+I G E++ ++ V++ EM CE +S T IL+DGLC EGRV +A L
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + R+G+ Y L+ C +G + DE+ +KG P+V+ + LI G +
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
EA+ ++ M + GI PD T+ C++ LC GR A L L + KG +P +T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
Y++L++G +E + + ML++G ++ +YN+ + GL N K
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK 235
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + K + + F+ M++ + P +N++I+G +K + A + M
Sbjct: 365 YNTLMASLCKESSLEQARRLFQEMKE-SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + PD T++ I+ + + + A G F M G P+ +++LI+GF +
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEI 483
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+E +N+ +M ++G ++ LCN L EL+ +FS
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFS 529
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 172/410 (41%), Gaps = 50/410 (12%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F D ++ ++ L + R E + G P+M ++ V
Sbjct: 41 FAQDVVSYATLIEGLCEAGRIDEAVELF-------------GEMDQPDM-HMYAALVKGL 86
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
A R +GLL M++L RPS Y +++ + R+ +A M + P
Sbjct: 87 CNAERGEEGLLMLRRMKEL-GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC 145
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVT +I+ +C+ + AL + M+ +GC PNV ++N L++GF E K + + +
Sbjct: 146 VVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLN 205
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M G +VT +L+ G C +G + A L+ G++ + Y L+ LC +G
Sbjct: 206 KMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDG 265
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A + D L +G P+ + +LI GL + K A +EKM+ G PD+ T++
Sbjct: 266 RTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYS 325
Query: 405 CLLEDLCD----------VGRTVDAD-------------------RLRLLAST------K 429
+E LC +G + D L+A T
Sbjct: 326 SFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSS 385
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G +PD +TY + Y E R E EN++ EM G D YN+ MDG
Sbjct: 386 GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 435
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 4/300 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP +N LI G+ + + D A +D+M DVV++ LI G C + D A+
Sbjct: 7 RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVE 66
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM + P++ + L++G + +EG+ M M ELG S+ +VD C
Sbjct: 67 LFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRC 122
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E + +A E++ + +G+ P ++ C EG AL V++ + +G P+V
Sbjct: 123 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++G K +A L+ KM G+ PD+VT+N L+ C G A RL L
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
GL D TY+ L++ ++ R + +L + + G P+ T+NS ++GL + K+
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 1/313 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+NA+ K RM+D L E M KL +P+V YN L+ GF + KA+ ++M
Sbjct: 153 INAYCKEGRMSDALRVLELM-KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 211
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD VT+N+LI G C + + A L R M G + ++N LI + + D+
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 271
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ + G + ++VT L++GLC G+ A + + G P + Y +E L
Sbjct: 272 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 331
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + L + E+ +K PS + T +I L + R + +M+ G PD
Sbjct: 332 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 391
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ + C GR +A+ + + S G+ D M Y+ L+ G+ + +++ +
Sbjct: 392 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 451
Query: 461 MLDEGFIPDLATY 473
M +P+ TY
Sbjct: 452 MTSVASVPNQFTY 464
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR +PD TFN LI G+CR + D+A LF +M +G +VVS+ TLI G +
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE V + EM + + LV GLCN R + ++ G P Y
Sbjct: 61 IDEAVELFGEMDQPDMHMYAA----LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+V+ C E A A E++ E+++KG P V+ CT +I + + +A ++E M G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ T+N L++ C+ G+ A L G++PD +TY++L+ G + +
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L+ M +G I D TYN+ ++ L
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINAL 261
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 18/341 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NA K R + F+++ +P+ +N LING K + D A F ++M
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 312
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD T++ I C+ K L EM +K P+ V++ +I ER +
Sbjct: 313 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 372
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
EM+ GC VT + C EGR+ +A ++++ S+ GV Y L
Sbjct: 373 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 432
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR--------------KGV 382
++ G A+ ++ ++ ++P+ L+ L R+R K +
Sbjct: 433 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI 492
Query: 383 EAS---GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
E + GL + M K LP+S T++ +LE + GRT +A L L + + Y
Sbjct: 493 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYT 552
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
LV+ + + R + LV M+ GFIP L +Y + GL
Sbjct: 553 ALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 593
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 152/343 (44%), Gaps = 22/343 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N K+ + + +A++ + K++ P Y+ I K + + L F
Sbjct: 289 FNSLINGLCKSGKAD---IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 345
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ VKP V + I+I + + + L + EM GCNP+VV++ T +R + E
Sbjct: 346 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 405
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E N+ EM + G ++ L+DG + G+ A ++ + +P F YF
Sbjct: 406 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 465
Query: 335 ---------GLVEKLCGEGNAGI--ALEVVD-----ELWKKGN-LPSVIACTTLIEGLRR 377
LVE + AG+ A+E+ D ++ KK LP+ ++++EG
Sbjct: 466 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 525
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA+ L+ M ++ I + + L+ C R +DA L G P M+
Sbjct: 526 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMS 585
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y L+SG E + + + + + + PD + +DGL
Sbjct: 586 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 628
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 121/302 (40%), Gaps = 9/302 (2%)
Query: 82 LHHHPQFTHYDFHIFAWASTIDSFRH-DHTTFLFIVRSLASSYRFSELHSVLNFISANPC 140
+H + +Y W + S + D T+ +R+ R +E +VL +S N
Sbjct: 363 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 422
Query: 141 PCSN-------DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY 193
DG S + + + + + F +R L+ R +
Sbjct: 423 TVDTMAYNTLMDGHASIGQTDHAVSI-LKQMTSVASVPNQFTYFILLRHLVRMRLVEDVL 481
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+ G K E G +D M ++ P+ T++ ++ GF + + + A L M+E
Sbjct: 482 PLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 541
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ N + L+ F +++ + + MI+ G ++ + L+ GL EG+ K
Sbjct: 542 DSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDK 601
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A E+ ++ + P + + +++ L +G++ I+ E++ L + PS L E
Sbjct: 602 AKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTE 661
Query: 374 GL 375
L
Sbjct: 662 EL 663
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 45/365 (12%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ D A + +RK IDGR P+V +Y+ +I+ K + +A G + M + DV
Sbjct: 424 KIGDTRGAIKLLRK-IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 482
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE------- 278
VT++ LI GFC K A+GL EM K NP+V ++ L+ E K E
Sbjct: 483 VTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAV 542
Query: 279 ------------------GVNMAYEMIELGCEFSSV----------TCEILVDGLCNEGR 310
G + YE+ + F+++ T IL++G C
Sbjct: 543 MLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKM 602
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V +A L + ++ ++P Y LV+ LC G +++DE+ +G VI +
Sbjct: 603 VDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS 662
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+GL + +A L KM +GI P++ TF LL+ LC GR DA + TKG
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL------SNAR 484
D Y++++ G+ ++ +E ++++M + G IP+ T++ ++ L A
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782
Query: 485 KSVRQ 489
K +RQ
Sbjct: 783 KLLRQ 787
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 181/400 (45%), Gaps = 29/400 (7%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSN--------DGIFSCPEMERIFH---- 158
T+ +V +L + E SVL + C SN DG F E+++ H
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLA-VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNA 263
Query: 159 --------------FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
+N F K R++ L F+ M ++ P + +N +++ F K +
Sbjct: 264 MSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM--ILSRFPPIIQFNKILDSFAKMK 321
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ A+ R+ ++PD+ T NILI+ FC + + ++ ++G P+ V+ N
Sbjct: 322 HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLN 381
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
TLI+G + + + ++ +++ G + + V+ L++G+C G A +L+ R
Sbjct: 382 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 441
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
P Y +++ LC A + E+ KG V+ +TLI G + K EA
Sbjct: 442 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
GL+ +M+ + I PD T+ L++ L G+ +A + + + PD TY+ L++G
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
Y K+ +++ N M G PD+ TY ++G ++
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 137/279 (49%), Gaps = 5/279 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R + V+A K ++ + M K +P V YN L+NG++ E KA ++
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKAC-VKPDVFTYNTLMNGYLLVYEVKKAQHVFN 576
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M V PDV T+ ILI+GFC++K D AL LF+EM +K P+ V++++L+ G
Sbjct: 577 AMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSG 636
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ ++ EM + G +T L+DGLC G + KA L +G+ P F +
Sbjct: 637 RISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT 696
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKML 392
L++ LC G A EV +L KG V +I G ++G+ EA ++ KM
Sbjct: 697 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYG--HCKQGLLEEALTMLSKME 754
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+ G +P++VTF+ ++ L A++L +GL
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 158/329 (48%), Gaps = 2/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+A K ++ + M K + +V Y+ L++G+ E KA ++ M
Sbjct: 206 YNILVDALCKEGKVKEAKSVLAVMLKAC-VKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDV ++NI+I+GFC+ K+ D AL LF+EM P ++ FN ++ F + +
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHY 323
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
V++++ + G + T IL++ C+ G++ ++ +RG P L
Sbjct: 324 STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTL 383
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC +G AL D+L +G + ++ TLI G+ ++ A L+ K+
Sbjct: 384 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT 443
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ ++ +++ LC +A L + KG+ D +TY L+ G+ + KE
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+NEM+ + PD+ TY +D L K
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEGK 532
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 135/280 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y +L++ K + +A M++ VKPDV T+N L++G+ + A +
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M G P+V ++ LI GF + DE +N+ EM + +VT LVDGLC
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +L+ + RG Y L++ LC G+ A+ + +++ +G P+
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L++GL + + +A + + +L +G D +N ++ C G +A +
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G P+ +T+ I+++ +++ + E L+ +M+ G +
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 151/329 (45%), Gaps = 8/329 (2%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
R+ D A + +RK IDGR P+V +YN +I+ K + +A G + M + +V
Sbjct: 110 RIGDTRAAIKFLRK-IDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT++ LI GFC K ALGL M K NPNV ++N L+ E K E ++
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M++ + + +T L+DG V KA + S GV P Y ++ C
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
AL + E+ P +I +++ +++ A L ++ +GI PD T N
Sbjct: 289 VDKALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNI 347
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L+ C +G+ + +G P +T + L+ G + + K+ + +++L +G
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 407
Query: 466 FIPDLATYNSYMDG---LSNARKSVRQTR 491
F + +Y + ++G + + R +++ R
Sbjct: 408 FQLNQVSYATLINGVCKIGDTRGAIKLLR 436
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 34/327 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P N LI G + +AL F+D+++ + + V++ LI+G CR A+
Sbjct: 61 PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R++ + PNV +NT+I + E + EM G + VT L+ G C
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A L+ + + P Y LV+ LC EG A V+ + K +VI
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL----- 422
+TL++G + + +A + M G+ PD ++N ++ C + R A L
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300
Query: 423 -----------RLLAS------------------TKGLDPDGMTYHILVSGYTRENRRKE 453
++L S KG+ PD T +IL++ + +
Sbjct: 301 LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
G +++ ++L G+ P T N+ + GL
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGL 387
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 119/243 (48%)
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
++L + ++ ++G P+ V+ NTLI+G + + E ++ +++ G + + V+ L+
Sbjct: 46 VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+G+C G A + + R P Y +++ LC A + E+ KG
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+V+ +TLI G + K EA GL+ M+ + I P+ T+N L++ LC G+ +A +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ + + +TY L+ GY K+ +++ N M G PD+ +YN ++G
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285
Query: 483 ARK 485
++
Sbjct: 286 IKR 288
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 171/359 (47%), Gaps = 35/359 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + N++ D ++ F+ + + P+ +Y ++NG K +K L M
Sbjct: 135 FNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIM 194
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ KPDV T++I+I C++ D A+ L EM++K PN+ ++N+LI G ++
Sbjct: 195 EQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQW 254
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + EM+ L + T IL+DGLC EG+V A E++ +GV P Y +
Sbjct: 255 EKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAI 314
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G A V + L KG P++ + + LI G + + +A L ++ ++G+
Sbjct: 315 MDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGL 374
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADR-----LRL-------LAST-------KGLDPDGMT 437
PD+VT++ +L L +VGR DA + LR+ L ST GL + M
Sbjct: 375 KPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAML 434
Query: 438 ----------------YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y ++++G + +R +E + ++ G IPD+ TYN + G
Sbjct: 435 LFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGF 493
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 6/307 (1%)
Query: 177 FEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
F MR L G P S SI N++ N + D A ++ + +VVTFN L+ G
Sbjct: 85 FREMRIL--GIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGL 142
Query: 236 CRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
K A+ LF+++ REK C PN V + T++ G +R E ++E G
Sbjct: 143 FAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNG-LSKRGHTEKTLSLLRIMEQGNTKP 201
Query: 295 SV-TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
V T I++D LC + + A L+ + ++ + P F Y L++ LC G ++
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLL 261
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ P+V + LI+GL + K +A +M M+++G+ PD +T++ +++ C
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ A R+ + KG+ P+ +Y IL++GY ++ + L E+ +G PD TY
Sbjct: 322 GQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381
Query: 474 NSYMDGL 480
++ + GL
Sbjct: 382 STILHGL 388
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 158/353 (44%), Gaps = 36/353 (10%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R + ++A K ++ + M++ + P++ YN LI+G K +++K
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEMKQK-NIPPNIFTYNSLIDGLCKLGQWEKVKTLLS 262
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV + P+V TF+ILI G C+ K + A + R M EKG P++++++ ++ G+
Sbjct: 263 EMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRG 322
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D + + + G + + + IL++G C + + KA +L + S++G+ P Y
Sbjct: 323 QVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYS 382
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG----------------LRRL 378
++ L G G A ++ DE+ + G P + +TL+ G L R
Sbjct: 383 TILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERN 442
Query: 379 RKGV-------------------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
R+ EA + EK+ G++PD T+N ++ C G +
Sbjct: 443 REDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEV 502
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ G + +TY++++ G+ R N+ E + + EM GF D T
Sbjct: 503 KGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATT 555
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 36/310 (11%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR------------- 252
D A+ + RMVR + P V+ F+ L K + + LFREMR
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 253 ----------------------EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-EL 289
+ G NVV+FNTL+ G F E K + V + +++ E
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
CE + V +++GL G K L+ + P Y +++ LC + N A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ +++E+ +K P++ +LI+GL +L + + L+ +M+ I P+ TF+ L++
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G+ DAD + KG++PD +TY ++ GY + + N + D+G P+
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342
Query: 470 LATYNSYMDG 479
+ +Y+ ++G
Sbjct: 343 IFSYSILING 352
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++S Y V+ING K +A ++++ + PDV T+N++I+GFCR FD G+
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
R+M + GC N +++N +++GFF K E V+ EM G F + T +L++ L
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563
>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 567
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 9/331 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGF 212
+++ ++ K + + L F M +++ P+V YN LI G C E + + +G
Sbjct: 190 VYNAILDGLCKRGLVGEALGLFYEM-GVVNVEPNVVTYNCLIQGL--CGEVGGWREGVGL 246
Query: 213 YDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ MV ++ + PDV TF+IL++GFC+ A + M G NVV++N+LI G+
Sbjct: 247 FNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYC 306
Query: 272 GERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ +E V + M+ G C S VT L+ G C +V KA L+ + +G+ P
Sbjct: 307 LRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPD 366
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + L+ G A E+ + +G +P + C +++GL + EA L
Sbjct: 367 VFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFR 426
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M K G+ D V +N +L+ +C +G+ DA +L KGL D T++I++ G RE
Sbjct: 427 AMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREG 486
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ E L+ +M + G P+ +YN ++ GL
Sbjct: 487 LLDDAEELLRKMKENGCPPNKCSYNVFVQGL 517
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 17/345 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVL------INGFVKCREFDKAL 210
+ +N + + G M K I P++ N + +NG K + AL
Sbjct: 115 LNILINCLCRLRKTTLGFAVLGLMTK-IGLEPTLVTLNTIANGLCIVNGLCKIGDTSGAL 173
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+MV+ ++P+VV +N ++ G C+ ALGLF EM PNVV++N LI+G
Sbjct: 174 ESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGL 233
Query: 271 FGE-RKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
GE + EGV + EM+ E G T ILV+G C EG +L+A +V R GV
Sbjct: 234 CGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVEL 293
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN--LPSVIACTTLIEGLRRLRKGVEASG 386
Y L+ C A+ V D + ++G LPSV+ +LI G +++K +A
Sbjct: 294 NVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMS 353
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+ +M+ +G+ PD T+ L+ +VG+ + A L + +G P T +++ G
Sbjct: 354 LLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLY 413
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG------LSNARK 485
+ E L M G D+ YN +DG L++ARK
Sbjct: 414 KCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARK 458
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 2/287 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +++L+NGF K +A M+R V+ +VVT+N LISG+C + + A+ +
Sbjct: 258 PDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRV 317
Query: 248 FREM-RE-KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
F M RE +GC P+VV++N+LI G+ +K ++ +++ EM+ G + T L+ G
Sbjct: 318 FDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGF 377
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G+ L A EL I +G +P +++ L A+ + + K G +
Sbjct: 378 FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI 437
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +++G+ ++ K +A L+ +L +G+ DS T+N +++ LC G DA+ L
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G P+ +Y++ V G R+ + M D+GF D T
Sbjct: 498 MKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATT 544
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 34/303 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK-PDVVTFNILISGFCRNKKFDLALG 246
P + +N+L K + F A+ + + DV T NILI+ CR +K L
Sbjct: 74 PCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFA 133
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M + G P +V+ NT+ G +V+GLC
Sbjct: 134 VLGLMTKIGLEPTLVTLNTIANGL-----------------------------CIVNGLC 164
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G A E + +R + P Y +++ LC G G AL + E+ P+V+
Sbjct: 165 KIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVV 224
Query: 367 ACTTLIEGLRRLRKGV-EASGLMEKMLKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
LI+GL G E GL +M+ E GI+PD TF+ L+ C G + A+ +
Sbjct: 225 TYNCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVG 284
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML--DEGFIPDLATYNSYMDGLSN 482
G++ + +TY+ L+SGY NR +E + + M+ EG +P + TYNS + G
Sbjct: 285 FMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCK 344
Query: 483 ARK 485
+K
Sbjct: 345 VKK 347
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ + NRM + + F+ M + +G PSV YN LI+G+ K ++ +KA+
Sbjct: 298 YNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSE 357
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + PDV T+ LI GF K A LF M+++G P + + ++ G +
Sbjct: 358 MVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWL 417
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + M + G + V I++DG+C G++ A +L+ +G+ + +
Sbjct: 418 DSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNI 477
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC EG A E++ ++ + G P+ + ++GL R + ++ M +G
Sbjct: 478 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKG 537
Query: 396 ILPDSVTFNCLL 407
D+ T L+
Sbjct: 538 FPVDATTAELLI 549
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 151/304 (49%), Gaps = 1/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ IYN L++G K + +A +D M ++PD VT++ +I G+C+++ A L
Sbjct: 592 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 651
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG P+ +N L+ G E ++ +N+ EM++ G ++++ L+DG C
Sbjct: 652 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCK 710
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ +A +L + + ++P Y +++ C G A + E+ ++ + +
Sbjct: 711 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L+ G +L + E L EKM+ +G+ PD VT+ ++ C V+A +LR
Sbjct: 771 YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 830
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
KG+ G + +L++ + E L++EM + G P LA ++ + A K
Sbjct: 831 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMD 890
Query: 488 RQTR 491
TR
Sbjct: 891 EATR 894
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 7/315 (2%)
Query: 177 FEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
E R+L+DG P + YN +I+ K + ++A + + +KPD VTF
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
I G+ + K A F EM + G PN + LI G F E +++ + LG
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
TC + GL GRV +A ++ + +G++P F Y L+ C +G A
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E+ DE+ KG P++ L++GL + A L + M ++G+ PDSVT++ +++
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +A L +KG+ P Y+ LV G +E ++ NL EML +GF L
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 699
Query: 471 ATYNSYMDGLSNARK 485
++N+ +DG + K
Sbjct: 700 -SFNTLIDGYCKSCK 713
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+ T+ I+ +G CR K+ + A F EM++ G P+ + + LI GF E DE + +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ G + +T +L+ GLC G++ KA E++ G P + L+E C
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
E N G ALE++DE+ K+ +PS ++ +I GL + A+ L+EKM G+ P+ V
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
++ L+ GR +A RL S G+ PD Y+ ++S ++ + +E + E+
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
G PD T+ +++ G S K +
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAK 475
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 144/292 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y ++ G + + ++A ++ M + +KPD + LI GF R D L +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G N++++N LI G K ++ + MI LGC+ +S T +L++G C
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + +A EL+ + +R ++P Y ++ LC + +A ++++++ G P+V+
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI G + EA L++ M G+ PD +N ++ L G+ +A L
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+GL PD +T+ + GY++ + E +EMLD G +P+ Y ++G
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V +Y+ LI G+ ++A D M V PD+ +N +IS + K + A
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
E++ +G P+ V+F I G+ K E EM++ G ++ +L++G
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G +++A + GVLP + L G AL+V EL +KG +P V
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++LI G + + +A L ++M +GI P+ +N L++ LC G A +L
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KGL+PD +TY ++ GY + E +L +EM +G P YN+ + G
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 1/332 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C R F + + + + M L + M K + PS Y +ING C++
Sbjct: 308 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLS 366
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A ++M +KP+VV ++ LI G+ + + A L M G P++ +N +I
Sbjct: 367 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 426
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
K +E E+ G + +VT + G G++ +A + + G++
Sbjct: 427 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y L+ GN AL + L G LP V C+ I GL + + EA +
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ ++G++PD T++ L+ C G A L KG+ P+ Y+ LV G +
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + M ++G PD TY++ +DG
Sbjct: 607 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 1/276 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P +YN L++G K + +KA+ + M++ ++FN LI G+C++ K A
Sbjct: 661 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQ 719
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM K P+ V++ T+I K +E + EM E +VT L+ G
Sbjct: 720 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 779
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ + L +GV P + Y ++ C E N A ++ DE+ KG L
Sbjct: 780 KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGT 839
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI L + EAS L+++M + G+ P + L+ + G+ +A R+
Sbjct: 840 IHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGV 899
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ GL PD T LV+G + ++ NL+ +++
Sbjct: 900 KSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 123/248 (49%), Gaps = 2/248 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ V+ K M + F M L G + +N LI+G+ K + +A +
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREM--LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQE 723
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++ PD VT+ +I C+ K + A LF+EM+E+ + V++ +L+ G+ +
Sbjct: 724 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 783
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + +M+ G + VT +++ C E +++A +L + +G+L K +
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 843
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC + A +++DE+ + G PS+ AC+TL+ K EA+ + E + G
Sbjct: 844 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 903
Query: 396 ILPDSVTF 403
++PD+ T
Sbjct: 904 LVPDTTTL 911
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 36/276 (13%)
Query: 227 TFNILISGFCRNKKFDLALGLFREM------------------REKGCNPNVVSFNTLIR 268
+F+IL C ++ F LA G+ +M R G + VV F+ LI
Sbjct: 106 SFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV-FDILID 164
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ DE N+ F + IL+ L C + +G++P
Sbjct: 165 SYKRMGMLDEAANVF---------FVAKNDSILIS--------LIRCNSLRSMGEKGLVP 207
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ Y + LC A +E+ K G P AC+ LI+G R E +
Sbjct: 208 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 267
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+ M+ GI + +T+N L+ LC G+ A + T G P+ T+ +L+ GY RE
Sbjct: 268 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 327
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ L++EM +P +Y + ++GL + +
Sbjct: 328 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 363
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 152/326 (46%), Gaps = 9/326 (2%)
Query: 163 AFVKANRMNDGLLAFEAMRKLID------GR---PSVSIYNVLINGFVKCREFDKALGFY 213
A N + DGL+ + ++ + GR PSV YN LIN + KA +
Sbjct: 137 ALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVW 196
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D+MV R+ P+VVT+ +I C A GLF EM+E G PN+ ++N L+ F
Sbjct: 197 DQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKR 256
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ Y++++ G + V L+DGLC R+ +A + +D R V P Y
Sbjct: 257 DNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVY 316
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ G A AL E+ +K P C+ ++ GL + A+ +E M +
Sbjct: 317 NSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQ 376
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
GI ++ +N L+++ C G +A S G++P+ +TY L+ G+++ +
Sbjct: 377 SGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEI 436
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+ EM+ +G P++ TY + + G
Sbjct: 437 AMAIYTEMVAKGVEPNVVTYTALIHG 462
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ YN L++ K AL FY +++ + P+ V F LI G C+ + A
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKN 299
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M P V +N+LI G F E + E+I TC I+V GLC
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLC 359
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G++ A + + G+ Y L+++ C GN AL + + G P+V+
Sbjct: 360 DGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVV 419
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++LI+G + + A + +M+ +G+ P+ VT+ L+ G A L+
Sbjct: 420 TYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEM 479
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
KG+ + +T +LV G RENR ++ + E
Sbjct: 480 EEKGIYSNAITVSVLVDGLCRENRVQDAVRFIME 513
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 6/223 (2%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ + YNVLI+ + K D+AL RM V+P+VVT++ LI G +N + ++A+ ++
Sbjct: 382 NAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIY 441
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM KG PNVV++ LI G D + EM E G +++T +LVDGLC E
Sbjct: 442 TEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRE 501
Query: 309 GRVLKACELVIDFS------RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
RV A ++++S + + Y L+ L +G A + G +
Sbjct: 502 NRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMV 561
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
P T +I GL L + A L M+K G+ P C
Sbjct: 562 PDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCAMVC 604
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 42/331 (12%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF ++ KANR+ + F M + + P+V +YN LI+G + +AL F+
Sbjct: 280 IFTTLIDGLCKANRITEAKNIFLDMPRY-EVAPTVPVYNSLIHGAFRSGYAQEALAFFQE 338
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++R ++PD T +I++ G C + +A M++ G N ++N
Sbjct: 339 IIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYN----------- 387
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+L+D C G + +A S GV P Y
Sbjct: 388 ------------------------VLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSS 423
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G IA+ + E+ KG P+V+ T LI G + A L ++M ++G
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD------PDGMTYHILVSGYTREN 449
I +++T + L++ LC R DA R + S + + +TY L+ G +
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDG 543
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ E + + M D G +PD TY + GL
Sbjct: 544 QYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 3/265 (1%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+L+ + D AL +F +RE P + + N ++ G + EM
Sbjct: 108 ALGVLVIALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEM 164
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ G S VT L++ ++G V KA E+ R + P Y ++ LC E
Sbjct: 165 LGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCI 224
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
G A + E+ + G P++ L+ + A +LK G++P+ V F L
Sbjct: 225 GDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTL 284
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ LC R +A + L + P Y+ L+ G R +E E++ +
Sbjct: 285 IDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKEL 344
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
PD T + + GL + + TR
Sbjct: 345 RPDEFTCSIVVRGLCDGGQMQVATR 369
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 5/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F A R +DG M RK+ P+V ++VLI+ FVK + +A +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKI---NPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PD +T+ LI GFC+ D A + M KGC+PN+ +FN LI G+
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + +M G +VT L+ G C G++ A EL + R V P Y
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G + ALE+ +++ K + +I G+ K +A L + +
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P T+N ++ LC G +A+ L G PDG TY+IL+ + + +
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ E+ GF D +T +D LS+ R
Sbjct: 598 VKLIEELKRCGFSVDASTIKMVIDMLSDGR 627
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 149/303 (49%), Gaps = 3/303 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++ YN+LI GF +D M++ ++ P+VVTF++LI F + K A L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+EM +G P+ +++ +LI GF E D+ M M+ GC+ + T IL++G C
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
R+ EL S RGV+ Y L++ C G +A E+ E+ + P+++
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L++GL + +A + EK+ K + D +N ++ +C+ + DA L
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD---GLSNARK 485
KG+ P TY+I++ G ++ E E L +M ++G PD TYN + G +A K
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 486 SVR 488
SV+
Sbjct: 597 SVK 599
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 12/347 (3%)
Query: 142 CSNDGIFSCPEMERIFH-FAVNAFVKANRMNDGLL------AFEAMRKLIDGRP--SVSI 192
C N+ F C ER F F+ R+ GL+ A + R +I RP +V
Sbjct: 34 CPNELSFCC---ERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVID 90
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
++ L + K +++D L +M + ++ T +I+I+ FCR +K LA ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G PN ++F+TLI G E + E + + M+E+G + +T LV+GLC G+
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L+ G P Y ++ +C G +A+E++ ++ ++ + + +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + A L +M +GI + +T+N L+ C+ GR D +L + ++
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +L+ + +E + +E E L EM+ G PD TY S +DG
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 157/325 (48%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN + + + +L + M + +P+ Y ++N K + A+ +M
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K D V ++I+I G C++ D A LF EM KG N++++N LI GF ++D+G
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +MI+ + VT +L+D EG++ +A EL + RG+ P Y L++
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C E + A ++VD + KG P++ LI G + + + L KM G++ D+
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C++G+ A L ++ + P+ +TY IL+ G ++ + +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
+ D+ YN + G+ NA K
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASK 523
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 151/292 (51%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+++IN F +CR+ A ++++ +P+ +TF+ LI+G C + AL L M E
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P++++ NTL+ G K E + + +M+E GC+ ++VT +++ +C G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL+ R + Y +++ LC G+ A + +E+ KG ++I LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + + + L+ M+K I P+ VTF+ L++ G+ +A+ L +G+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D +TY L+ G+ +EN + +V+ M+ +G P++ T+N ++G A +
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 40/367 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYD 214
+N F + ++ LAF AM K+I P+ ++ LING +AL D
Sbjct: 126 LSIMINCFCRCRKL---CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF----------- 263
RMV KPD++T N L++G C + K A+ L +M E GC PN V++
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 264 ------------------------NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ +I G D N+ EM G + +T
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
IL+ G CN GR +L+ D +R + P + L++ EG A E+ E+ +
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P I T+LI+G + +A+ +++ M+ +G P+ TFN L+ C R D
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L S +G+ D +TY+ L+ G+ + + L EM+ P++ TY +DG
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 480 LSNARKS 486
L + +S
Sbjct: 483 LCDNGES 489
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%)
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
K D A+ LFR+M P V+ F+ L +++D + + +M G + T
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I+++ C ++ A + + G P + L+ LC EG ALE+VD + +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G+ P +I TL+ GL K EA L++KM++ G P++VT+ +L +C G+T A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L + + D + Y I++ G + NL NEM +G ++ TYN + G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 480 LSNA 483
NA
Sbjct: 308 FCNA 311
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R F+ +N + KANR++DGL F M L YN LI GF + + + A +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV +V P++VT+ IL+ G C N + + AL +F ++ + ++ +N +I G
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ ++ + G + T I++ GLC +G + +A L G P + Y
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG 360
L+ G+G+A ++++++EL + G
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCG 608
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 173/372 (46%), Gaps = 9/372 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFHFA--VN 162
++ ++ L + SE S++ + + S +F+ + I+ F+ +
Sbjct: 3 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGLIT 62
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + R+ P + VL +K + F GFY ++
Sbjct: 63 AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGFYKEILESGYP 121
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC+ + +A +F + + G P+VVS+NTL+ G+ DEG +
Sbjct: 122 ASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M G + T +L++GLC E ++ A EL + +G++P + L++ C
Sbjct: 182 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G +ALE+ ++ + LP +I TLI GL + +A L+++M +G+ PD +T
Sbjct: 242 NGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 301
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L++ C G A R + + D + Y L+SG +E R + E ++ EML
Sbjct: 302 YTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 361
Query: 463 DEGFIPDLATYN 474
G PD TY
Sbjct: 362 SVGLKPDARTYT 373
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 141/276 (51%), Gaps = 1/276 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K R+ A +D + + ++P VV++N L++G+ R D
Sbjct: 119 GYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM+ G + VT L+DG
Sbjct: 179 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG 238
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + +LP Y L+ LC +G+ A +++DE+ KG P
Sbjct: 239 HCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 298
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
I T LI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 299 KITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLR 358
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+ GL PD TY ++++ + ++ +G L+ E
Sbjct: 359 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 3/200 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D AL Y +
Sbjct: 197 YSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQ 254
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+ A L EM KG P+ +++ LI G E
Sbjct: 255 MLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGD 314
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EGR + A +++ + G+ P Y
Sbjct: 315 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 374
Query: 336 LVEKLCGEGNAGIALEVVDE 355
++ + C +G+ +++ E
Sbjct: 375 IINEFCKKGDVWKGSKLLKE 394
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C E + +A V D + K G PSV++ TL+ G RL E L M G
Sbjct: 130 LMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 189
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAL 249
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ +ML + +PDL TYN+ + GL
Sbjct: 250 EIYKQMLSQSLLPDLITYNTLIYGL 274
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 8/262 (3%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 51 RSDIYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 107
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLV 337
E++E G S IL+ C E R ++ + V D ++ G+ P Y L+
Sbjct: 108 VWGFYKEILESGYPASLYFFNILMHRFCKE-RDIRVAQSVFDAITKWGLRPSVVSYNTLM 166
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
G+ + + G P V + LI GL + K +A+ L ++ML +G++
Sbjct: 167 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 226
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L
Sbjct: 227 PNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL 286
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
++EM +G PD TY + +DG
Sbjct: 287 IDEMSMKGLKPDKITYTALIDG 308
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ G +++L+ G FN L+ C R + + A
Sbjct: 91 TCRKVLEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCK-ERDIRVAQSVFDA 149
Query: 427 STK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TK GL P ++Y+ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 150 ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 209
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 181/395 (45%), Gaps = 14/395 (3%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F F WA +RH F ++ L+ + V+ + G+ P
Sbjct: 110 FEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMI-------RRGVRRGP- 161
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALG 211
R F + ++ +A ++ + + M+ DG P +SI NV +N V DKALG
Sbjct: 162 --RQFAHLMLSYSRAGKLRSAMRVLQLMQ--TDGCAPDISICNVAVNVLVVAGRVDKALG 217
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
F DRM R V+PDVVT+N LI G C ++ AL + M + GC P+ +S+ T++
Sbjct: 218 FADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLC 277
Query: 272 GERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E++ E ++ M + G VT +L+ L G +A E + + + +
Sbjct: 278 KEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDE 337
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V C G A E+V E+ K P V+ + +++G R+ + +A +M+
Sbjct: 338 VGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKH 397
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K G P+ VT LL LC VG++ +A L + P +TY +++ G+ RE +
Sbjct: 398 MYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGK 457
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE ++V +ML +GF P N + L K
Sbjct: 458 LKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGK 492
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 167/371 (45%), Gaps = 12/371 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV-K 166
D T+ +++ L S R E ++ + N CP P+ +I ++ V +F+ K
Sbjct: 230 DVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCP---------PD--KISYYTVMSFLCK 278
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+++ MR YN+LI+ K D+AL F R + D V
Sbjct: 279 EKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEV 338
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
++ ++ FC N + A + EM K C+P+VV+++ ++ GF + D+ M M
Sbjct: 339 GYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHM 398
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+ GC+ + VT L++GLC G+ +A EL+ P D Y ++ EG
Sbjct: 399 YKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKL 458
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+ +VV ++ +KG P+ + LI L + K EA ME+ +G + V F +
Sbjct: 459 KESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTV 518
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ G A L PD +TY ++V+ R+ R KE LV +ML+ G
Sbjct: 519 IHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGL 578
Query: 467 IPDLATYNSYM 477
+P L TY + +
Sbjct: 579 VPTLVTYRTVI 589
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 164/418 (39%), Gaps = 25/418 (5%)
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+Q+T + L+H L H F S FR D + +V S + R
Sbjct: 300 TDQVTYNMLIHVLAKHGHADEALE------FLRESEGKRFRVDEVGYSAVVHSFCLNGRM 353
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID 185
+E ++ + + C P++ + V+ F + ++ + M K +
Sbjct: 354 AEAKEIVGEMISKECH---------PDVV-TYSAVVDGFCRIGEIDQARKMMKHMYK--N 401
Query: 186 G-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G +P++ + L+NG K + +A ++ D P +T+++++ GF R K +
Sbjct: 402 GCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKES 461
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ +M +KG P V N LI E K E + GC + V ++ G
Sbjct: 462 CDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHG 521
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+G + A L+ D P Y +V L +G A +V+++ +G +P+
Sbjct: 522 FSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPT 581
Query: 365 VIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
++ T+I R KG E L++KML L +N ++E LC G+ +A L
Sbjct: 582 LVTYRTVIH--RYCEKGTVEELVDLLDKMLARQELKS--VYNQVIEKLCAFGKLNEAYGL 637
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D T HIL+ + + N+ M IPDL D L
Sbjct: 638 LSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLKLCQKVDDRL 695
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 137/330 (41%), Gaps = 4/330 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMR---KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
V A ++A D AFE R + R + +++ ++ + R D A M+
Sbjct: 94 VRAVLRAQAQGDARAAFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMI 153
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
R V+ F L+ + R K A+ + + M+ GC P++ N + + D
Sbjct: 154 RRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVD 213
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + A M +G E VT L+ GLC+ RV++A E++ + G P Y+ ++
Sbjct: 214 KALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVM 273
Query: 338 EKLCGEGNAGIALEVVDELWK-KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
LC E ++ + G L + LI L + EA + + +
Sbjct: 274 SFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRF 333
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D V ++ ++ C GR +A + +K PD +TY +V G+ R +
Sbjct: 334 RVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARK 393
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ M G P++ T+ + ++GL KS
Sbjct: 394 MMKHMYKNGCKPNIVTHTALLNGLCKVGKS 423
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 5/149 (3%)
Query: 342 GEGNAGIALEV---VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+G+A A E D W+ + P V ++ L R R A ++ M++ G+
Sbjct: 102 AQGDARAAFEFFRWADRQWQYRHAPEVF--DEMLGLLSRTRLHDPARRVVRLMIRRGVRR 159
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
F L+ G+ A R+ L T G PD ++ V+ R +
Sbjct: 160 GPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFA 219
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ M G PD+ TYN + GL + R+ V
Sbjct: 220 DRMRRVGVEPDVVTYNCLIKGLCSVRRVV 248
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 158/335 (47%), Gaps = 2/335 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C ++ ++ F+ R+ D + FE + P V +NV+I G K +
Sbjct: 192 FGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQ 251
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTL 266
KAL +RM PD VT NIL++G CR K+ + R ++ G C PNVV++ ++
Sbjct: 252 KALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSV 311
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ + ++ + + +M+ +G + VT +L++G G + A + R
Sbjct: 312 ISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRC 371
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
LP + L++ C G A+++ E+ + P+ +I + + EA
Sbjct: 372 LPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALH 431
Query: 387 LMEKM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++KM ++ I P + +N +++ LC G+ +A+ + + KG PD TY IL+ G+
Sbjct: 432 FLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGH 491
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R E ++M++ G PD NS++ L
Sbjct: 492 CMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCL 526
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 11/304 (3%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + VN +A ++ G E +R+L DG P+V Y +I+G+ K
Sbjct: 263 FGCSPDTVTHNILVNGLCRAKEVSKGR---EVLRRLQRDGVCMPNVVTYTSVISGYCKAG 319
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ A+ Y+ MV P+VVT+N+LI+G+ + A+ ++++M + C P+VV+F+
Sbjct: 320 RMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFS 379
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS-R 323
+LI G+ + D+ + + EM + + ++ T I++ C + R +A + + R
Sbjct: 380 SLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMR 439
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A ++ E+ +KG P T LI G + E
Sbjct: 440 TDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAE 499
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL----ASTKGLDPDGMTYH 439
A KM++ G PDS+ N + L G + D + + AS+ DP +T
Sbjct: 500 AVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMRIAAGGASSSWKDPSPVTQS 559
Query: 440 ILVS 443
I +S
Sbjct: 560 IDIS 563
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 6/359 (1%)
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
S L+ SA P S + P + + ++ ++ R D L F+ M P+
Sbjct: 106 STLHLFSALHSPHSQ---LAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPN 162
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ L D A + + + +N L+ F + + A+ LF
Sbjct: 163 ARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFE 222
Query: 250 EMREKGC-NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+ G +P+V SFN +I+G + + + M E GC +VT ILV+GLC
Sbjct: 223 GWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRA 282
Query: 309 GRVLKACELVIDFSRRGV-LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V K E++ R GV +P Y ++ C G A+ V +++ G P+V+
Sbjct: 283 KEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVT 342
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G + A + ++M+ LPD VTF+ L++ C G+ DA ++ +
Sbjct: 343 YNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMA 402
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM-LDEGFIPDLATYNSYMDGLSNARK 485
+ P+ T+ I++ + ++NR E + + +M + P YN +D L K
Sbjct: 403 QYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGK 461
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 4/308 (1%)
Query: 176 AFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A E +R+ IDG R V +YN +I+G K + + A FY MV R+ P VVT+N LI
Sbjct: 193 ALEMLRR-IDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI 251
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C + A+GL +M + NP V +F+ L+ F E K E N+ M++ +
Sbjct: 252 CGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVK 311
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L++G C V KA + ++ GV P Y ++ C A+++
Sbjct: 312 PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL 371
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+E+ K P V+ +LI+GL + + A L+ +M G P+ +T+N LL+ LC
Sbjct: 372 FEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCK 431
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A L + P TY+IL++G + R K+ + + ++L G+ D+ T
Sbjct: 432 NHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYT 491
Query: 473 YNSYMDGL 480
YN+ + G
Sbjct: 492 YNTMIKGF 499
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K + AL R+ V+ DVV +N +I G C++K + A + EM
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMV 236
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
K P VV++NTLI G + + + + ++MI + T ILVD C EG+V
Sbjct: 237 AKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVK 296
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + + ++ V P Y L+ C A + + + + G P V + + +I
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +++ EA L E+M + I PD VT+N L++ LC GR A +L +G
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP 416
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ +TY+ L+ + + + L+ ++ D P + TYN ++GL
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 146/295 (49%), Gaps = 5/295 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFY 213
+++ ++ K +ND AF+ +++ R P+V YN LI G + A+G
Sbjct: 211 MYNTIIDGVCKDKLVND---AFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLL 267
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M+ + + P V TF+IL+ FC+ K A +F M +K PN+V++N+L+ G+
Sbjct: 268 HKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLV 327
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ ++ ++ M ++G + I++ G C V +A +L + + + P Y
Sbjct: 328 NEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTY 387
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G AL+++ E+ +G P++I +L++ L + +A L+ K+
Sbjct: 388 NSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD 447
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
I P T+N L+ LC GR DA ++ G + D TY+ ++ G+ ++
Sbjct: 448 HNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 148/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ + ++ VK + + + +M + + ++VT +ILI+ F + L+ +
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F + +KG P+ ++ TLI+G + + ++ +++ LG + + V+ L++GLC
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ A E++ + V Y +++ +C + A + E+ K P+V+
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI GL + + +A GL+ KM+ E I P TF+ L++ C G+ +A + ++
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
K + P+ +TY+ L++GY N + E++ N M G PD+ +Y+ + G +
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIK 363
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 121/261 (46%), Gaps = 36/261 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F V+AF K ++ + F M K D +P++ YN L+NG+ E +KA ++ M
Sbjct: 282 FSILVDAFCKEGKVKEAKNVFVVMMKK-DVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PDV +++I+ISGFC+ K D A+ LF EM K P+VV++N+LI
Sbjct: 341 AQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLI--------- 391
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DGLC GR+ A +L+ + RG P Y L
Sbjct: 392 --------------------------DGLCKSGRISYALKLIGEMHDRGQPPNIITYNSL 425
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC + A+E++ +L PSV LI GL + + +A + E +L G
Sbjct: 426 LDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485
Query: 397 LPDSVTFNCLLEDLCDVGRTV 417
D T+N +++ C G +
Sbjct: 486 NIDVYTYNTMIKGFCKKGFVI 506
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 159/331 (48%), Gaps = 6/331 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + ++ K+ ++ + FEA+R+ + S + +++LING VK +A
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAVRRSMP--VSAATFSILINGLVKAGMMIQAHSLAQ 248
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ D+ T+ +++ +NKK A+ L ++ GC P + ++N L+ G
Sbjct: 249 ETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMG 308
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E +++ ++++ GC VT L+DGL E R +A +L + + RG+ Y
Sbjct: 309 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYT 368
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L G A V + G +P V+ +T+I+GL + + A + + M
Sbjct: 369 ALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL--DPDGMTYHILVSGYTRENRRK 452
G+ P+ V ++ L+ LC R +D L +LA K PD +TY+IL+ G + +
Sbjct: 429 GLAPNEVVYSALIHGLCK-ARKMDC-ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+EML+ G PD+ TYN + GL A
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKA 517
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 18/357 (5%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + + HS+ + N C + VN K +
Sbjct: 225 ATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDI----------HTYTAIVNWLAKNKK 274
Query: 170 MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ + + E + +G P+++ YN L+NG K ++A+ ++V + PDVVT+
Sbjct: 275 IQEAVALMEKITA--NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
LI G + K+ A LF+EM +G + V + LIRG K + ++ M
Sbjct: 333 TSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTS 392
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC VT ++DGL GR+ A + RG+ P + Y L+ LC
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
ALE++ ++ K P I LI+GL + A ++ML+ G PD T+N L+
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 512
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LC G T A + Y LV G + + + G L +EM G
Sbjct: 513 GLCKAGNTDAA-----CGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSG 564
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 180/432 (41%), Gaps = 58/432 (13%)
Query: 94 HIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
H A +T + D T+ IV LA + + E +++ I+AN C P +
Sbjct: 244 HSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT---------PTI 294
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVK-CREFD--- 207
++ +N K R+ + A + +RK++D P V Y LI+G K R F+
Sbjct: 295 A-TYNALLNGLCKMGRLEE---AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350
Query: 208 -------------------------------KALGFYDRMVRDRVKPDVVTFNILISGFC 236
+A Y M PDVVT + +I G
Sbjct: 351 LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + A+ +F+ M +G PN V ++ LI G RK D + M +M + C ++
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T IL+DGLC G V A + G P + Y L+ LC GN A V+D++
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
S ++L++GL + K L +M + G+ +S T L+ LC R
Sbjct: 531 -----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRV 584
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A L +G+ P Y+ ++S + + EG+ + EM + PD TYN+
Sbjct: 585 DEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNAL 642
Query: 477 MDGLSNARKSVR 488
++G+ A + R
Sbjct: 643 LNGMIGANRMDR 654
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 2/300 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLAL 245
RP V +NVLI G+ RE ++A M D V P + T N+++ G C++ K A+
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
F +R + + +F+ LI G + ++A E GC T +V+ L
Sbjct: 211 DHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
++ +A L+ + G P Y L+ LC G A++++ ++ G P V
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ T+LI+GL + ++ EA L ++M G+ D+V + L+ L G+ A +
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ G PD +T ++ G ++ R + M G P+ Y++ + GL ARK
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 2/330 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P++E ++ + + A + M + PS+ +N++++G K + A+
Sbjct: 152 PDVE-TWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
++ VR + TF+ILI+G + A L +E GC ++ ++ ++
Sbjct: 211 DHFE-AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+K E V + ++ GC + T L++GLC GR+ +A +L+ G P
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ L E + A ++ E+ +G + T LI GL + K +AS + +
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M G +PD VT + +++ L GR A R+ +GL P+ + Y L+ G + +
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ +M PD TYN +DGL
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNILIDGL 479
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 170 MNDGLLAFEAMRKLIDGR----PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+ D LA+E + L R SV N L++ F + + +A + +PDV
Sbjct: 95 LKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDV 154
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
T+N+LI+G+C ++ + A + REM E G P++ + N ++ G K ++ +
Sbjct: 155 ETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDH-F 213
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E + S+ T IL++GL G +++A L + + G Y +V L
Sbjct: 214 EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK 273
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A+ +++++ G P++ L+ GL ++ + EA L+ K++ G PD VT+
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 333
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ L R+ +A +L +++GL D + Y L+ G + + + ++ M
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393
Query: 465 GFIPDLATYNSYMDGLSNA 483
G +PD+ T ++ +DGLS A
Sbjct: 394 GCVPDVVTLSTMIDGLSKA 412
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 48/315 (15%)
Query: 176 AFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV--KPDVVTFNILIS 233
A + +R+ I V I+ L ++ D A + + R + V T N L+
Sbjct: 75 ALDRLRREISTDAVVKIFQCL-------KDADLAWELFQCLSSPRFGFQHSVHTGNALLD 127
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE-LGCE 292
F R K+ A L + P+V ++N LI G+ R+ +E + EM E G
Sbjct: 128 VFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVA 187
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S T +++ GLC G+VL A D+F V +
Sbjct: 188 PSLKTHNLVLHGLCKSGKVLAA----------------MDHFEAVRR------------- 218
Query: 353 VDELWKKGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++P S + LI GL + ++A L ++ G D T+ ++ L
Sbjct: 219 --------SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLA 270
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
+ +A L + G P TY+ L++G + R +E +L+ +++D G PD+
Sbjct: 271 KNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 330
Query: 472 TYNSYMDGLSNARKS 486
TY S +DGL ++S
Sbjct: 331 TYTSLIDGLGKEKRS 345
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IFH KANR+++ + F A+RK +G P YN +I+ +K + ++ Y
Sbjct: 575 IFHL-----CKANRVDEAVSLFNAIRK--EGMPHPYAYNSIISALIKSGKVNEGQAVYQE 627
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
M R KPD VT+N L++G + D A + EM +G P V + L
Sbjct: 628 MTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 150/306 (49%), Gaps = 11/306 (3%)
Query: 181 RKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
R + DG R ++ YN LING K + A Y +M+ + ++P TF LISG+C++
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ + A L+REM EK P+V +F LI G + E + EM+E + + VT
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++++G C + KA EL+ D G++P + Y L+ LC G A + +D+L KK
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ + + L+ G + EA +M++ GI D V L++ G
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLID-----GAMKQQ 652
Query: 420 DRLRLLASTK-----GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
D RL K GL PD + Y ++ Y++E K+ ++ M+ E P++ TY
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712
Query: 475 SYMDGL 480
++M+GL
Sbjct: 713 AFMNGL 718
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 6/321 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F + N M + F+ M RK+ +P+ YNV+I G+ K DKA +
Sbjct: 501 FTALIYGLCSTNEMAEASKLFDEMVERKI---KPTEVTYNVMIEGYCKAHNMDKAFELLE 557
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + + PD T+ LISG C + A ++ +K N + ++ L+ G+ G+
Sbjct: 558 DMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQG 617
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E ++ + EMI+ G V +L+DG + + + L+ +G+ P Y
Sbjct: 618 RLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYT 677
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ EG+ + E +D + + P+V+ T + GL ++ + A L EKML
Sbjct: 678 SMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTA 737
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I P+SVT+ C L+ L G +A L KGL + TY+IL+ G+ + R E
Sbjct: 738 NISPNSVTYGCFLDSLTKEGNMKEATDLH-HEMLKGLLANTATYNILIRGFCKLGRLIEA 796
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+++EM + G PD TY++
Sbjct: 797 TKVLSEMTENGIFPDCITYST 817
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 36/339 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + + LI+G+ K + +KA Y M + P V TF LI G C + A L
Sbjct: 461 PTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKL 520
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+ P V++N +I G+ D+ + +M+ G + T L+ GLC+
Sbjct: 521 FDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCS 580
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV A + + D ++ + + Y L+ CG+G AL E+ ++G ++
Sbjct: 581 TGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVC 640
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS--------------------------- 400
LI+G + + GL++KM +G+ PDS
Sbjct: 641 HAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMV 700
Query: 401 --------VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
VT+ + LC VG A L T + P+ +TY + T+E K
Sbjct: 701 TEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMK 760
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
E +L +EML +G + + ATYN + G + + T+
Sbjct: 761 EATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATK 798
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 171/376 (45%), Gaps = 48/376 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F F V+++++ R+ D ++ M L+ P V + ++NG ++ R+F +D
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLL---PEVRTLSAILNGLLRIRKFILVWEVFD 207
Query: 215 RMVRDRVKPD-----------------------------------VVTFNILISGFCRNK 239
V VKPD +VT+N+LI G C+
Sbjct: 208 ESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGG 267
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
AL + + +REKG +VV++ TL+ GF ++FD+G+ + EM+ELG +
Sbjct: 268 GVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVS 327
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK- 358
LVDGL +G + A +LV+ R G LP F Y L+ LC G L+ + L+K
Sbjct: 328 GLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC----KGEDLDKAELLYKN 383
Query: 359 --KGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
NLP + + + LI+ + A +M+++GI +N L+ C G
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A+ L +GL+P T+ L+SGY ++ + ++ L EM ++ P + T+ +
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503
Query: 476 YMDGLSNARKSVRQTR 491
+ GL + + ++
Sbjct: 504 LIYGLCSTNEMAEASK 519
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 145/338 (42%), Gaps = 38/338 (11%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ YNVLI+G K +AL + +K DVVT+ L+ GFCR ++FD + L
Sbjct: 252 SIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLM 311
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM E G P + + L+ G + D ++ ++ G + L++ LC +
Sbjct: 312 NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC-K 370
Query: 309 GRVLKACEL-------------------VID-FSRRGVLPKDFDYFG------------- 335
G L EL +ID F +RG+L YFG
Sbjct: 371 GEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP 430
Query: 336 ---LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L+ C G+ A + ++ +G P+ TTLI G + + +A L +M
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
++ I P TF L+ LC +A +L + + P +TY++++ GY + +
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL-SNARKSVRQ 489
+ L+ +ML G +PD TY + GL S R S +
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK 588
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 10/296 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+ L++G+ +AL M++ + D+V +LI G + + GL ++M
Sbjct: 606 YSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMY 665
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ V + ++I + E F + M+ C + VT ++GLC G +
Sbjct: 666 DQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEID 725
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + P Y ++ L EGN A ++ E+ K G L + LI
Sbjct: 726 RAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILI 784
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + +EA+ ++ +M + GI PD +T++ ++ + C G A L KG++
Sbjct: 785 RGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVE 844
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP---------DLATYNSYMDG 479
PD + +++L+ G + L N+ML G P DL N M G
Sbjct: 845 PDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHG 900
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 35/292 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LIN K + DKA Y M + + VT++ILI FC+ D+A
Sbjct: 356 PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESY 415
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M E G + +N+LI G + +MI G E ++ T L+ G C
Sbjct: 416 FGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK 475
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +V KA +L + + + + P SV
Sbjct: 476 DLQVEKAFKLYREMNEKEIAP-----------------------------------SVYT 500
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI GL + EAS L ++M++ I P VT+N ++E C A L
Sbjct: 501 FTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDML 560
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD TY L+SG R ++ ++++ + + Y++ + G
Sbjct: 561 HNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHG 612
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 121/302 (40%), Gaps = 31/302 (10%)
Query: 188 PSVS-------IYNVLINGFVKCREFDKALGFYDRM-VRDRVKPDVVTFNILISGFCRNK 239
PS+S + VLIN + AL F++ + + + +F IL+ +NK
Sbjct: 54 PSISSTLKPHHVEQVLINTL---HDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNK 110
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS-VTC 298
F A L + +G +P V F K C+FSS +
Sbjct: 111 LFWPANSLLHTLLLRGSDPKFV-----FEKFLESHK--------------QCKFSSTLGF 151
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+ LV RV A ++ +LP+ ++ L + EV DE
Sbjct: 152 DFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVN 211
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P C+ +I L L+ A + M VT+N L+ LC G ++
Sbjct: 212 AGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLE 271
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A +R KGL D +TY LV G+ R + +G L+NEM++ GF+P A + +D
Sbjct: 272 ALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVD 331
Query: 479 GL 480
GL
Sbjct: 332 GL 333
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+++ K M + L E ++ L+ + + YN+LI GF K +A M +
Sbjct: 750 LDSLTKEGNMKEATDLHHEMLKGLL---ANTATYNILIRGFCKLGRLIEATKVLSEMTEN 806
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD +T++ +I CR+ A+ L+ M KG P+ V+FN LI G D+
Sbjct: 807 GIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKA 866
Query: 280 VNMAYEMIELGCEFSSV---------TCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ +M+ G + + C L+ G C G V A L R V
Sbjct: 867 FELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAV 922
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 9/379 (2%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIF 157
+FRH T+ ++ L + E S++ + + S +F+ + I+
Sbjct: 8 TFRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIY 67
Query: 158 HFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ + A++++ ++D + F +K P + VL +K + F FY
Sbjct: 68 VFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVL-EHLMKLKYFKLVWDFYKE 126
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + FNI++ FC+ + A +F + + G P+VVSFNTL+ G+
Sbjct: 127 ILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 186
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DEG + M G + T +L++GLC E +V +A EL + RG++P +
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTT 246
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G A+E+ ++ +G P +I TLI GL + + L+++M G
Sbjct: 247 LIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNG 306
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ L++ C G A R + + D + Y LVSG +E R + E
Sbjct: 307 LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAE 366
Query: 456 NLVNEMLDEGFIPDLATYN 474
+ EML G PD TY
Sbjct: 367 KMFREMLSVGLKPDNGTYT 385
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 150/300 (50%), Gaps = 2/300 (0%)
Query: 175 LAFEAMRKLID-GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L ++ +++++ G P S+ +N++++ F K E +A +D + + ++P VV+FN L+
Sbjct: 119 LVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G+ R D L M G P+V +++ LI G E K DE + EM++ G
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLV 238
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT L+D C G V A E+ +G P Y L+ LC +G+ +
Sbjct: 239 PNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRAL 298
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+DE+ G P I TTLI+G + A ++M+KE I D+V + L+ LC
Sbjct: 299 IDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQ 358
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR DA+++ + GL PD TY ++++ + ++ + L+ EM +G +P + T
Sbjct: 359 EGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N K +++++ F M R L+ P+ + LI+ K D A+ Y
Sbjct: 209 YSVLINGLCKESKVDEANELFNEMLDRGLV---PNGVTFTTLIDVHCKNGMVDSAMEIYK 265
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ PD++T+N LI G C+ L EM G P+ +++ TLI G E
Sbjct: 266 QMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEG 325
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ MI+ +V LV GLC EGR A ++ + G+ P + Y
Sbjct: 326 DLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYT 385
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ + C +G+ A ++ E+ + G++P V+
Sbjct: 386 MIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFGLV-EKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV DF + + P +F +V + C EG A V D + K G PSV++
Sbjct: 114 LKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G RL E L M G+ PD T++ L+ LC + +A+ L
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+GL P+G+T+ L+ + + + +ML +GF PDL TYN+ + GL + +
Sbjct: 234 DRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCK-KGDL 292
Query: 488 RQTR 491
+Q R
Sbjct: 293 KQVR 296
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E++E G S I++ C EG + +A + ++ G+ P + L+ G
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ + + G P V + LI GL + K EA+ L +ML G++P+ VTF
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFT 245
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G A + ++G PD +TY+ L+ G ++ K+ L++EM
Sbjct: 246 TLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305
Query: 465 GFIPDLATYNSYMDG 479
G PD TY + +DG
Sbjct: 306 GLKPDKITYTTLIDG 320
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +L+ +++L+ G FN ++ C G A +
Sbjct: 103 TCRKVLEHLMKLKYFKLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAI 162
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++++ L++GY R EG L + M G PD+ TY+ ++GL K
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 37/364 (10%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ A K + G + M K + +P++ YN I G + D+AL M+
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEMEK--ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK 305
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD T+ +L+ GFC+ K+ A +F M G NPN ++ LI GF E +E
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA------------------------- 314
+ + EMI G + + VT ++ G+ G + KA
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425
Query: 315 ----------CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
CEL+ + R + P F Y L+ LC + A EV+D++ + G P+
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V TLI+ + + A L++ M+ G+LPD +NCL+ LC + +A L +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV 545
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ TY ++ Y++ + E +ML G +P+ Y + G +
Sbjct: 546 DMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVG 605
Query: 485 KSVR 488
+V
Sbjct: 606 NTVE 609
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 3/325 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + KA M + F M L+ G P YN+LI+G++K + KA
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEM--LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M ++ P T+++LISG C + A + +M G PNV + TLI+ + E +
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + MI G L+ GLC +V +A L++D +G+ P Y
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ G +A ++ G +P+ + T LI+G + VEA + ML++G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++PD ++ ++ L G+T +A + L G+ PD Y+ L+SG+ +E ++
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L +EML G P++ YN+ ++GL
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGL 706
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 3/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ V+ F K R + L FE+M G P+ Y LI+GF+K ++AL D
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPS--SGLNPNRFTYTALIDGFIKEGNIEEALRIKDE 371
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +K +VVT+N +I G + + A+ LF EM G P+ ++N LI G+
Sbjct: 372 MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHD 431
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + EM S T +L+ GLC+ + KA E++ R GV P F Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ E +A+E++ + G LP + LI GL R +K EA L+ M ++G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P++ T+ + G A+R + G+ P+ + Y IL+ G+ E
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ ML++G IPD+ Y++ + LS K+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 161/325 (49%), Gaps = 5/325 (1%)
Query: 157 FHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ ++K++ M LLA RKL PS Y+VLI+G + KA D
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKL---TPSPFTYSVLISGLCHSSDLQKANEVLD 475
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+R+ VKP+V + LI + + ++++A+ L + M G P++ +N LI G +
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K +E + +M E G + ++ T ++ G + A D G++P + Y
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C GN AL + +KG +P + A + +I L + K EA G+ K LK
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++PD +N L+ C G A +L G++P+ + Y+ L++G + +
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
L +E+ ++ +PD+ TY++ +DG
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDG 740
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 136/293 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V +Y LI +V+ ++ A+ M+ + V PD+ +N LI G CR KK + A
Sbjct: 483 KPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M EKG PN ++ I + + +M+ G ++V IL+ G C
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G ++A +G++P Y ++ L G A+ V + K G +P V
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI G + +AS L ++ML GI P+ V +N L+ LC +G A L
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K L PD +TY ++ GY + E L +EM+ +G PD Y +DG
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 134/279 (48%), Gaps = 1/279 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V +YN LI+GF K + +KA YD M+ + + P++V +N LI+G C+ + A L
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F E+ EK P+VV+++T+I G+ E + EMI G IL+DG
Sbjct: 719 FDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 778
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + KA L + ++ V + L++ C G A E+ D++ K P+++
Sbjct: 779 EGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 837
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ + EA L M I+P+++T+ LL +G L
Sbjct: 838 YTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME 897
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+G+ D + Y ++ S Y +E + E L+N+ L EG
Sbjct: 898 ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 135/335 (40%), Gaps = 37/335 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +YN LING K E KA +D + + PDVVT++ +I G+C++ A L
Sbjct: 694 PNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKL 753
Query: 248 FREMREKGCNPN----------------------------------VVSFNTLIRGFFGE 273
F EM KG +P+ + +FN+LI F
Sbjct: 754 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKH 813
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K E + +M++ + VT IL+D + +A +L +D R ++P Y
Sbjct: 814 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 873
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ GN + + ++ +G IA + + K +EA L+ K L
Sbjct: 874 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
EGI + F+ L+ LC + L + L T + L+ G+ + E
Sbjct: 934 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 993
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
++ M G++P T S D +S R ++
Sbjct: 994 ASKVLGVMQRLGWVP---TSLSLTDSISTGRDDMK 1025
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 116/296 (39%), Gaps = 36/296 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ N L+ +K Y MV ++ PDV T+ +I C+ +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM EK C PN+ ++N I G DE + + M+E G T +LVDG C
Sbjct: 265 LSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ R +A + G+ P F Y L++ EGN AL + DE
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDE------------ 371
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
M+ G+ + VT+N ++ + G A L
Sbjct: 372 -----------------------MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL+PD TY++L+ GY + + + L+ EM P TY+ + GL ++
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHS 464
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 1/265 (0%)
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
R R+ ++ F+I I F + A +F +G P ++ N L+R
Sbjct: 162 RCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKAN 221
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ M+E T ++ C G V+K ++V+ + P F Y
Sbjct: 222 MMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPNLFTYN 280
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+ LC G ALEV + +KG P T L++G + ++ EA + E M
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ T+ L++ G +A R++ T+GL + +TY+ ++ G + +
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
+L NEML G PD TYN +DG
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDG 425
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEK----MLKEGILPDSVTFNCLLEDLCDVG 414
+G P++I C L+ L + GL K M++ I+PD T+ +++ C VG
Sbjct: 201 EGFFPTLICCNNLMRDLLK----ANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVG 256
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ ++ L K P+ TY+ + G + E + M+++G PD TY
Sbjct: 257 DVIKG-KMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYT 315
Query: 475 SYMDGLSNARKS 486
+DG ++S
Sbjct: 316 LLVDGFCKQKRS 327
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 148/309 (47%), Gaps = 4/309 (1%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
E MR +D V Y VLING K + A+ + +M KP+VV ++ ++ G C
Sbjct: 173 MEKMRYPLD----VYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLC 228
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
++ AL L EM KG PN+V++ LI+G ++ E ++ EMI++G
Sbjct: 229 KDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQ 288
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T ILVD C EG+V++A ++ G P F Y L+ C + A+ V +
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+G LP ++ T+LI G + + + L+E+M K G +PD VT+ L+ C GR
Sbjct: 349 VSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRP 408
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+ A L L G P+ T +++ G + N E +L M ++ Y+
Sbjct: 409 LAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSIL 468
Query: 477 MDGLSNARK 485
+DG+ +A K
Sbjct: 469 LDGMCSAGK 477
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ Y LI G + + D M++ ++ D+ T NIL+ FC+ K A
Sbjct: 249 RPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKS 308
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M G P+V ++N+LI + + K +E + + + M+ GC V L+ G C
Sbjct: 309 VIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWC 368
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ + K L+ + ++ G +P + L+ C G A E+ + K G +P++
Sbjct: 369 KDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQ 428
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C +++GL + EA L E M K + + V ++ LL+ +C G+ A L
Sbjct: 429 TCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL + TY I++ G ++ + E+L+ M + G +PD TYN ++ GL ++
Sbjct: 489 PGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEI 548
Query: 487 VRQTR 491
R +
Sbjct: 549 ARSIK 553
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 2/315 (0%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPD 224
K +++ L F+ M + PSV + +L+ V+ + + A+ + ++ D
Sbjct: 53 KVKNIDEALDLFQGMASM-KPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEAD 111
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+T NI+I+ CR K + M + G P V++ LI G + + V +
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVD 171
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M ++ T +L++GLC G L A E + R P Y +++ LC +G
Sbjct: 172 HMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDG 231
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + E+ KG P+++ LI+GL + E L+++M+K G+ D T N
Sbjct: 232 LVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLN 291
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G+ + A + G PD TY+ L+ Y +N+ E + + M+
Sbjct: 292 ILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR 351
Query: 465 GFIPDLATYNSYMDG 479
G +PD+ + S + G
Sbjct: 352 GCLPDIVVFTSLIHG 366
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + N+L++ F K + +A M+ PDV T+N LI +C K + A+
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMR 343
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M +GC P++V F +LI G+ ++ ++ +++ EM ++G VT L+ G C
Sbjct: 344 VFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFC 403
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP-SV 365
GR L A EL ++ + G +P +++ LC +GN + E +K NL ++
Sbjct: 404 QAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLC-KGNLLSEAVSLAEAMEKSNLDLNI 462
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ + L++G+ K A L + +G+ + T+ +++ LC G A+ L +
Sbjct: 463 VIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLIN 522
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G PD TY++ V G + + M D+GF D AT ++ LS
Sbjct: 523 MEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEG 582
Query: 486 SVR 488
R
Sbjct: 583 DTR 585
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + N+MN+ + F M P + ++ LI+G+ K + +K + + M
Sbjct: 325 YNSLIHIYCLQNKMNEAMRVFHLMVSR-GCLPDIVVFTSLIHGWCKDKNINKVMHLLEEM 383
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PDVVT+ LI GFC+ + A LF M + G PN+ + ++ G
Sbjct: 384 AKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLL 443
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V++A M + + + V IL+DG+C+ G++ A EL +G+ + Y +
Sbjct: 444 SEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIM 503
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC +G+ A +++ + + G LP ++GL ++ + + M +G
Sbjct: 504 IKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGF 563
Query: 397 LPDSVT 402
D+ T
Sbjct: 564 SVDAAT 569
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 4/265 (1%)
Query: 228 FNILISGFCRN---KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
F I + C++ K D AL LF+ M P+V F L+ + + +++
Sbjct: 41 FLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVK 100
Query: 285 EMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+ LG E ++T I+++ LC V ++ + G+ P L+ LC +
Sbjct: 101 HIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQ 160
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
GN A+ +VD + K V LI GL + + A + KM + P+ V +
Sbjct: 161 GNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVY 220
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
+ +++ LC G +A L S KG+ P+ +TY L+ G R KE +L++EM+
Sbjct: 221 STIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK 280
Query: 464 EGFIPDLATYNSYMDGLSNARKSVR 488
G DL T N +D K ++
Sbjct: 281 MGMRLDLQTLNILVDAFCKEGKVMQ 305
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K N +++ + EAM K + ++ IY++L++G + + A + +
Sbjct: 434 LDGLCKGNLLSEAVSLAEAMEK-SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++ +V T+ I+I G C+ D A L M E GC P+ ++N ++G +++ +
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSI 552
Query: 281 NMAYEMIELGCEFSSVTCEILVDGL-CNEG 309
M + G + T EI ++ L NEG
Sbjct: 553 KYLTIMRDKGFSVDAATTEITINYLSTNEG 582
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 153/312 (49%), Gaps = 1/312 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F + + PS+ + L+ K + + L +M V P+V T
Sbjct: 24 NTLDDALSSFNRLLHM-HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 82
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC + A + ++ + G P+ +F TLIRG E K E +++ +MI
Sbjct: 83 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G + + VT L++GLC G A L+ + P Y +++ LC +
Sbjct: 143 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 202
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + ++ +G P + T+L+ L L + + L+ +M+ ILPD V F+ ++
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ +A + + +G++PD +TY L+ G+ ++ E + + M+ +GF
Sbjct: 263 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 322
Query: 468 PDLATYNSYMDG 479
PD+ +Y + ++
Sbjct: 323 PDVISYTTLINA 334
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 160/350 (45%), Gaps = 26/350 (7%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F NR+ AF + K++ +P + + LI G +
Sbjct: 74 FGVPPNVYTLNILINSFCHLNRVG---FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 130
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+M+ + +P+VVT+ LI+G C+ A+ L R M + C P+VV + +
Sbjct: 131 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 190
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I +R+ E N+ +M+ G T LV LCN L+
Sbjct: 191 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 250
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+LP + +V+ LC EG A E+VD + ++G P V+ TTL++G + EA
Sbjct: 251 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 310
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL---DPDGMTYHILV 442
+ + M+++G PD +++ L+ + G+ D L L GL PD V
Sbjct: 311 KVFDMMVRKGFAPDVISYTTLI----NAGKK-DGGGLVSLQEVIGLVKETPDA------V 359
Query: 443 SGYTRENRRKE-------GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G E RK+ G L+NEM++ +P++ +++ +D L K
Sbjct: 360 KGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGK 409
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 7/265 (2%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +R + G +P V IY +I+ K R+ +A + +MV + PD+ T+ L+
Sbjct: 169 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 228
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C ++ L +M P+VV F+T++ E K E + MI+ G E
Sbjct: 229 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 288
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT L+DG C + + +A ++ R+G P Y L+ +G ++L+ V
Sbjct: 289 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEV 348
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASG--LMEKMLKEGILPDSVTFNCLLEDLC 411
L K+ P + +E +R+ + + G L+ +M+ I+P+ V F+ +++ LC
Sbjct: 349 IGLVKET--PDAVKGGA-VEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALC 405
Query: 412 DVGRTVDADRLRLLASTKGLDPDGM 436
G+ ++A + + +G++P+ +
Sbjct: 406 KEGKVMEAHDVVDMMIKRGVEPNAV 430
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 35/280 (12%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
D AL ++R++ P +V F L++ + K + L L +M G PNV + N
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN- 84
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
IL++ C+ RV A ++ + G
Sbjct: 85 ----------------------------------ILINSFCHLNRVGFAFSVLAKILKLG 110
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P + L+ LC EG G AL + D++ +G P+V+ TLI GL ++ A
Sbjct: 111 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 170
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L+ M + PD V + +++ LC + +A L +G+ PD TY LV
Sbjct: 171 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 230
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K L+N+M++ +PD+ +++ +D L K
Sbjct: 231 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 270
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 37/189 (19%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V I++ +++ K + +A D M++ V+PDVVT+ L+ G C + D A+ +
Sbjct: 253 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 312
Query: 248 FREMREKGCNPNVVSFNTLIR----------------GFFGE------------------ 273
F M KG P+V+S+ TLI G E
Sbjct: 313 FDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKM 372
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP---KD 330
+ F++G + EM+ + V +VD LC EG+V++A ++V +RGV P K
Sbjct: 373 KLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKV 432
Query: 331 FDYFGLVEK 339
FD VEK
Sbjct: 433 FDTMKCVEK 441
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + + + K R +I +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYR-LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y+ + + FNIL+ FC+ + LA +F + + G P+VVSFNTL+ G+
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A EL + G++P
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ + LP +I TLI GL + + L+++M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSV 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G P++ TY
Sbjct: 364 DAEKMLREMLSVGLKPEIGTYT 385
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 145/316 (45%), Gaps = 36/316 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F K + F+++ K RPSV +N L+NG++K + D+ M
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITKW-GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVM 197
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDV T ++LI+G C+ K D A LF EM + G PN V+F TLI
Sbjct: 198 QASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLI--------- 248
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DG C GRV A E+ + +LP Y L
Sbjct: 249 --------------------------DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTL 282
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G+ +++DE+ KG P I TTLI+G + A ++M+KE I
Sbjct: 283 IYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D + L+ LC GR+VDA+++ + GL P+ TY ++++ + ++ G
Sbjct: 343 RLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 457 LVNEMLDEGFIPDLAT 472
L+ EM G+ P+ T
Sbjct: 403 LLKEMQRXGYXPNXVT 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 113/258 (43%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + +I + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P V + LI GL + K +A+ L ++ML G++P+ V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 303 SMKGLKPDKITYTTLIDG 320
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 8/188 (4%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEV 352
TC +++ L LK +LV F + P +F L+ C EG +A V
Sbjct: 103 TCRKVIEHLMK----LKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSV 158
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
D + K G PSV++ TL+ G ++ E L M G+ PD T + L+ LC
Sbjct: 159 FDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCK 218
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ DA+ L GL P+G+T+ L+ G+ + R + +ML + +PDL T
Sbjct: 219 ESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLIT 278
Query: 473 YNSYMDGL 480
YN+ + GL
Sbjct: 279 YNTLIYGL 286
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 155/318 (48%), Gaps = 1/318 (0%)
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++D L +F + + PS+ + L+ K + + L +M V P+V T
Sbjct: 35 NTLDDALSSFNRLLHM-HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 93
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
NILI+ FC + A + ++ + G P+ +F TLIRG E K E +++ +MI
Sbjct: 94 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G + + VT L++GLC G A L+ + P Y +++ LC +
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + ++ +G P + T+L+ L L + + L+ +M+ ILPD V F+ ++
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G+ +A + + +G++PD +TY L+ G+ ++ E + + M+ +GF
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333
Query: 468 PDLATYNSYMDGLSNARK 485
PD+ +Y + ++G K
Sbjct: 334 PDVISYTTLINGYCKIHK 351
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 172/405 (42%), Gaps = 75/405 (18%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCRE 205
F P + +N+F NR+ AF + K++ +P + + LI G +
Sbjct: 85 FGVPPNVYTLNILINSFCHLNRVG---FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+AL +D+M+ + +P+VVT+ LI+G C+ A+ L R M + C P+VV + +
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201
Query: 266 LIRGFFGERKFDEGVNMAYEMIELG------------------CEFSSVTC--------- 298
+I +R+ E N+ +M+ G CE+ VT
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261
Query: 299 --------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+VD LC EG+V +A E+V +RGV P Y L++ C + A+
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE---------------- 394
+V D + +KG P VI+ TTLI G ++ K +A L E+M ++
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381
Query: 395 -------------------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
G +PD VT++ LL+ LC +A L L+PD
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+I++ G R + +L + + +G P + TYN + GL
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V I++ +++ K + +A D M++ V+PDVVT+ L+ G C + D A+ +
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M KG P+V+S+ TLI G+ K D+ + + EM + T L+ GLC+
Sbjct: 324 FDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCH 383
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ A L + RG +P Y L++ LC + A+ ++ + P +
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+I+G+ R + A L + +G+ P T+N ++ LC G +A++L +
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
PDG TY+ + G+ + N L+ EML GF D++T ++ LS+
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y L++ E+ ++MV ++ PDVV F+ ++ C+ K A +
Sbjct: 229 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 288
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G P+VV++ TL+ G + + DE V + M+ G ++ L++G C
Sbjct: 289 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 348
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
++ KA L + R+ +P Y L+ LC G A+ + E+ +G +P ++
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ L++ L + EA L++ + + PD +N +++ +C G A L S
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+KGL P TY+I++ G + E L EM PD TYN+ G +++
Sbjct: 469 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528
Query: 488 RQTR 491
R +
Sbjct: 529 RAIQ 532
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 139/326 (42%), Gaps = 48/326 (14%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY 213
IF V+A K ++ + A E + +I P V Y L++G E D+A+ +
Sbjct: 268 IFSTVVDALCKEGKVTE---AHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D MVR PDV+++ LI+G+C+ K D A+ LF EM K P+ ++NTL+ G
Sbjct: 325 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384
Query: 274 RKFDEGVNMAYEMIELG------------------CEFSSVTC----------------- 298
+ + + + +EM+ G C
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
I++DG+C G + A +L + S +G+ P + Y ++ LC G A ++ E+
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM-- 502
Query: 359 KGNLPSVIACT--TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
GN S CT T+ G + + + A L+E+ML G D T L+E L D G
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG-- 560
Query: 417 VDADRLRLLASTKGLDPDGMTYHILV 442
+D L+ S L D Y I +
Sbjct: 561 LDQSSCFLMLSV--LSEDDRRYFIFI 584
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +YN++I+G + E + A + + + P V T+NI+I G C+ + A L
Sbjct: 439 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM C+P+ ++NT+ RGF + + + EM+ G T +LV+ L +
Sbjct: 499 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558
Query: 308 EGRVLKACELVIDF----SRRG--VLPKDFDYFG 335
+G +C L++ RR +P+ FD G
Sbjct: 559 DGLDQSSCFLMLSVLSEDDRRYFIFIPEGFDLLG 592
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 2/316 (0%)
Query: 175 LAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+A E ++ L++ P+ IYN LING+ + E + A + +M +KPD +T+N LI
Sbjct: 221 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 280
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ ++ A L EM++ G NP V +FNTLI + + ++ + EM E G +
Sbjct: 281 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ V+ +V+ C G++ +A ++ D + VLP Y +++ G A +
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 400
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
V+++ G PS++ LI+GL + EA ++ + ++PD+V++N L+ C
Sbjct: 401 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 460
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A L+ G+ TYH L+SG R E E L +M+ +P A
Sbjct: 461 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 520
Query: 473 YNSYMDGLSNARKSVR 488
+N ++ S ++
Sbjct: 521 HNIMVEAYSKYGNEIK 536
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV-KPDVVTFNILISGFCRNKKFDLAL 245
RP +N + V + +A+G RM RD P+ ++N++I+G R + A+
Sbjct: 24 RPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAV 83
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+F EM E+ PN +++NT+I G + G + +M+ G + +++T +L+ GL
Sbjct: 84 EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGL 143
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C GR+ + L+ + + + ++P F Y L + L G++ L + + K G
Sbjct: 144 CRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD 203
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
C+ L+ GL + K A +++ ++ G++P V +N L+ C G A
Sbjct: 204 YTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQ 263
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
++ + PD +TY+ L++G + R ++L+ EM D G P + T+N+ +D
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N KA R+ + A + + ++ D P+V +N LI+ + + + +K
Sbjct: 276 YNALINGLCKAERITN---AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLS 332
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + +KP+VV++ +++ FC+N K A+ + +M K PN +N +I +
Sbjct: 333 EMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHG 392
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D+ + +M G S VT +L+ GLCN+ ++ +A E++ S ++P Y
Sbjct: 393 PNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYN 452
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C GN AL++ + K G +V LI GL + E L +KM++
Sbjct: 453 TLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN 512
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++P + N ++E G + A+ LR
Sbjct: 513 NVVPSNAIHNIMVEAYSKYGNEIKAEDLR 541
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+NG K + A +V + P V +N LI+G+C+ + + A F +M+
Sbjct: 207 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 266
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ P+ +++N LI G + ++ EM + G + T L+D G++ K
Sbjct: 267 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 326
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
++ + G+ P Y +V C G A+ ++D+++ K LP+ +I+
Sbjct: 327 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+A L+EKM GI P VT+N L++ LC+ + +A+ + S L P
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D ++Y+ L+S + +L M G + TY+ + GL A +
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGR 498
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 141/324 (43%), Gaps = 35/324 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF------------------ 228
+P+ YNVL++G + + D M ++ PD T+
Sbjct: 130 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 189
Query: 229 -----------------NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+IL++G C++ K +A + + + G P V +NTLI G+
Sbjct: 190 LFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 249
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ + + +M + +T L++GLC R+ A +L+++ GV P
Sbjct: 250 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVE 309
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L++ G V+ E+ + G P+V++ +++ + K EA +++ M
Sbjct: 310 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM 369
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +LP++ +N +++ + G A L + G+ P +TY++L+ G +++
Sbjct: 370 FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQI 429
Query: 452 KEGENLVNEMLDEGFIPDLATYNS 475
E E ++N + + IPD +YN+
Sbjct: 430 SEAEEIINSLSNHRLIPDAVSYNT 453
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
DH T+ ++ L + R + +L + N P +E F+ ++A+ +
Sbjct: 272 DHITYNALINGLCKAERITNAQDLLMEMQDNGVN---------PTVE-TFNTLIDAYGRT 321
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ + M++ +G +P+V Y ++N F K + +A+ D M V P+
Sbjct: 322 GQLEKCFIVLSEMQE--NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 379
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N +I + + D A L +M+ G +P++V++N LI+G + + E + +
Sbjct: 380 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 439
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+V+ L+ C G + KA +L + G+ Y L+ L G G
Sbjct: 440 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 499
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+ ++ + +PS ++E + ++A L ++ML++
Sbjct: 500 NEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VNAF K ++ + + + M D P+ +YN +I+ +V+ D+A ++M +
Sbjct: 350 VNAFCKNGKIPEAVAILDDMFHK-DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P +VT+N+LI G C + A + + P+ VS+NTLI D+ +
Sbjct: 409 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 468
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ M + G + + T L+ GL GR+ + L + V+P + + +VE
Sbjct: 469 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 528
Query: 341 CGEGNAGIALEVVDELWKKGN 361
GN A ++ E+ +K N
Sbjct: 529 SKYGNEIKAEDLRKEMLQKRN 549
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 157/336 (46%), Gaps = 39/336 (11%)
Query: 187 RPSVSIYNVLINGF-VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P V YN+LIN + ++ R D ALGF M+++ KP ++TF+ +I+ FC A
Sbjct: 310 EPDVYAYNILINAYRIRGRTSD-ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEAR 368
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY-EMIELGCEFSSVTCEILVDG 304
+F ++E G +PNV +NTL+ G+F R + NM Y EM + G T ILV G
Sbjct: 369 KIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQA-NMLYEEMRDKGIAPDGATFNILVAG 427
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G+ + EL D+S ++P Y V LC G A++ ++++ +KG PS
Sbjct: 428 NYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPS 487
Query: 365 VIA-----------------------------------CTTLIEGLRRLRKGVEASGLME 389
V+A C++++ GL + + EA L+
Sbjct: 488 VVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLY 547
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
KM+ +G+ + V F LL+ VG T A L +G+ PD + + + G ++
Sbjct: 548 KMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAG 607
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+E +EM +GF+P+ YNS + GL N K
Sbjct: 608 LVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGK 643
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 166/402 (41%), Gaps = 71/402 (17%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + AF + + FE +++ + P+V++YN L++G+ K R+ +A Y+ M
Sbjct: 351 FSTIITAFCNEGNVVEARKIFEGIQE-VGLSPNVAMYNTLMSGYFKARDVCQANMLYEEM 409
Query: 217 VRDRVKPDVVTFNILISG-----------------------------------FCRNKKF 241
+ PD TFNIL++G C +
Sbjct: 410 RDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQL 469
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGF------------------FG----------- 272
D A+ +M EKG P+VV+FN++I + FG
Sbjct: 470 DEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSM 529
Query: 273 ------ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ + E ++ Y+MI+ G + V +L+DG G A L + RG+
Sbjct: 530 LLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGI 589
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + ++ L G A E E+ KKG +P+ +LI GL K EA
Sbjct: 590 CPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK 649
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L +M ++G+LPD T N ++ C GR A G+ PD +TY+ L+ GY
Sbjct: 650 LEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYC 709
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + +N+M G+ PD+ TYN + G +++K R
Sbjct: 710 KVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISR 751
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 35/328 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR-------NKK 240
P S+Y+V + G + D+A+ F + M+ + P VV FN +I+ + R +K
Sbjct: 451 PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKA 510
Query: 241 FDLAL----------------------------GLFREMREKGCNPNVVSFNTLIRGFFG 272
+ + L L +M +KG N V+F L+ G+F
Sbjct: 511 YKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFK 570
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
++ YEM G ++ +DGL G V +A E + S++G +P +F
Sbjct: 571 VGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFV 630
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ LC G AL++ E+ +KG LP + +I G + + A +M
Sbjct: 631 YNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMH 690
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G+ PD+VT+N L+ C V V AD G DPD TY+I + G+ +
Sbjct: 691 HIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKIS 750
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+++E++ G +P+ TYN+ M+ +
Sbjct: 751 RAVTMLDELIAVGVVPNTVTYNTMMNAV 778
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 36/328 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I + + F+ + + L MR+ + RPS S ++L ++ ++
Sbjct: 210 ILNTLMRGFMNSEMAYESLEILSRMRE-VGVRPSSSAISILFRLLLRVGDYGSVWKLLRG 268
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+RD +P FNI+I FC+ +A L M + C P+V ++N LI + +
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + + MI+ GC+ S +T ++ CNEG V++A ++
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKI------------------ 370
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
E + E+ G P+V TL+ G + R +A+ L E+M +G
Sbjct: 371 --------------FEGIQEV---GLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKG 413
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD TFN L+ G+ D+ L S L PD Y + V+G + E
Sbjct: 414 IAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAM 473
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ +ML++G P + +NS + S A
Sbjct: 474 QFLEDMLEKGMPPSVVAFNSVIAAYSRA 501
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 16/318 (5%)
Query: 176 AFEAMRKLID-GRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + + K+ID G P + + VL++G+ K + A + M + PD + F+ I
Sbjct: 542 ARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFID 601
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + + A F EM +KG PN +N+LI G K E + + EM + G
Sbjct: 602 GLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLP 661
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
T I+++G C EGR+ A + + GV P Y L+ C + A E +
Sbjct: 662 DIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFL 721
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-- 411
++++ G P + I+G +K A ++++++ G++P++VT+N ++ +C
Sbjct: 722 NKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD 781
Query: 412 --DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE----GENLVNEMLDEG 465
D + A L++ P+ +T ++L+S + ++ ++ G+ L N++L
Sbjct: 782 MLDRAMVLTAKLLKM-----AFVPNVVTTNVLLSHFCKQGMPEKALIWGQKL-NKLLRAD 835
Query: 466 FIPDLATYNSYMDGLSNA 483
FI Y MD + A
Sbjct: 836 FIGYWLVYILSMDKQATA 853
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 35/222 (15%)
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
NTL+RGF E + + M E+G SS IL L G +L+
Sbjct: 211 LNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMI 270
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
R G P + ++ ++ C +G +A
Sbjct: 271 RDGPRPCNHNFNIMILCFCQKGYLRVA--------------------------------- 297
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
L+ M K PD +N L+ GRT DA L G P +T+ ++
Sbjct: 298 --ESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTII 355
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ + E E + + + G P++A YN+ M G AR
Sbjct: 356 TAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKAR 397
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 150/303 (49%), Gaps = 20/303 (6%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L++ K R KA R + R PDVVT+N L G+CR K AL L R+M
Sbjct: 165 LFNSLLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQM 223
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-----CEFSSVTCEILVDGLC 306
E G P ++N +++GFF + N +M + G C+ V+ ++ GL
Sbjct: 224 AESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLG 283
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ KA +L + S+ G P Y L++ +C +GN A+ V D++ +K +P+V+
Sbjct: 284 VAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVV 343
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA----DRL 422
T LI GL + K A LME+M EG P T+N L+ + G A +R+
Sbjct: 344 TYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERM 403
Query: 423 RLLASTKGLD--PDGMTYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYM 477
+KG D P+ TY+I++S R ++ +V EM++ G++P N +
Sbjct: 404 -----SKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVL 458
Query: 478 DGL 480
+GL
Sbjct: 459 NGL 461
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV+ YN LI K + A+ +D MVR P+VVT+ +LI G C K D A+ L
Sbjct: 305 PSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKL 364
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGL 305
M+ +GC P V ++N LIR F E + ++ + + +E + G C + T I++ +
Sbjct: 365 MERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCL-FERMSKGEDCLPNQDTYNIIISAM 423
Query: 306 CNEGR---VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
R + A +V++ RG LP+ F ++ L GN I+ +++
Sbjct: 424 FVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQISRDLL 474
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 8/227 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL----IDGRPSVSIYNVLINGFVKCREFDKALGF 212
++ + F +A ++ F M+K +P + Y +I+G + DKA
Sbjct: 235 YNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKL 294
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M ++ P V T+N LI C+ + A+ +F +M K PNVV++ LIRG
Sbjct: 295 FDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCH 354
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDF 331
K D + + M GCE T +L+ EG + KA L S+ LP
Sbjct: 355 VGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPNQD 414
Query: 332 DYFGLVEKLCGEGNA---GIALEVVDELWKKGNLPSVIACTTLIEGL 375
Y ++ + A A +V E+ ++G LP ++ GL
Sbjct: 415 TYNIIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGL 461
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 8/191 (4%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDF-DYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+D L KA LV RR P D Y L + C + AL+++ ++ +
Sbjct: 169 LLDALGKSRHASKAASLVRALERR--FPPDVVTYNTLADGWCRAKDTSRALDLLRQMAES 226
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL-----PDSVTFNCLLEDLCDVG 414
G P+ +++G R + A +M K G PD V++ ++ L G
Sbjct: 227 GVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAG 286
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ A +L S +G P TY+ L+ ++ ++ + ++M+ + ++P++ TY
Sbjct: 287 QLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYT 346
Query: 475 SYMDGLSNARK 485
+ GL + K
Sbjct: 347 VLIRGLCHVGK 357
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 219/534 (41%), Gaps = 75/534 (14%)
Query: 9 PPILIHNKSPPPPPAPSIP--LPSRPETPPVTLPSVTLTPTAHHTHLLRF--------LK 58
P + PP P+P +P + +PP TL + T LLR L+
Sbjct: 38 PSPYASGSAAPPTPSPWLPRVISLVLRSPPATLAADLRAFC--RTFLLRLSPAFVAAALR 95
Query: 59 THLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRS 118
+ LLTP P LHF +S + H H+ + S + SF T I
Sbjct: 96 SPLLTPH-----PLPSLHFFRSLPNGADLLAHPQHHLSCYVSLLHSFARSRET---IGPD 147
Query: 119 LASSYR--FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLA 176
A R +EL + + + + P S+ + ++ AF + + L A
Sbjct: 148 AAGQARQLVAELRAHGDAVLRHLSPASSASLIR----------SLAAFGLSEEL---LWA 194
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM-VRDRVKPDVVTFNILISGF 235
++AMR L PS YN L++G V D A+ +D M DRV+PDVV++NILI G+
Sbjct: 195 WQAMR-LAGVEPSRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGY 253
Query: 236 CRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-------- 286
CR + + ++RE+ P+ V++ TL++ + E F + + + EM
Sbjct: 254 CRAGRTQDGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMGKE 313
Query: 287 -----------------------------IELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
++ GC ++ L+D + GR +A L
Sbjct: 314 IPQHAYVLVIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSMGKLGREKEAMAL 373
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
G+ Y +V LC GN AL +KG + I T+LI+G +
Sbjct: 374 FERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGK 433
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+A L E+M+ +G +PDS +N L++ L GRT A G D T
Sbjct: 434 TGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMEDDGCDQTVYT 493
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
Y IL+ G +E++ +E + M+D+G P A + +GL + K R R
Sbjct: 494 YTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLANGLCLSGKFSRAWR 547
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 133/314 (42%), Gaps = 4/314 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS-VSIYNVLINGFVKCREFDKALGF 212
+ + + A K + + L FE M K G P+ ++Y LI+ K +A+
Sbjct: 316 QHAYVLVIGALSKDGKPFEALAVFERMLK--RGCPANAAMYTALIDSMGKLGREKEAMAL 373
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++RM ++ D VT+ ++++ CR + AL FR EKG N + + +LI GF
Sbjct: 374 FERMKASGIELDAVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGK 433
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
D+ + EMI G S +L+D L GR AC G +
Sbjct: 434 TGMVDQAKELFEEMIAKGFVPDSYCYNVLIDALVKAGRTDIACAFYERMEDDGCDQTVYT 493
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ L E AL+ D + KG P+ A L GL K A +++++
Sbjct: 494 YTILIDGLFKEHKNEEALKFWDSMIDKGITPTAAAFRVLANGLCLSGKFSRAWRILDELA 553
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G++P++ + ++ LC GR A +L KG + G ++++ +
Sbjct: 554 PMGVIPETAHED-MINVLCKTGRFKQACKLADGIVQKGREVPGRVRTMMINALRKAGNTD 612
Query: 453 EGENLVNEMLDEGF 466
LV+ + G+
Sbjct: 613 LAFKLVHSKIGIGY 626
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 38/409 (9%)
Query: 98 WASTID-SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI 156
W T+ + TF ++ L R +E +L+ + CP
Sbjct: 487 WKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE----------LRCPPDSLT 536
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + + K ++ M L PSV ++N I G +++ K + M
Sbjct: 537 YRTLFDGYCKLGQLGTATHLMNKMEHL-GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P++VT+ LI+G+C+ A L+ EM G NPNV + L+ F+ E K
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655
Query: 277 DEGVNMAYEMIEL----GCEFSSVTCE----------------------ILVDGLCNEGR 310
DE + +++ + GC S++ + +++ GLC GR
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A L + LP +F Y L+ G+ A + D + G P++I +
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + K A L K+ +GI P+ +T+N L+++ C G+T +A +L+ +G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ P +TY IL+ G + +E L+++M++ P+ TY + + G
Sbjct: 836 IQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 1/332 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +N K RM + + M + RP YN LI+G+ + KA
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMED-VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRM 419
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR+ + +T+N L+ GFC D AL L+ M ++G PN +S +TL+ G F K
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGK 479
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ +N+ E + G + +T +++GLC GR+ +A EL+ P Y
Sbjct: 480 TEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L + C G G A +++++ G PSV + I G ++ + + + +M G
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ VT+ L+ C G +A L G++P+ L+S + +E + E
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
++ ++++ IP + +D +S+ ++
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTI 691
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 139/323 (43%), Gaps = 35/323 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V + K RM + + M++ D Y ++ING+ + D A + M
Sbjct: 291 YTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEM 350
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++ +N +I+G C+ + + + +EM + G P+ S+NTLI G+ E
Sbjct: 351 RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSM 410
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M M+ G +++T L+ G C+ + A L +RGV P +
Sbjct: 411 RKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE------ 464
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
I+C+TL++GL + K +A L ++ L G+
Sbjct: 465 -----------------------------ISCSTLLDGLFKAGKTEQALNLWKETLARGL 495
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ +TFN ++ LC +GR +A+ L PD +TY L GY + + +
Sbjct: 496 AKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATH 555
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L+N+M GF P + +NS++ G
Sbjct: 556 LMNKMEHLGFAPSVEMFNSFITG 578
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 201/472 (42%), Gaps = 58/472 (12%)
Query: 53 LLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTF 112
L RF L +++ +TP+ L L+ ++ P H+F A + S H
Sbjct: 52 LHRFPAAERLLASSSPLTPALLQAALR-RVRLDPDAA---LHLFRLAPSRPSLV-SHAQL 106
Query: 113 LFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIF-SCPEMERIFHFAVNAF------- 164
L I LA + RF + ++L+ + + P +F E+ R F F+ +F
Sbjct: 107 LHI---LARARRFHDARALLSSLPPHAEP-----LFPHLAEVYRDFTFSAVSFDLLLRAH 158
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
A +++ L F+ M K + RPS+ N L+N V+ + A Y +M V PD
Sbjct: 159 ADAGQLSSALNVFDGMGK-VGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217
Query: 225 VVTFNILISGFCRNKKFDLALGLFREM--------------------------------- 251
T I+ +CR+ + A+ EM
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277
Query: 252 --REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNE 308
+ KG +PNVV++ L++G+ + + +E + EM E G V ++++G C
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ A + + G+ F Y ++ LC G +V+ E+ G P +
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TLI+G R +A + M++ G+ ++T+N LL+ C + DA RL L
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G+ P+ ++ L+ G + + ++ NL E L G ++ T+N+ ++GL
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 154/376 (40%), Gaps = 63/376 (16%)
Query: 176 AFEAMRKLI-DGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AFE R ++ +G + ++ YN L+ GF D AL + M++ V P+ ++ + L+
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + K + AL L++E +G NV++FNT+I G + E + M EL C
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532
Query: 294 SSVTCEILVDGLCNEGRVLKACELV----------------------------------- 318
S+T L DG C G++ A L+
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ S RG+ P Y L+ C EGN A + E+ G P+V C+ L+ +
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652
Query: 379 RKGVEASGLMEKMLKEGILPD--------------------------SVTFNCLLEDLCD 412
K EA+ +++K++ ++P +V +N ++ LC
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR DA L K PD TY L+ G E +L + ML G P++ T
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772
Query: 473 YNSYMDGLSNARKSVR 488
YNS + GL + K R
Sbjct: 773 YNSLIYGLCKSGKLSR 788
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFY 213
+++ + K+ R+ D FE++R + R P Y+ LI+G D+A
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLR---NKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D M+ + P+++T+N LI G C++ K A+ LF +++ KG +PN +++NTLI + E
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K E + +M+E G + + +T IL+ GLC +G + +A +L+ V P Y
Sbjct: 819 GKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY 878
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
L+ GN ++ DE+ +G LP+
Sbjct: 879 CTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 2/224 (0%)
Query: 183 LIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+ DG P + ++NV+I G K A ++ + R PD T++ LI G +
Sbjct: 691 IADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGS 750
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D A L M G PN++++N+LI G K VN+ ++ G + +T
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+D C EG+ +A +L G+ P Y L+ LC +G A++++D++ +
Sbjct: 811 LIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENN 870
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
P+ I TLI G + E S L ++M G+LP + N
Sbjct: 871 VDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 158/332 (47%), Gaps = 3/332 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ F ++ + FE MR K I+ V +Y +I+ + +AL +D
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIE--ADVYVYTSIISCNCRSGNVKRALVLFDE 359
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P T+ LI G C+ + + A L EM+ KG + N V FNTLI G+
Sbjct: 360 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + + M + G E + GLC R +A L+ RGV P +
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C EGN A V E+ +KGN+P++I LI+G + EA L +++ G
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++PD T L+ C G+ A +L +GL P+ +TY ++SG +++ R +E
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L +EM + G PD Y+S + L +A +S+
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLVGSLHSADESI 631
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 202/477 (42%), Gaps = 52/477 (10%)
Query: 25 SIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHH 84
S L S T PS+ + + HL+ L H+LT + HF++ K ++
Sbjct: 35 SKTLVSSGAKSLQTTPSLLSSLNSQTVHLI--LSNHILTAE----SCLDFFHFIR-KNYY 87
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN 144
P Y IF + S + L S +F+E+ + N C +
Sbjct: 88 KPDLRAYITLIFKLYRSRKSDK------------LHKSQKFAEIRHLFN------CAAVD 129
Query: 145 DGIF------------SCPE--------MERIFHFAVNAFVKANRMNDGLLAFEAMRKL- 183
DG+ +C E E+ F + + L AFE M K
Sbjct: 130 DGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKG 189
Query: 184 --IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
ID R + V + + + D L F+ RMV V+ V + I++ G C+
Sbjct: 190 FHIDERSCL----VYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDV 245
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
++ L E+ KG NVV++N I G+F + M + G + VT +L
Sbjct: 246 EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLL 305
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ G N G++ +A L + +G+ + Y ++ C GN AL + DE+ KG
Sbjct: 306 IHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGL 365
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+PS LI G+ + + A L+ +M +GI + V FN L++ C+ G +A R
Sbjct: 366 IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR 425
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L+++ KGL+ D Y+ + SG + NR+ E + L+ M++ G P+ ++ + +D
Sbjct: 426 LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLID 482
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%)
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F++L + NK F AL F M +KG + + S + + D + M+
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
L E + + I++DGLC G V +L+ + + +GV Y +E + G
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
E++ + K+G +V+ T LI G + K EA L E+M ++GI D + ++
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C G A L + KGL P TY L+ G + + + + LVNEM +G
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401
Query: 468 PDLATYNSYMDG 479
+ +N+ +DG
Sbjct: 402 LNPVIFNTLIDG 413
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 10/226 (4%)
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
F+ L R + + F E + M + G +C + + L G+V +C + F
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQV-DSC---LRFF 217
Query: 323 RRGV-LPKDFDYFGL---VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG-LRR 377
RR V L + + L ++ LC G+ + +++DE+ KG +V+ IEG +R
Sbjct: 218 RRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKR 277
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
L G A ++ M KEG+ + VT+ L+ ++G+ +A RL KG++ D
Sbjct: 278 LDLGGVAE-ILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYV 336
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
Y ++S R K L +EM D+G IP TY + + G+ A
Sbjct: 337 YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 148/337 (43%), Gaps = 10/337 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ AN +D F M + PS YNV+I+ K ++A +M+ D
Sbjct: 365 IHGLCMANSFDDARELFADMNRR-GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK----- 275
PDVVT+N ++ G C++ + + AL LF EM GC PN S NT+I G + K
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483
Query: 276 ----FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
DE + M + G VT L+ GLC+ RV A L+ D +R P
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
L+ LC G A EV+D + G P V+ TL+ G R + A L+ M
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 603
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ G+ P+ VT+ L+ LC R +A + + G P+ TY L+ G+ +
Sbjct: 604 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 663
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
G L EM+ G PD Y + L + +S R
Sbjct: 664 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 700
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 152/305 (49%), Gaps = 9/305 (2%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN++I G + D+A+ +++M V PD ++ ILI G + K + A LF+++
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G P+ V++ +LI G FD+ + +M GC S VT +++D C G +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+AC+L+ G +P Y +++ LC AL + +E+ + G P+ + T+I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 373 EGL-------RRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
GL + ++G EA L+++M +G +PD VT++ L+ LC + R DA L
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ P +T + L+ G + R KE +++ M+ G PD+ TYN+ + G A
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590
Query: 484 RKSVR 488
++ R
Sbjct: 591 GQTER 595
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 20/351 (5%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DGR-PSVSIYNVLINGFVKCREFD 207
CP ++ ++A K + + A + ++K+I DG P V YN +++G K +
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEE---ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 445
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG---------LFREMREKGCNP 258
+AL ++ M R P+ + N +I G C+ K D A L + M + G P
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVP 505
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+VV+++TLI G + D+ ++ +M++ C+ + VT L+ GLC GR+ +A E++
Sbjct: 506 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 565
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
G P Y LV C G A E++ ++ +G P+V+ T L+ GL +
Sbjct: 566 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 625
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ EA G+ +M G P+ T+ L+ C G+ +L G+ PD + Y
Sbjct: 626 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685
Query: 439 HILVSGYTRENRRKEGENLVNE----MLDEGFIPDLATYNSYMDGLSNARK 485
L + + R ++ E + E + ++ Y +DGL A K
Sbjct: 686 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLLEAGK 734
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 170/379 (44%), Gaps = 60/379 (15%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++ V A KA R++D A E R + + R + S+ +VL+ G + D+AL Y
Sbjct: 148 YNIVVVALCKAARVDD---ALELARTMSEKRIPLAAGSLDSVLV-GLMDSGRIDEALQVY 203
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG---- 269
+R +P +VT N+L+ GFC + D A L R M ++ C P+ VS+ T++ G
Sbjct: 204 RE---NRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKA 260
Query: 270 --------FFGER-----------------------------KFDEGVNMAYEMIELGCE 292
FG+R + DE V M +M E
Sbjct: 261 GRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVS 320
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S + IL+DGL G++ A L GV P Y L+ LC + A E+
Sbjct: 321 PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 380
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ ++G PS + +I+ + EA L++KM+++G +PD VT+N +++ LC
Sbjct: 381 FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN---------RRKEGENLVNEMLD 463
R +A L G P+ +++ ++ G +++ + E L+ M D
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD 500
Query: 464 EGFIPDLATYNSYMDGLSN 482
+G +PD+ TY++ + GL +
Sbjct: 501 DGHVPDVVTYSTLISGLCS 519
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 15/267 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ R++D E M K +P+V N LI+G K +A D MV
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKR-QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 572
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PDVVT+N L+ G CR + + A L +M +G PNVV++ L+ G + E
Sbjct: 573 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 632
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M GC + T L+ G C+ G+V +L + G+ P Y L +L
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692
Query: 341 CGEGNAGIALEVV--------DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
C G + ALE++ E W G+ A ++GL K A G + M+
Sbjct: 693 CKSGRSARALEILREGRESLRSEAW--GDEVYRFA----VDGLLEAGKMEMALGFVRDMV 746
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ G LP L+ LC G+ +A
Sbjct: 747 RGGQLPAPERCASLVAGLCKSGQGGEA 773
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 165/446 (36%), Gaps = 109/446 (24%)
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
GIF P +F + + R + + F M + P V YNVLI+ K
Sbjct: 3 QQGIFPAP---LLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKR 57
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP----- 258
+E + MV PD TF ++ G C+ K D A + EMR + P
Sbjct: 58 QETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATS 117
Query: 259 --------------------------NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
N ++N ++ + D+ + +A M E
Sbjct: 118 SFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177
Query: 293 FSS--------------------------------VTCEILVDGLCNEGRVLKACELVID 320
++ VT +L++G C+ G+V KA EL+
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---------------------------- 352
P + Y +++ LC G A+ +
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297
Query: 353 ------VDE---LWKKGN----LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+DE +++K N P + LI+GL + K +A L +K+L G+ P
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+V + L+ LC DA L + +G P +TY++++ + +E +L+
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
+M+++G +PD+ TYN+ MDGL + +
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSR 443
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ KA R+ + +AM + G+ P V YN L++G + + ++A MV
Sbjct: 549 IHGLCKAGRIKEAREVLDAM--VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 606
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+VVT+ L+SG C+ + A G+F +M+ GC PN+ ++ LI GF + D G
Sbjct: 607 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 666
Query: 280 VNMAYEMIELG---------------CEF--SSVTCEIL--------------------V 302
+ + EM+ G C+ S+ EIL V
Sbjct: 667 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 726
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
DGL G++ A V D R G LP LV LC G G A V++E+
Sbjct: 727 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTREN 449
M ++GI P + F +++ C+VGRT +A ++ L+ PD Y++L+ ++
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPD--VYNVLIDSLSKRQ 58
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + +V M+D G PD T+ + + GL A K
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGK 94
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 154/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K R + F++M K P ++ Y L+ G+ + D MVR+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++PD FNILI + + +K D A+ +F +MR+ G NPNVV + T+I D+ +
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+MI+ G + + L+ GLC + KA EL+++ RG+ + +++
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG + ++ D + + G P +I TLI+G K EA+ L+ M+ G+ PD
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L+ C V R DA L + G+ P+ +TY+I++ G R + L
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ G +L+TYN + GL
Sbjct: 612 ITKSGTQLELSTYNIILHGL 631
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 186/414 (44%), Gaps = 17/414 (4%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
N +T SSL+++L +D + T D T+ +++ A+
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFD------SMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
E+H++L+ + N GI P+ +F+ + A+ K +++ +L F MR+
Sbjct: 359 EMHALLDLMVRN-------GIQ--PD-HHVFNILICAYAKQEKVDQAMLVFSKMRQH-GL 407
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P+V Y +I+ K D A+ ++++M+ + + P+++ + LI G C K+D A
Sbjct: 408 NPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEE 467
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM ++G N + FN++I E + E + M+ +G + +T L+DG C
Sbjct: 468 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCC 527
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ +A +L+ GV P Y L+ C AL + E+ G P++I
Sbjct: 528 LAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 587
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+++GL R+ A L + K G + T+N +L LC T +A R+
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + T++I++ + R E ++L G +PD+ TY+ + L
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y +LI + D +V+ + D +TF L+ G C +K+ A+ +
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 248 -FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE---LGCEFSSVTCEILVD 303
R M E GC P+V S+N L++G E + E + + + M + G V+ +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G EG KA + RG+LP Y ++ LC A+EV++ + K G +P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ +++ G + EA G ++KM +G+ P+ VT++ L+ LC GR+ +A ++
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ +GL+PD TY L+ GY + E L++ M+ G PD +N
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 189/427 (44%), Gaps = 52/427 (12%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
FR D TF +++ L + R S+ ++ C D +FS ++ +
Sbjct: 123 FRVDAITFTPLLKGLCADKRTSDAMDIV-LRRMTELGCIPD-VFS-------YNNLLKGL 173
Query: 165 VKANRMNDGLLAFEAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
NR + A E + + D R P V YN ++NGF K + DKA Y M+
Sbjct: 174 CDENRSQE---ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PDVVT++ +I+ C+ + D A+ + M + G P+ +++N+++ G+ + E
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +M G E + VT L++ LC GR +A ++ ++RG+ P Y L++
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 340 LCGEG-------------NAGI----------------------ALEVVDELWKKGNLPS 364
+G GI A+ V ++ + G P+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ T+I+ L + +A E+M+ EG+ P+ + + L+ LC + A+ L L
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+G+ + + ++ ++ + +E R E E L + M+ G PD+ TYN+ +DG A
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 485 KSVRQTR 491
K T+
Sbjct: 531 KMDEATK 537
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 139/280 (49%), Gaps = 7/280 (2%)
Query: 209 ALGFYDRMVR---DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A+ Y+RM R +V P V T+ ILI CR + DL + +KG + ++F
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 266 LIRGFFGERKFDEGVNMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACEL--VIDFS 322
L++G +++ + +++ M ELGC + L+ GLC+E R +A EL ++
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 323 RRGVLPKD-FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
R G P D Y ++ EG++ A E+ +G LP V+ +++I L + +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A ++ M+K G++PD +T+N +L C G+ +A + G++P+ +TY L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
++ + R E + + M G PD+ATY + + G +
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA 352
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P Y L+ C G + + + KKG I T L++GL ++ +A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 386 GL-MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLD--PDGMTYHIL 441
+ + +M + G +PD ++N LL+ LCD R+ +A + L ++A +G PD ++Y+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G+ +E + + +EMLD G +PD+ TY+S + L A+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+S YN++++G K D+AL + + ++ + TFNI+I + + D A LF
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 680
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
G P+V +++ + + +E ++ M E GC S +V L G
Sbjct: 681 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Query: 310 RVLKA 314
+ +A
Sbjct: 741 DITRA 745
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K N ++ L F+ + L D + +N++I +KC D+A +
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNL-CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ + PDV T++++ + LF M E GC+ + N+++R
Sbjct: 683 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%), Gaps = 10/298 (3%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L++ VK R KA R + R PD VT+N L G+CR K AL + R+M
Sbjct: 177 LFNSLLDALVKSRRASKAASLV-RALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQM 235
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-----CEFSSVTCEILVDGLC 306
E G P ++N +++GFF + + +M G C+ V+ ++ GL
Sbjct: 236 VESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLG 295
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ KA ++ + S G P Y L++ C +GN A+ V D++ +KG +P+V+
Sbjct: 296 VAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVV 355
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLL 425
T LI GL K V A L+++M EG P+ T+N L+ + G D +
Sbjct: 356 TYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETM 415
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P+ TY+I++S R ++ +V EM+D G++P +N ++GL
Sbjct: 416 SKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGL 473
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 167 ANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
A +++ F+ M I+G +PS + YN LI K + A+ +D MVR P+V
Sbjct: 297 AGQLDKARKVFDEMS--IEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNV 354
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+ +LI G C K A+ L M+ +GC PNV ++N LIR E + ++G+++ +E
Sbjct: 355 VTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDL-FE 413
Query: 286 MIELG--CEFSSVTCEILVDGLCNEGR---VLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ G C + T I++ + R + A +V++ RG LP+ F + ++ L
Sbjct: 414 TMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGL 473
Query: 341 CGEGNAGIALEVV 353
GN ++ E++
Sbjct: 474 MLTGNQELSRELL 486
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y +++G + DKA +D M + KP T+N LI C+ + A+
Sbjct: 281 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVA 340
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F +M KG PNVV++ LIRG K + + M GCE + T +L+
Sbjct: 341 VFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSL 400
Query: 307 NEGRVLKACELVIDFSR-RGVLPKDFDYFGLVEKLCGEGNA---GIALEVVDELWKKGNL 362
EG + K +L S+ LP Y ++ + A +A +V E+ +G L
Sbjct: 401 EEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYL 460
Query: 363 PSVIACTTLIEGL 375
P ++ GL
Sbjct: 461 PRKFMFNRVLNGL 473
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+D L R KA LV +R P Y L + C + AL+++ ++ + G
Sbjct: 181 LLDALVKSRRASKAASLVRALEQR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESG 239
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG-----ILPDSVTFNCLLEDLCDVGR 415
P+ +++G R + A +M + G PD V++ +L L G+
Sbjct: 240 IAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQ 299
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A ++ S +G P TY+ L+ ++ ++ + ++M+ +G+IP++ TY
Sbjct: 300 LDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTV 359
Query: 476 YMDGLSNARKSVRQTR 491
+ GL +A K VR +
Sbjct: 360 LIRGLCHAGKVVRAMK 375
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 3/289 (1%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG-L 247
+V Y +L++ + R D F R++R +K + + C K+ D A+ L
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGL 305
M E C P+ +S+NT+I+ G+ + E ++M M + G C V+ ++ G
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+G V KAC L + ++GV+P Y +V+ LC A V+ ++ KG P
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +I G E++ + KM +G++PD+VTF+ + LC GR+ DA+ +
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY 362
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+TKG PD ++Y IL+ GY E R + NL + M D+G + + N
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCIN 411
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 4/336 (1%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCRE 205
SC ++ + + +R + L + M K GR P V +N +I+GF K E
Sbjct: 189 LSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE-GGRCSPDVVSFNTVIHGFFKQGE 247
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
KA ++ MV+ V PDV T+N ++ C+ + D A + R+M +KG P+ V++N
Sbjct: 248 VSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNA 307
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I G+ + E M +M G +VT + LC GR A E+ + +G
Sbjct: 308 IIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+P Y L+ EG + + KG + + LI + EA
Sbjct: 368 HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAM 427
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ +M +G+ P+ VT++ L+ C +GR DA + G++P+ YH L+ G+
Sbjct: 428 LVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGF 487
Query: 446 TRENRRKEGENLVNEMLDEGF-IPDLATYNSYMDGL 480
+ + ++EM+ +G P++ ++S + L
Sbjct: 488 CMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSL 523
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 41/368 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V+A KA M+ +R+++D P YN +I+G+ + ++ +
Sbjct: 270 YNSIVDALCKARAMDKAEFV---LRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFR 326
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M + PD VTF+ +S C++ + A +F+ M KG P++VS++ L+ G+ E
Sbjct: 327 KMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEG 386
Query: 275 KF-----------------------------------DEGVNMAYEMIELGCEFSSVTCE 299
+F DE + + EM G + VT
Sbjct: 387 RFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYS 446
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ C GR+ A E G+ P Y L+ C G+ A E + E+ K
Sbjct: 447 TLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK 506
Query: 360 G-NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G + P+++ +++I L + ++A + ++ G P VTFN L++ C VG+
Sbjct: 507 GLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEK 566
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + + G++PD +T + LVSGY + + +G L EML + P TYN +D
Sbjct: 567 AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLD 626
Query: 479 GLSNARKS 486
GL A ++
Sbjct: 627 GLLRAGRT 634
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 25/305 (8%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N+LI+ K D+A+ + M V+P+VVT++ LIS FCR + A+ F +M
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE------FSSVTCEILVDGLCN 307
G PN +++LI GF + EM+ G FSS+ + LC
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSI-----IHSLCI 525
Query: 308 EGRVLKACE---LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
EGRV+ A + LVI R P + L++ C G A V+D + G P
Sbjct: 526 EGRVMDAQDVFNLVIHIGDR---PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPD 582
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-- 422
V+ TL+ G + K + L +ML + + P +VT+N +L+ L GRT A ++
Sbjct: 583 VVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFH 642
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM--LDEGFIPDLATYNSYMDGL 480
++ S +D D TY IL+ G R + E L +++ +D F D+ N+ ++ L
Sbjct: 643 EMIDSGTAVDID--TYKILLKGLCRNDLTDEAITLFHKLGAMDCKF--DITILNTMINAL 698
Query: 481 SNARK 485
R+
Sbjct: 699 YKVRR 703
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 43/285 (15%)
Query: 210 LGFYDRMVRDRVKPDVV-----TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
L ++R+ R+ P V T+ IL+ CR ++ DL + G +
Sbjct: 104 LALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQAT 163
Query: 265 TLIRGFFGERKFDEGVN-MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
T ++ ++ DE V+ + + M EL C
Sbjct: 164 TFLKCLCHAKRTDEAVDVLLHRMSELSC-------------------------------- 191
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGLRRLRKG 381
+P Y +++ LCG+ + AL++V + K+G P V++ T+I G + +
Sbjct: 192 ---VPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEV 248
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A L +M+++G++PD T+N +++ LC A+ + KG++PDG+TY+ +
Sbjct: 249 SKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAI 308
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ GY+ KE + +M +G IPD T++S+M L +S
Sbjct: 309 IHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 163/378 (43%), Gaps = 20/378 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSEL----HSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
D ++ ++ A+ RF+++ HS+ + + C C N ++A
Sbjct: 371 DIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCIN--------------ILISA 416
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
K M++ +L F M+ RP+V Y+ LI+ F + A+ + +M+ ++P
Sbjct: 417 HAKRGMMDEAMLVFTEMQGQ-GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCN-PNVVSFNTLIRGFFGERKFDEGVNM 282
+ ++ LI GFC + A EM KG + PN+V F+++I E + + ++
Sbjct: 476 NTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDV 535
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+I +G + VT L+DG C G++ KA ++ G+ P LV C
Sbjct: 536 FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCK 595
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G L + E+ K P+ + +++GL R + A + +M+ G D T
Sbjct: 596 SGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDT 655
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ LL+ LC T +A L D + +++ + RR+E +L +
Sbjct: 656 YKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIS 715
Query: 463 DEGFIPDLATYNSYMDGL 480
G +P+++TY + L
Sbjct: 716 TSGLVPNVSTYGVMIRNL 733
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 51/296 (17%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I RP++ +N LI+G+ + +KA G D MV ++PDVVT N L+SG+C++ K D
Sbjct: 542 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDD 601
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
L LFREM K P V++N ++ G + M +EMI+ G T +IL+
Sbjct: 602 GLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 661
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC +A L F + G + FD
Sbjct: 662 GLCRNDLTDEAITL---FHKLGAMDCKFD------------------------------- 687
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ T+I L ++R+ EA+ L + G++P+ T+ ++ +L G +AD +
Sbjct: 688 -ITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMF 746
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G P + +++ +L +G I Y S +DG
Sbjct: 747 SSMEKSGCAPSSRLLN----------------DIIRMLLQKGDIVKAGYYMSKVDG 786
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 2/309 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF + R+ D + F M I P+ ++Y+ LI+GF + KA F M+
Sbjct: 449 ISAFCRMGRLADAMEKFSQMIS-IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507
Query: 221 V-KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ +P++V F+ +I C + A +F + G P +V+FN+LI G+ K ++
Sbjct: 508 LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 567
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M+ +G E VT LV G C G++ L + + V P Y +++
Sbjct: 568 FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDG 627
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L G A ++ E+ G + L++GL R EA L K+ D
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 687
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
N ++ L V R +A+ L ST GL P+ TY +++ +E +E + + +
Sbjct: 688 ITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFS 747
Query: 460 EMLDEGFIP 468
M G P
Sbjct: 748 SMEKSGCAP 756
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 174/364 (47%), Gaps = 45/364 (12%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALG 211
++ + F NR + A E + + DG+ P++ YN +INGF + DKA
Sbjct: 169 YNTLLKGFCDENRAEE---ALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYN 225
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M + P+VVT+ I+I G C+ + D A G+F++M +KG PN+V++ LI G+
Sbjct: 226 LFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYL 285
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
++ E V M EM G E T +L+D LC +G+ +A +L R+G+ P D
Sbjct: 286 SIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKP-DV 344
Query: 332 DYFGLV-----------------EKLCGEGNA-------------------GIALEVVDE 355
+G++ + + G G + G A+++ ++
Sbjct: 345 SIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNK 404
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ ++G P+V+ TLI+ L +L + +A +M+ EG+ P+ V F L+ LC + +
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L +G+ P+ + ++ ++ E R + + L++ M G PD+ +YN+
Sbjct: 465 WEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNA 524
Query: 476 YMDG 479
+ G
Sbjct: 525 LIRG 528
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 149/307 (48%), Gaps = 6/307 (1%)
Query: 181 RKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
RKL D +P VSIY ++++G+ + F D MV + + P+ FNI+
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCA 388
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
F + A+ +F +MR++G +PNVV++ TLI + D+ +MI G +
Sbjct: 389 FAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPN 448
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
V LV GLC + KA EL + +G+ P + ++ LC EG A ++D
Sbjct: 449 IVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLID 508
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ + G P +I+ LI G + K EAS L++ ML G+ P+ T+N LL C G
Sbjct: 509 LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDG 568
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
R DA + + G+ P +TY+ ++ G + R E + L M+ G + TYN
Sbjct: 569 RIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYN 628
Query: 475 SYMDGLS 481
++GLS
Sbjct: 629 IILNGLS 635
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 13/367 (3%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D + + I+ A+ SE+HS L+ + N GI IF+ AF K
Sbjct: 343 DVSIYGIILHGYATKGALSEMHSFLDLMVGN-------GI---SPNHYIFNIVFCAFAKK 392
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ + + F MR+ G P+V Y LI+ K D A +++M+ + V P++V
Sbjct: 393 AMIGEAMDIFNKMRQ--QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
F L+ G C K++ A LF EM +G +PNVV FNT++ E + + + M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+G ++ L+ G C G+ +A +L+ G+ P + Y L+ C +G
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A V E+ G P V+ T++ GL + R+ EA L M+ G T+N +
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L L +A ++ +K L D +T++I++ ++ R+++ NL + G
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690
Query: 467 IPDLATY 473
+PD+ TY
Sbjct: 691 VPDVTTY 697
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 168/380 (44%), Gaps = 64/380 (16%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID-----GRP-SVSIYNVLINGFVKC 203
C E+ERI R G L+ + KL D RP S+ +N L+
Sbjct: 13 CLELERII---------GARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSA 63
Query: 204 REF------DKALGFYDRMVRD---RVKPDVVTFNILISGFCR----------------- 237
+ + ++RM+RD +V PDV T++IL+ FCR
Sbjct: 64 SRRGSSSTSELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKT 123
Query: 238 -------------------NKKFDLALG-LFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
K+ A+G L R M E GC PNVVS+NTL++GF E + +
Sbjct: 124 GWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAE 183
Query: 278 EGVNMAYEMIE---LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + + + M + C + V+ +++G EG+V KA L +D + +G+ P Y
Sbjct: 184 EALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYT 243
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ LC A V ++ KG P+++ T LI G + + E ++++M
Sbjct: 244 IVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAH 303
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD T+ LL+ LC G+ +A +L KG+ PD Y I++ GY + E
Sbjct: 304 GLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEM 363
Query: 455 ENLVNEMLDEGFIPDLATYN 474
+ ++ M+ G P+ +N
Sbjct: 364 HSFLDLMVGNGISPNHYIFN 383
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 153/325 (47%), Gaps = 5/325 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ KA ++ F+ M ID RP++ Y LI+G++ ++ + +
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQM---IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLK 298
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++PD T+ +L+ C+ K A LF M KG P+V + ++ G+ +
Sbjct: 299 EMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKG 358
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + M+ G + I+ + + +A ++ ++G+ P +Y
Sbjct: 359 ALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYA 418
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A +++ +G P+++ T+L+ GL + K +A L +M+ +
Sbjct: 419 TLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI P+ V FN ++ +LC GR + A RL L G PD ++Y+ L+ G+ + E
Sbjct: 479 GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
L++ ML G P+ TYN+ + G
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHG 563
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ I+N++ F K +A+ +++M + + P+VV + LI C+ + D A
Sbjct: 377 PNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELK 436
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M +G PN+V F +L+ G K+++ + +EM+ G + V ++ LC
Sbjct: 437 FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCT 496
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGRV+KA L+ R G P Y L+ C G A +++D + G P+
Sbjct: 497 EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECT 556
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G R + +A + ++ML GI P VT+N +L L R +A L L
Sbjct: 557 YNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMI 616
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
T G TY+I+++G ++ N E + + + D+ T+N + L
Sbjct: 617 TSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL 669
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 7/289 (2%)
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+KA R+ D + + + RP + YN LI G + D+A D M+ +KP+
Sbjct: 501 MKAQRLID-------LMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
T+N L+ G+CR+ + D A +F+EM G P VV++NT++ G F R+F E +
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
MI G ++S T I+++GL V +A ++ + + + ++ L +G
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDG 673
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A+ + + G +P V + E L E G+ +M K G P+S+ N
Sbjct: 674 RKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLN 733
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
L+ L G A K + T +L+S ++RE + +
Sbjct: 734 FLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAK 782
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 110 TTFLFIVRSLASSYRFSELHSV-LNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
T+ I+ L + RFSE + LN I++ I++ ++ +N K N
Sbjct: 590 VTYNTILHGLFKTRRFSEAKELYLNMITSGK----QWSIYT-------YNIILNGLSKNN 638
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+++ L F+++ D + + +N++I +K + A+ + + + + PDV T+
Sbjct: 639 CVDEALKMFQSLCSK-DLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTY 697
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
++ + G+F EM + GC PN + N L+R
Sbjct: 698 RLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVR 737
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +R LI +G +V YN +I+G K E D+AL + M + PDV T++ILI
Sbjct: 309 ALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIH 368
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GFC+ + L L EM+ P++VS+++L G +R D +++ ++ G ++
Sbjct: 369 GFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKY 428
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
IL+ G C +G + A +L+ + R + P ++ LV C G ALE
Sbjct: 429 DQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFF 488
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + + G LPS+ C +I+ R + EA LM +M +GI P+ T+N ++ LC
Sbjct: 489 NMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKE 548
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
++ A L L + + P + Y L+ G+ +++ ++ L ML G PD+ Y
Sbjct: 549 RKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAY 608
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 145/298 (48%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P S + L++GF K + AL F++ M+ + P + T N++I CR + + AL L
Sbjct: 463 PDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNL 522
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+ +G PN+ ++N +I ERK + + + M++ S V L+DG
Sbjct: 523 MNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAK 582
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA L + GV P Y L+ LC A + ++ + G P I+
Sbjct: 583 QSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKIS 642
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T++I G R+ +A L +ML+ G LP VT+ L++ C + R AD L
Sbjct: 643 YTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMK 702
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ PD +TY++L++ + R + ++NEM + G +PD TY ++ L A+K
Sbjct: 703 RKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLKAKK 759
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 138/284 (48%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
+ Y++LI GF + D A + MVR+ + PD F L+ GFC+ + AL F
Sbjct: 431 TAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNM 490
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E G P++ + N +I E + +E +N+ EM G + T +++ LC E +
Sbjct: 491 MLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERK 550
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+A EL +R VLP Y L++ + N+ AL + + K G P ++A T
Sbjct: 551 SERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTI 610
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI L + EA L +KM + G+ PD +++ ++ C +G A L +G
Sbjct: 611 LINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRG 670
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
P +TY LV GY + NR + L++EM +G PD+ TYN
Sbjct: 671 HLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYN 714
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 153/340 (45%), Gaps = 7/340 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR--EFD----K 208
R +F + +ANR FE M+ P+V Y +++N + K E D +
Sbjct: 215 RSCNFLLKCLAEANRREFLRSLFEEMKS-TGPPPNVFTYTIMMNFYCKGNFGEADIDTRQ 273
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A + M R+ P VVT++ I G CR + AL R + NV +N +I
Sbjct: 274 ATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIH 333
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + + DE + + EM G T IL+ G C +G V K L+ + + P
Sbjct: 334 GLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEP 393
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L LC + + I+L++ +L G A + LI+G A LM
Sbjct: 394 SLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLM 453
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E+M++ + PD F L+ C +G V+A + G+ P T ++++ + RE
Sbjct: 454 EEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCRE 513
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
R +E NL+NEM +G P+L TYN+ ++ L RKS R
Sbjct: 514 GRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 8/302 (2%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D SV ++++LI F + A+ + + + ++ + N L+ + +
Sbjct: 174 DAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFL 233
Query: 245 LGLFREMREKGCNPNVVSFNTLI----RGFFGERKFD--EGVNMAYEMIELGCEFSSVTC 298
LF EM+ G PNV ++ ++ +G FGE D + + EM G + VT
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+ GLC G V A + V L + Y ++ LC +G AL+V++E+
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT-V 417
G P V + LI G + + L+E+M + P V+++ L LC + +
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
D R L + G D Y IL+ G+ + L+ EM+ PD + + S +
Sbjct: 414 SLDIFRDLGAA-GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV 472
Query: 478 DG 479
G
Sbjct: 473 HG 474
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 155/331 (46%), Gaps = 5/331 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I+ + F A R +DG M RK+ P V ++ LI+ FVK + +A +
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT---PDVVAFSALIDCFVKEGKLREAEELH 340
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M++ + PD VT+ LI GFC+ + D A + M KGC PN+ +FN LI G+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+G+ + +M G +VT L+ G C G++ A EL + R V P Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G ALE+ +++ K + +I G+ K +A L +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD T+N ++ LC G +AD L G P+G TY+IL+ + E +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ E+ GF D +T +D LS+ R
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 150/307 (48%), Gaps = 2/307 (0%)
Query: 175 LAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LAF AM K+I P ++ LING +AL DRMV KP ++T N L+
Sbjct: 125 LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV 184
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C N K A+ L M E G PN V++ +++ + + + +M E +
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+V I++DGLC +G + A L + +G Y L+ C G ++
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ ++ K+ P V+A + LI+ + K EA L ++M++ GI PD+VT+ L++ C
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A+ + L +KG P+ T++IL++GY + N +G L +M G + D T
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 473 YNSYMDG 479
YN+ + G
Sbjct: 425 YNTLIQG 431
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 6/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K +++ F M I G + + IY LI GF +D
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEME--IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ PDVV F+ LI F + K A L +EM ++G +P+ V++ +LI GF E +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ +M M+ GC + T IL++G C + EL S RGV+ Y
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A E+ E+ + P +++ L++GL + +A + EK+ K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +N ++ +C+ + DA L KG+ PD TY+I++ G ++ E +
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 456 NLVNEMLDEGFIPDLATYNSYMD---GLSNARKSVR 488
L +M ++G P+ TYN + G +A KS +
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+++IN +CR+ A ++++ +PD VTF+ LI+G C + AL L M E
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P +++ N L+ G K + V + M+E G + + VT ++ +C G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL+ R + Y +++ LC +G+ A + +E+ KG +I TTLI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + + + L+ M+K I PD V F+ L++ G+ +A+ L +G+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
D +TY L+ G+ +EN+ + ++++ M+ +G P++ T+N ++G A
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E +RK+ + + + Y+++I+G K D A ++ M K D++ + LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC ++D L R+M ++ P+VV+F+ LI F E K E + EMI+ G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+VT L+DG C E ++ KA ++ +G P + L+ C LE+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ +G + + TLI+G L K A L ++M+ + PD V++ LL+ LCD
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A + ++ D Y+I++ G ++ + +L + +G PD+ T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 473 YNSYMDGL 480
YN + GL
Sbjct: 530 YNIMIGGL 537
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N R+++ L + M ++ +P++ N L+NG + A+ DRM
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEM-GHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +P+ VT+ ++ C++ + LA+ L R+M E+ + V ++ +I G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ EM G + + L+ G C GR +L+ D +R + P + L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ E+ ++G P + T+LI+G + + +A+ +++ M+ +G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ TFN L+ C D L S +G+ D +TY+ L+ G+ + + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ PD+ +Y +DGL +
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCD 469
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
DG+ VS L +G V +E D A+ + M R R +P ++ F+ L S R K++DL
Sbjct: 33 DGKGKVSYRERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLV 91
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L L ++M KG N+ + + +I RK + ++I+LG E +VT L++G
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC EGRV +A ELV G P LV LC G A+ ++D + + G P+
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +++ + + + A L+ KM + I D+V ++ +++ LC G +A L
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
KG D + Y L+ G+ R +G L+ +M+ PD+ +++ +D
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ + + + +L+ + + C P + R F+ +N + KA
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG---------PNI-RTFNILINGYCKA 400
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++DGL F M L YN LI GF + + + A + MV RV+PD+V+
Sbjct: 401 NLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ IL+ G C N + + AL +F ++ + ++ +N +I G K D+ ++ +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + T I++ GLC +G + +A L G P Y L+ GEG+A
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 348 IALEVVDELWKKG 360
+ ++++E+ + G
Sbjct: 580 KSAKLIEEIKRCG 592
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ IYN++I+G + D A + + VKPDV T+NI+I G C+ A LFR
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M E G +PN ++N LIR GE + + E+ G + T +++VD L ++G
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDG 610
Query: 310 RVLKA 314
R+ K+
Sbjct: 611 RLKKS 615
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 1/295 (0%)
Query: 186 GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
G P S+ +N+L++ F K + A +D + + ++P VV++N L++G+ R D
Sbjct: 119 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L M G P+V +++ LI G E K D+ + EM+ G + VT L+DG
Sbjct: 179 FRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDG 238
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C GRV A E+ + +LP Y L+ LC G+ A +++DE+ KG P
Sbjct: 239 HCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPD 298
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TTLI+G + A ++M++E I D V + L+ LC G++VDA+++
Sbjct: 299 KFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLR 358
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ GL PD TY ++++ + ++ +G L+ EM G P + TYN M+G
Sbjct: 359 EMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 175/372 (47%), Gaps = 9/372 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEMERIFHFA--VN 162
++ ++ L + SE S++ + + S +F+ + I+ F+ +
Sbjct: 3 SYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGLIT 62
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
A++++ + D + + R+ P + +L +K R F GFY+ ++
Sbjct: 63 AYLESGFLRDAIECYRLTREHKLWVPFDTCRKML-EHLMKLRYFKLVWGFYEEILECGYP 121
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ FNIL+ FC++ +A +F + + G P+VVS+NTL+ G+ DEG +
Sbjct: 122 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ G + T +L++GLC E ++ A EL + +G++P + L++ C
Sbjct: 182 KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 241
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G +A+E+ + + LP +I TLI GL + +A L+++M +G+ PD T
Sbjct: 242 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFT 301
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L++ C G A + R + + D + Y L+SG +E + + E ++ EML
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361
Query: 463 DEGFIPDLATYN 474
G PD+ TY
Sbjct: 362 SVGLKPDIGTYT 373
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K ++M+D F+ M L+ G P+ + LI+G K D A+ Y R
Sbjct: 197 YSVLINGLCKESKMDDANELFDEM--LVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKR 254
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PD++T+N LI G C+N A L EM KG P+ ++ TLI G E
Sbjct: 255 MLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD 314
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D MI+ V L+ GLC EG+ + A +++ + G+ P Y
Sbjct: 315 LDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTM 374
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
++ + C +G+ +++ E+ + G+ PSV+ L+ G
Sbjct: 375 IINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + C +G+ +A V D + K G PSV++ TL+ G RL E L ML G
Sbjct: 130 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANG 189
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD T++ L+ LC + DA+ L KGL P+G+T+ L+ G+ + R
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAM 249
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ ML + +PDL TYN+ + GL
Sbjct: 250 EIYKRMLSQSLLPDLITYNTLIYGL 274
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R RE + ++ R F
Sbjct: 51 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWG 110
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E++E G S IL+ C +G + A + ++ G+ P Y L+
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 230
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G + K+ +L++EM
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Query: 462 LDEGFIPDLATYNSYMDG 479
+G PD TY + +DG
Sbjct: 291 SMKGLKPDKFTYTTLIDG 308
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C ++E L +LR G E++L+ G FN L+ C G A +
Sbjct: 91 TCRKMLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 150
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ GL P ++Y+ L++GY R EG L + ML G PD+ TY+ ++GL K
Sbjct: 151 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESK 209
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
I +P+V ++ LI+ + K DKA +D M + V PD++ ++ILI G + + +
Sbjct: 301 IGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLED 360
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
L +KG +VV F++ + + + + M+ G + V+C IL+
Sbjct: 361 GQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIK 420
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C GR+L+AC L + + G P Y L+ C GN + +++ KK P
Sbjct: 421 GFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEP 480
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I + LI GL + +A + + G+ P+ T N LL+ C + V A ++
Sbjct: 481 DTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVY 540
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L + D +TY IL+ G + R E L +ML + F PD+ TY + +DGL
Sbjct: 541 YLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKL 600
Query: 484 RKS 486
+KS
Sbjct: 601 KKS 603
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 1/319 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F + R+ + F + KL PS+ Y+ LI GF K Y+ M++ R
Sbjct: 419 IKGFCQNGRILEACGLFVQILKL-GFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR 477
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD + +++LI+G C+ AL F + +G +PNV + NTL+ F + +
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ Y M L + +VT IL+ G GRV +A L ++ P Y L++ L
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + L + D + K P + LI R A GL +++ G PD
Sbjct: 598 CKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
TFN ++ C+ R DA +L +++ L P+ +T+ IL+ + RE R + + ++
Sbjct: 658 FTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSK 717
Query: 461 MLDEGFIPDLATYNSYMDG 479
ML+EG P+L TY+ + G
Sbjct: 718 MLEEGPEPNLVTYSCLIHG 736
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 37/302 (12%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
R+++ L+ F M K D +P V Y LI+G K ++ L +D M ++ V PD+ +
Sbjct: 567 RVDEALMLFFQMLKK-DFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIY 625
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N+LI+ R + ALGLF + E+G P+V +FNT+I + ++ D+ V + +M
Sbjct: 626 NVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTS 685
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+++T IL+D C EGR+ A ++ FS+
Sbjct: 686 EQLRPNAITFTILIDAFCREGRMDDA---MLMFSK------------------------- 717
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS-GLMEKMLKEGILPDSVTFNCLL 407
+ ++G P+++ + LI G + + +E+ L +ML+ I P+ V+++ L+
Sbjct: 718 -------MLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILI 770
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC G +A A K L PD + Y IL+ GY + R E L + ML
Sbjct: 771 DGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLT 830
Query: 468 PD 469
PD
Sbjct: 831 PD 832
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 3/319 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A+ K ++ + F+ M +G P + +Y++LI+G K +
Sbjct: 310 FSTLIDAYCKEGNLDKAFVLFDVMAG--NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLV 367
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +K DVV F+ + + + + +++ M +G +PNVVS + LI+GF +
Sbjct: 368 ALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + ++++LG E S +T L+ G C G + L D ++ P Y
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC +G G AL + +G P+V TL++ RL+ V A + M
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN 547
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I D+VT+ L++ GR +A L K PD +TY L+ G + + G
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGL 607
Query: 456 NLVNEMLDEGFIPDLATYN 474
+ + M PD+A YN
Sbjct: 608 CIFDFMCKNAVAPDIAIYN 626
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 202/476 (42%), Gaps = 23/476 (4%)
Query: 14 HNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHT-HLLRFLKTHLLTPTNNQITPS 72
HN+ P P P L S+ + V ++L P + ++ ++P + PS
Sbjct: 62 HNQQNPKPLNP--ILLSKLQLYHVPDVIISLQPKPFSAIRFFEWAESFFISPLS---APS 116
Query: 73 --SLLHFLKSKLHHHPQFTHYDFHIFAWAS---TIDSFRH-----DHTTFLFIVRSLASS 122
+LLH L +D I + + T+D+FR D T + L S
Sbjct: 117 FCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAFRDGFCDLDSTNHSVVYGFLIES 176
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
Y + I + C GIF P + + + + + ++ + + + +
Sbjct: 177 YCRKGMFDKSVDIFMHVCV---KGIFVSPN---VVYLLLGSLIDSHCVEVIVDKYGELCS 230
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+ +P S+Y ++N F+ E + L F+ +V+ D++T N ++ G
Sbjct: 231 AMREQP-FSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIG 289
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
+A F + G PNVV+F+TLI + E D+ + M G + IL+
Sbjct: 290 VADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILI 349
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGL GR+ L++ +G+ + ++ G+ G +++ + +G
Sbjct: 350 DGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGIS 409
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+V++C+ LI+G + + +EA GL ++LK G P +T++ L+ C G D L
Sbjct: 410 PNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYL 469
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
K +PD + Y +L++G ++ + + ++ G P++ T N+ +D
Sbjct: 470 YEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 70/325 (21%)
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVS--------------------- 262
V + LI +CR FD ++ +F + KG +PNVV
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227
Query: 263 ------------FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
+ ++ F + + + G+ +++ G +TC ++ G+ +
Sbjct: 228 LCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQND 287
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A + R G P + L++ C EGN A + D + G P +I +
Sbjct: 288 IGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSI 347
Query: 371 LIEGLRR--------------LRKGVEAS---------------------GLMEKMLKEG 395
LI+GL + L KG++ + ++ML EG
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG 407
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P+ V+ + L++ C GR ++A L + G +P +TY L++G+ + ++G
Sbjct: 408 ISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGF 467
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L +M+ + PD Y+ ++GL
Sbjct: 468 YLYEDMIKKRCEPDTIVYSVLINGL 492
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+ P++ YN+LIN + + R D L + R++R + PDV ++N LI GF + + D A
Sbjct: 184 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 243
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
LF +M E+G PNVV++++LI G ++ D+ + +M+ G +++T L+ G
Sbjct: 244 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 303
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G ++ + + S ++P + + LC G A ++ D + KG P
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
VI+ L+ G L M+ EG++PD FN L+ +G +D L
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG-MMDKSLLMF 422
Query: 425 LASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TK G++PD +T+ ++S + R R + N M+D G PD A Y+ + G N
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Query: 484 RKSVR 488
R V+
Sbjct: 483 RDLVK 487
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A K R+ + F++M L +P V Y L++G+ ++ MV +
Sbjct: 336 MTALCKHGRIKEARDIFDSM-VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG 394
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD FN LI+ + R D +L +F +M ++G NP++++F+T+I F + D+ +
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 454
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF-GLVEK 339
MI+ G + L+ G CN ++KA EL+ D +G+ P +F ++
Sbjct: 455 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 514
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC EG +VVD + G P++I +L++G + EA GL++ M G+ PD
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L++ C GR DA L K + ++Y+I++ G + R + + +
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 634
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM++ G + TY + + GL
Sbjct: 635 EMIESGMAVSIHTYATVLGGL 655
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 37/363 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ +NA+ + M+ LL FE M K P + ++ +I+ F + D A+ ++
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQ-GVNPDIITFSTVISAFCRLGRLDDAMEKFNH 459
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC------------------- 256
M+ V PD ++ LI G C + A L +M KG
Sbjct: 460 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 519
Query: 257 -----------------NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
PN+++FN+L+ G+ E V + M +G E T
Sbjct: 520 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 579
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
LVDG C GR+ A L D + V Y ++ L +A E+ E+ +
Sbjct: 580 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 639
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G S+ T++ GL R EA+ L+EK+ + D +TFN ++ + VGR +A
Sbjct: 640 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 699
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L ST GL P +TY ++++ +E ++ +NL + M PD N +
Sbjct: 700 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 759
Query: 480 LSN 482
L N
Sbjct: 760 LLN 762
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 1/310 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P + F +N K R+ +G + + RP++ +N L++G+ +A+
Sbjct: 502 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH-TGQRPNLITFNSLVDGYCLVGNMKEAV 560
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
G D M V+PD+ T+N L+ G+C++ + D AL LFR+M K VS+N ++ G
Sbjct: 561 GLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGL 620
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F R+ M +EMIE G S T ++ GLC +A L+ V
Sbjct: 621 FQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDI 680
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ ++ + G A E+ + G +P+++ +I L + +A L
Sbjct: 681 LTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSS 740
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K PDS N ++ L + G A KG+ P+ T +L+ ++ +
Sbjct: 741 MEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 800
Query: 451 RKEGENLVNE 460
+E L+ E
Sbjct: 801 YREYIKLLPE 810
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
RLL + GL PD +Y+ L+ G+++E + +L +M ++G +P++ TY+S ++GL
Sbjct: 214 RLLRT--GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCK 271
Query: 483 ARKSVRQTR 491
++ + R
Sbjct: 272 TKEMDKAER 280
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 171/378 (45%), Gaps = 9/378 (2%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER--------I 156
FRH ++ ++ L + E S++ + + S +F+ + +
Sbjct: 1 FRHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYV 60
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + A++++ + D + + R+ P + VL +K + F GFY +
Sbjct: 61 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVL-EHLMKLKYFKLVWGFYKEI 119
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + FNIL+ FC+ + +A +F + + G P+VVSFNTL+ G+
Sbjct: 120 LECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDL 179
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DEG + M G E T +L++GLC E ++ A EL + +G++P + L
Sbjct: 180 DEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTL 239
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C G +A+E+ ++ + +I TLI GL + +A L+++M +G+
Sbjct: 240 IDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGL 299
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD +T+ L++ C G A R + + D + Y L+SG +E R + E
Sbjct: 300 KPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEK 359
Query: 457 LVNEMLDEGFIPDLATYN 474
++ EML G PD TY
Sbjct: 360 MLREMLSVGLKPDTGTYT 377
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
S+ +N+L++ F K E A +D + + ++P VV+FN L++G+ R D L
Sbjct: 126 ASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 185
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G P+V +++ LI G E K D + EM++ G + VT L+DG C
Sbjct: 186 KSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCK 245
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV A E+ + + Y L+ LC +G+ A ++DE+ KG P I
Sbjct: 246 NGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKIT 305
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G + A ++M++E I D V + L+ LC GR+VDA+++
Sbjct: 306 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREML 365
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ GL PD TY ++++ + ++ G L+ EM +G +P + T
Sbjct: 366 SVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N +++ +++G AM P V Y+VLING K + D A +D M
Sbjct: 166 FNTLMNGYIRLGDLDEGFRLKSAMHA-SGVEPDVYTYSVLINGLCKESKIDGANELFDEM 224
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFR--------------------------- 249
+ + P+ VTF LI G C+N + DLA+ +++
Sbjct: 225 LDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDL 284
Query: 250 --------EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
EMR KG P+ +++ TLI G E + MI+ V L
Sbjct: 285 KQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTL 344
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GLC EGR + A +++ + G+ P Y ++ + C +G+ +++ E+ + G+
Sbjct: 345 ISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 404
Query: 362 LPSVIA 367
+PSV+
Sbjct: 405 VPSVVT 410
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 6/262 (2%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFD 277
++ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 54 LRSDIYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCKKVLEHLMKLKYFK 110
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E++E G S IL+ C EG + A + ++ G+ P + L+
Sbjct: 111 LVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLM 170
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
G+ + + G P V + LI GL + K A+ L ++ML +G++
Sbjct: 171 NGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLV 230
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF L++ C GR A + ++ L D +TY+ L+ G ++ K+ +NL
Sbjct: 231 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNL 290
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
++EM +G PD TY + +DG
Sbjct: 291 IDEMRMKGLKPDKITYTTLIDG 312
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C EG +A V D + K G PSV++ TL+ G RL E
Sbjct: 125 PASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 184
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC + A+ L KGL P+G+T+ L+ G+
Sbjct: 185 LKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHC 244
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + DL TYN+ + GL
Sbjct: 245 KNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 278
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 200/474 (42%), Gaps = 53/474 (11%)
Query: 20 PPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPT----------NNQI 69
PPPA S + + P T T L KT TP N+
Sbjct: 20 PPPADSAAIAKLILSSPNT--------THQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGP 71
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
HFL + HH ++ H D F A I + H H T ++ + S
Sbjct: 72 KALQFFHFLDN---HHREYVH-DASSFDLAIDIAARLHLHPTVWSLIHRMRS-------- 119
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
+ P P + F + A + + + F M +
Sbjct: 120 -----LRIGPSP-------------KTFAIVAERYASAGKPDKAVKLFLNMHEH-GCFQD 160
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
++ +N +++ K + +KA + R +R R D VT+N++++G+C K+ AL + +
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM E+G NPN+ ++NT+++GFF + EM + CE VT +V G G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+ +A + + R GVLP Y +++ LC + N A+ + +E+ ++G P+V
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI GL + LM++M EG P+ T+N ++ + A L +
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 430 GLDPDGMTYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+SG R ++ L+ EM++ GFIP T+N ++GL
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGL 453
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 116/277 (41%), Gaps = 39/277 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F +A ++ F M+K D V Y +++GF E +A +D M
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R+ V P V T+N +I C+ + A+ +F EM +G PNV ++N LIRG F +F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
G + M GCE + T +++ V KA GL
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA-------------------LGL 392
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKMLK 393
EK+ G G+ LP++ LI G+ +R V A L+ +M++
Sbjct: 393 FEKM-GSGDC---------------LPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVE 436
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
G +P TFN +L L G A + L S G
Sbjct: 437 RGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 43/329 (13%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V YN LIN F K +KA ++ M R V +VVTF+ + FC+ A+ LF
Sbjct: 270 VVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFA 329
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+MR +G PN ++ +L+ G + D+ + + EM+ G + VT ++VDGLC EG
Sbjct: 330 QMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEG 389
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-------- 361
+V +A ++ R GV + Y L+ N+ AL++++++ KG
Sbjct: 390 KVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYG 449
Query: 362 ---------------------------LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
P+ + TT+++ L + K EA L+ K+L
Sbjct: 450 TLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDS 509
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
G P+ VT+ L++ LC G +A +++R L GLDP+ Y L+ G+ +
Sbjct: 510 GFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL----GLDPNVQAYTALIDGFCKIGS 565
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ +L+NEM+D+G D Y S +DG
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLIDG 594
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 10/303 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N++I+ K E +A + RM PDVVT+N LI G+ + + L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMR+ GC +VV++N LI F + ++ + EM G + VT VD C
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG V +A +L RG++P +F Y LV+ C G A+ ++DE+ +G +P+V+
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL-- 425
T +++GL + K EA ++ M + G+ + + + L+ G ++ + R L
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIH-----GHFMNNNSERALDL 432
Query: 426 ---ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG++ D Y L+ G ++ + E ++L+++M G P+ Y + MD L
Sbjct: 433 LNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFK 492
Query: 483 ARK 485
A K
Sbjct: 493 AGK 495
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K + + F M K + P V YN LI+G+ KC + ++ M
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRM-KAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ DVVT+N LI+ F + + + A F EM+ +G NVV+F+T + F E
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLV 321
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + +M G + T LVDG C GR+ A L+ + +G++P Y +
Sbjct: 322 QEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 381
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC EG A V+ + + G + + TTLI G A L+ +M +G+
Sbjct: 382 VDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D + L+ LC + +A L + GL P+ + Y ++ + + E
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L++++LD GF P++ TY + +DGL A
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKA 528
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 5/316 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V+ KA R++D ++ + M + L+ P+V Y V+++G K + +A M R
Sbjct: 347 VDGTCKAGRLDDAIVLLDEMVHQGLV---PNVVTYTVMVDGLCKEGKVAEADNVLSLMER 403
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
VK + + + LI G N + AL L +M+ KG +V + TLI G ++K DE
Sbjct: 404 GGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDE 463
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ ++M G ++V ++D L G+ +A L+ G P Y L++
Sbjct: 464 AKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALID 523
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G+ A+ +++ + G P+V A T LI+G ++ +A LM +M+ +G+
Sbjct: 524 GLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSL 583
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D V + L++ DA L+ GL D Y +SG+ N +E ++
Sbjct: 584 DKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVL 643
Query: 459 NEMLDEGFIPDLATYN 474
+EM+ G PD YN
Sbjct: 644 SEMIGTGITPDKTVYN 659
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 146/327 (44%), Gaps = 3/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
F V+AF K + + + F MR + G P+ Y L++G K D A+ D
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMR--VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 365
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + P+VVT+ +++ G C+ K A + M G N + + TLI G F
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNN 425
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ +++ +M G E L+ GLC + +V +A L+ + G+ P Y
Sbjct: 426 SERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTT 485
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ L G A+ ++ ++ G P+V+ LI+GL + EA KM + G
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELG 545
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P+ + L++ C +G A L KG+ D + Y L+ GY ++ ++
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L +M++ G DL Y ++ G N
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCN 632
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+Y LI+G ++AL ++M ++ DV + LI G C+++K D A L +M
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G PN V + T++ F K E V + +++++ G + + VT L+DGLC G +
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A G+ P Y L++ C G+ A+ +++E+ KG + T+L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+G + +A L KM++ G+ D + C + C++ +A + G+
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEM 461
PD Y+ L+ Y + +E +L NEM
Sbjct: 652 TPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ IY +++ K + +A+ +++ +P+VVT+ LI G C+ A+
Sbjct: 477 RPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAIS 536
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F +MRE G +PNV ++ LI GF ++ +++ EMI+ G V L+DG
Sbjct: 537 HFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYM 596
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ + D F L K+ +G+ L+ +
Sbjct: 597 KQANLQ-------------------DAFALKTKMI---ESGLQLD-------------LY 621
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
T I G + EA G++ +M+ GI PD +NCL+ +G +A L+
Sbjct: 622 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQ 678
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 10/321 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + ++ R+ D L +M P YN ++ G R+++ A MVR+
Sbjct: 187 INGYCRSGRLADALALIASMPVA----PDTYTYNTVLMGLCGARQWEDAEALMAEMVRNH 242
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VTF I FC+N D A+ L M + GC P+VV ++TL+ GF + + D+ +
Sbjct: 243 CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAI 302
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M+ C+ +++ + GLC R +L+++ R+ LP + + L L
Sbjct: 303 ELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCL 359
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A+EV++++ K G P + TLI + +A L+ M PD
Sbjct: 360 CQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDV 416
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++FN L+ LC R DA+ L + + MT++IL+ + R + +
Sbjct: 417 ISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQ 476
Query: 461 MLDEGFIPDLATYNSYMDGLS 481
M G PD+ TY+S ++GLS
Sbjct: 477 MPKYGCTPDIVTYSSLINGLS 497
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 12/330 (3%)
Query: 157 FHFAVNAFVKANRMND-GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ A+ A R D G L E +RK D P+ + +++L + + D A+ ++
Sbjct: 317 YNAALKGLCIAQRWEDVGQLIVEMVRK--DCLPNEATFSMLTSCLCQNGLVDCAMEVLEQ 374
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + +PD V +N LI F + D AL L M C+P+V+SFN ++G +
Sbjct: 375 MHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAER 431
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+D+ + +M+ C +T IL+D LC GRV A E+ + G P Y
Sbjct: 432 WDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSS 491
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L +G A+E+ + K P + +++GL R + +A L+ M ++
Sbjct: 492 LINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISNMARKD 548
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ +TFN L+ LC G A + G PD TY+ L++G++ + R +
Sbjct: 549 CPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDAR 608
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++ M PD +YNS + GL A +
Sbjct: 609 RLLSTM---SCKPDAVSYNSALKGLCRAER 635
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 9/262 (3%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+VVT+ LI+G+CR+ + AL L M P+ ++NT++ G G R++++ +
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMPVA---PDTYTYNTVLMGLCGARQWEDAEALM 235
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
EM+ C + VT + C G + +A +L+ + G P Y LV +
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A+E+++ + K P+ I ++GL ++ + L+ +M+++ LP+ TF
Sbjct: 296 GRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
+ L LC G A + G PD + Y+ L+ ++ + R + L+N M
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM-- 410
Query: 464 EGFIPDLATYNSYMDGLSNARK 485
PD+ ++N+ + GL A +
Sbjct: 411 -PCSPDVISFNAALKGLCRAER 431
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK------------LIDG----------- 186
CP +E F+ +++ + R+N+ + FE M K LI+G
Sbjct: 447 CPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAI 506
Query: 187 --------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
+P + YN ++ G + ++ A M R P+ +TFNILI+ C+
Sbjct: 507 ELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQK 566
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
D A+ +F +M + G P++ ++N LI GF + + D+ + M C+ +V+
Sbjct: 567 GLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSY 623
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ GLC R +A E+V + R P + +
Sbjct: 624 NSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
SN CP E F+ +N+ + ++ + FE M K P + YN LINGF +
Sbjct: 542 SNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKY-GSTPDIFTYNALINGFSE 600
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
D A M KPD V++N + G CR +++ A + EM C PN V+
Sbjct: 601 QGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVT 657
Query: 263 FNTLIRGF 270
F R F
Sbjct: 658 FKYANRLF 665
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 159/323 (49%), Gaps = 16/323 (4%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL--------------GFYDRMVRDR-- 220
FE M + +D + S +YN ++N V KA G ++ R +
Sbjct: 260 FEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAM 319
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+ TF+I+I+G + DLA+GLFR+M GC P+++ +N LI G + E
Sbjct: 320 VPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESC 379
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM E G E +S T + LC + A L+ G +P LV++L
Sbjct: 380 GLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKEL 439
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A + + ++ ++G P ++A + ++GL ++++ +A L + + +G PD
Sbjct: 440 CKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDV 499
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+ +N L++ LC R +A L KGL P +TY+ L+ G + + +E ++
Sbjct: 500 IAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSM 559
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M+++ P++ TY++ ++GL NA
Sbjct: 560 MIEKEREPNVITYSTLINGLCNA 582
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 10/334 (2%)
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR----PSVSIYNVLINGFVKCREFDK 208
+ + +H + A N + DG + KL G+ P+ + ++++ING +K + D
Sbjct: 289 VHKAYHL-LQAITIGNCIGDGEIG-----KLFRGKAMVPPNSTTFSIVINGLIKTGDLDL 342
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+G + M R KPD++ +N LI G C + + + GL +EM E G P + N +
Sbjct: 343 AVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFG 402
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+++ +M G LV LC G+ ++AC+ ++D + G P
Sbjct: 403 CLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQP 462
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y ++ L AL++ ++ +G P VIA LI+GL + ++ EA L+
Sbjct: 463 DIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLL 522
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+M ++G++P +VT+N L++ LC +A + K +P+ +TY L++G
Sbjct: 523 HEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNA 582
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
R + L NEM +G P Y +++ GLSN
Sbjct: 583 GRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSN 616
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 163/383 (42%), Gaps = 54/383 (14%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E +F V AF K +++ E M + + R + + LI GFVK DKAL +
Sbjct: 135 EYVFSILVLAFSKWGKVDKACELIETMEEK-NVRLNKKTFCSLIYGFVKESRVDKALHLF 193
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
D+M + PD+ ++++I G C NK AL L+ EM+ P+V LI F E
Sbjct: 194 DKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKE 253
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID------------- 320
+ +E ++ + S++ +++ L + G V KA L+
Sbjct: 254 EELTCFFEEMHE--DMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIG 311
Query: 321 --FSRRGVLPKDFDYFGLV-EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
F + ++P + F +V L G+ +A+ + ++ + G P ++ LI+GL
Sbjct: 312 KLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCT 371
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNC-------------------------------- 405
+ E+ GL+++M + GI P S T NC
Sbjct: 372 SNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKH 431
Query: 406 ---LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
L+++LC G+ V+A + + + +G PD + Y + G + + L ++
Sbjct: 432 STSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDIC 491
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
+G+ PD+ YN + GL ++
Sbjct: 492 AQGYCPDVIAYNILIKGLCKTQR 514
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 178 EAMRKLIDG-----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
EA + L+D +P + Y+ ++G +K +E D+AL + + PDV+ +NILI
Sbjct: 447 EACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILI 506
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ ++ A L EM EKG P+ V++NTLI G +E + MIE E
Sbjct: 507 KGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKERE 566
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ +T L++GLCN GR A L + R+G P Y + L G AL
Sbjct: 567 PNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVY 626
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+ E+ ++ P L+ A ++++M+ +G PD
Sbjct: 627 LREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPD 673
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 19/297 (6%)
Query: 115 IVRSLASSYRFSELHSVLNFISAN---PCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
++ L +S R E +L + + P +N+ IF C + + ++
Sbjct: 365 LIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGC-------------LCRRHDIS 411
Query: 172 DGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
L + MR I G P + L+ K + +A F M + +PD+V ++
Sbjct: 412 GALHLLKKMR--IHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSA 469
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+ G + ++ D AL LF+++ +G P+V+++N LI+G ++ E N+ +EM E G
Sbjct: 470 CLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKG 529
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
S+VT L+DGLC + +A + + P Y L+ LC G AL
Sbjct: 530 LVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDAL 589
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ +E+ +KG PS IA I GL + EA + +M + + PD+ + LL
Sbjct: 590 VLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLL 646
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN+LI G K + +A M + P VT+N LI G C+ + A+
Sbjct: 497 PDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLF 556
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M EK PNV++++TLI G + D+ + + EM GC SS+ + GL N
Sbjct: 557 LSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSN 616
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
GR +A + + R + P + Y GL+ + N +A E++ E+ KG P +
Sbjct: 617 CGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDL 674
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 15/284 (5%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
EFDKAL ++ + DR D F+IL+ F + K D A L M EK N +F
Sbjct: 116 EFDKALDVFNE-IHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFC 174
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI GF E + D+ +++ +M + G ++++ GLC V KA L +
Sbjct: 175 SLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGF 234
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDE--------LWKKGNLPSVIACTTLIEGLR 376
+ P L+ E E + E L L S++ ++ +
Sbjct: 235 KIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYH 294
Query: 377 RLRK----GVEASGLMEKML--KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ G + K+ K + P+S TF+ ++ L G A L + G
Sbjct: 295 LLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIG 354
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
PD + Y+ L+ G NR +E L+ EM + G P T N
Sbjct: 355 CKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNN 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
D T ++ +C +FD AL +F E+ ++G V F+ L+ F K D+ +
Sbjct: 100 DKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELI 158
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
M E + T L+ G E RV KA L + G P Y ++ LC
Sbjct: 159 ETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVN 218
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT- 402
+ AL + E+ P V T LI K E + E+M E + P + T
Sbjct: 219 KDVKKALCLYSEMKGFKIQPDVKIVTKLISS---FSKEEELTCFFEEM-HEDMDPKASTL 274
Query: 403 -FNCLLEDLCDVGRTVDADRL----------------RLLASTKGLDPDGMTYHILVSGY 445
+N +L L D G A L +L + P+ T+ I+++G
Sbjct: 275 LYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGL 334
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L +M G PDL YN+ +DGL + +
Sbjct: 335 IKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNR 374
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 206/467 (44%), Gaps = 54/467 (11%)
Query: 23 APSIPLPSRPETPPVTL--PSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKS 80
A I S P+ TL P++ TP +T L R P +L F +
Sbjct: 42 ATLILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWND----------GPKALQFF--N 89
Query: 81 KLHHHPQFTH----YDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFIS 136
L HHP ++H YD I A DS +RSL R + L
Sbjct: 90 LLSHHPSYSHHPSSYDHAIDISARLRDSPS---------LRSLVYRMRSARL-------- 132
Query: 137 ANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVL 196
P P + F + A + + + F +M + + +N +
Sbjct: 133 -GPTP-------------KTFAIIAERYASAGKPHRAVKVFLSMHQF-GCFQDLQSFNTI 177
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
++ K + + A + ++ + + + D V++N++++G+C K+ + AL + +EM ++G
Sbjct: 178 LDVLCKSKRVEMAYNLF-KVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGL 236
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
PN+ S+NT+++G+F + +E + EM + CE +T ++ G G + +A +
Sbjct: 237 TPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARK 296
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+ ++GVLP Y ++ LC + N A+ + +E+ KG +P+ I +I GL
Sbjct: 297 VFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLC 356
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ A M +M +G P+ T+N ++ CD G A L ++ P+
Sbjct: 357 HRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLD 416
Query: 437 TYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+IL+S + + NL+ EM+D GF+P T+N ++GL
Sbjct: 417 TYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGL 463
>gi|11079485|gb|AAG29197.1|AC078898_7 hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 19/333 (5%)
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFS---CPEME 154
W S I +F+H+ T++ +V L S E+ + + C D +F C M
Sbjct: 49 WISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKI-TILMIKSCNSVRDALFVVDFCRTMR 107
Query: 155 RIFHFAVNAFVKANRMNDGLLAF------EAMRKLIDG------RPSVSIYNVLINGFVK 202
+ F + + N+ L + E M++L P + +N L+NG+ K
Sbjct: 108 KGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+A + +++ PD T+ I+G CR K+ D A +F+EM + GC+ N VS
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+ LI G F +K DE +++ +M + C + T +L+D LC G+ +A L S
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G+ P D Y L++ C A +++ + + G +P+VI LI+G +K V
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF--CKKNV 345
Query: 383 -EASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+A GL+ KML++ ++PD +T+N L+ C G
Sbjct: 346 HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 40/278 (14%)
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
CR K F ++ ++ P +N L+S R + L+ EM E +P++ +
Sbjct: 103 CRTMRKGDSF---EIKYKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYT 157
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FNTL+ G+ C G V++A + V
Sbjct: 158 FNTLVNGY-----------------------------------CKLGYVVEAKQYVTWLI 182
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ G P F Y + C A +V E+ + G + ++ T LI GL +K
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA L+ KM + P+ T+ L++ LC G+ +A L S G+ PD Y +L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + E L+ ML+ G +P++ TYN+ + G
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKK--GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
V C G + E+ +L K NL S +A L+E ++RL +ML+
Sbjct: 98 FVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRL---------YTEMLE 148
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ + PD TFN L+ C +G V+A + G DPD TY ++G+ R
Sbjct: 149 DLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDA 208
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ EM G + +Y + GL A+K
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 155/326 (47%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R ++ +A ++++ + M +L P V YN L++ K R AL +
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLE 373
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M VKP +VT NI++ C+ K + ALG ++ E+G P+V+++NTLI +
Sbjct: 374 EMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG 433
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + EM+ G + + T ++ LC R A EL+ +RG +P + Y
Sbjct: 434 NVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYG 493
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ E N AL + D++ ++ +PS+ TLI+GL R+ + EA + + +++
Sbjct: 494 TVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEK 553
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++PD T+N ++ C G +A R PD +T + L++G + +
Sbjct: 554 GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKA 613
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L +++G D+ TYN+ + +
Sbjct: 614 LKLFESWVEKGKKVDVITYNTLIQSM 639
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 11/333 (3%)
Query: 142 CSNDGIFSCPEMER--------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSI 192
CS+D + EM + V + K ++ + L E + + +G P V
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE--EGLAPDVIT 421
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+ + K KA D MV +K D T N ++ C+ K+++ A L
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ VS+ T++ +F E + + + +MIE S T L+ GLC R+
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + + +F +G++P + Y ++ C EG+ A +++ + P V+ C TL+
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL K +A L E +++G D +T+N L++ +C VG A KGL
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
PD TY++++S + R +E N+++++ D G
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 145/324 (44%), Gaps = 6/324 (1%)
Query: 160 AVNAFVKANRMNDGLL---AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
A NA + A + L + + R LI+ R P+ +N+L++ AL
Sbjct: 173 AANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLS 232
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + PD VT+N L++ CR A L M+ G P ++NTL+ F
Sbjct: 233 TMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLG 292
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG-VLPKDFDY 333
+ + M G E T +L GLC G+V +A L + R G LP Y
Sbjct: 293 WIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTY 352
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV+ + AL +++E+ KG P+++ +++ L + K EA G +EK+ +
Sbjct: 353 NTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE 412
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
EG+ PD +T+N L++ C G A L KGL D T + ++ + R ++
Sbjct: 413 EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYED 472
Query: 454 GENLVNEMLDEGFIPDLATYNSYM 477
E L++ GF+PD +Y + M
Sbjct: 473 AEELLHSPPQRGFVPDEVSYGTVM 496
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 11/308 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y ++ + K + AL +D+M+ ++ P + T+N LI G CR ++ A+
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
E EKG P+ ++N +I + E + +M+E + VTC L++GLC
Sbjct: 547 LNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ KA +L + +G Y L++ +C G+ AL D++ KG P
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL-----EDLCDVGRTVDADRL 422
++ L + EA ++ K+ G L S +F C L D DV +
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSGKL--SQSFACPLLKPSSADEADVKE--HEGKP 722
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+S K D TY ++G + KE + +++EM+ +G D +TY + M+GL
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782
Query: 483 ARKSVRQT 490
+K RQT
Sbjct: 783 RQK--RQT 788
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 5/330 (1%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF--DKALGFYDRMV 217
A++A+ + + ++R+ RPS+ N +++ + +L + ++
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
R+ P+ TFN+L+ C AL M+ G +P+ V++NTL+ +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + M G + T LV G + +A ++V + G P Y L
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA 320
Query: 338 EKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
LC G A + DE+ + G LP V+ TL++ + R +A L+E+M +G+
Sbjct: 321 MGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P VT N +++ LC G+ +A +L +A +GL PD +TY+ L+ Y + +
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAE-EGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM+ +G D T N+ + L ++
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKR 469
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 8/302 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKF--DLA 244
P+ + + ++ + + R A + R R V+P + N ++S R+ +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +FR + E +PN +FN L+ + + + M G +VT L++
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +G + +A L+ R G+ P Y LV G A +VV+ + G P
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGI-LPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ L GL + K EA L ++M + G LPD VT+N L+ D C R +D LR
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLV-DACFKWR-CSSDALR 370
Query: 424 LLAST--KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
LL KG+ P +T++I+V +E + +E + ++ +EG PD+ TYN+ +D
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 482 NA 483
A
Sbjct: 431 KA 432
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 7/237 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALG 211
E ++ ++A+ K + + AF K+++ +P V N L+NG + DKAL
Sbjct: 559 ETTYNIIIHAYCKEGDLEN---AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALK 615
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
++ V K DV+T+N LI C+ D AL F +M KG P+ ++N ++
Sbjct: 616 LFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALS 675
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK-ACELVIDFSRRGVLPKD 330
+ +E NM +++ + G S C +L +E V + + + S +
Sbjct: 676 EAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL-RRLRKGVEASG 386
Y + LC G A V+DE+ +KG TL+EGL +R ++ A+G
Sbjct: 736 ETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQTHAAG 792
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 145/300 (48%), Gaps = 4/300 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN I+G K + DK L + M R + PDVVTF +ISG C+ + D A +
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFD--EGVNMAYEMIELGCEFSSVTCEILVDGL 305
F+ M E+GC P+ ++++ ++ + D + V + ++ GC T + L
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL-PS 364
C G+ A +++ G LP Y +++ LC GN A ++ ++ G P
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGI-LPDSVTFNCLLEDLCDVGRTVDADRLR 423
VI TLI G + + +A L+ +M + I +PD VT+N L++ G A L
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLL 424
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G P+ +TY L++GY + +E E+L +EM +G PD+ TYN+ + S A
Sbjct: 425 QEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKA 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 11/326 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ KANR++D F+ M R + P Y+++++ + D +
Sbjct: 225 FCSIISGLCKANRIDDAFQVFKGMLERGCV---PDSLTYSIMLDNLSRANRLDTVDEVLE 281
Query: 215 RM--VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
M ++ +V T N I CR+ KF LA + M E G PN++S+N +I G
Sbjct: 282 HMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 341
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTC-EILVDGLCNEGRVLKACELVIDFSRRGV-LPKD 330
D+ ++ +M++ GC V L+ G C GR+ +A +L+I+ + + +P
Sbjct: 342 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDV 401
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L++ G+ A ++ E+ G P+V+ LI G + EA L ++
Sbjct: 402 VTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDE 461
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRE 448
M +G PD +T+N +L G A+ + +L T PD +TY IL+ GY R
Sbjct: 462 MSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRA 521
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYN 474
++G L+ EM G+ D TYN
Sbjct: 522 EDTEQGLTLLQEMTARGWSCDSYTYN 547
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 14/307 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
SV Y LI+G K + D A +M P+VVT+ LI G C+ ++ A+
Sbjct: 8 ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ M GC P++V++N+LI G + D+ + E++ G + +T LV C
Sbjct: 68 VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCR 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDY----FGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
R+ +A L+ + RG + Y FG E C ++ DE+ + G +P
Sbjct: 128 RRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARC--QSSRYECRDGDEMIESGRIP 185
Query: 364 SVIACTTLIEGL---RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
V+ T I GL +L KG+E ++E+M + GI PD VTF ++ LC R DA
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLE---MLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAF 242
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM--LDEGFIPDLATYNSYMD 478
++ +G PD +TY I++ +R NR + ++ M + G + ++ T+N+++
Sbjct: 243 QVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIG 302
Query: 479 GLSNARK 485
L + K
Sbjct: 303 ALCRSGK 309
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 8/308 (2%)
Query: 180 MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
++K+ D P+V Y LI+G K R A+ RM+R +PD+VT+N LI G C
Sbjct: 33 LQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCM 92
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ D A + +E+ G PN ++++TL+ R+ D+ + EMI G + V
Sbjct: 93 ANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVV 152
Query: 298 CEILVDGLCNEGRVLKA---CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ G C E R + C + G +P Y + LC G LE+++
Sbjct: 153 YIDCIFGFC-EARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLE 211
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
E+ + G P V+ ++I GL + + +A + + ML+ G +PDS+T++ +L++L
Sbjct: 212 EMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRAN 271
Query: 415 R--TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
R TVD + A G + T++ + R + +N++ M++ G +P+L +
Sbjct: 272 RLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS 331
Query: 473 YNSYMDGL 480
YN +DGL
Sbjct: 332 YNFVIDGL 339
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + VVT+ LI G C++ D A L ++M + GC PNVV++ LI G R+
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M+ GCE VT L+ GLC R+ A ++ + R G P Y
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL--RRLRKGVEASGLMEKMLK 393
LV C A ++ E+ +G++ +++ I G R + ++M++
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G +PD VT+N + LC G+ + G+ PD +T+ ++SG + NR +
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ML+ G +PD TY+ +D LS A +
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 272
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 16/374 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TF I+ L + R + V + C P+ + ++ +A
Sbjct: 221 DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCV---------PD-SLTYSIMLDNLSRA 270
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
NR++ E M+ + G V +N I + +F A M+ P+++
Sbjct: 271 NRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 330
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGC-NPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
++N +I G C++ D A L R+M + GC P+V+ FNTLI GF + + + E
Sbjct: 331 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIE 390
Query: 286 MIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M C VT L+DG G + +A L+ + G P Y L+ G
Sbjct: 391 MKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHG 450
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL--PDSVT 402
A + DE+ KG P +I T++ + +A G+ +++ + PD++T
Sbjct: 451 MYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAIT 510
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR-ENRRKEGENLVNEM 461
+ L++ C T L + +G D TY++L++ E + + +M
Sbjct: 511 YRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQM 570
Query: 462 LDEGFIPDLATYNS 475
LD+ +P + +NS
Sbjct: 571 LDQDCVPSASIFNS 584
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 136/323 (42%), Gaps = 51/323 (15%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFY 213
++F ++ K+ ++D A++ RK++D +P V +N LI+GF K +A
Sbjct: 332 YNFVIDGLCKSGNVDD---AWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLL 388
Query: 214 DRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
M ++ PDVVT+N LI G + A L +EM+ GC PNVV++ LI G+
Sbjct: 389 IEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAK 448
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
++E ++ EM GC +T VL A FS+ G++ K
Sbjct: 449 HGMYEEAESLFDEMSAKGCFPDIIT----------YNTVLSA------FSKAGMMSK--- 489
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGLRRLRKGVEASGLMEK 390
EG V +L K + P I LI+G R + L+++
Sbjct: 490 ---------AEG-------VYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQE 533
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD----PDGMTYHILVSGYT 446
M G DS T+N L+ L T + L + LD P ++ LV +
Sbjct: 534 MTARGWSCDSYTYNVLIAKL---AETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFL 590
Query: 447 RENRRKEGENLVNEMLDEGFIPD 469
R ++V EM ++G + D
Sbjct: 591 RTGDVNSARSMVQEMNEKGHLVD 613
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 168/372 (45%), Gaps = 13/372 (3%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFH-FAVNAFVKANR 169
++ +R L + RF E + +L + + C P++ + H + A R
Sbjct: 243 SYTICIRVLGQAARFDEAYHILGKMEDSGCK---------PDV--VTHTVIIQVLCDAGR 291
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D F M K D +P Y L++ + + ++ MV D ++V++
Sbjct: 292 LSDAKAVFWKM-KASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
++ C+ + D AL +F EM+EKG +P S+N+LI GF FD + + M
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNAC 410
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + T + ++ G+ LKA + +G++P ++ L G G G+A
Sbjct: 411 GPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMA 470
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
V EL G P I T +I+ + K EA M++ G +PD + N L++
Sbjct: 471 KRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDT 530
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
L G+ +A +L ++P TY+ L+SG RE + KE L+ EM + P+
Sbjct: 531 LYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPN 590
Query: 470 LATYNSYMDGLS 481
L TYN+ +D LS
Sbjct: 591 LITYNTVLDCLS 602
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 26/376 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSE-LHSVLNFISANPCPCSN-------DGIFSCPEMERIFHF 159
D+ T I+ S + E LH+V +I C +GI +E+ F
Sbjct: 659 DYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEF 718
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
A N + +ND L +R L + ++ + L N F K LG
Sbjct: 719 AENIASRGILLNDFFLC-PLIRHLCKHKKALEAHQ-LFNKF-------KGLG-------- 761
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V ++N LI G D+A LF EM+ GC P+ ++N ++ + +E
Sbjct: 762 -VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEM 820
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM G E + VT ++ GL R+ +A +L + G P Y L++
Sbjct: 821 LKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 880
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L G A + +E+ + G P+ L+ G R L EKM+++GI PD
Sbjct: 881 LLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPD 940
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
++ L++ LC GR D GL+PD + Y++L+ G + R +E +L N
Sbjct: 941 IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000
Query: 460 EMLDEGFIPDLATYNS 475
EM +G IP+L TYNS
Sbjct: 1001 EMKKKGIIPNLYTYNS 1016
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 1/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + V N ++ F M++L G P YN++++ K ++ L M
Sbjct: 769 YNSLIRGLVDENLIDIAEDLFTEMKRLGCG-PDEFTYNLILDAMGKSMRVEEMLKVQKEM 827
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R + VT+N +ISG ++K+ + A+ L+ + +G +P ++ L+ G K
Sbjct: 828 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKM 887
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ N+ EM+E GCE + IL++G G C+L +G+ P Y L
Sbjct: 888 VDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTIL 947
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC G L +L + G P +I LI+GL + + EA L +M K+GI
Sbjct: 948 IDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGI 1007
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P+ T+N L+ L G+ +A ++ KG P TY+ L+ GY+
Sbjct: 1008 IPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYA 1067
Query: 457 LVNEMLDEGFIPDLATY 473
+M+ G P+ +TY
Sbjct: 1068 AYGQMIVGGCQPNSSTY 1084
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI VK +A+ Y MV D + P V T+++L+ F + + D L L EM
Sbjct: 174 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEME 233
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G PNV S+ IR +FDE ++ +M + GC+ VT +++ LC+ GR+
Sbjct: 234 ARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLS 293
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A + P Y L++K G++ +EV + + G ++++ T ++
Sbjct: 294 DAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVV 353
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L ++ + EA + ++M ++G+ P+ ++N L+ A L + G
Sbjct: 354 DALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 413
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+G T+ + ++ Y + + + M +G +PD+A N+ + L+ + +
Sbjct: 414 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGR 466
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 156/362 (43%), Gaps = 36/362 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K + N+ F ++++ P+ YN L++G + + + + + M R
Sbjct: 528 IDTLYKGGKGNEAWQLFHKLKEM-KIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTI 586
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+++T+N ++ +N + + A+ + M EKGC P++ S+NT++ G E + +E
Sbjct: 587 YPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAF 646
Query: 281 NMAYEM-----------------------------------IELGCEFSSVTCEILVDGL 305
M +M ++ GC + L++G+
Sbjct: 647 RMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGI 706
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
+ V K+ E + + RG+L DF L+ LC A A ++ ++ G
Sbjct: 707 LKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKT 766
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +LI GL A L +M + G PD T+N +L+ + R + +++
Sbjct: 767 GSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKE 826
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG + +TY+ ++SG + R ++ +L ++ EGF P TY +DGL + K
Sbjct: 827 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGK 886
Query: 486 SV 487
V
Sbjct: 887 MV 888
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 37/347 (10%)
Query: 176 AFEAMRKLI-DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++ DG PSV Y+VL+ F K R+ D L + M VKP+V ++ I I
Sbjct: 190 AMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR 249
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI------------RGFFGERKF----- 276
+ +FD A + +M + GC P+VV+ +I + F + K
Sbjct: 250 VLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKP 309
Query: 277 -------------DEG-----VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
D G V + M+ G + V+ +VD LC GRV +A +
Sbjct: 310 DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVF 369
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G+ P+ + Y L+ ALE+ + + G P+ I +
Sbjct: 370 DEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 429
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ ++A E M +GI+PD N +L L GR A R+ G+ PD +TY
Sbjct: 430 GQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITY 489
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+++ ++ ++ E N ++M++ G +PD+ NS +D L K
Sbjct: 490 TMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 161/375 (42%), Gaps = 12/375 (3%)
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIF 157
W + D T++ ++ S + SV+ +A ND I S +
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDS---GDSQSVVEVWNAMVADGYNDNIVS-------Y 349
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
V+A + R+++ L F+ M++ P YN LI+GF+K FD+AL ++ M
Sbjct: 350 TAVVDALCQVGRVDEALAVFDEMKEK-GMSPEQYSYNSLISGFLKADMFDRALELFNHMN 408
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
P+ T + I+ + ++ + A+ + M+ KG P+V + N ++ G +
Sbjct: 409 ACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLG 468
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ YE+ +G ++T +++ + +A D G +P L+
Sbjct: 469 MAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLI 528
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ L G A ++ +L + P+ TL+ GL R K E L+E+M +
Sbjct: 529 DTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYP 588
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ +T+N +L+ L G A + + KG PD +Y+ ++ G +E R +E +
Sbjct: 589 PNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRM 648
Query: 458 VNEMLDEGFIPDLAT 472
+M + PD AT
Sbjct: 649 FCQM-KKILAPDYAT 662
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 140/323 (43%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
+FVK M + L + S ++ L+ G +K +K++ F + + +
Sbjct: 669 SFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGIL 728
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ LI C++KK A LF + + G + S+N+LIRG E D ++
Sbjct: 729 LNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDL 788
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM LGC T +++D + RV + ++ + R+G Y ++ L
Sbjct: 789 FTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVK 848
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A+++ L +G P+ L++GL + K V+A L +ML+ G P+
Sbjct: 849 SKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTI 908
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N LL G T + +L +G++PD +Y IL+ R +G ++
Sbjct: 909 YNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLH 968
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
+ G PDL YN +DGL + +
Sbjct: 969 ELGLEPDLIVYNLLIDGLGKSER 991
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 37/269 (13%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M + VK +V TF + G A MRE G + N ++N LI F
Sbjct: 124 FDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIY-FLV 182
Query: 273 ERKFD-EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ FD E + + M+E G S T +L+ + F ++ +D
Sbjct: 183 KSGFDAEAMEVYKAMVEDGISPSVRTYSVLM----------------VAFGKK----RDV 222
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
D L +++E+ +G P+V + T I L + + EA ++ KM
Sbjct: 223 D---------------TVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKM 267
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
G PD VT +++ LCD GR DA + PD +TY L+
Sbjct: 268 EDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + N M+ +G+ ++ +Y + +D L
Sbjct: 328 QSVVEVWNAMVADGYNDNIVSYTAVVDAL 356
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 36/147 (24%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF-- 212
+ + ++ A R+NDGL F + +L P + +YN+LI+G K ++A+
Sbjct: 942 KSYTILIDTLCTAGRLNDGLCYFRQLHEL-GLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000
Query: 213 ---------------------------------YDRMVRDRVKPDVVTFNILISGFCRNK 239
Y+ ++R KP V T+N LI G+ +
Sbjct: 1001 EMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSG 1060
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTL 266
D A + +M GC PN ++ L
Sbjct: 1061 STDNAYAAYGQMIVGGCQPNSSTYMQL 1087
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 162/332 (48%), Gaps = 40/332 (12%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I++ ++ K +M D F+ M R+L+ PS+ YN LI+G+ K +K+
Sbjct: 589 IYNVLIDGLCKVRQMKDAEQLFDEMLARRLL---PSLITYNTLIDGYCKDGNPEKSFKVR 645
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM D ++P ++TFN L+ G + + A + EM+++G P+ +F+ L G+
Sbjct: 646 ERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN 705
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K D + + ++ G + ++ TC IL++ LC EG++ KA
Sbjct: 706 DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKA------------------- 746
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
E++ G A KG +P+ + T+I+G R V A ++ M K
Sbjct: 747 ----EEILGREMA------------KGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEK 790
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD + +NCL+ C++G +A++ KG+ P TY+IL+ GY R+ +
Sbjct: 791 QGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 850
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L+ EM D G +P++ +Y + ++ L K
Sbjct: 851 CFDLLKEMEDNGTMPNVVSYGTLINCLCKGSK 882
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 153/336 (45%), Gaps = 31/336 (9%)
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
KL PSV YN+LI G+ + EFDK M + P+VV++ LI+ C+ K
Sbjct: 824 KLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKL 883
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
A + R+M ++G +PNV +N LI G + K ++ + EM + G E + VT L
Sbjct: 884 LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTL 943
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGL G++ +A +++++ SR+G+ P F Y L+ GN + + +E+ G
Sbjct: 944 IDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGI 1003
Query: 362 LPSVIACTTLI-----EGLRRLRK---------------GV-----------EASGLMEK 390
P++ LI EG+ +K GV +A L ++
Sbjct: 1004 KPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQ 1063
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+++ I D T+N L+ VG+ + L + ++P+ TY I+V G+
Sbjct: 1064 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKD 1123
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
EM ++G + D+ + + GL +S
Sbjct: 1124 YMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRS 1159
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 11/320 (3%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+NA K ++ +L E + L+ P+ +YN +I+G+ + + A D M +
Sbjct: 734 LNALCKEGQIEKAEEILGREMAKGLV---PNEVLYNTMIDGYSRKGDLVGARMKIDAMEK 790
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD + +N LI FC + A +M+ KG +P+V ++N LI G+ + +FD+
Sbjct: 791 QGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 850
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM + G + V+ L++ LC ++L+A + D RGV P Y L++
Sbjct: 851 CFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLID 910
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G A +E++KKG +++ TLI+GL K EA ++ ++ ++G+ P
Sbjct: 911 GCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKP 970
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N L+ G L T G+ P TYH+L+S T KEG L
Sbjct: 971 DVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCT-----KEGIELT 1025
Query: 459 NEMLDE-GFIPDLATYNSYM 477
++ E PDL YN +
Sbjct: 1026 KKIFGEMSLQPDLLVYNGVL 1045
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 130/313 (41%), Gaps = 41/313 (13%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D RPS +Y I VK + K L ++RM DR+ P V +N+LI G C+ ++ A
Sbjct: 547 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDA 606
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
LF EM + P+++++NTLI DG
Sbjct: 607 EQLFDEMLARRLLPSLITYNTLI-----------------------------------DG 631
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C +G K+ ++ + P + L++ L G A V+ E+ +G +P
Sbjct: 632 YCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPD 691
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ L +G K A G+ E + G+ ++ T + LL LC G+ A+ +
Sbjct: 692 AFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILG 751
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY------MD 478
KGL P+ + Y+ ++ GY+R+ ++ M +G PD YN +
Sbjct: 752 REMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811
Query: 479 GLSNARKSVRQTR 491
+ NA + V + +
Sbjct: 812 DMENAEQEVNKMK 824
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 94/193 (48%)
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
SS + +L+D L + + ++ P F Y ++ + G LE+
Sbjct: 516 SSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELF 575
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + P+V LI+GL ++R+ +A L ++ML +LP +T+N L++ C
Sbjct: 576 NRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKD 635
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G + ++R ++P +T++ L+ G + ++ EN++ EM D+GF+PD T+
Sbjct: 636 GNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTF 695
Query: 474 NSYMDGLSNARKS 486
+ DG S+ K+
Sbjct: 696 SILFDGYSSNDKA 708
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 35/280 (12%)
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+K A LF +R +G P+ S L+ ++F +N+ ++E S
Sbjct: 494 ESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 553
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+ V K EL + P F Y L++ LC A ++ DE+
Sbjct: 554 MYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM 613
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ LPS+I TLI+G + ++ + E+M + I P +TFN LL+ L G
Sbjct: 614 LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMV 673
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYT------------------------------ 446
DA+ + +G PD T+ IL GY+
Sbjct: 674 EDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSIL 733
Query: 447 -----RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+E + ++ E ++ + +G +P+ YN+ +DG S
Sbjct: 734 LNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYS 773
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 176 AFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF +++I+ + + YN LI G +K + + D M ++P+ T++I++
Sbjct: 1057 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVK 1116
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
G C K + A +REM+EKG +V + L+ G E + E N+ EM
Sbjct: 1117 GHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 60/138 (43%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + +YN +++ + + DKA +M+ + D T+N LI G + K
Sbjct: 1035 QPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 1094
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM+ + P +++ +++G + + EM E G + LV GL
Sbjct: 1095 LIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLK 1154
Query: 307 NEGRVLKACELVIDFSRR 324
E R +A ++ + + R
Sbjct: 1155 EEWRSKEAENVISEMNGR 1172
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A + + D F+AM++ +P+ YNVL++G + + + A+ Y +++
Sbjct: 228 ICALCEEGCIGDAERLFDAMKE-AGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG 286
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+ V F LI GFC+ K+F A G+F EM G P V +N+L+ G F E +
Sbjct: 287 LNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEAL 346
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM LG TC I+V GLC+ G++ A + GV Y L+++
Sbjct: 347 ALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEY 406
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C GN AL + + G P+V++ ++LI+G + K A + +M+ +GI P+
Sbjct: 407 CRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNV 466
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L+ G A RL G+ P+ +T +LV G RENR +E V E
Sbjct: 467 VTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVME 526
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 156/368 (42%), Gaps = 40/368 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ VKA R F+ M R L+ PSV YN LIN KA +D+MV
Sbjct: 158 LDGLVKARRPGCAWELFDEMLRRGLV---PSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214
Query: 219 DRVKPDVVTF-----------------------------------NILISGFCRNKKFDL 243
++ P+VVT+ N+L+SG C+ +
Sbjct: 215 QQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNS 274
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A+ L++E+ + G NPN V F TLI GF ++F E M EM G + L+D
Sbjct: 275 AVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMD 334
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G G +A L + +R G+ P +F +V LC G +A + + + G
Sbjct: 335 GAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNL 394
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ A LI+ R+ EA +M + GI P+ V+++ L++ G+ A +
Sbjct: 395 NAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIY 454
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KG++P+ +TY L+ G+ + L EM++ G P+ T + +DGL
Sbjct: 455 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRE 514
Query: 484 RKSVRQTR 491
+ R
Sbjct: 515 NRVQEAVR 522
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 4/325 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V A + +++ L F +R L P++ N +++G VK R A +D M+R
Sbjct: 126 VIALSQMGLLDEALYVFRRLRTL----PALPACNAVLDGLVKARRPGCAWELFDEMLRRG 181
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P VVT+N LI+ A ++ +M + +PNVV++ T+I E +
Sbjct: 182 LVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAE 241
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M E G + + T +L+ G C V A L + + G+ P + L++
Sbjct: 242 RLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGF 301
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A + E+ + G P+V +L++G R EA L ++M + G+ PD
Sbjct: 302 CKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDE 361
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T + ++ LCD G+ ADR G++ + Y+ L+ Y R +E
Sbjct: 362 FTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTR 421
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + G P++ +Y+S +DG S K
Sbjct: 422 MTEVGIEPNVVSYSSLIDGHSKRGK 446
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 26/249 (10%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ + YN LI+ + + ++AL RM ++P+VV+++ LI G + K +A+ ++
Sbjct: 395 NAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIY 454
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM KG PNVV++ LI G D + EMIE G +++T +LVDGLC E
Sbjct: 455 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRE 514
Query: 309 GRVLKACELVIDFSRRGVLPKD----FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
RV +A V+++S G+ D F F + E+ +P+
Sbjct: 515 NRVQEAVRFVMEYS--GLKCSDIHSVFSNFTIEEECL--------------------IPN 552
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ TLI GL + EA L M K G++PDS T+ L+ C +G ++A L
Sbjct: 553 SVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYA 612
Query: 425 LASTKGLDP 433
G+ P
Sbjct: 613 DMMKIGVKP 621
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 18/330 (5%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF ++ F KA R ++ F M + P+V +YN L++G + +AL Y
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRF-GVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R + PD T +I++ G C + +A + ++E G N N ++N LI +
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGN 411
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M E+G E + V+ L+DG G++ A + + +G+ P Y
Sbjct: 412 LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTA 471
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR-------LRKGVEASGLM 388
L+ G A + E+ + G P+ I + L++GL R +R +E SGL
Sbjct: 472 LIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLK 531
Query: 389 EKML----------KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ +E ++P+SV + L+ L G+ +A +L G+ PD TY
Sbjct: 532 CSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTY 591
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIP 468
+L+ G L +M+ G P
Sbjct: 592 TLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y+ LI+G K + A+ Y MV ++P+VVT+ LI G +N D A L
Sbjct: 429 PNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRL 488
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE-----FSSVTCE--- 299
+EM E G +PN ++ + L+ G E + E V E L C FS+ T E
Sbjct: 489 HKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEEC 548
Query: 300 ---------ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
L+ GL +G+ +A +L + G++P F Y L+ C G A+
Sbjct: 549 LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAM 608
Query: 351 EVVDELWKKGNLPS 364
+ ++ K G P+
Sbjct: 609 MLYADMMKIGVKPT 622
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 171/330 (51%), Gaps = 8/330 (2%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
A+NA+ K ++++ + F K+ +G P+V YN LI+G K ++AL F RMV
Sbjct: 247 AINAYCKGGKIDEAVGLF---LKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMV 303
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
++V P +VT+ IL++G + +KFD A + EM KG +PN FN LI G+ + D
Sbjct: 304 ENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMD 363
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + + +M G + ++VT L+ G C ++ +A E V+++ VL + D V
Sbjct: 364 DALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQA-EQVLEYLLSNVLSVNEDACSYV 422
Query: 338 -EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEG 395
LC AL++V L + + T L+ GL + K +EA L ++ K+G
Sbjct: 423 LHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKG 482
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ ++ T N LL LC+ G + + +GL DG++Y+ L+ G + + +E
Sbjct: 483 LAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAF 542
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +M+ +GF PD TYN M GL++ K
Sbjct: 543 KLKEKMMKQGFKPDTYTYNFLMKGLADKGK 572
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 41/361 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ K+ R+ + L+ F+ ++++ + PS+ Y +L+NG VK +FD+A M
Sbjct: 283 IDGLCKSGRLEEALM-FKG--RMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYS 339
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF------- 271
P+ FN LI G+ R D AL + +M KG PN V+ NTL++GF
Sbjct: 340 KGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQ 399
Query: 272 ----------------------------GERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
KFD + + ++ + + +LV
Sbjct: 400 AEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVC 459
Query: 304 GLCNEGRVLKACELVIDFS-RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
GLC G+ L+A +L + ++G+ L+ LC GN V E+ ++G +
Sbjct: 460 GLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLV 519
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
I+ TLI G + K EA L EKM+K+G PD+ T+N L++ L D G+ D R+
Sbjct: 520 LDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRV 579
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
A G+ P+ TY +++ GY +R +L N+++ YN + S
Sbjct: 580 LHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSK 639
Query: 483 A 483
A
Sbjct: 640 A 640
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI G K + ++A ++M++ KPD T+N L+ G K D + E +
Sbjct: 525 YNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAK 584
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G PN+ ++ ++ G+ + D V++ +++ E S V IL+ G
Sbjct: 585 DHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFT 644
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A +L + P F Y ++ +C A + +E+ +G +P+V T LI
Sbjct: 645 EAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALI 704
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G +L + + ++++M I P+ +T+ +++ C +G T +A +L G+
Sbjct: 705 GGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGIS 764
Query: 433 PDGMTYHILVSGYTRENRRKE 453
PD +TY +L GY +EN +E
Sbjct: 765 PDTVTYTVLQKGYCKENELEE 785
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 159/406 (39%), Gaps = 49/406 (12%)
Query: 111 TFLFIVRSLASSYRFSELHSVL-NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
T+ +V L +F E +SVL S P E +F+ ++ + +
Sbjct: 313 TYGILVNGLVKFEKFDEANSVLVEMYSKGFSP-----------NEFVFNALIDGYSRKGN 361
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV---------------------------- 201
M+D L + M L +P+ +N L+ GF
Sbjct: 362 MDDALRVRDDM-TLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACS 420
Query: 202 -------KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL-FREMRE 253
K +FD AL ++ +K + +L+ G C+ K A+ L FR +
Sbjct: 421 YVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADK 480
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
KG N + N L+ G +E + EM+E G ++ L+ G C G++ +
Sbjct: 481 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEE 540
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A +L ++G P + Y L++ L +G V+ E G +P++ ++E
Sbjct: 541 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLE 600
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + A L K++ + V +N L+ G +A +LR + + P
Sbjct: 601 GYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
TY ++ G + +E + + EM +EG +P++ Y + + G
Sbjct: 661 TIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGG 706
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 8/284 (2%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
+++LI+G + + R + A F + R + D++ + IL S F ++
Sbjct: 133 TLKRLIEGNANTPLKKT------DARLSEIASAFLELGERSHGELDLLIY-ILCSQF-QH 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
F A F KG P++ S N L+ + + + M G T
Sbjct: 185 LGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTY 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
++ C G++ +A L + GVLP Y L++ LC G AL + +
Sbjct: 245 ATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVE 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
PS++ L+ GL + K EA+ ++ +M +G P+ FN L++ G D
Sbjct: 305 NKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
A R+R + KGL P+ +T++ L+ G+ R N+ ++ E ++ +L
Sbjct: 365 ALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLL 408
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 26/278 (9%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAV- 161
F+ D T+ F+++ LA + ++ VL+ + G+ + I+ +A+
Sbjct: 551 QGFKPDTYTYNFLMKGLADKGKMDDVGRVLH-------EAKDHGV-----VPNIYTYALM 598
Query: 162 -NAFVKANRMNDGLLAFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYDRMVR 218
+ A+R+++ + F KL+ + +S +YN+LI K F +A D M
Sbjct: 599 LEGYCNADRIDNAVSLF---NKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRS 655
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P + T++ +I G C N + A G+F EMR +G PNV + LI G+ + D+
Sbjct: 656 SNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQ 715
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM + + +T I++DG C G +A +L+ + G+ P Y L +
Sbjct: 716 IESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQK 775
Query: 339 KLCGEGNAGIALEVVDELWKKGNLP-SVIACTTLIEGL 375
C E E+ + L +P I TTL++ L
Sbjct: 776 GYCKEN------ELEETLQGDTAVPLEEITYTTLVDKL 807
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ + A KA + +AMR + P++ Y+ +I+G ++A G ++
Sbjct: 629 VYNILIAAHSKAGNFTEAFKLRDAMRS-SNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEE 687
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + + P+V + LI G+C+ + D + +EM PN +++ +I G+
Sbjct: 688 MRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGN 747
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + EMI G +VT +L G C E + + + V ++ Y
Sbjct: 748 TKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ-----GDTAVPLEEITYTT 802
Query: 336 LVEKLCGEGNAGIA 349
LV+KL +A ++
Sbjct: 803 LVDKLHPHSDAALS 816
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 359 KGNLPSVIACTTLIEGLRR--------------LRKGV---------------------E 383
KG PS+ +C L+ L + R GV E
Sbjct: 200 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 259
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A GL KM + G+LP+ VT+N L++ LC GR +A + ++P +TY ILV+
Sbjct: 260 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 319
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
G + + E +++ EM +GF P+ +N+ +DG S
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYS 357
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 149/328 (45%), Gaps = 5/328 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFY 213
+ + +N F+K + FE K DG +P V +YN +I F D+A+
Sbjct: 495 KTYSMLINGFLKLKDWANAFSVFEDFTK--DGLKPDVVLYNNIITAFCGMGNMDRAICMV 552
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M ++R +P TF +I GF R + AL +F MR GC P V ++N LI G +
Sbjct: 553 RQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEK 612
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+ + V + EM G + T L+ G + G KA + G+ + Y
Sbjct: 613 RQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTY 672
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKML 392
L++ C G AL V E+ K N+P + LI+G R EA+ LM++M
Sbjct: 673 EALLKSCCKSGRMQSALAVTKEMSAK-NIPRNTFVYNILIDGWARRGDVWEAADLMQQMR 731
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
KEG+LPD T+ + C G A + G+ P+ TY L++G+ R + +
Sbjct: 732 KEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPE 791
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + EM GF PD A Y+ + L
Sbjct: 792 KALSCFEEMKLAGFKPDKAVYHCLVTSL 819
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 1/328 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+H ++ + L+ F+ +++ PSV Y LIN + K + KAL
Sbjct: 426 IYHTMMDGYTMIGNEEKCLIVFDRLKEC-GFFPSVISYGCLINLYTKVGKVSKALEISKM 484
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +K ++ T+++LI+GF + K + A +F + + G P+VV +N +I F G
Sbjct: 485 MKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGN 544
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + M +M + ++ T ++ G G + +A E+ R G +P Y
Sbjct: 545 MDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNA 604
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L + A+ ++DE+ G P+ TTL++G L +A + EG
Sbjct: 605 LILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEG 664
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D T+ LL+ C GR A + S K + + Y+IL+ G+ R E
Sbjct: 665 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 724
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+L+ +M EG +PD+ TY S+++ A
Sbjct: 725 DLMQQMRKEGLLPDIHTYTSFINACCKA 752
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 3/333 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V + + M+ FE+MR PS +Y+ LI+ + R+ ++AL +M
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRAR-GIEPSSHVYSSLIHAYAVGRDMEEALHCVRKM 345
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++ +VT++I++ GF + D A F E +EK + N V + +I
Sbjct: 346 KEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNM 405
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYFG 335
D + EM E G + ++DG G K C +V D + G P Y
Sbjct: 406 DRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEK-CLIVFDRLKECGFFPSVISYGC 464
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ G ALE+ + G ++ + LI G +L+ A + E K+G
Sbjct: 465 LINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDG 524
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD V +N ++ C +G A + + P T+ ++ G+ R +
Sbjct: 525 LKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRAL 584
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + M G IP + TYN+ + GL R+ +
Sbjct: 585 EIFDMMRRSGCIPTVHTYNALILGLVEKRQMTK 617
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++S S R +V +SA + P +++ ++ + +
Sbjct: 668 DVYTYEALLKSCCKSGRMQSALAVTKEMSAK----------NIPRNTFVYNILIDGWARR 717
Query: 168 NRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ + + MRK +G P + Y IN K + KA M +KP++
Sbjct: 718 GDVWEAADLMQQMRK--EGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLK 775
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG------V 280
T+ LI+G+ R + AL F EM+ G P+ ++ L+ F + +
Sbjct: 776 TYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLL 835
Query: 281 NMAYEMIE 288
++ EMIE
Sbjct: 836 SVCREMIE 843
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 138/295 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IYN +I KCR +AL ++MV R PDVVTFN LI+ FCR + AL L
Sbjct: 379 PNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKL 438
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
RE + PN +S+ LI GF + ++ EMI G VT L+ GL
Sbjct: 439 LREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVV 498
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V +A + + R V+P Y L+ LC + A ++ E+ ++ P
Sbjct: 499 SGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFV 558
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G R K +A + E M ++G D V +N +++ C G +A
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMR 618
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G PD TY L+ GY ++ K + +M+ P++ TY S + G N
Sbjct: 619 KVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCN 673
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 157/343 (45%), Gaps = 20/343 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ V + ++++ L+ E M R+++ P +IYNVLI+G K R A M+
Sbjct: 493 IHGLVVSGQVDEALMVREKMAERQVM---PDANIYNVLISGLCKKRMLSAAKNLLVEMLE 549
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+V+PD + LI GF R+ K A +F M EKG ++V++N +I+G+ +E
Sbjct: 550 QKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNE 609
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V M ++GC T L+DG +G + A + D +R P Y L+
Sbjct: 610 AVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLIC 669
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C GN A + + +G P+V+ T LI L + K ++A+ E ML P
Sbjct: 670 GYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSP 729
Query: 399 DSVTFNCLLEDL--CDVG----RTVDADRLR----LLASTKGLDPDGM-----TYHILVS 443
+ T + L+ L C G D D+ LL KGL DG+ Y+ ++
Sbjct: 730 NDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIF 789
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
R N + L +M ++G +PD T+ S + G S+ KS
Sbjct: 790 SLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKS 832
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 6/308 (1%)
Query: 178 EAMRKLIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
E R+LI+ R P YNVLI+G+ + + + L M + P VVT+ +
Sbjct: 293 EEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAI 352
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I R L EM+E+G +PNV +NT+I R + + + +M+
Sbjct: 353 IHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRF 412
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ VT L+ C EG V +A +L+ + RR + P Y L+ C G +A +
Sbjct: 413 DPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASD 472
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
++ E+ +G+ P V+ LI GL + EA + EKM + ++PD+ +N L+ LC
Sbjct: 473 LLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLC 532
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
A L + + + PD Y L+ G+ R ++ + + M ++G D+
Sbjct: 533 KKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIV 592
Query: 472 TYNSYMDG 479
YN+ + G
Sbjct: 593 AYNAMIKG 600
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 145/326 (44%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + + + GLL M ++ P+V Y +I+ + + K M
Sbjct: 314 YNVLIDGYCRRGDVGRGLLLLGEM-EMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEM 372
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ P+V +N +I C+ + AL + +M +P+VV+FNTLI F E
Sbjct: 373 KERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDV 432
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + E I E + ++ L+ G C G V+ A +L+++ RG P L
Sbjct: 433 EEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGAL 492
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ L G AL V +++ ++ +P LI GL + R A L+ +ML++ +
Sbjct: 493 IHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKV 552
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD + L++ + DA ++ KG D + Y+ ++ GY + E
Sbjct: 553 QPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVM 612
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
++ M G IPD TY + +DG +
Sbjct: 613 CMSSMRKVGCIPDEFTYTTLIDGYAK 638
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 212 FYDRMVRDRVK-PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+ + + RDR D + +++ G C + + L +GC P V +N LI G+
Sbjct: 262 YGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGY 321
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
G+ + EM G + VT ++ L + + K L+ + RG+ P
Sbjct: 322 CRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNV 381
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI----------EGLRRLRK 380
Y ++ LC +A AL V++++ P V+ TLI E L+ LR+
Sbjct: 382 QIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLRE 441
Query: 381 GVE-------------------------ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ AS L+ +M+ G PD VT L+ L G+
Sbjct: 442 AIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQ 501
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+A +R + + + PD Y++L+SG ++ +NL+ EML++ PD Y +
Sbjct: 502 VDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTT 561
Query: 476 YMDG------LSNARK 485
+DG LS+ARK
Sbjct: 562 LIDGFIRSDKLSDARK 577
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC---DVGRTVDADRLRLLA 426
++ GL + E L+E EG +P +V +N L++ C DVGR L LL
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRG-----LLLLG 335
Query: 427 ST--KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P +TY ++ R++ + E+L+ EM + G P++ YN+ + L R
Sbjct: 336 EMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCR 395
Query: 485 KS 486
+
Sbjct: 396 SA 397
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 191/414 (46%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
I+ F+ + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G+ P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ + + + G P V + LI GL + K +A+ L ++ML +G++P+ V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
TF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 462 LDEGFIPDLATYNSYMDG 479
+ +G PD TY + +DG
Sbjct: 303 IMKGLKPDKFTYTTLIDG 320
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/545 (24%), Positives = 226/545 (41%), Gaps = 71/545 (13%)
Query: 14 HNKSPPPPPAPSIPLP---SRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTN--NQ 68
H SPP P+ LP S P P + S++ P T L L+ +T ++ Q
Sbjct: 7 HRVSPPLSSNPNAHLPFVFSSPSLVP-SHGSLSYCPLMLLTGFLCILRFPFITQSSFLGQ 65
Query: 69 ITPSSLLHFLKSKLHHHPQFTHY-----------------------DFHIFAWASTIDSF 105
+ +S++ ++ + P+F + F WA T F
Sbjct: 66 LDKASIIKIIQQDQWNDPKFVRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGF 125
Query: 106 RHDHTTFL----------------FIVRSLASSYRFSELHSVLNFISANPCPCSN----- 144
++ F ++ L SS R V + + C
Sbjct: 126 CLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVF 185
Query: 145 DGIFSC--------------PEMERIFHF----AVNAFV-KANRMNDGLLAFEAMRKLID 185
D +FS M R F + NAF+ + + G L+ + R ++
Sbjct: 186 DALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVG 245
Query: 186 G--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
SV YN++I K + A + +M + + PD+VT+N LI G+ + D
Sbjct: 246 AGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDE 305
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+ LF EM++ GC P+V+++N LI F + + + +EM G + + VT L+D
Sbjct: 306 SFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLID 365
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LC E + +A + ++D R G+ P +F Y L++ C G AL++ DE+ +
Sbjct: 366 ALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF 425
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+V+ TTL++GL + + +EA L M+K G+ P+ T+ L+ R +A L
Sbjct: 426 NVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELL 485
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K + PD + Y ++ G +N+ +E E +++EM G + Y MD
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545
Query: 484 RKSVR 488
K+V
Sbjct: 546 GKTVE 550
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 150/355 (42%), Gaps = 37/355 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + K +++ FE M+ + P V YN LIN F K + KA F M
Sbjct: 294 IDGYGKLGLLDESFCLFEEMKD-VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG 352
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+VVT++ LI C+ A+ +MR G +PN ++ +LI + +
Sbjct: 353 LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDAL 412
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE-- 338
+A EM+++ F+ VT L+DGLC EGR+++A +L + GV P Y LV
Sbjct: 413 KLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGH 472
Query: 339 ---------------------------------KLCGEGNAGIALEVVDELWKKGNLPSV 365
LC + V+ E+ G +
Sbjct: 473 IKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANS 532
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ T ++ + K VEA L+++M G+ VTF L++ LC G +A
Sbjct: 533 VIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFAR 592
Query: 426 ASTKGLDPDGMTY-HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L P+ + L+ G + N + + L +EM D+ +PD Y + +DG
Sbjct: 593 MADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDG 647
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K RM + F AM K P++ Y L++G +K + + AL + +
Sbjct: 434 LDGLCKEGRMMEAEDLFRAMIK-AGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKK 492
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KPD++ + +I G C K + + EM+ G N V + + +F K E +
Sbjct: 493 IKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEAL 552
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM +LG E + VT +L+DGLC ++G++ + DYF +
Sbjct: 553 NLLQEMCDLGVEVTIVTFCVLIDGLC----------------KKGLVEEAIDYFARMADF 596
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ N +V CT LI+GL + A L ++M + ++PD
Sbjct: 597 NLQPN------------------NVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDK 638
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+ + L++ +A +R S G++ D Y LV G ++ N ++ +NE
Sbjct: 639 IAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNE 698
Query: 461 MLDEGFIPD 469
M+ +G +PD
Sbjct: 699 MIGKGIVPD 707
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++A+ K + + L + M L ++ + VLI+G K ++A+ ++ R
Sbjct: 534 IYTIRMDAYFKTGKTVEALNLLQEMCDL-GVEVTIVTFCVLIDGLCKKGLVEEAIDYFAR 592
Query: 216 MVRDRVKPD-VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++P+ V LI G C+N + A LF EM++K P+ +++ LI G +
Sbjct: 593 MADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHK 652
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
F E +N+ M ELG E LV GL V +A + + +G++P +
Sbjct: 653 DFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCI 712
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI-EGLRRLRKG 381
L+ K G+ A+E+ DEL KK L ++ L+ E + R R G
Sbjct: 713 RLLRKYYELGSIDEAIELHDELLKKVPLDELLEEQNLMPEKILRCRDG 760
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 182/390 (46%), Gaps = 6/390 (1%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-DGIFS----CPEMER 155
T + F+H ++ + L + + + +SVL + + C D ++S C
Sbjct: 2 TRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFG 61
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F + + + + + F M++ P N L++ F K + D F+
Sbjct: 62 VFDALFSVLIDLGMLEEAIQCFSKMKRF-RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ +P V T+NI+I C+ + A GLF EM+ +G P+ V++N++I GF +
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ V EM ++ CE +T L++ C G++ E + G+ P Y
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV+ C EG A++ ++ + G +P+ T+LI+ ++ +A L +ML+ G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ + VT+ L++ LCD R +A+ L T G+ P+ +Y+ L+ G+ +
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+NE+ G PDL Y +++ GL + K
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 41/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K R++D + FE M+ + P V YN LIN F K + L FY M
Sbjct: 168 YNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPIGLEFYREM 226
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +KP+VV+++ L+ FC+ A+ + +MR G PN ++ +LI
Sbjct: 227 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 286
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+++G E++ VT L+DGLC+ R+ +A EL GV+P Y L
Sbjct: 287 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 346
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N ALE+++EL +G P ++ T I GL L K A +M +M + GI
Sbjct: 347 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406
Query: 397 LPDS-----------------------------------VTFNCLLEDLCD---VGRTVD 418
+S VTF L++ LC V + V
Sbjct: 407 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV- 465
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
D +++ GL + + ++ G ++N+ + L +M+ +G +PD Y S MD
Sbjct: 466 -DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 524
Query: 479 G 479
G
Sbjct: 525 G 525
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 34/282 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ YN LI+GFVK + D+AL + + +KPD++ + I G C +K + A +
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E G N + + TL+ +F EG+++ EM EL E + VT +L+DGLC
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V KA +D+ R + DF GL + NA I ++D L K + +
Sbjct: 458 NKLVSKA----VDYFNR--ISNDF---GL------QANAAIFTAMIDGLCKDNQVEA--- 499
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
A+ L E+M+++G++PD + L++ G ++A LR +
Sbjct: 500 ----------------ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 543
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G+ D + Y LV G + N+ ++ + + EM+ EG PD
Sbjct: 544 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++A+ K+ +GL + M++L D +V + VLI+G K + KA+ +++R
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKEL-DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 470
Query: 216 MVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ D ++ + F +I G C++ + + A LF +M +KG P+ ++ +L+ G F +
Sbjct: 471 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 530
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + + +M E+G + + LV GL + ++ KA + + G+ P +
Sbjct: 531 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 590
Query: 335 GLVEKLCGEGNAGIALEVVDELWK--------KGNLPSVIACTTLIEGLRRLRKGVEASG 386
+++K G A+E+ L K LP++ + L+ + S
Sbjct: 591 SVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSDQNLVSSREHEEQETRISN 650
Query: 387 LMEKML 392
L K+L
Sbjct: 651 LQPKLL 656
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 195/416 (46%), Gaps = 25/416 (6%)
Query: 80 SKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISAN- 138
S LH +P T ++F+ S + S +H HT V SL+ F ++ NF++ N
Sbjct: 58 SLLHQNPTLTAFEFNKI-LGSLVKS-KHYHT-----VLSLSQQMEFEGINP--NFVTFNI 108
Query: 139 --PCPCSNDGI-FSCPEMERIFHFA-------VNAFVKA----NRMNDGLLAFEAMRKLI 184
C C I F+ + +I +N F+K +++ L + + L
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
VS Y LING K E AL R+ V+ + V +N +I G ++K + A
Sbjct: 169 FHLDQVS-YGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L+ EM K +P+VV+++ LIRGFF K + +++ +MI + T ILVDG
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C EGR+ KA ++ + + P + LV+ C + V + K+G P+
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ +L++G +++ +A + M + G+ + ++N ++ C + + A +L +
Sbjct: 348 VVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFI 407
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
K + PD +TY+ L+ G + + LVNEM D G P++ TYNS ++ L
Sbjct: 408 EMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 133/262 (50%), Gaps = 13/262 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F ++ D + F M L + +P V +N+L++GF K KA D M+
Sbjct: 250 IRGFFIVGKLKDAIDLFNKMI-LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD 308
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KP+V TFN L+ GFC+++K +F M ++G PNVV++ +L+ G+ ++ ++
Sbjct: 309 IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAK 368
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M + G + + I+++G C +V KA +L I+ + ++P Y L++ L
Sbjct: 369 KIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGL 428
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A ++V+E+ +G P++I +++ + L+ K+ +GI P+
Sbjct: 429 CKSGKISYAFQLVNEMHDRGQPPNIITYNSIL------------NALLTKLKDQGIQPNM 476
Query: 401 VTFNCLLEDLCDVGRTVDADRL 422
T L++ LC G+ A ++
Sbjct: 477 HTDTILIKGLCQSGKLEAARKV 498
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 35/310 (11%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF- 263
+ D A+ ++ ++ FN ++ ++K + L L ++M +G NPN V+F
Sbjct: 48 DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFN 107
Query: 264 ----------------------------------NTLIRGFFGERKFDEGVNMAYEMIEL 289
NT I+GF + + + +N +++ L
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G V+ L++GLC G A +L+ + V Y +++ + + + A
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ E+ K P V+ + LI G + K +A L KM+ E I PD TFN L++
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C GR A + + + + P+ T++ LV G+ ++ + KEG+ + M+ +G P+
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347
Query: 470 LATYNSYMDG 479
+ TY S MDG
Sbjct: 348 VVTYCSLMDG 357
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 50/194 (25%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK------------LIDG------------------ 186
F+ V+ F K +M +G F M K L+DG
Sbjct: 316 FNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMS 375
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+V YN++INGF K ++ DKA+ + M + PDVVT+N LI G C++ K
Sbjct: 376 QRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKIS 435
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV--NMAYEMIELGCEFSSVTCEI 300
A L EM ++G PN++++N+++ + K D+G+ NM T I
Sbjct: 436 YAFQLVNEMHDRGQPPNIITYNSILNALLTKLK-DQGIQPNMH-------------TDTI 481
Query: 301 LVDGLCNEGRVLKA 314
L+ GLC G++ A
Sbjct: 482 LIKGLCQSGKLEAA 495
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 3/311 (0%)
Query: 175 LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
+AF K+I+ S ++Y N +IN K + A + MV +KP V T+ LI
Sbjct: 418 VAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLI 477
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
SG+C++ A L+ EM KG PN V+F LI G K E + EM+EL
Sbjct: 478 SGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKIL 537
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT +L++G C EG +A EL+ + ++G+ P + Y L+ LC G A E
Sbjct: 538 PNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEF 597
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++L K + T L++G + + EA ++M+ G+ D V++ L+ +
Sbjct: 598 INDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN 657
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ + LR + KG+ PD + Y IL+ G+ + K+ M+ EG++P+ T
Sbjct: 658 QNDRILFELLREMHG-KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVT 716
Query: 473 YNSYMDGLSNA 483
Y + ++GL A
Sbjct: 717 YTALVNGLFKA 727
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 6/327 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+++ +N+ K ++ + L F M R L P+ Y +LI+GF + + D A ++
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGL---NPNDVTYTILIDGFGRRAKLDVAFYYF 423
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++M+ + V ++N +I+ C+ K +A LF+EM +KG P V ++ +LI G+ +
Sbjct: 424 NKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKD 483
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + +EM G ++VT L+ GLC ++ +A +L + +LP + Y
Sbjct: 484 GLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTY 543
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+E C EGN A E++DE+ KKG P LI GL + EA + +
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+ D + + LL+ C GR +A R +GL D ++Y +L+SG +N R
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL 663
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
E L+ EM +G PD Y +DG
Sbjct: 664 FE-LLREMHGKGMQPDNVIYTILIDGF 689
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 36/370 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + +V+ R+ DG+L MR P V + L+N + R+F + L +D +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDY-GLLPEVRTLSALLNALARIRKFRQVLELFDTL 216
Query: 217 VRDRVKPD-----------------------------------VVTFNILISGFCRNKKF 241
V VKPD +VT+N+ I+G C++K+
Sbjct: 217 VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRV 276
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
A+ + R + EKG ++V++ TL+ G ++F+ G+ M EMIELG S L
Sbjct: 277 WEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGL 336
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++GL G + A EL+ + GV+P F Y ++ LC G A + + ++G
Sbjct: 337 IEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+ + T LI+G R K A KM++ GI ++N ++ C G+ A+
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAEL 456
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L KGL P TY L+SGY ++ + L +EM +G P+ T+ + + GL
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516
Query: 482 NARKSVRQTR 491
K ++
Sbjct: 517 QINKMAEASK 526
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 2/314 (0%)
Query: 169 RMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R+ + + E M ++I+ PS + + LI G +K + A +++ + V P++
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N +I+ C+ K + A LF M E+G NPN V++ LI GF K D +M
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
IE G + + +++ C G++ A L + +G+ P Y L+ C +G
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ E+ KG P+ + T LI GL ++ K EAS L ++M++ ILP+ VT+N L
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+E C G T A L KGL PD TY L++G R E + +N++ +
Sbjct: 547 IEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ 606
Query: 467 IPDLATYNSYMDGL 480
D Y + + G
Sbjct: 607 RLDELCYTALLQGF 620
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N K +M L F+ M +D +P+V+ Y LI+G+ K KA Y
Sbjct: 438 YNSMINCQCKFGKMKMAELLFKEM---VDKGLKPTVATYTSLISGYCKDGLVPKAFKLYH 494
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P+ VTF LI G C+ K A LF EM E PN V++N LI G E
Sbjct: 495 EMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREG 554
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ EMI+ G + T L+ GLC+ GRV +A E + D + + Y
Sbjct: 555 NTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYT 614
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ C EG AL E+ +G +++ LI G + L+ +M +
Sbjct: 615 ALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE-LLREMHGK 673
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD+V + L++ G A + +G P+ +TY LV+G + E
Sbjct: 674 GMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEA 733
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ L ML IP+ TY ++D L+
Sbjct: 734 KLLFKRMLVGEAIPNHITYGCFLDHLT 760
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 157/324 (48%), Gaps = 9/324 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD--KALGFYD 214
F + + N+M + F+ M +L P+ YNVLI G CRE + +A D
Sbjct: 508 FTALICGLCQINKMAEASKLFDEMVEL-KILPNEVTYNVLIEG--HCREGNTTRAFELLD 564
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ + PD T+ LI+G C + A ++ K + + + L++GF E
Sbjct: 565 EMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEG 624
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG-RVLKACELVIDFSRRGVLPKDFDY 333
+ E + EM+ G + V+ +L+ G N+ R+L EL+ + +G+ P + Y
Sbjct: 625 RIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL--FELLREMHGKGMQPDNVIY 682
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ GN A E + +G +P+ + T L+ GL + EA L ++ML
Sbjct: 683 TILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLV 742
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+P+ +T+ C L+ L G +A +L A +G + +TY+IL+ GY + + +E
Sbjct: 743 GEAIPNHITYGCFLDHLTKEGNMENALQLH-NAMLQGSFANTVTYNILIRGYCQIGKFQE 801
Query: 454 GENLVNEMLDEGFIPDLATYNSYM 477
L++ M+ G +PD TY++++
Sbjct: 802 AAKLLDVMIGIGMVPDCITYSTFI 825
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 145/327 (44%), Gaps = 35/327 (10%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S+ YNV ING K + +A+ + +K D+VT+ L+ G CR ++F++ + +
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
EM E G P+ + + LI G + + ++ +LG + +++ LC
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378
Query: 309 GRVLKACELVIDFSRRGVLPKDFDY------FGLVEKL---------------------- 340
G++ +A L + RG+ P D Y FG KL
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSY 438
Query: 341 -------CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
C G +A + E+ KG P+V T+LI G + +A L +M
Sbjct: 439 NSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTG 498
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI P++VTF L+ LC + + +A +L + P+ +TY++L+ G+ RE
Sbjct: 499 KGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTR 558
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
L++EM+ +G PD TY + GL
Sbjct: 559 AFELLDEMIKKGLSPDTYTYRPLIAGL 585
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L+ GF K +AL MV ++ D+V++ +LISG N+ + L REM
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFELLREMH 671
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P+ V + LI GF + Y MI G +SVT LV+GL G V
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L +P Y ++ L EGN AL++ + + + G+ + + LI
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILI 790
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G ++ K EA+ L++ M+ G++PD +T++ + + C G A + +GL
Sbjct: 791 RGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK 850
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
PD + ++ L+ L N+M+ G P +TY+S M L+
Sbjct: 851 PDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN KA +N+ L F+ M + + P+ Y ++ K + AL ++ M++
Sbjct: 721 VNGLFKAGYVNEAKLLFKRML-VGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS 779
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ VT+NILI G+C+ KF A L M G P+ ++++T I + D +
Sbjct: 780 F-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAM 838
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+M M++ G + V L+ C G + +A +L D RG+ P Y L+ +L
Sbjct: 839 DMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQL 898
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 6/211 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLI-DGR-PSVSIYNVLINGFVKCREFDKALGFY 213
I+ ++ F+K+ + AFE +I +G P+ Y L+NG K ++A +
Sbjct: 681 IYTILIDGFIKSGNLKK---AFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLF 737
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
RM+ P+ +T+ + + + AL L M + G N V++N LIRG+
Sbjct: 738 KRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQI 796
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
KF E + MI +G +T + C G V A ++ +RG+ P +
Sbjct: 797 GKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVF 856
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
L+ C G AL++ +++ +G P+
Sbjct: 857 NFLIHACCLNGELDRALQLRNDMMLRGLKPT 887
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 87/339 (25%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVV-----------------SFNTLIRG 269
+F ILI +N F A L + + +G NP+ + F+ LI+
Sbjct: 105 SFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQH 164
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ ++ +GV + M + G T L++ L + + EL GV P
Sbjct: 165 YVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPD 224
Query: 330 DFDYFGLVEKLC--------------GEGNA-------------GI--------ALEVVD 354
+ Y +V+ LC EGN G+ A+EV
Sbjct: 225 CYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKR 284
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRK---GVE----------------ASGLMEKMLKE- 394
L +KG ++ TL+ GL R+++ G+E SGL+E ++K
Sbjct: 285 SLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMG 344
Query: 395 ---------------GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
G++P+ +N ++ LC G+ +A+ L + + +GL+P+ +TY
Sbjct: 345 SIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYT 404
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
IL+ G+ R + N+M++ G + +YNS ++
Sbjct: 405 ILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMIN 443
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K M + L AM L + YN+LI G+ + +F +A D M+
Sbjct: 756 LDHLTKEGNMENALQLHNAM--LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIG 813
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD +T++ I +C+ D A+ ++ M ++G P+ V FN LI + D +
Sbjct: 814 MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRAL 873
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+ +M+ G + + T L+ L R+ +
Sbjct: 874 QLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 42/357 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + ++ R+ D L +M P YN ++ G +++++A M+R+
Sbjct: 194 IDGYCRSGRLTDALRLIASM----PVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNN 249
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VTF I FC+N D A+ L +M + GC P+VV ++TL+ GF + D+ +
Sbjct: 250 CHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDAL 309
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M+ C ++V + GLC GR + EL+ + R+ P D + L+ L
Sbjct: 310 KLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSL 366
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLI---------------------------- 372
C A A+EV++++ K G +P V++ T+I
Sbjct: 367 CQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISF 426
Query: 373 ----EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+ L R + +A+ LM KMLKE + +TFN L++ LC G+ DA + L
Sbjct: 427 NAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPK 486
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY L++G++ + K +L M D+ +YN+ + GL A +
Sbjct: 487 YRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMAAR 540
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 150/353 (42%), Gaps = 40/353 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V + + + D EA R G +V Y LI+G+ + AL M
Sbjct: 160 VAGYCRDGSLWDAERVLEAARA--SGAANVVTYTALIDGYCRSGRLTDALRLIASM---P 214
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD T+N ++ G C K+++ A L REM C+PN V+F T IR F D V
Sbjct: 215 VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAV 274
Query: 281 NMAYEMIELGCEFSSVTCEILVD--------------------------------GLCNE 308
+ +M + GC V LV+ GLC
Sbjct: 275 ELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIA 334
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR + EL+ + R+ P D + L+ LC A A+EV++++ K G +P V++
Sbjct: 335 GRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSY 394
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T+I +A L+ ML + PD+++FN +L+ LC R DA L
Sbjct: 395 NTIISCFSEQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLK 451
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ + MT++IL+ + + K+ + M PD+ TY+S ++G S
Sbjct: 452 EDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFS 504
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 156/363 (42%), Gaps = 44/363 (12%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ VN F + R++D L M RP+ YN + G +D+
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML----CRPNTVCYNAALKGLCIAGRWDEVGELIAE 346
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF---- 271
MVR P+ TF+ LI+ C+N+ + A+ + +M++ G P+VVS+NT+I F
Sbjct: 347 MVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQAC 406
Query: 272 -----------------------------GERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
ER +D MA +M++ C + +T IL+
Sbjct: 407 ADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMA-KMLKEDCHTNEMTFNILI 465
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
D LC G+V A E+ + P Y L+ +G +A ++ + + ++
Sbjct: 466 DSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADI 525
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
S A ++GL + +A L+ M+ + LP+ VTFN L+ LC G A +
Sbjct: 526 FSYNA---TLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G+ PD TY+ L++GY+ + + ++ M E PD +YNS + GL
Sbjct: 583 YEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCR 639
Query: 483 ARK 485
A +
Sbjct: 640 AER 642
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 11/249 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + +A R D A E M K++ D + +N+LI+ + + A+ ++
Sbjct: 426 FNAVLKCLCRAERWYD---AAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFE 482
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + R PD+VT++ LI+GF +A LFR M C ++ S+N ++G
Sbjct: 483 LMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAA 539
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
++D+ + +M+ C + VT IL++ LC +G V +A E+ + G+ P F Y
Sbjct: 540 RWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYN 599
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ +G AL+ + + + P I+ ++++GL R + +A L+ +ML++
Sbjct: 600 ALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAEKLVTEMLRK 656
Query: 395 GILPDSVTF 403
P+ VTF
Sbjct: 657 NCTPNEVTF 665
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 14/265 (5%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P V+T NILI C ++ A + ++ G + VS NTL+ G+ + + +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
E + VT L+DG C GR+ A L+ V P + Y +++ LC
Sbjct: 176 -LEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCF 231
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR---LRKGVEASGLMEKMLKEGILPD 399
A E++ E+ + P+ + T I + L + VE L+E+M K G +PD
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVE---LLEQMPKYGCMPD 288
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V ++ L+ + GR DA L+LL ST P+ + Y+ + G R E L+
Sbjct: 289 VVIYSTLVNGFSEHGRVDDA--LKLL-STMLCRPNTVCYNAALKGLCIAGRWDEVGELIA 345
Query: 460 EMLDEGFIPDLATYNSYMDGLSNAR 484
EM+ + P+ AT+++ ++ L R
Sbjct: 346 EMVRKDCPPNDATFSTLINSLCQNR 370
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+VI C LI+ L R+ +A ++E + G D+V+ N L+ C G DA+R+
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
A G + +TY L+ GY R R + L+ M PD TYN+ + GL
Sbjct: 176 LEAARASGA-ANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231
Query: 483 ARK 485
A++
Sbjct: 232 AKQ 234
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 182/383 (47%), Gaps = 25/383 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L + R E S+L+ + +G F P F+ ++A K
Sbjct: 34 DGYTYSTLMHGLCNEGRIDEAVSLLDEMQV-------EGTFPNP---VAFNVLISALCKK 83
Query: 168 NRMNDGLLAFEAMRKLIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
++ KL+D P+ YN L++G + DKA+ +RMV ++
Sbjct: 84 GDLSRA-------SKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 136
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
P+ +TF L+ GF ++ + + + + EKG N S+++LI G F E K + G+
Sbjct: 137 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 196
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ EM+E GC+ +++ L+DGLC EG+ +A E +I+ +G P F Y L+
Sbjct: 197 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 256
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ A+ V E+ + + LI GL + K EA + ++ML GI D V
Sbjct: 257 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 316
Query: 402 TFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
++ ++ C+ +L ++L L PD +TY+IL++ + +N +++N
Sbjct: 317 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN 376
Query: 460 EMLDEGFIPDLATYNSYMDGLSN 482
MLD+G PD T + ++ L +
Sbjct: 377 TMLDQGCDPDFITCDIFLKTLRD 399
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 147/312 (47%), Gaps = 4/312 (1%)
Query: 176 AFEAMRKLIDGRPSVS---IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A E R + D R V+ Y+ L++G D+A+ D M + P+ V FN+LI
Sbjct: 19 AVEVFRGMSD-RNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLI 77
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
S C+ A L M KGC PN V++N+L+ G + K D+ +++ M+ C
Sbjct: 78 SALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV 137
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ +T LVDG GR L +++ +G +F Y L+ L EG +++
Sbjct: 138 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 197
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
E+ +KG P+ I + LI+GL R K EA + +M +G P+S T++ L+ +
Sbjct: 198 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 257
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A + + + + Y IL++G + + KE + +ML G D+
Sbjct: 258 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 317
Query: 473 YNSYMDGLSNAR 484
Y+S + G NA+
Sbjct: 318 YSSMIHGFCNAQ 329
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 125/253 (49%)
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
++ CR D A+ +FR M ++ C + +++TL+ G E + DE V++ EM G
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ V +L+ LC +G + +A +LV + +G +P + Y LV LC +G A+
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++ + +P+ I TL++G + + ++ ++ + ++G + +++ L+ L
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
G+ +L KG P+ + Y L+ G RE + E + + EM ++G P+
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245
Query: 471 ATYNSYMDGLSNA 483
TY+S M G A
Sbjct: 246 FTYSSLMWGYFEA 258
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%)
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ V + M + C T L+ GLCNEGR+ +A L+ + G P + L
Sbjct: 17 DQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVL 76
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G+ A ++VD ++ KG +P+ + +L+ GL K +A L+ +M+
Sbjct: 77 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 136
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P+ +TF L++ GR +D R+ + KG + +Y L+SG +E + + G
Sbjct: 137 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 196
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM+++G P+ Y++ +DGL K
Sbjct: 197 LWKEMVEKGCKPNTIVYSALIDGLCREGK 225
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 145/362 (40%), Gaps = 69/362 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
+ T+ +V L + + S+LN + AN C ND F V+ FVK
Sbjct: 104 NEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCV-PNDITFG---------TLVDGFVKH 153
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R DG+ ++ + R + Y+ LI+G K + + + + MV KP+ +
Sbjct: 154 GRALDGVRVLVSLEEK-GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIV 212
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++ LI G CR K D A EM+ KG PN ++++L+ G+F + + + EM
Sbjct: 213 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 272
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV--------------------- 326
+ C V IL++GLC G++ +A + RG+
Sbjct: 273 DNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 332
Query: 327 ----------------LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
P Y L+ C + + A+++++ + +G P I C
Sbjct: 333 QGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDI 392
Query: 371 LIEGLR---------------------RLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
++ LR + ++ V AS ++E ML++ +LP T+ ++
Sbjct: 393 FLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQ 452
Query: 410 LC 411
LC
Sbjct: 453 LC 454
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 16/316 (5%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKAL---------GFYDR-------MVRDRVKPDVVT 227
+D + +YN ++NG V + DKA + D MV++ V+PD +
Sbjct: 400 LDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTS 459
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F+I+I G C K DLAL LFR+M GC NV+ +N LI + +E + EM
Sbjct: 460 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMK 519
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + T + LC V A ++V + G P Y LV++LC +
Sbjct: 520 GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSA 579
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ ++G LP ++A + I+G +++ +A + + G PD V +N L+
Sbjct: 580 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 639
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C V R +A + KGL P +TY++L+ G+ + + + ++ M+ +
Sbjct: 640 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 699
Query: 468 PDLATYNSYMDGLSNA 483
P++ TY + +DGL NA
Sbjct: 700 PNVITYTTLIDGLCNA 715
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 182/456 (39%), Gaps = 96/456 (21%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T ++++ +S +F + SV N I DG + V F K
Sbjct: 233 DKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV---DG--------HVLSILVLTFSKC 281
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++ E M L R + + VLI+GFV+ DKAL + +M + PDV
Sbjct: 282 GEVDKAFELIERMEDL-GIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 340
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNV--------------------------- 260
++ LI G C K+ + AL L EM+E G +P++
Sbjct: 341 YDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDL 400
Query: 261 ------VSFNTLIRGFFGERKFDEGVNM----------------AYEMIELGCEFSSVTC 298
+ +N+++ G + D+ + + M++ + +
Sbjct: 401 DTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSF 460
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK------------------- 339
I++DGLCN G++ A L D R G Y L++K
Sbjct: 461 SIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG 520
Query: 340 ----------------LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
LC + AL++V E+ G+ P + T L++ L + ++ E
Sbjct: 521 SGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAE 580
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A + +M++EG LPD V ++ ++ + A + +G PD + Y+ L++
Sbjct: 581 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 640
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G+ + R E ++++EM+ +G +P + TYN +DG
Sbjct: 641 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDG 676
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ I+GFVK + D+AL + + PDVV +N LI+GFC+ K+ A +
Sbjct: 595 PDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDI 654
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM KG P+VV++N LI G+ D+ + M+ E + +T L+DGLCN
Sbjct: 655 LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCN 714
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A L + +G P + L+ LC G AL E+ ++ P I
Sbjct: 715 AGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGER-ETPDTIV 773
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
LI + A ++++M+ +G PD + N
Sbjct: 774 YVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 810
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 57/360 (15%)
Query: 115 IVRSLASSYRFSELHSVLNFISAN---PCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
++ L++S R E + +L + + P +++ IF C R
Sbjct: 498 LIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGC----------------LCRRE 541
Query: 172 DGLLAFEAMRKL-IDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
D A + +R++ + G P + Y +L+ K + +A F MVR+ PD+V ++
Sbjct: 542 DVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYS 601
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
I GF + K D AL +FR++ +G P+VV++NTLI GF
Sbjct: 602 AAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGF------------------- 642
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
C RV +A +++ + +G++P Y L++ C G+ A
Sbjct: 643 ----------------CKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQA 686
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ + K P+VI TTLI+GL + +A L +M +G P+ ++F L+
Sbjct: 687 FHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG 746
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G DA L + PD + Y L++ + ++ EM+ +G PD
Sbjct: 747 LCKCGWP-DAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPD 805
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 188/467 (40%), Gaps = 52/467 (11%)
Query: 48 AHHTH-LLRFLKTHLLTPTNNQIT--PSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDS 104
AH T+ L+ P N ++ S L H + + + + F WAS
Sbjct: 64 AHITNALISIFTKQPFNPDNQELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNWASDQGG 123
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F H+ T+ ++AS + ++ L+ +S + C F +
Sbjct: 124 FNHNCYTY----NAMASCLSHARQNAPLSLLSMDIVNSR------CAMSPGALGFFIRCL 173
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
+ + L F+ ++ + P+ +N L+ K D M +PD
Sbjct: 174 GSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPD 233
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMA 283
T ++ +C ++KFD AL +F E+ +G + +V+S L GE V+ A
Sbjct: 234 KYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGE------VDKA 287
Query: 284 YEMIE----LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+E+IE LG + T +L+ G + RV KA +L + G P Y L+
Sbjct: 288 FELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGG 347
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK----EG 395
LC + AL ++ E+ + G P + + LI + V+ L+E+ L+ E
Sbjct: 348 LCAKKEIEKALHLLSEMKELGIDPDIQILSKLIA---YCSEEVDIYRLIEERLEDLDTEA 404
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST-----------------KGLDPDGMTY 438
+L + +N +L L + G++VD L A T + + PD ++
Sbjct: 405 ML---LLYNSVLNGLVN-GKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSF 460
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
I++ G + +L +M+ G ++ YN+ +D LSN+ +
Sbjct: 461 SIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 507
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 160/364 (43%), Gaps = 37/364 (10%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P+M ++ V KA R +GLL M++L RPS Y +++ R+ +A
Sbjct: 110 PDMH-MYAALVKGLCKAGRGEEGLLMLRRMKEL-GWRPSTRAYAAVVDFRCWERKAKEAE 167
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M + P VVT +I+ +C+ + AL + M+ +GC PNV ++N L++GF
Sbjct: 168 EMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGF 227
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E K + + + +M G +VT +L+ G C +G + A L+ G++
Sbjct: 228 CNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQ 287
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ Y L+ LC +G A + D L +G P+ + +LI GL + K A +EK
Sbjct: 288 YTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEK 347
Query: 391 MLKEGILPDSVTFNCLLEDLCD----------VGRTVDAD-------------------R 421
M+ G PD+ T++ +E LC +G + D
Sbjct: 348 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 407
Query: 422 LRLLAST------KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
L+A T G +PD +TY + Y E R E EN++ EM G D YN+
Sbjct: 408 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 467
Query: 476 YMDG 479
MDG
Sbjct: 468 LMDG 471
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 146/313 (46%), Gaps = 1/313 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+NA+ K RM+D L E M KL +P+V YN L+ GF + KA+ ++M
Sbjct: 189 INAYCKEGRMSDALRVLELM-KLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD VT+N+LI G C + + A L R M G + ++N LI + + D+
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ + G + ++VT L++GLC G+V A + + G P + Y +E L
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + L + E+ +K PS + T +I L + R + +M+ G PD
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 427
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ + C GR +A+ + + S G+ D M Y+ L+ G+ + +++ +
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 487
Query: 461 MLDEGFIPDLATY 473
M +P+ TY
Sbjct: 488 MTSVASVPNQFTY 500
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 4/299 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP +N LI G+ + + D A +D+M DVV++ LI GFC + D A+
Sbjct: 43 RPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVE 102
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM + P++ + L++G + +EG+ M M ELG S+ +VD C
Sbjct: 103 LFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRC 158
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
E + +A E++ + +G+ P ++ C EG AL V++ + +G P+V
Sbjct: 159 WERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 218
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++G K +A L+ KM G+ PD+VT+N L+ C G A RL L
Sbjct: 219 TYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 278
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
GL D TY+ L++ ++ R + +L + + G P+ T+NS ++GL + K
Sbjct: 279 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 337
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 18/341 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +NA K R + F+++ +P+ +N LING K + D A F ++M
Sbjct: 290 YNALINALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD T++ I C+ K L EM +K P+ V++ +I ER +
Sbjct: 349 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 408
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
EM+ GC VT + C EGR+ +A ++++ S+ GV Y L
Sbjct: 409 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 468
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR--------------KGV 382
++ G A+ ++ ++ ++P+ L+ L R+R K +
Sbjct: 469 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAI 528
Query: 383 EAS---GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
E + GL + M K LP+S T++ +LE + GRT +A L L + + Y
Sbjct: 529 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYT 588
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
LV+ + + R + LV M+ GFIP L +Y + GL
Sbjct: 589 ALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGL 629
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 153/343 (44%), Gaps = 22/343 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N K+ +++ +A++ + K++ P Y+ I K + + L F
Sbjct: 325 FNSLINGLCKSGKVD---IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 381
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ VKP V + I+I + + + L + EM GCNP+VV++ T +R + E
Sbjct: 382 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 441
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E N+ EM + G ++ L+DG + G+ A ++ + +P F YF
Sbjct: 442 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 501
Query: 335 ---------GLVEKLCGEGNAGI--ALEVVD-----ELWKKGN-LPSVIACTTLIEGLRR 377
LVE + AG+ A+E+ D ++ KK LP+ ++++EG
Sbjct: 502 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 561
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA+ L+ M ++ I + + L+ C R +DA L G P M+
Sbjct: 562 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMS 621
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y L+SG E + + + + + + PD + +DGL
Sbjct: 622 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 664
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
F +R L+ R + + G K E G +D M ++ P+ T++ ++ GF
Sbjct: 501 FILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 560
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + + A L M+E + N + L+ F +++ + + MI+ G +
Sbjct: 561 EDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLM 620
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
+ + L+ GL EG+ KA E+ ++ + P + + +++ L +G++ I+ E++ L
Sbjct: 621 SYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIML 680
Query: 357 WKKGNLPSVIACTTLIEGL 375
+ PS L E L
Sbjct: 681 ERMNCRPSHQTYAMLTEEL 699
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 154/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N K R + F++M K P ++ Y L+ G+ + D MVR+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNG 371
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++PD FNILI + + +K D A+ +F +MR+ G NPNVV + T+I D+ +
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+MI+ G + + L+ GLC + KA EL+++ RG+ + +++
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C EG + ++ D + + G P +I TLI+G K EA+ L+ M+ G+ PD
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L+ C V R DA L + G+ P+ +TY+I++ G R + L
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ G +L+TYN + GL
Sbjct: 612 ITKSGTQLELSTYNIILHGL 631
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 183/409 (44%), Gaps = 19/409 (4%)
Query: 67 NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFS 126
N +T SSL+++L +D + T D T+ +++ A+
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFD------SMTKRGLEPDIATYRTLLQGYATKGALV 358
Query: 127 ELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG 186
E+H++L+ + N P+ +F+ + A+ K +++ +L F MR+ G
Sbjct: 359 EMHALLDLMVRNGIQ---------PD-HHVFNILICAYAKQEKVDQAMLVFSKMRQ--HG 406
Query: 187 -RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P+V Y +I+ K D A+ ++++M+ + + P+++ + LI G C K+D A
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L EM ++G N + FN++I E + E + M+ +G + +T L+DG
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGC 526
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G++ +A +L+ GV P Y L+ C AL + E+ G P++
Sbjct: 527 CLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNI 586
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +++GL R+ A L + K G + T+N +L LC T +A R+
Sbjct: 587 ITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 646
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
L + T++I++ + R E ++L G +PD+ TY+
Sbjct: 647 LCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y +LI + D +V+ + D +TF L+ G C +K+ A+ +
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 248 -FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE---LGCEFSSVTCEILVD 303
R M E GC P+V S+N L++G E + E + + + M + G V+ +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G EG KA + RG+LP Y ++ LC A+EV++ + K G +P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ +++ G + EA G ++KM +G+ P+ VT++ L+ LC GR+ +A ++
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ +GL+PD TY L+ GY + E L++ M+ G PD +N
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 189/427 (44%), Gaps = 52/427 (12%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
FR D TF +++ L + R S+ ++ C D +FS ++ +
Sbjct: 123 FRVDAITFTPLLKGLCADKRTSDAMDIV-LRRMTELGCIPD-VFS-------YNNLLKGL 173
Query: 165 VKANRMNDGLLAFEAMRKLIDGR-----PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
NR + A E + + D R P V YN ++NGF K + DKA Y M+
Sbjct: 174 CDENRSQE---ALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR 230
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PDVVT++ +I+ C+ + D A+ + M + G P+ +++N+++ G+ + E
Sbjct: 231 GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 290
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +M G E + VT L++ LC GR +A ++ ++RG+ P Y L++
Sbjct: 291 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350
Query: 340 LCGEG-------------NAGI----------------------ALEVVDELWKKGNLPS 364
+G GI A+ V ++ + G P+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ T+I+ L + +A E+M+ EG+ P+ + + L+ LC + A+ L L
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+G+ + + ++ ++ + +E R E E L + M+ G PD+ TYN+ +DG A
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 485 KSVRQTR 491
K T+
Sbjct: 531 KMDEATK 537
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 139/280 (49%), Gaps = 7/280 (2%)
Query: 209 ALGFYDRMVR---DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A+ Y+RM R +V P V T+ ILI CR + DL + +KG + ++F
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 266 LIRGFFGERKFDEGVNMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACELV--IDFS 322
L++G +++ + +++ M ELGC + L+ GLC+E R +A EL+ +
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192
Query: 323 RRGVLPKD-FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
R G P D Y ++ EG++ A E+ +G LP V+ +++I L + +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
+A ++ M+K G++PD +T+N +L C G+ +A + G++P+ +TY L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
++ + R E + + M G PD+ATY + + G +
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYA 352
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 9/330 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFY- 213
+ + +A R++ L F A+ ++ R + L+ G + A+
Sbjct: 95 YAILIGCCCRAGRLD---LGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM---REKGCNPNVVSFNTLIRGF 270
RM PDV ++N L+ G C + AL L M R G P+VVS+NT++ GF
Sbjct: 152 RRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF 211
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F E D+ + +EM++ G VT ++ LC + KA E++ + GV+P
Sbjct: 212 FKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 271
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y ++ C G A+ + ++ G P+V+ ++L+ L + + EA + +
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K G+ PD T+ LL+ G V+ L L G+ PD ++IL+ Y ++ +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + ++M G P++ Y + +D L
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P Y L+ C G + + + KKG I T L++GL ++ +A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 386 GL-MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLD--PDGMTYHIL 441
+ + +M + G +PD ++N LL+ LCD R+ +A + L ++A +G PD ++Y+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G+ +E + + +EMLD G +PD+ TY+S + L A+
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQ 250
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+S YN++++G K D+AL + + ++ + TFNI+I + + D A LF
Sbjct: 621 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFA 680
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
G P+V +++ + + +E ++ M E GC S +V L G
Sbjct: 681 AHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRG 740
Query: 310 RVLKA 314
+ +A
Sbjct: 741 DITRA 745
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K N ++ L F+ + L D + +N++I +KC D+A +
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNL-CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ + PDV T++++ + LF M E GC+ + N+++R
Sbjct: 683 SANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 36/339 (10%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ +V ++LIN F D + + ++ KPDVV F LI G CR K +LA G
Sbjct: 72 KYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAG 131
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +EM GC P+VV+ N+L+RG+ + K D+ + + M+ G + + I ++G C
Sbjct: 132 LLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYC 191
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG------------------------ 342
++ +A EL + S RGV+P Y L++ LC
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDIL 251
Query: 343 -----------EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+GN L + E+ ++ P ++ T +I G+ R RK +A ++ ++
Sbjct: 252 AYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRL 311
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ EG+ PD T+ L++ LC G ++A RL G P +Y++L+ G + N
Sbjct: 312 IVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDT 371
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL-SNARKSVRQ 489
L++EM D GF D T D L N +++Q
Sbjct: 372 STVVQLIHEMADRGFYADAVTRTFLKDFLPGNDSPAIKQ 410
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 158/322 (49%), Gaps = 1/322 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D L +F M + +P + +N L++ V+ ++++ + + M +K +V T +
Sbjct: 21 LDDALASFNRMLDR-NPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ FC D +F + ++G P+VV F TLI G K + + EM +
Sbjct: 80 ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
GC VTC L+ G C++G++ K ++ +G+ P + Y + C A
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+E+ DE+ +G +P+ + TLI+ L + + +A L KM G+ PD + ++ LL+
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
C G + L + + PD + Y I+++G R + K+ + +++ ++ EG PD
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319
Query: 470 LATYNSYMDGLSNARKSVRQTR 491
+ TY + +DGL + R
Sbjct: 320 VHTYTALVDGLCREGSIIEALR 341
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 153/318 (48%), Gaps = 1/318 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K + + F M+++ P V +N LI+G+ KC E D+ + M
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEM-GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R K DVVT+N LI+ FC+ + + A G F M+ +G NVV+F+T + F E
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + +M G + T L+DG C GR+ A L+ + R+GV Y L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC E A +V+ + K G + + TTLI G + +A GL+ +M +G+
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D + L++ LC+V + +A L GL+P+ + Y ++ + + E
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489
Query: 457 LVNEMLDEGFIPDLATYN 474
++ ++LD GF P+ N
Sbjct: 490 MLQKILDSGFQPNNGCLN 507
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 137/292 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N++I+ K E +A + RM PDVVTFN LI G+ + + D L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMR GC +VV++N LI F + + M G + VT VD C
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG V +A +L RG+ +F Y L++ C G A+ ++DE+ ++G +V+
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L++GL + RK EA ++ M K G+ + + + L+ + A L
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KGL+ D Y L+ G ++ E ++L+ +M + G P+ Y + MD
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDA 477
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 138/279 (49%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D++ R+ P+V TFNI+I C+ + A LF M+E GC P+VV+FN+L
Sbjct: 170 DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSL 229
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ + DE + EM GC+ VT L++ C GR+ A R GV
Sbjct: 230 IDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGV 289
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
+ + V+ C EG A+++ ++ +G + T LI+G + + +A
Sbjct: 290 MANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV 349
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+++M+++G+ + VT+ L++ LC + +A+ + + G+ + + Y L+ G+
Sbjct: 350 LLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHF 409
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ L++EM ++G D++ Y + + GL N K
Sbjct: 410 MNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 158/386 (40%), Gaps = 58/386 (15%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ + K +++ E MR+ + V YN LIN F K + A G++ M
Sbjct: 226 FNSLIDGYGKCGELDEVEQLVEEMRR-SGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R+ V +VVTF+ + FC+ A+ LF +MR +G N ++ LI G +
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV---------- 326
D+ + + EM+ G + VT +LVDGLC E +V +A +++ + GV
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 327 ------------------------LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGN 361
L D +G L++ LC A ++ ++ + G
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP----------------------D 399
P+ I TT+++ + K EA +++K+L G P D
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLD 524
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
V + LL+ G DA L+ GL D Y +SG+ N E + +
Sbjct: 525 KVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFS 584
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
EM+ G PD A YN + + R+
Sbjct: 585 EMIGHGIAPDRAVYNCLITQIPEIRE 610
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 194/452 (42%), Gaps = 34/452 (7%)
Query: 68 QITPSSLLHFLKS-KLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS---- 122
+++PS + L+S +L P F WA + H+ ++ ++ LA++
Sbjct: 105 KLSPSFVSFILRSTELQTKPDVA---IRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLD 161
Query: 123 ------YRFSELHSVLNFISANPCPCSNDGIFSCPEMERI---------------FHFAV 161
+F E+ ++ S+N S + E+ + ++F V
Sbjct: 162 SVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLV 221
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
N V + + FE M G P V YN +I G+ + + KA M V
Sbjct: 222 NGLVNSKFIESAERVFEVMENGKIG-PDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNV 280
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN--PNVVSFNTLIRGFFGERKFDEG 279
PD +T+ LI FD LGL+ EM EKG P+V S +I G + K EG
Sbjct: 281 APDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSL--VIGGLCKDGKRVEG 338
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ MI GC+ + L+D G + +A L + G+ P + Y +V
Sbjct: 339 YTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNS 398
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G ALE ++ KG + + ++LI+GL + + EA + +M+K+G PD
Sbjct: 399 LCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPD 458
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
S +N L++ L G+ +A L G D TY IL++G RE+R +E L +
Sbjct: 459 SYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWD 518
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
M+D+G P A + + GL + K R +
Sbjct: 519 LMIDKGITPTAAAFRALSTGLCLSGKVARACK 550
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDK 208
C I+ +++ K M + +L F+ M+K +G P Y V++N K D+
Sbjct: 350 CKANVAIYTALIDSNAKCGNMGEAMLLFKRMKK--EGLEPDEVTYGVIVNSLCKSGRLDE 407
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL + + V + + ++ LI G ++ + D A +F EM +KGC P+ +N LI
Sbjct: 408 ALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALID 467
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR---VLKACELVIDFSRRG 325
K DE + ++ M GC+ + T IL+ GL E R L +L+ID +G
Sbjct: 468 ALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMID---KG 524
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P + L LC G A +++DE+ G +P A +I L + + EA
Sbjct: 525 ITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEAC 583
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD-RLRLLASTKGLDPDGM 436
L + ++ G L+ L G +AD L+L+ S G+ D M
Sbjct: 584 KLADGIVDRGREIPGRVRTVLINALRKAG---NADLALKLMRSKIGIGYDRM 632
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A +A R D L A A+ + RP+ +N+L+ + + ++A GF + +
Sbjct: 182 FNALLAALSRAGRF-DELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFLEEL 240
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDVVT+N L+SG+CR K AL LF M +G P++VS L+ G +
Sbjct: 241 EEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRL 300
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ M M+ G ++ +L+ G CNE RV +A L+++ G+ + F +
Sbjct: 301 NDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFALRAV 360
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+E G L +V L K G + + + LI L + A GL + M+++G
Sbjct: 361 IESHVKVGKLLTCLNLVSPLRKYGVVIPLESYNCLIGALCEDMRPHAARGLFKWMVEDGH 420
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P +N +L+ LC DA +++ S++ + PD TY LV+ R + +G++
Sbjct: 421 SPSLEMYNMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLCRLGKSLDGKS 480
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
++ EM++ G P+ A + + G
Sbjct: 481 VMAEMIESGLQPNEAICTALVCG 503
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 136/331 (41%), Gaps = 35/331 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN L++G+ + + AL + M V+PD+V+ +L+ G C+ + + A +
Sbjct: 247 PDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDARRM 306
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M G +P+ ++++ LI G+ E++ E + EM+ G +++
Sbjct: 307 FDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFALRAVIESHVK 366
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++L LV + GV+ Y L+ LC + A + + + G+ PS+
Sbjct: 367 VGKLLTCLNLVSPLRKYGVVIPLESYNCLIGALCEDMRPHAARGLFKWMVEDGHSPSLEM 426
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+++ L + +A + +M + PD T+ L+ LC +G+++D +
Sbjct: 427 YNMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLCRLGKSLDGKSVMAEMI 486
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGE-------------------------------- 455
GL P+ LV G+ +E E
Sbjct: 487 ESGLQPNEAICTALVCGFCKEGYLDRAELILKAFVLDFQLHCNESYNALMRAYCMTRSTS 546
Query: 456 ---NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L N MLD GF+P T S + GLS +
Sbjct: 547 ESLELQNRMLDLGFVPSSETCRSLIYGLSRS 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 354 DELWKKGNL-------PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
DELW + P+ L+ L R A G +E++ ++G PD VT+N L
Sbjct: 196 DELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTL 255
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C G+ DA L + +G++PD +++ +L+ G + R + + + M+ G
Sbjct: 256 LSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGV 315
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
PD Y+ + G N ++ VR+ R
Sbjct: 316 SPDAIAYSVLIAGYCNEQR-VREAR 339
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 194/417 (46%), Gaps = 24/417 (5%)
Query: 71 PSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS 130
P++LL F + H P + R + ++ S SS LHS
Sbjct: 29 PAALLSFFRWLQTHAPPSLCSSPDLLLSLLPPLLARRKFSDAKSLLLSFISSDHRHALHS 88
Query: 131 VLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPS 189
+L + NP S P + ++ A+V AN+ + LAF+ + +LI
Sbjct: 89 LL--LRPNPA-------LSKP----LLDTSLAAYVHANQPH---LAFQLFQNELIXXXXX 132
Query: 190 VSI----YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
SI YN L+ G + D+A+ D M ++ PDVVT+N LI G + +
Sbjct: 133 XSIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGF 192
Query: 246 GLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L EM+ + G PN V+ N +++ F E K +E + +M+E G T +++G
Sbjct: 193 RLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMING 252
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G++ +A ++ + +R+G+ P ++ LC E A E+ + K+G +
Sbjct: 253 FCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILD 312
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLR 423
+ TLI G + ++ +A L E+M K GI+P V++N L+ LC G+T A D+L
Sbjct: 313 EVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLN 372
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L KGL PD ++ +I++ GY E + N+M+ F PD+ T N + GL
Sbjct: 373 ELLE-KGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGL 428
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 155/330 (46%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K +G E M+ P+ +N+++ F K + ++A +M
Sbjct: 175 YNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKM 234
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V PD T+N +I+GFC+ K A + EM KG P++ + NT++ E+K
Sbjct: 235 VESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKP 294
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + + G VT L+ G + KA +L + +RG++P Y L
Sbjct: 295 EEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPL 354
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A++ ++EL +KG +P ++C +I G +A KM+
Sbjct: 355 IRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSF 414
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T N LL LC V A +L +K D +TY+ ++S +E R E +
Sbjct: 415 KPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFD 474
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+ +M + F PD TYN+ + L++A ++
Sbjct: 475 LMTDMEVKKFEPDQYTYNAIVRALTHAGRT 504
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 148/307 (48%), Gaps = 5/307 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V F K ++N+ A +A+ K+++ P YN +INGF K + +A D M R
Sbjct: 215 VKWFGKEGKINE---ASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMAR 271
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD+ T N ++ C KK + A L + R++G + V++ TLI G+F ++ D+
Sbjct: 272 KGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDK 331
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM + G S V+ L+ GLC G+ +A + + + +G++P + ++
Sbjct: 332 ALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIH 391
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C EG A + +++ P + L+ GL R+ +A L + +
Sbjct: 392 GYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSV 451
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT+N ++ LC GR +A L K +PD TY+ +V T R +E E +
Sbjct: 452 DVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFM 511
Query: 459 NEMLDEG 465
+++ + G
Sbjct: 512 SKLSETG 518
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N++I+G+ DKA F+++MV + KPD+ T NIL+ G CR + A LF
Sbjct: 387 NIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWIS 446
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
K + +VV++NT+I E + DE ++ +M E T +V L + GR +
Sbjct: 447 KQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEE 506
Query: 314 ACELVIDFSRRGVLPKDFD------------YFGLVEKLCGEGNAGIALEVVDELWKKGN 361
A + + S G K D Y + LC +G A+++ E +KG
Sbjct: 507 AEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGV 566
Query: 362 LPSVIACTTLIEGLRRLRKGV 382
+ L++G + RK +
Sbjct: 567 SLNKYTYIKLMDGFLKRRKSI 587
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 158/327 (48%), Gaps = 6/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + R D + FE+ + DG P +NV+I G + F KAL +RM
Sbjct: 189 LNLLIARGRAQDAVALFESW--IQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTE 246
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFD 277
PD +T NIL+ G CR K+ + L R ++ G C PNVV++ ++I G+ + +
Sbjct: 247 FGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRME 306
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ +++ +M+E G ++VT +L++G + A + R P + L+
Sbjct: 307 DALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLI 366
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LKEGI 396
+ C G A+ + E+ + P+V + +I L + + EA G + ++ ++ I
Sbjct: 367 DGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADI 426
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P + +N +++ LC G+ +A+ + KG PD TY IL+ G+ + R E
Sbjct: 427 APQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAIT 486
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L ++M++ G PD T NS++ + A
Sbjct: 487 LFHKMVETGCRPDKITVNSFISCVLKA 513
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 144/284 (50%), Gaps = 7/284 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + V+ +A ++N G + +R+L DG P+V Y +I+G+ K
Sbjct: 247 FGCSPDTITHNILVDGLCRAKQVNRG---HDLLRRLQRDGVCMPNVVTYTSVISGYCKAG 303
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ AL Y+ M+ +P+ VT+N+LI+G+ + + A+ ++R++ + C P+VV+F+
Sbjct: 304 RMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFS 363
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+LI G+ + D+ + + EM + + + T I++ LC + R +A + + + R
Sbjct: 364 SLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMR 423
Query: 325 G-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A +V ++ +KG P T LI G + E
Sbjct: 424 ADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPE 483
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
A L KM++ G PD +T N + + G + D++ L+AS
Sbjct: 484 AITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIMLIAS 527
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 145/353 (41%), Gaps = 11/353 (3%)
Query: 139 PCPCSNDGIFSC--------PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV 190
PC S IFS P E+ + + ++ R D L F+ M P
Sbjct: 88 PCAGSALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDA 147
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
++ + D A+ + + + + +N L++ + A+ LF
Sbjct: 148 VFFSFVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFES 207
Query: 251 MREKGC-NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+ G +P+ SFN +I+G F + + + M E GC ++T ILVDGLC
Sbjct: 208 WIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAK 267
Query: 310 RVLKACELVIDFSRRGV-LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
+V + +L+ R GV +P Y ++ C G AL V +++ + G P+ +
Sbjct: 268 QVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTY 327
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
LI G + A + +++ PD VTF+ L++ C G+ DA R+
Sbjct: 328 NVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQ 387
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEM-LDEGFIPDLATYNSYMDGL 480
+ P+ T+ I++ ++NR E + E+ + P YN +D L
Sbjct: 388 HHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDIL 440
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 3/290 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRV-KPDVVTFNILISGFCRNKKFDLALGLFREM 251
YN L+N + A+ ++ ++D + PD +FN++I G CR F AL L M
Sbjct: 185 YNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERM 244
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGR 310
E GC+P+ ++ N L+ G ++ + G ++ + G C + VT ++ G C GR
Sbjct: 245 TEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGR 304
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A + D G P Y L+ + A+ + +L + P V+ ++
Sbjct: 305 MEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSS 364
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTK 429
LI+G R + +A + ++M + I P+ TF+ ++ LC R+ +A LR L
Sbjct: 365 LIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRA 424
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ P Y+ ++ + + +E +V +M ++G PD TY + G
Sbjct: 425 DIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIG 474
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERKFDEG 279
V P +++ +I+ CR+ + AL LF +M ++ G P+ V F+
Sbjct: 107 VPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFS--------------- 151
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLC-NEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
V G C N G + A L+ S+ G + + Y L+
Sbjct: 152 ---------------------FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLN 190
Query: 339 KLCGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
L G A A+ + E W + L P + +I+G+ R+ +A L+E+M + G
Sbjct: 191 LLIARGRAQDAVALF-ESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGC 249
Query: 397 LPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD++T N L++ LC + D LR L P+ +TY ++SGY + R ++
Sbjct: 250 SPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAL 309
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA---RKSVRQTR 491
++ N+ML+ G P+ TYN ++G A +VR R
Sbjct: 310 SVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 9/298 (3%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
M D LL A + + V YN L++G K +A +RM PDVV ++
Sbjct: 170 MADSLLQKMAASGV---KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+ G C++ K A + +MR+ +PNVV++NT++ G K D + M +M
Sbjct: 227 SFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 290 -GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC + V +VDGLC GR +A ++ +R G P Y LV LC G
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL-----PDSVTF 403
A+E V E+ +G P+ + +L+ GL + EA ++E+M G P T+
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTY 406
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
N L+ LC GR DA + ++G DPDG++Y +V G R R + E +++E+
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 167/346 (48%), Gaps = 12/346 (3%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKC 203
G S P+M + ++ + KA ++ + + E ++++I RP +Y ++ K
Sbjct: 75 GGRSTPDMV-TYSTLLSGYCKAGKVEE---SRELLKEVISRGLRPDALMYTKVVASLCKS 130
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+AL + M+R P ++TFN LISG CR K ++A L ++M G +VV++
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTY 190
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NTL+ G + E + M GC V V GLC G+VL A +++
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRD 250
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGV 382
P Y +++ LC G ALE+++++ G +V+ +T+++GL +L +
Sbjct: 251 SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA +ME M + G PD VT++ L+ LC G+ +A + +G P+ +TY LV
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370
Query: 443 SGYTRENRRKEGENLVNEMLDEGFI-----PDLATYNSYMDGLSNA 483
G R E E +V EM G P ++TYN+ + GL A
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKA 416
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 47/384 (12%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
CP F+ VN F K R D E M D +P+V YN L+ G K + +A
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 210 LGFYDRMVRD------RVKPDVVTFNILISGFCRNKKFDLALGLFRE------------- 250
+ +VRD R PD+VT++ L+SG+C+ K + + L +E
Sbjct: 65 ----EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 251 ----------------------MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
M GC P +++FNTLI G E+ + ++ +M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G + VT L+DGLC GR+ +A +L+ G P Y V LC G
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLL 407
A +V++++ + P+V+ T+++GL + K A +ME+M +G + V ++ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ LC +GRT +A + + G PD +TY LV+G + + +E V EM EG
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360
Query: 468 PDLATYNSYMDGLSNARKSVRQTR 491
P+ TY S + GL + + R
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAER 384
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R P+ VTFN L++GF + + L M + PNVVS+N L+ G +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 276 FDEGVNMAYEMIELGCEFS--SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E + +MI G + VT L+ G C G+V ++ EL+ + RG+ P Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+V LC G ALE+++E+ + G P++I TLI G R + A L++KM
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ D VT+N L++ LC GR +A++L G PD + Y V G + + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ +M D P++ TYN+ +DGL + K
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK 272
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 17/293 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+ D T+ ++ L + R E +L + A+ C P++ F V
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA---------PDVVAYSSF-VYGL 232
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR-DRVKP 223
K+ ++ D E MR P+V YN +++G K + D AL ++M D
Sbjct: 233 CKSGKVLDAHQVLEQMRD-SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+VV ++ ++ G C+ + A + M GC P+VV++++L+ G K +E V
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL-----PKDFDYFGLVE 338
EM GC+ ++VT LV GLC+ GR+ +A +V + S G P Y L+
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIG 411
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
LC G AL+ + +G P ++ +T++EGL R + ++A ++ ++
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSVS YN LI G K D AL F+ RM PD V+++ ++ G R+ + A +
Sbjct: 401 PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMI 460
Query: 248 FREMR 252
E+R
Sbjct: 461 LSEVR 465
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +I+G+ + + +KA F ++MV KPD+ T NIL+ G C D AL L
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE--LG----------CEFSS 295
F KG + V++NT+I G E +F+E ++ EM E LG C +
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALAD 381
Query: 296 V------------------------TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
TC IL+ GLC EG + A +L + +G
Sbjct: 382 AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y ++ LC EG A +++ E+ +K G +P T+I G R + +A K
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNK 501
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+++ PD T N LL LC G V A +L +KG D +TY+ ++SG +E R
Sbjct: 502 MVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 561
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+E +L+ EM ++ PD TYN+ + L++A
Sbjct: 562 FEEAFDLLAEMKEKKLGPDCYTYNAILCALADA 594
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 163/348 (46%), Gaps = 15/348 (4%)
Query: 137 ANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVL 196
+ P C + IF+ + F V N++++ + M+ P + YN +
Sbjct: 185 SKPSVCLSKAIFT-----NVIKFGVK-----NKLSEAIGLIGKMKDF-SCFPDNASYNTI 233
Query: 197 INGFVKCR--EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
++ CR + D+++ + ++ + P +T+N +I G+CR + + A +M EK
Sbjct: 234 LDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEK 293
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P++ + N L+RG E D + + I G +VT ++ GLC EGR +A
Sbjct: 294 SFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 353
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
+L+ + + + P + Y ++ L EG A + +++ +K P + C L+
Sbjct: 354 FDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLR 413
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLD 432
GL A L + +G D+VT+N ++ LC GR +A D L + GL
Sbjct: 414 GLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLV 473
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD TY+ ++ GY RE + ++ N+M+++ F PDL T N + GL
Sbjct: 474 PDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 521
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 39/319 (12%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF+ K+++ +P + N+L+ G D AL ++ + D VT+N +IS
Sbjct: 283 AFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIIS 342
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNT---------------------------- 265
G C+ +F+ A L EM EK P+ ++N
Sbjct: 343 GLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFK 402
Query: 266 --------LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
L+RG E D + + I G +VT ++ GLC EGR +A +L
Sbjct: 403 PDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDL 462
Query: 318 VIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
+ + + G++P Y ++ C EG A + +++ +K P + C L+ GL
Sbjct: 463 LAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLC 522
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
R V+A L + +G D+VT+N ++ LC GR +A L K L PD
Sbjct: 523 REGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCY 582
Query: 437 TYHILVSGYTRENRRKEGE 455
TY+ ++ R + E
Sbjct: 583 TYNAILCALADAGRMEAEE 601
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 25/314 (7%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR-------------- 237
I + I +V C A ++RM R +KP+++T N LI+ R
Sbjct: 137 ILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIF 196
Query: 238 --------NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER--KFDEGVNMAYEMI 287
K A+GL +M++ C P+ S+NT++ + R K D+ ++ E++
Sbjct: 197 TNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELL 256
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
E G +T ++ G C EG+V KA + + P F L+ LC EG
Sbjct: 257 ESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLD 316
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
AL++ + KG + T+I GL + + EA L+ +M ++ + PD T+N +L
Sbjct: 317 NALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAIL 376
Query: 408 EDLCDV-GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L D G+ A + R K PD T +IL+ G E L N + +G
Sbjct: 377 CALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGK 436
Query: 467 IPDLATYNSYMDGL 480
D TYN+ + GL
Sbjct: 437 AIDAVTYNTIISGL 450
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R + M + P + YN +I G+ + + +KA F ++M
Sbjct: 443 YNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKM 502
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD+ T NIL+ G CR AL LF KG + V++NT+I G E +F
Sbjct: 503 VEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF 562
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+E ++ EM E T ++ L + GR+
Sbjct: 563 EEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 5/327 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + +++ K M D L F+ MR+ R +V YN LING+ K F +A G
Sbjct: 86 EVTYAILIHSLCKRGMMEDALCMFDRMREK-GIRMTVYPYNSLINGYCKHNNFHQARGLL 144
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ MV + P +++ LI+G CR A+ L REM + NV +F LI GF +
Sbjct: 145 NEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKD 204
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE + ++M+E + VT ++++G C G + KA +L RG+ P ++ Y
Sbjct: 205 GNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTY 264
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ +C A A E V +L + + + T L+ G ++G A L ++ML
Sbjct: 265 RSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGF--CKEG-SAEILCKEMLA 321
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
LP+S T+NC L+ L + G A L A +G + +T++ L+ G+ + +
Sbjct: 322 GHFLPNSYTYNCFLDYLANEGELEKAKVLH-AAMLEGCLANTVTFNTLIKGFCMAGQIQG 380
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGL 480
+L+ + + GF PD +Y++ ++ L
Sbjct: 381 AIDLMQKNTESGFFPDCISYSTIINEL 407
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 3/289 (1%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N I+ K + +A + M + P+ VT+ ILI C+ + AL +F MRE
Sbjct: 55 NAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMRE 114
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
KG V +N+LI G+ F + + EM+ G S + L+ GLC +G +
Sbjct: 115 KGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLAS 174
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL + +R V + + L+ C +GN A + ++ + +P+ + +IE
Sbjct: 175 AMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIE 234
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G R+ +A L ++ML G+ PD+ T+ L+ +C + A
Sbjct: 235 GYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVL 294
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ + L+ G+ +E E L EML F+P+ TYN ++D L+N
Sbjct: 295 NSFSLTALMHGFCKEG---SAEILCKEMLAGHFLPNSYTYNCFLDYLAN 340
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G N+++ N I + ++ E + M + G + + VT IL+ LC G + A
Sbjct: 46 GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDA 105
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+ +G+ + Y L+ C N A +++E+ KG PS + + LI G
Sbjct: 106 LCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAG 165
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L R A L +M + + + TF L+ C G +A RL L P+
Sbjct: 166 LCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPN 225
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+T+++++ GY R ++ L ++MLD G PD TY S
Sbjct: 226 EVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRS 266
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+LG + + C +D L +GR +A +L + RG+ P + Y L+ LC G
Sbjct: 44 KLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMME 103
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
AL + D + +KG +V +LI G + +A GL+ +M+ +G+ P +++ L+
Sbjct: 104 DALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLI 163
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G A L + + + T+ L+SG+ ++ E L ++M++ +
Sbjct: 164 AGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLV 223
Query: 468 PDLATYNSYMDG---LSNARKSVR 488
P+ T+N ++G + N RK+ +
Sbjct: 224 PNEVTFNVMIEGYCRVGNIRKAFQ 247
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 56/312 (17%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F K M++ F M + L+ P+ +NV+I G+ + KA YD
Sbjct: 194 FTALISGFCKDGNMDEATRLFHKMMESSLV---PNEVTFNVMIEGYCRVGNIRKAFQLYD 250
Query: 215 RMVRDRVKPDVVTFNILIS-----------------------------------GFCRNK 239
+M+ + PD T+ LIS GFC+
Sbjct: 251 QMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG 310
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
++ L +EM PN ++N + E + ++ + M+E GC ++VT
Sbjct: 311 SAEI---LCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFN 366
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ G C G++ A +L+ + G P Y ++ +LC G+ A E+ +E+ K
Sbjct: 367 TLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYK 426
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P ++A T LI + G +K L GI D VT +L + +V V+
Sbjct: 427 GLKPDIVAYTILI-------RWCNIHGEFDKGL--GIYSDMVT---VLPEYPEVYNIVNK 474
Query: 420 DRLRLLASTKGL 431
R+ + + +G+
Sbjct: 475 LRVESVVAVEGV 486
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 149/328 (45%), Gaps = 33/328 (10%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+G + +E D+A + M + PD+ T++ILI+G CR K+ A L +R
Sbjct: 295 YNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLR 354
Query: 253 -EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E C PNVVS+NTLI GF + ++ + EM+ G VT L+ GLCN GR
Sbjct: 355 NEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRA 414
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A + + + +LPK Y ++ LC G A V D + G P++ +L
Sbjct: 415 SEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSL 474
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL + + +A +++M + G PD VT+ L+ LC RT +A L + + +G+
Sbjct: 475 IYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI 534
Query: 432 D--------------------------------PDGMTYHILVSGYTRENRRKEGENLVN 459
+ P Y ++ +EN E L+
Sbjct: 535 EISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLE 594
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARKSV 487
+M+ G PD +T ++ + + K+V
Sbjct: 595 DMIGAGIKPDGSTVDALVGAMCRQDKAV 622
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 187/439 (42%), Gaps = 48/439 (10%)
Query: 82 LHHHPQFTHYD--FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANP 139
+H H + D + + + D F D T+ ++ L + R SE +L + N
Sbjct: 299 IHGHCRLQEIDRAYELLEEMKSND-FVPDIFTYDILIAGLCRAKRLSEARDLLGTLR-NE 356
Query: 140 CPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLIN 198
C+ + + ++ ++ F KA R+ND F M + G+ P V Y+ LI
Sbjct: 357 DDCTPNVVS--------YNTLIDGFSKAARVNDAYQLFLEM--VTAGQHPDVVTYSTLIR 406
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
G +A + + MV ++ P V ++ +ISG CR + D A +F M GC P
Sbjct: 407 GLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQP 466
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N+ +N+LI G + + EM E GC VT L+ GLC R +AC+L
Sbjct: 467 NLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY 526
Query: 319 IDFSRRGV--------------------------------LPKDFDYFGLVEKLCGEGNA 346
+ +G+ P F Y ++E LC E N
Sbjct: 527 VRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNL 586
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++++++ G P L+ + R K V A +E+M++ G P T++ L
Sbjct: 587 AEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTL 646
Query: 407 LEDLCDVGRTVDAD-RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L L G+ +A LR L S PD + Y L++ Y+ +++ +E N++ E+ +
Sbjct: 647 LNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKW 706
Query: 466 FIPDLATYNSYMDGLSNAR 484
I + YN+ + GL R
Sbjct: 707 GIQSIVAYNTLLKGLFRTR 725
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 29/379 (7%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSN----DGIF-------SCPEMERIFHF 159
T F++ +L S +S+ PC + DG+F +C E + H
Sbjct: 162 TCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHT 221
Query: 160 AV----------NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
A+ N VKA ++ + + M P+++ Y +I G K + KA
Sbjct: 222 AIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV-----PTLANYTSVIGGHCKAGDMGKA 276
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M R + D +T+N LI G CR ++ D A L EM+ P++ +++ LI G
Sbjct: 277 YHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAG 336
Query: 270 FFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
++ E ++ + E C + V+ L+DG RV A +L ++ G P
Sbjct: 337 LCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP 396
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L+ LC G A A ++E+ K LP V +++I GL R + AS +
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVF 456
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST-KGLDPDGMTYHILVSGYTR 447
+ M+ G P+ +N L+ LC GR DA +LR+ T +G PDG+TY L+ G R
Sbjct: 457 DSMVANGCQPNLAVYNSLIYGLCKTGRLCDA-KLRVKEMTERGCSPDGVTYGTLIVGLCR 515
Query: 448 ENRRKEGENLVNEMLDEGF 466
+R E +L L++G
Sbjct: 516 WSRTDEACDLYVRSLEQGI 534
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y +LI G + A Y+ MV ++P V+T L++ C++ +LAL
Sbjct: 123 PDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRY 182
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M C ++ LI G F + DE EM ++ T ++++GL
Sbjct: 183 FEKMSSIPC---AATWTILIDGLFRAIRVDEACYYFEEMKHTAIP-NNWTYTVVINGLVK 238
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V +A ++ + +P +Y ++ C G+ G A +++++ +KG +
Sbjct: 239 AGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLT 294
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLA 426
TLI G RL++ A L+E+M +PD T++ L+ LC R +A D L L
Sbjct: 295 YNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLR 354
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ P+ ++Y+ L+ G+++ R + L EM+ G PD+ TY++ + GL NA ++
Sbjct: 355 NEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRA 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 156/420 (37%), Gaps = 82/420 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++R L ++ R SE HS L + P++ ++ ++ +A
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKI---------LPKVP-VYSSVISGLCRA 446
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ F++M + +G +P++++YN LI G K A M PD V
Sbjct: 447 GELDAASTVFDSM--VANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGV 504
Query: 227 TFNILISGFCRNKKFDLALGLFR-------EMREKGCN---------------------- 257
T+ LI G CR + D A L+ E+ E CN
Sbjct: 505 TYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLAT 564
Query: 258 ---PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P + T+I E E + +MI G + T + LV +C + + + A
Sbjct: 565 GNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVA 624
Query: 315 CELVIDFSRRG------------------------------------VLPKDFDYFGLVE 338
+ + R G P + Y GL+
Sbjct: 625 MAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIA 684
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ A V+ EL K + S++A TL++GL R R L+ +M + +
Sbjct: 685 AYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVV 744
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ TFN L++ C +G+T A R+ L K L P LV R R +E ++LV
Sbjct: 745 NEATFNILIQGFCRLGQTDRAVRV-LSEMKKVLTPSAAIIKFLVDELARAEREQESKDLV 803
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
R + V T+N R + + A LF+E + P+ +++ LIRG K
Sbjct: 83 RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGL 336
++ EM++ G +TC+ L++ LC G + EL + F + +P + L
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNL----ELALRYFEKMSSIPCAATWTIL 198
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L A +E+ K +P+ T +I GL + K EA E++L+E
Sbjct: 199 IDGLFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEA----ERVLQEMP 253
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P + ++ C G A L KG D +TY+ L+ G+ R
Sbjct: 254 VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYE 313
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM F+PD+ TY+ + GL A++
Sbjct: 314 LLEEMKSNDFVPDIFTYDILIAGLCRAKR 342
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++NR+ G L MRK + P+ YN LINGF + A + M
Sbjct: 266 YNMLIHDLCRSNRIAKGYLLLRDMRKRMI-HPNEVTYNTLINGFSNEGKVLIASQLLNEM 324
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTFN LI G F AL +F M KG P+ VS+ L+ G +F
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D M G +T ++DGLC G + +A L+ + S+ G+ P Y L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A E+V +++ G P+ I +TLI R+ EA + E M+ EG
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D TFN L+ LC G+ +A+ ++ G+ P+ +++ L++GY + +
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +EM G P TY S + GL
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGL 588
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 6/318 (1%)
Query: 177 FEAMRKLIDGRPS------VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
F+A +L+D S V YN+LI+ + K M + + P+ VT+N
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+GF K +A L EM G +PN V+FN LI G E F E + M Y M G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
S V+ +L+DGLC A + R GV Y G+++ LC G A+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++E+ K G P ++ + LI G ++ + A ++ ++ + G+ P+ + ++ L+ +
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +G +A R+ +G D T+++LV+ + + E E + M +G +P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 471 ATYNSYMDGLSNARKSVR 488
+++ ++G N+ + ++
Sbjct: 544 VSFDCLINGYGNSGEGLK 561
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 11/344 (3%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID---------GRPSVSIYNVL 196
GI+ +M+ + H V N M DG + K D G P+++ YN+L
Sbjct: 703 GIYFREQMDNLGH--TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
++G+ K ++ + Y ++ + + PD +T + L+ G C + ++ L + + +G
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
+ +FN LI + + ++ M LG TC+ +V L R ++
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
++ + S++G+ P+ Y GL+ LC G+ A V +E+ P +A + ++ L
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ K EA+ L+ MLK ++P +F L+ C G ++A LR++ S GL D +
Sbjct: 941 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y++L++G + L EM +GF+ + TY + + GL
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 142/333 (42%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLIN-----------------------------------GFVKCREFDKALGF 212
P V+ +N+LIN + K F A+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D M V DV T+N+LI CR+ + L R+MR++ +PN V++NTLI GF
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E K + EM+ G + VT L+DG +EG +A ++ +G+ P +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC +A + + G I T +I+GL + EA L+ +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+GI PD VT++ L+ C VGR A + GL P+G+ Y L+ R K
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + M+ EG D T+N + L A K
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS Y VL++G K EFD A GFY RM R+ V +T+ +I G C+N D A+ L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G +P++V+++ LI GF +F + + +G + + L+ C
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + G F + LV LC G A E + + G LP+ ++
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G +G++A + ++M K G P T+ LL+ LC G +A++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
D + Y+ L++ + + +L EM+ +PD TY S + GL K+V
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 168/436 (38%), Gaps = 98/436 (22%)
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLA-----SSYRFSELHSVLNFISAN 138
H Q HI A D RH I++ L+ SS+ F L + ++N
Sbjct: 70 HIVQLVCITTHILVRARMYDPARH-------ILKELSLMSGKSSFVFGALMTTYRLCNSN 122
Query: 139 PCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLIN 198
P ++ + +++ + D L F M L PSV N ++
Sbjct: 123 P---------------SVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILG 166
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
VK E F M++ ++ PDV TFNILI+ C F+ + L ++M + G P
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 226
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+V++NT++ + + +F + + M G + T +L+ LC R+ K L+
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 286
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
D +R + P + Y TLI G
Sbjct: 287 RDMRKRMIHPNEVTY-----------------------------------NTLINGFSNE 311
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K + AS L+ +ML G+ P+ VTFN L++ G +A ++ + KGL P ++Y
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371
Query: 439 HILVSG-------------YTRENRR----------------------KEGENLVNEMLD 463
+L+ G Y R R E L+NEM
Sbjct: 372 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 431
Query: 464 EGFIPDLATYNSYMDG 479
+G PD+ TY++ ++G
Sbjct: 432 DGIDPDIVTYSALING 447
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K +++ ++ M K DG P + Y+ LINGF K F A R+ R
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSK--DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+ + ++ LI CR A+ ++ M +G + +FN L+ K E
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M G ++V+ + L++G N G LKA + + ++ G P F Y L++
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+ A + + L + TL+ + + +A L +M++ ILPD
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDPDGMTYHILVSGYTRENRRKEGENLV 458
S T+ L+ LC G+TV A A +G + P+ + Y V G + + K G
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+M + G PD+ T N+ +DG S K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ IY+ LI + +A+ Y+ M+ + D TFN+L++ C+ K A
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M G PN VSF+ LI G+ + + ++ EM ++G + T L+ GLC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + + Y L+ +C GN A+ + E+ ++ LP
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG-ILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI GL R K V A ++ G +LP+ V + C ++ + G+ R
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +T + ++ GY+R + ++ +L+ EM ++ P+L TYN + G S RK
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK-RKD 769
Query: 487 VRQT 490
V +
Sbjct: 770 VSTS 773
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NVL+ K + +A F M D + P+ V+F+ LI+G+ + + A +F EM
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G +P ++ +L++G E + + +V L+ +C G +
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTL 371
KA L + +R +LP + Y L+ LC +G IA+ E +GN LP+ + T
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
++G+ + + E+M G PD VT N +++ +G+ + L +
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+ GY++ L ++ G +PD T +S + G+
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +Y ++G K ++ + F ++M PD+VT N +I G+ R K + L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + PN+ ++N L+ G+ + + +I G +TC LV G+C
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +++ F RGV + + L+ K C G A ++V + G
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C ++ L R + E+ ++ +M K+GI P+S + L+ LC VG A ++
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ P + +V + + E L+ ML +P +A++ + M
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
CN N ++ LIR + E + + + M G S TC ++ + G +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ + +R + P + L+ LC EG+
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFE---------------------------- 210
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
++S LM+KM K G P VT+N +L C GR A L +KG+D D
Sbjct: 211 -------KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY++L+ R NR +G L+ +M P+ TYN+ ++G SN K
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V A K + ++ LL F KL+ P+++ + L++ K +AL M
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLV---PTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K D+V++N+LI+G C LA L+ EM+ G N ++ LIRG
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1052
Query: 279 GVNM 282
G ++
Sbjct: 1053 GADI 1056
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T +V L ++RF E VL+ +S GI PE R + +N +
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLHEMS-------KQGI--SPE-SRKYIGLINGLCRV 907
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + E M P+V+ + ++ KC + D+A M++ ++ P + +
Sbjct: 908 GDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F L+ C+N AL L M G ++VS+N LI G + + EM
Sbjct: 967 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVI-DFSRRGVL 327
G ++ T + L+ GL ++++ D RG +
Sbjct: 1027 GDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + + + LL F +R + PSV YN LI+G + D A G D M
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSK-NLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDM 408
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + PDVVTF IL+ GFC+ +A LF EM +G P+ +++ T I G
Sbjct: 409 IKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNP 468
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M EM G +T +L++GLC G A ELV G++P Y +
Sbjct: 469 SKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSI 528
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ G A EV ++ KKG PSV+ T LI + A ++M +G+
Sbjct: 529 IHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ +T+N L+ LC A L +KG+ P+ TY IL++ + ++
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALK 648
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L +MLD PD T+++ M LS K
Sbjct: 649 LYKDMLDREIKPDSCTHSALMKHLSKDYK 677
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 151/327 (46%), Gaps = 1/327 (0%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
+F C + ++ VN + E M ++ + S YN LI GF K F
Sbjct: 235 MFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQM-SMLGLKVSAHTYNPLIRGFCKKEMF 293
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
++A M+ P VVT+N ++ CR + A M + P++VS+NTL
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ F E + + E+ S VT L+DG C G + A + D + G+
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGL 413
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + LV C GN +A E+ DE+ +G P IA TT I G +L +A G
Sbjct: 414 CPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFG 473
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
+ E+M EG PD +T+N L+ LC +G DA+ L +G+ PD +TY ++ +
Sbjct: 474 MKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHL 533
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATY 473
++ E + ++ML +G P + TY
Sbjct: 534 ISGLLRKAEEVFSDMLKKGIHPSVVTY 560
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y M++ +++P +VTFN ++ C+ + A+ + MR GC+PN VS+N L+ G G
Sbjct: 195 YSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSG 254
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ +FD + +M LG + S+ T L+ G C + +A +L + RG LP
Sbjct: 255 KGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ LC G A +D + + +P +++ TLI G RL EA L ++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ ++P VT+N L++ C G A ++ GL PD +T+ ILV G+ +
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L +EML G PD Y + + G
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVG 461
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 1/319 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +++ K + + + MR + P+ YNVL+NG EFD+A ++M
Sbjct: 210 FNTMMDSRCKEGEVGRAVEVLDVMR-MFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQM 268
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+K T+N LI GFC+ + F+ A L REM +G P VV++NT++ +
Sbjct: 269 SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRV 328
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M+ V+ L+ G G +A L + + ++P Y L
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C GN IA + D++ K G P V+ T L+ G ++ A L ++ML G+
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL 448
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD + + + +G A ++ +G PD +TY++L++G + +
Sbjct: 449 KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANE 508
Query: 457 LVNEMLDEGFIPDLATYNS 475
LV +M EG +PD TY S
Sbjct: 509 LVQKMRLEGIVPDHVTYTS 527
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 180/415 (43%), Gaps = 36/415 (8%)
Query: 71 PSSLLHFLKS-KLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
PSS F K+ L P H+ F+ F+ ID+ + H S + F L
Sbjct: 7 PSSTTFFSKTITLFLKP---HFRFYPFSTNPQIDNSVNPH------FHSAVTQPEF--LL 55
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM--NDGLL--AFEAMRKLID 185
VLN + P F E + FH + AFV + +G + A+ M K I+
Sbjct: 56 RVLNSVKHRPLTALR--FFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIE 113
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
+ + +VL+ + C + V ++LI F + + L
Sbjct: 114 VKVDGGVLDVLVG--IGCGRNSEV--------------SVKLLDLLIQVFAKKLILEKCL 157
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+F +M G P+V + N +++ + +E + MI+ + VT ++D
Sbjct: 158 MVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSR 217
Query: 306 CNEGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C EG V +A E V+D R G P D Y LV L G+G A E+++++ G S
Sbjct: 218 CKEGEVGRAVE-VLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVS 276
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
LI G + EA+ L +ML G LP VT+N ++ LC +GR DA R
Sbjct: 277 AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLD 336
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + L PD ++Y+ L+ GY+R E L +E+ + +P + TYN+ +DG
Sbjct: 337 VMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDG 391
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV Y VLI+ + D A ++D M V P+V+T+N LI G C+ D+A L
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNL 614
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG +PN ++ LI + + + + + +M++ + S T L+ L
Sbjct: 615 FAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674
Query: 308 EGRVLKACEL 317
+ ++L L
Sbjct: 675 DYKLLAVLRL 684
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 4/231 (1%)
Query: 255 GCNPN----VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
GC N V + LI+ F + ++ + + Y+M+ G C ++ L ++
Sbjct: 128 GCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSM 187
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V + E+ + + P + +++ C EG G A+EV+D + G P+ ++
Sbjct: 188 VNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV 247
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ GL + A L+E+M G+ + T+N L+ C +A+ LR +G
Sbjct: 248 LVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRG 307
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
P +TY+ ++ R R + ++ M++E +PDL +YN+ + G S
Sbjct: 308 ALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYS 358
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 174/367 (47%), Gaps = 40/367 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I++ ++ K RMND F+ M R+L+ PS+ YN LI+G+ K +K+
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLL---PSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM D ++P ++TFN L+ G + + A + +EM++ G P+ +F+ L G+
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV--------------- 318
K + + + ++ G + ++ TC IL++ LC EG++ KA E++
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 319 ---ID-----------------FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
ID ++G+ P Y L+ + C G A + V+++
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG PSV LI G R + + ++++M G +P+ V++ L+ LC + ++
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ +G+ P Y++L+ G + + ++ EML +G +L TYN+ +D
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 479 GLSNARK 485
GLS K
Sbjct: 573 GLSMTGK 579
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 35/336 (10%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D RPS +Y I VK + K L ++RM DR+ P V +N+LI G C+ K+ + A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 245 LGLFREM-------------------------------REK----GCNPNVVSFNTLIRG 269
LF EM RE+ P++++FNTL++G
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F ++ N+ EM +LG + T IL DG + + A + GV
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ L+ LC EG A E++ KG +P+ + T+I+G R V A +E
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M K+G+ PD + +NCL+ C++G +A++ KG+ P TY+IL+ GY R+
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +++ EM D G +P++ +Y + ++ L K
Sbjct: 474 EFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 31/336 (9%)
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
KL PSV YN+LI G+ + EFDK M + P+VV++ LI+ C+ K
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
A + R+M ++G +P V +N LI G + K ++ + EM++ G E + VT L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGL G++ +A +L+++ SR+G+ P F Y L+ GN + + +E+ + G
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 362 LPSVIACTTLI-----EGLRRLRK---------------GV-----------EASGLMEK 390
P++ LI EG+ + GV +A L ++
Sbjct: 631 KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+++ I D T+N L+ VG+ + L + + ++P+ TY+I+V G+
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
EM ++GF+ D+ N + GL +S
Sbjct: 751 YMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 154/320 (48%), Gaps = 11/320 (3%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+NA K ++ +L E + L+ P+ IYN +I+G+ + + A + M +
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLV---PNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD + +N LI FC + + A +M+ KG +P+V ++N LI G+ + +FD+
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM + G + V+ L++ LC ++L+A + D RGV PK Y L++
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G A E+ KKG +++ TLI+GL K EA L+ ++ ++G+ P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N L+ G L G+ P TYH+L+S T KEG L
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT-----KEGIELT 652
Query: 459 NEMLDE-GFIPDLATYNSYM 477
+ E PDL YN +
Sbjct: 653 ERLFGEMSLKPDLLVYNGVL 672
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 2/282 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+N K + +KA R + + P+ V +N +I G+CR A M +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P+ +++N LIR F + + +M G S T IL+ G + K
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD-ELWKKGNLPSVIACTTLI 372
+++ + G +P Y L+ LC +G+ + ++V ++ +G P V LI
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLC-KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G K +A ++MLK+GI + VT+N L++ L G+ +A+ L L S KGL
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
PD TY+ L+SGY + L EM G P L TY+
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%)
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E ++ + + G SS + +L+D L + + ++ P F Y
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ + G LE+ + + PSV LI+GL + ++ +A L ++ML
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+LP +T+N L++ C G + ++R ++P +T++ L+ G + ++
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
EN++ EM D GF+PD T++ DG S+ K+
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 176 AFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF +++I+ + + YN LI G +K + + D M ++P+ T+NI++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
G C K + A +REM+EKG +V N L+ G E + E + EM
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + +YN +++ + + +KA +M+ + D T+N LI G + K
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM + P ++N +++G + + EM E G LV GL
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLK 781
Query: 307 NEGRVLKACELVI 319
E R K E+VI
Sbjct: 782 EEWRS-KEAEIVI 793
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 189/414 (45%), Gaps = 42/414 (10%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER----- 155
T +FRH ++ ++ L + E +++ + + S +F+ +
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRS 64
Query: 156 ---IFHFAVNAFVKANRMNDGL------------LAFEAMRKLID--------------- 185
+F + A++++ + D + + F+ RK+++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 186 ------GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
G P S+ +N+L++ FVK E A +D + + ++P VV+FN L++G+ +
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ L M+ G P+V +++ LI G E K D+ + EM++ G + VT
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L+DG C GRV A E+ + + P Y L+ LC +G+ A +++DE+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG P TTLI+G + A ++M+KE I D V + L+ LC GR+VD
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
A+++ + GL P+ TY ++++ + ++ G L+ EM +G+ P + T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%)
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ ++ D+ F+ LI+ + + A+ +R +E + ++ + F
Sbjct: 59 KGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFK 118
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E +E G S IL+ EG + A + ++ G+ P + L+
Sbjct: 119 LVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLM 178
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
G+ + + + G P V + LI GL + K +A+ L ++ML +G++
Sbjct: 179 NGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV 238
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 298
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
++EM+ +G PD TY + +DG
Sbjct: 299 IDEMIMKGLKPDKFTYTTLIDG 320
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KGL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 155/328 (47%), Gaps = 13/328 (3%)
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKP 223
+K R N F+ M P +N+LI GF K D+ F+ M R + P
Sbjct: 201 LLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDP 260
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGC--NPNVVSFNTLIRGFFGERKFDEGVN 281
D+VT+N L+ G CR K ++A + M +K NP+VV++ TL+RG+ + + DE +
Sbjct: 261 DLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALV 320
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKL 340
+ EM+ G + + +T L+ GLC ++ K ++ G +P L+
Sbjct: 321 VFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAH 380
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL--- 397
C GN ALEV +++ P + LI L + A L +++ ++ IL
Sbjct: 381 CNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRD 440
Query: 398 ----PDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRK 452
P + + E LC G+T A+R+ R L DP +++ IL+ G+ RE +
Sbjct: 441 DGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDP--LSFKILIKGHCREGTFE 498
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
G L+ ML F+PDL TY S +DGL
Sbjct: 499 AGYELLVLMLRRDFVPDLETYQSLIDGL 526
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 14/335 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + F K + +++G F+ M + P + YN L++G + + + A + M
Sbjct: 230 FNILIRGFCKNSMVDEGFRFFKEMSRF-KCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGM 288
Query: 217 VRD--RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
V+ + PDVVT+ L+ G+C + D AL +F EM KG PN +++NTLI+G +
Sbjct: 289 VKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQ 348
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEI--LVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
K D+ + +E G F TC + L++ CN G + A E+ V P
Sbjct: 349 KIDK-IKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSAT 407
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKK-------GNLPSVIACTTLIEGLRRLRKGVEAS 385
Y L+ LC GN A ++ DEL +K G P V A ++ E L R K +A
Sbjct: 408 YSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAE 467
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ +++K G D ++F L++ C G L +L + PD TY L+ G
Sbjct: 468 RVFRQLMKRGT-QDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGL 526
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ + +M+ +P+ +T++S + L
Sbjct: 527 LQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARL 561
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 140/310 (45%), Gaps = 11/310 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N LI + K F +++ ++ M V P VVTFN L+ + + ++A +F EM
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 253 EK-GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G P+ +FN LIRGF DEG EM C+ VT LVDGLC G+V
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278
Query: 312 LKACELVIDFSRRG--VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
A +V ++ + P Y LV C + AL V +E+ KG P+ I
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338
Query: 370 TLIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TLI+GL ++K + + E L G +PD+ T N L+ C+ G DA +
Sbjct: 339 TLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMV 398
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNE-------MLDEGFIPDLATYNSYMDGLS 481
+ PD TY +L+ + + E L +E + D+G P +A Y S + L
Sbjct: 399 LNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLC 458
Query: 482 NARKSVRQTR 491
K+ + R
Sbjct: 459 RNGKTAKAER 468
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA---CTTLIEGLRRLRKG 381
G D YF ++E L N +A + + ++ N + +LI +
Sbjct: 113 GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLF 172
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHI 440
E+ + M G+ P VTFN LL L GRT A + + ST G+ PD T++I
Sbjct: 173 QESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNI 232
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ G+ + + EG EM PDL TYN+ +DGL A K
Sbjct: 233 LIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 172/365 (47%), Gaps = 17/365 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLN-FISANPCPCSNDGIFSCPEMERIFHFAVNAFVK 166
D T+ +V L + +F+E + + + P +FSC + + K
Sbjct: 297 DVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKP----DVFSCGAL-------IFGLCK 345
Query: 167 ANRMNDGLLAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
N++++ AFE +++ D SV IYN LI+GF + DKA M + +PD
Sbjct: 346 NNKVDE---AFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPD 402
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+VT+NIL++ +C + A L R+M G NP+ S+N L++G + D+
Sbjct: 403 IVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVS 462
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+ +E+G +V+C IL+D C +V A EL + +G+ Y L+ L G
Sbjct: 463 DHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVG 522
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+A E+ +++ P+V ++ L ++ A + M+++ + PD+VTFN
Sbjct: 523 YYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFN 582
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ L R ++A L T+G++PD +T+ L+SG E + + M++
Sbjct: 583 TLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMEN 642
Query: 465 GFIPD 469
G I D
Sbjct: 643 GIILD 647
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 11/377 (2%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ + +L S R + +L + + CS D I++C + + K NR+
Sbjct: 230 TYSRWISALCQSNRIELVQELL--VDMDKLGCSPD-IWAC-------NIYIYYLCKQNRL 279
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
D L E MR P V Y +++G ++F +A+G ++ MV+ +KPDV +
Sbjct: 280 PDALQMVEKMRTK-GTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGA 338
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI G C+N K D A L M +V +N LI GF+ D+ + M G
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
CE VT IL++ C G + KA +L+ GV P + Y L++ LC A
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAF 458
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
V + + G ++C LI+ + +K A L ++M +G+ D+VT+ L+ L
Sbjct: 459 AFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGL 518
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
VG A+ L +DP+ Y+I++ + K + + + M+ + PD
Sbjct: 519 FSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDT 578
Query: 471 ATYNSYMDGLSNARKSV 487
T+N+ + L +++
Sbjct: 579 VTFNTLIYWLGKRSRAI 595
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S+Y +L++G+V+ +FD + +D MV + V +N I +N FDL +
Sbjct: 159 SLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDM 218
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
KG +++ I + + + +M +LGC C I + LC + R
Sbjct: 219 ALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNR 278
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ A ++V +G P Y +V LC A+ + +E+ K+ P V +C
Sbjct: 279 LPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGA 338
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + K EA L +ML I +N L+ G A ++ T G
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+PD +TY+IL++ Y ++ E L+ +M G PD +YN + GL +
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQ 453
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 163/391 (41%), Gaps = 13/391 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
+ WA + F H ++V L F+ L L + + G+ + R
Sbjct: 110 YWWAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQ-------GVALHRSLYR 162
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYD 214
I ++ +V+A + + + F+ M ++ G + YN I VK FD +YD
Sbjct: 163 IL---LSGYVRAGKFDSVIETFDEM--VMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYD 217
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ T++ IS C++ + +L L +M + GC+P++ + N I +
Sbjct: 218 MALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQN 277
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + M +M G VT + +V GLC+ + +A L + +R + P F
Sbjct: 278 RLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCG 337
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC A E+ + SV LI G R +A ++ M
Sbjct: 338 ALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTN 397
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD VT+N LL C +G A++L T G++PD +Y+ L+ G + ++ +
Sbjct: 398 GCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKA 457
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
V++ ++ G D + N +D +K
Sbjct: 458 FAFVSDHMEVGGFCDTVSCNILIDAFCKTKK 488
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 3/296 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ F +A ++ MR +G P + YN+L+N + +KA
Sbjct: 370 IYNALISGFWRAGSIDKAYKIISFMRT--NGCEPDIVTYNILLNHYCTIGMMEKAEKLIR 427
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M V PD ++N L+ G C+ + D A + E G + VS N LI F +
Sbjct: 428 KMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTK 487
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + + EM G + +VT L++GL + G A EL + P Y
Sbjct: 488 KVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYN 547
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ LC G+ A + + +K P + TLI L + + +EA L + M
Sbjct: 548 IMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTR 607
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
G+ PD++TF L+ L D G++ A + G+ D L+S +N+
Sbjct: 608 GVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKSKNK 663
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 150/324 (46%), Gaps = 18/324 (5%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E MRK P S Y +I + + DKA + M + V PDV T+ ILI FC+
Sbjct: 442 EMMRKGF--VPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCK 499
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ A F EMR GC+PNVV++ L+ + ++ + ++ + M+ C +++T
Sbjct: 500 AGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAIT 559
Query: 298 CEILVDGLCNEGRVLKACELVI-----------DFSRRG-----VLPKDFDYFGLVEKLC 341
L+DGLC G + KACE+ DF G + P Y LV LC
Sbjct: 560 YSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLC 619
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A +++D + G P+ I L++G ++ + A + +M K G LP
Sbjct: 620 KAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVH 679
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+ L++ + GR A ++ +P+ +TY +V G + ++ NL++ M
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLM 739
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
+G P++ TY + +DGL A K
Sbjct: 740 EKKGCSPNVVTYTALIDGLGKAGK 763
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 162/342 (47%), Gaps = 17/342 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +++F KA + F+ MR P+V Y L++ ++K ++ +A + RM
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRS-AGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN----------------PNV 260
V D P+ +T++ LI G C+ + A ++ ++ N PNV
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNV 608
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++ L+ G +K + ++ M+ GCE + + + LVDG C G + A E+ +
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLR 668
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
++ G LP Y L++++ +G +A++V+ ++ K P+V+ T +++GL + +
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L+ M K+G P+ VT+ L++ L G+ L + TKG P+ +TY I
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRI 788
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
L++ + L++EM + L Y + + G S
Sbjct: 789 LINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK 830
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 10/325 (3%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN KA +++D +AM L G P+ +Y+ L++GF K E D A + RM +
Sbjct: 615 VNGLCKAQKVSDAHDLLDAM--LAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P V T+ LI ++ + DLA+ + +M + CNPNVV++ ++ G + ++
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKA 732
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+N+ M + GC + VT L+DGL G+V EL + +G P Y L+
Sbjct: 733 LNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINH 792
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVI-ACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C G A ++DE+ K+ + P + T ++G + + + + GL+E+M P
Sbjct: 793 CCAAGLLDDAHLLLDEM-KQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAP 849
Query: 399 DSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHI-LVSGYTRENRRKEGE 455
+ + L++ GR A L ++ + L+ H L+ ++ +E
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAV 909
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L +EM G +PDL+ + + GL
Sbjct: 910 ALYSEMRRRGIVPDLSAFVCLVKGL 934
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 164/386 (42%), Gaps = 22/386 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+R T+ +V+ LAS+ + V +SA+ C + + FA A
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG---------FCMDRSTVGSFA-QAL 249
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K R D L E D + + +I+G ++ F++A+ F RM + P+
Sbjct: 250 CKEGRWGDALDLLERE----DFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPN 305
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVT+ L++GF + K+ + M +GCNP+ FN+L+ + + +
Sbjct: 306 VVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFN 365
Query: 285 EMIELGCEFSSVTCEILVDGLCNEG-----RVLKACELVID--FSRRGVLPKDFDYFGLV 337
M GC V I + +C +L E V + VL K +
Sbjct: 366 RMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNK-INTANFA 424
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LCG G A ++V E+ +KG +P T +I L + ++ +A L ++M K G+
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD T+ L++ C G A + G P+ +TY L+ Y + + + ++
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNA 483
+ M+ + P+ TY++ +DGL A
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKA 570
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 22/315 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF------ 241
PS S++N L++ + ++ A ++RM P V +NI I C ++
Sbjct: 339 PSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELL 398
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
DLA ++ EM C N ++ R G KF++ + EM+ G + T +
Sbjct: 399 DLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKV 458
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ LC RV KA L + + GV P + Y L++ C G A DE+ G
Sbjct: 459 ITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGC 518
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V+ T L+ + ++ +A+ + +M+ + P+++T++ L++ LC G A
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578
Query: 422 L--RLLAS--------------TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+ +L+ + T + P+ +TY LV+G + + + +L++ ML G
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG 638
Query: 466 FIPDLATYNSYMDGL 480
P+ Y++ +DG
Sbjct: 639 CEPNQIVYDALVDGF 653
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 47/369 (12%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
D+ + T+ +V L + + S+ H +L+ + A C + ++ V+
Sbjct: 602 DTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAA----------GCEPNQIVYDALVD 651
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F K ++ F M K PSV Y LI+ K D A+ +M++D
Sbjct: 652 GFCKVGEIDSAQEVFLRMTK-CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCN 710
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+VVT+ ++ G C+ + + AL L M +KGC+PNVV++ LI G K D G+ +
Sbjct: 711 PNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLEL 770
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEG--------------------------------- 309
+M GC + VT IL++ C G
Sbjct: 771 FMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK 830
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG---NLPSVI 366
R L + L+ + P Y L++ G ALE+ E+ + N+ S
Sbjct: 831 RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD 890
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+ L + EA L +M + GI+PD F CL++ L + + +A +L
Sbjct: 891 MHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGI 950
Query: 427 STKGLDPDG 435
+G++ +G
Sbjct: 951 CQEGVNWEG 959
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 120/327 (36%), Gaps = 66/327 (20%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ +G DR V R+ N+L+ C + AL +++ G P+ V++N L+
Sbjct: 158 REIGEDDRDVLGRL------LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALV 211
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+ + + + EM G T LC EGR A +L+
Sbjct: 212 QVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLL--------- 262
Query: 328 PKDFDYFGLVEKLCGEGNAGI--------ALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ + F L LC + +G+ A+ + + +P+V+ TL+ G + +
Sbjct: 263 --EREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKK 320
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ ++ M+ EG P FN L+ C+ A +L +T G P + Y+
Sbjct: 321 QLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYN 380
Query: 440 ILVSGYT-RE----------------------------------------NRRKEGENLV 458
I + RE + ++ +V
Sbjct: 381 IFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIV 440
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
EM+ +GF+PD +TY + L A++
Sbjct: 441 KEMMRKGFVPDASTYTKVITFLCQAKR 467
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 5/293 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN +++ +VK F A+ + M ++ V+ DV T+NI+I C+ K+ A L
Sbjct: 257 PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLL 316
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ MR P+ ++NTLI+GFF E K +++ EM+ G + S T L+DG C
Sbjct: 317 LKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCR 376
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A ++ + GV P + Y ++ G+ A V D + K G P V
Sbjct: 377 NGTIDEALRVLYEMQVAGVKPSEVTYSAML-----NGSVHEAFSVYDNMEKYGCSPDVYT 431
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ GL + V+A M ++ D T N LL +C+ G +A L
Sbjct: 432 YRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMV 491
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
T PD TY IL+SG+ R+ + L+ ML++G +PD+ TY + GL
Sbjct: 492 TINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGL 544
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 163/324 (50%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N ++KA +++ + M + P+ + YN+L++G +K +++ Y M
Sbjct: 573 YNSMMNGYLKAGKLHKVEMTIYDMNQ-NKVYPNPASYNILMHGHIKKGHLSRSIYLYKDM 631
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR +KP VT+ +LI G ++ ++A+ +M +G P+ +SF+ LI F + +
Sbjct: 632 VRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRM 691
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + M L SS T +++GL + + +C+++ D G+ PK Y L
Sbjct: 692 SDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIAL 751
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G+ A + +E+ G +P+ +A ++++ GL + K E + +++ G+
Sbjct: 752 INAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGM 811
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P TF L+ LC + DA L+ L + GL D +TY++L++G + +
Sbjct: 812 VPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALE 871
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L EM +G P++ TY + + +
Sbjct: 872 LYEEMKSKGLRPNVTTYTTLTEAI 895
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 1/281 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L+ G D+AL ++MV PD+ T+ IL+SGFCR K A+ L + M E
Sbjct: 468 NALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLE 527
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVL 312
KG P++V++ L++G E + + E+I + G + +++G G++
Sbjct: 528 KGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLH 587
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
K + D ++ V P Y L+ +G+ ++ + ++ +KG P+ + LI
Sbjct: 588 KVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLI 647
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL + A ++KM+ EGI PD ++F+ L+ + R DA +L +
Sbjct: 648 LGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMS 707
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
P TY +++G R+N + +++ +M++ G P Y
Sbjct: 708 PSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHY 748
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 150/330 (45%), Gaps = 9/330 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
E ++ + F ++M + F M L G +PS++ Y LI+G+ + D+AL
Sbjct: 329 ECTYNTLIKGFFDESKMMLAIHIFNEM--LRQGLKPSLATYTTLIDGYCRNGTIDEALRV 386
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
M VKP VT++ +++G A ++ M + GC+P+V ++ L+RG
Sbjct: 387 LYEMQVAGVKPSEVTYSAMLNGSVHE-----AFSVYDNMEKYGCSPDVYTYRNLLRGLCK 441
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ ++ + T L+ G+CN G + +A +L +P
Sbjct: 442 GGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHT 501
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ C +G A+ ++ + +KG +P ++ T L++GL + + AS L ++++
Sbjct: 502 YTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEII 561
Query: 393 -KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
KEG+ D + +N ++ G+ + + + P+ +Y+IL+ G+ ++
Sbjct: 562 CKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHL 621
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L +M+ +G P TY + GLS
Sbjct: 622 SRSIYLYKDMVRKGIKPTNVTYRLLILGLS 651
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 9/228 (3%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C+ N + F+ L+ + E++ + M G + S+ C +++ L G
Sbjct: 151 CDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGE----S 206
Query: 316 ELVIDFSRRGVL---PKDFDYFGLV-EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+ V F + G++ P D +V +C EGN A ++ ++ K +LP+VI T+
Sbjct: 207 KHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKM-KSCSLPNVITYNTI 265
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+ + + A ++E M K G+ D T+N +++ LC + R+ A L L
Sbjct: 266 LHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNL 325
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
PD TY+ L+ G+ E++ ++ NEML +G P LATY + +DG
Sbjct: 326 APDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDG 373
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 36/243 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +NAF + +RM+D L F M+ L PS Y+ +ING ++ + M
Sbjct: 678 FDVLINAFSEKSRMSDALQLFNCMKWLYMS-PSSKTYSAMINGLIRKNWLQHSCDVLRDM 736
Query: 217 VRDRVKPDVVTFNILISGFCR----NKKFDL-----ALGL-------------------- 247
V ++P + LI+ CR N F L ALG+
Sbjct: 737 VESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKV 796
Query: 248 ------FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
F + G P + +F TL+ G E K + +++ M G + VT +L
Sbjct: 797 EEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVL 856
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GLC V A EL + +G+ P Y L E + G G ++++++ +G
Sbjct: 857 ITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGL 916
Query: 362 LPS 364
+PS
Sbjct: 917 VPS 919
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
TC I+++ +C EG LK + +I + LP Y ++ +G A+ V++++
Sbjct: 227 TCNIVLNSMCIEGN-LKGAKHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDM 285
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K G V +I+ L ++++ A L+++M + + PD T+N L++ D +
Sbjct: 286 EKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKM 345
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+ A + +GL P TY L+ GY R E ++ EM G P TY++
Sbjct: 346 MLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAM 405
Query: 477 MDG 479
++G
Sbjct: 406 LNG 408
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++ G KC + ++ + + ++R + P + TF L+ G C+ K AL L M G
Sbjct: 786 IVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCG 845
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+VV++N LI G + + + + EM G + T L + + GR L+
Sbjct: 846 LKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGE 905
Query: 316 ELVIDFSRRGVLPKDFD 332
+L+ D RG++P D
Sbjct: 906 KLLNDIEDRGLVPSYTD 922
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++NR+ G L MRK + P+ YN LINGF + A + M
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMI-HPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTFN LI G F AL +F M KG P+ VS+ L+ G +F
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D M G +T ++DGLC G + +A L+ + S+ G+ P Y L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A E+V +++ G P+ I +TLI R+ EA + E M+ EG
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D TFN L+ LC G+ +A+ ++ G+ P+ +++ L++GY + +
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +EM G P TY S + GL
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGL 628
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 6/318 (1%)
Query: 177 FEAMRKLIDGRPS------VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
F+A +L+D S V YN+LI+ + K M + + P+ VT+N
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+GF K +A L EM G +PN V+FN LI G E F E + M Y M G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
S V+ +L+DGLC A + R GV Y G+++ LC G A+
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++E+ K G P ++ + LI G ++ + A ++ ++ + G+ P+ + ++ L+ +
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +G +A R+ +G D T+++LV+ + + E E + M +G +P+
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 471 ATYNSYMDGLSNARKSVR 488
+++ ++G N+ + ++
Sbjct: 584 VSFDCLINGYGNSGEGLK 601
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 11/344 (3%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID---------GRPSVSIYNVL 196
GI+ +M+ + H V N M DG + K D G P+++ YN+L
Sbjct: 743 GIYFREQMDNLGH--TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
++G+ K ++ + Y ++ + + PD +T + L+ G C + ++ L + + +G
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
+ +FN LI + + ++ M LG TC+ +V L R ++
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
++ + S++G+ P+ Y GL+ LC G+ A V +E+ P +A + ++ L
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ K EA+ L+ MLK ++P +F L+ C G ++A LR++ S GL D +
Sbjct: 981 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y++L++G + L EM +GF+ + TY + + GL
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 142/333 (42%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLIN-----------------------------------GFVKCREFDKALGF 212
P V+ +N+LIN + K F A+
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D M V DV T+N+LI CR+ + L R+MR++ +PN V++NTLI GF
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E K + EM+ G + VT L+DG +EG +A ++ +G+ P +
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC +A + + G I T +I+GL + EA L+ +M
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+GI PD VT++ L+ C VGR A + GL P+G+ Y L+ R K
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + M+ EG D T+N + L A K
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS Y VL++G K EFD A GFY RM R+ V +T+ +I G C+N D A+ L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G +P++V+++ LI GF +F + + +G + + L+ C
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + G F + LV LC G A E + + G LP+ ++
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G +G++A + ++M K G P T+ LL+ LC G +A++
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
D + Y+ L++ + + +L EM+ +PD TY S + GL K+V
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 165/431 (38%), Gaps = 88/431 (20%)
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS 143
H Q HI A D RH + S SS+ F L + ++NP
Sbjct: 110 HIVQLVCITTHILVRARMYDPARHILKELSLM--SGKSSFVFGALMTTYRLCNSNP---- 163
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
++ + +++ + D L F M L PSV N ++ VK
Sbjct: 164 -----------SVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKS 211
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
E F M++ ++ PDV TFNILI+ C F+ + L ++M + G P +V++
Sbjct: 212 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 271
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NT++ + + +F + + M G + T +L+ LC R+ K L+ D +
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
R + P + Y TLI G K +
Sbjct: 332 RMIHPNEVTY-----------------------------------NTLINGFSNEGKVLI 356
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
AS L+ +ML G+ P+ VTFN L++ G +A ++ + KGL P ++Y +L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 444 G-------------YTRENRR----------------------KEGENLVNEMLDEGFIP 468
G Y R R E L+NEM +G P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 469 DLATYNSYMDG 479
D+ TY++ ++G
Sbjct: 477 DIVTYSALING 487
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K +++ ++ M K DG P + Y+ LINGF K F A R+ R
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSK--DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+ + ++ LI CR A+ ++ M +G + +FN L+ K E
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M G ++V+ + L++G N G LKA + + ++ G P F Y L++
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+ A + + L + TL+ + + +A L +M++ ILPD
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDPDGMTYHILVSGYTRENRRKEGENLV 458
S T+ L+ LC G+TV A A +G + P+ + Y V G + + K G
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+M + G PD+ T N+ +DG S K
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ IY+ LI + +A+ Y+ M+ + D TFN+L++ C+ K A
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M G PN VSF+ LI G+ + + ++ EM ++G + T L+ GLC
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + + Y L+ +C GN A+ + E+ ++ LP
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG-ILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI GL R K V A ++ G +LP+ V + C ++ + G+ R
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +T + ++ GY+R + ++ +L+ EM ++ P+L TYN + G S RK
Sbjct: 751 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK-RKD 809
Query: 487 VRQT 490
V +
Sbjct: 810 VSTS 813
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NVL+ K + +A F M D + P+ V+F+ LI+G+ + + A +F EM
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G +P ++ +L++G E + + +V L+ +C G +
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTL 371
KA L + +R +LP + Y L+ LC +G IA+ E +GN LP+ + T
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
++G+ + + E+M G PD VT N +++ +G+ + L +
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+ GY++ L ++ G +PD T +S + G+
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +Y ++G K ++ + F ++M PD+VT N +I G+ R K + L
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + PN+ ++N L+ G+ + + +I G +TC LV G+C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +++ F RGV + + L+ K C G A ++V + G
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C ++ L R + E+ ++ +M K+GI P+S + L+ LC VG A ++
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 961
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ P + +V + + E L+ ML +P +A++ + M
Sbjct: 962 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
CN N ++ LIR + E + + + M G S TC ++ + G +
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ + +R + P + L+ LC EG+
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFE---------------------------- 250
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
++S LM+KM K G P VT+N +L C GR A L +KG+D D
Sbjct: 251 -------KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY++L+ R NR +G L+ +M P+ TYN+ ++G SN K
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V A K + ++ LL F KL+ P+++ + L++ K +AL M
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLV---PTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K D+V++N+LI+G C LA L+ EM+ G N ++ LIRG
Sbjct: 1033 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1092
Query: 279 GVNM 282
G ++
Sbjct: 1093 GADI 1096
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 12/221 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T +V L ++RF E VL+ S GI PE R + +N +
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLH-------EMSKQGI--SPE-SRKYIGLINGLCRV 947
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + E M P+V+ + ++ KC + D+A M++ ++ P + +
Sbjct: 948 GDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 1006
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F L+ C+N AL L M G ++VS+N LI G + + EM
Sbjct: 1007 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1066
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVI-DFSRRGVL 327
G ++ T + L+ GL ++++ D RG +
Sbjct: 1067 GDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 155/315 (49%), Gaps = 12/315 (3%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
LA+E + K P V Y+ LI G + + +A G D M+ +P V T+ ++
Sbjct: 147 LAWELIHK-SGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQA 205
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR+ + A L EM GC PNVV++N LIR + KFDE + E + S
Sbjct: 206 YCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPS 265
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG---NAGIALE 351
+VT I ++GLC +G+ +A EL+ G+ P + + L+ LC +A LE
Sbjct: 266 TVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLE 325
Query: 352 VVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
EL W G V+A T++ L + K L+ M+K+GI P++ TFN L+ L
Sbjct: 326 RSTELKWYAG----VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSL 381
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G++ A + L ++G + +TY+IL+ + + E L++ M ++ PD
Sbjct: 382 CVGGKSSLA---KSLIHSQGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDE 438
Query: 471 ATYNSYMDGLSNARK 485
TY +DGL RK
Sbjct: 439 VTYTIIIDGLCRERK 453
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 13/275 (4%)
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR-------EKGCNPNVVSFNTLIRGF 270
R R++ D +N+ + D + +F E++ + G PNV+ +NTL+
Sbjct: 48 RRRLERD---YNVAMKALALAGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNAL 104
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ E + EM+ G ++ + IL+ A EL+ + GV P
Sbjct: 105 AEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELI---HKSGVEPDV 161
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC G A V+D + +K P V T +++ R + VEA LM +
Sbjct: 162 GTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAE 221
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G LP+ VT+N L+ LCD + + +++ + +STK P +TY+I ++G ++ +
Sbjct: 222 MERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGK 281
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE L++ ML EG P T++ ++ L ++ +
Sbjct: 282 AKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSR 316
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN+L++ F + +A M + PD VT+ I+I G CR +KFD A F
Sbjct: 402 NVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACF 461
Query: 249 REMREKGCNPNVVS 262
+ G + +V++
Sbjct: 462 LKSLTSGLSMDVLT 475
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
+ P++ YN+LIN + + R D L + R++R + PDV ++N LI GF + + D A
Sbjct: 113 EAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKA 172
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
LF +M E+G PNVV++++LI G ++ D+ + +M+ G +++T L+ G
Sbjct: 173 HDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHG 232
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
G ++ + + S ++P + + LC G A ++ D + KG P
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
VI+ L+ G L M+ EG++PD FN L+ +G +D L
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG-MMDKSLLMF 351
Query: 425 LASTK-GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TK G++PD +T+ ++S + R R + N M+D G PD A Y+ + G N
Sbjct: 352 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Query: 484 RKSVR 488
R V+
Sbjct: 412 RDLVK 416
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A K R+ + F++M L +P V Y L++G+ ++ MV +
Sbjct: 265 MTALCKHGRIKEARDIFDSM-VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEG 323
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PD FN LI+ + R D +L +F +M ++G NP++++F+T+I F + D+ +
Sbjct: 324 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 383
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF-GLVEK 339
MI+ G + L+ G CN ++KA EL+ D +G+ P +F ++
Sbjct: 384 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 443
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC EG +VVD + G P++I +L++G + EA GL++ M G+ PD
Sbjct: 444 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 503
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L++ C GR DA L K + ++Y+I++ G + R + + +
Sbjct: 504 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 563
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM++ G + TY + + GL
Sbjct: 564 EMIESGMAVSIHTYATVLGGL 584
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 37/363 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ +NA+ + M+ LL FE M K P + ++ +I+ F + D A+ ++
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQ-GVNPDIITFSTVISAFCRLGRLDDAMEKFNH 388
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC------------------- 256
M+ V PD ++ LI G C + A L +M KG
Sbjct: 389 MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEG 448
Query: 257 -----------------NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
PN+++FN+L+ G+ E V + M +G E T
Sbjct: 449 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 508
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
LVDG C GR+ A L D + V Y ++ L +A E+ E+ +
Sbjct: 509 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 568
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G S+ T++ GL R EA+ L+EK+ + D +TFN ++ + VGR +A
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L ST GL P +TY ++++ +E ++ +NL + M PD N +
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 688
Query: 480 LSN 482
L N
Sbjct: 689 LLN 691
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 13/316 (4%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID------GRPSVSIYNVLINGFVKCR 204
P + F +N K R+ +G + ++D RP++ +N L++G+
Sbjct: 431 PPCIKFFTSIINNLCKEGRVAEG-------KDVVDLIIHTGQRPNLITFNSLVDGYCLVG 483
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+A+G D M V+PD+ T+N L+ G+C++ + D AL LFR+M K VS+N
Sbjct: 484 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 543
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
++ G F R+ M +EMIE G S T ++ GLC +A L+
Sbjct: 544 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM 603
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
V + ++ + G A E+ + G +P+++ +I L + +A
Sbjct: 604 NVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDA 663
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L M K PDS N ++ L + G A KG+ P+ T +L+
Sbjct: 664 DNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYL 723
Query: 445 YTRENRRKEGENLVNE 460
++ + +E L+ E
Sbjct: 724 FSVNGKYREYIKLLPE 739
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
RLL + GL PD +Y+ L+ G+++E + +L +M ++G +P++ TY+S ++GL
Sbjct: 143 RLLRT--GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCK 200
Query: 483 ARKSVRQTR 491
++ + R
Sbjct: 201 TKEMDKAER 209
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 21/332 (6%)
Query: 169 RMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
+M + A + +RK IDG+ +V +Y+ +I+ K + +A Y +M+ +V PDV
Sbjct: 165 KMGETRAALQVLRK-IDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTF+ LI GFC +F A GLF EM NP+V +FN L+ E E N+
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283
Query: 286 MIELGCEFSSV-----------------TCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
M++ + + + I++ LC V +A L + +G+ P
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L++ LC A E++D++ +G VI T+ + L + + +A L+
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALV 403
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+K+ +GI P+ T+N L++ LC GR +A + KG TY+I+++G E
Sbjct: 404 KKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLE 463
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
E L+ +M D G PD+ TY + + L
Sbjct: 464 GLFDEAMTLLEKMEDNGCTPDVVTYETIIRAL 495
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 155 RIFHFAVNAFVKANRMN--DGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE--FDKAL 210
R H++ + F +N ++ D + +F M ++ + PS+ +N ++ VK + A+
Sbjct: 11 RTLHYSHSKF-NSNHVDVHDAISSFYRMLRM-NPSPSIIEFNKILGSLVKSNNNNYPIAI 68
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
Y R+ + + P +VTFN +I+ +C + D A + ++ + G +P+ ++ TLI+G
Sbjct: 69 SLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGL 128
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
K E ++ +I G + V+ IL++GLC G A +++ + V
Sbjct: 129 CLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNV 188
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +++ LC E A E+ ++ K P V+ + LI G + + EA GL +
Sbjct: 189 VMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHE 248
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVD-----------------ADRLRLLASTKGLDP 433
M+ I PD TFN L++ LC G T + A + + + + P
Sbjct: 249 MVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTP 308
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D +Y I++ + E +L NEM +G PD TY+S +DGL + +
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 142/305 (46%), Gaps = 17/305 (5%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +LING K E AL ++ V +VV ++ +I C+ K A L+ +M
Sbjct: 156 YGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMI 215
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG--- 309
K +P+VV+F+ LI GF +F E + +EM+ T ILVD LC EG
Sbjct: 216 VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTK 275
Query: 310 --------------RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
+V KA + +R V P Y ++++LC AL + +E
Sbjct: 276 ETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNE 335
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ KG P + ++LI+GL + + A L+++M G D +T+ L LC +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQ 395
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L +G+ P+ TY+IL+ G +E R + + + ++L +G+ + TYN
Sbjct: 396 VDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455
Query: 476 YMDGL 480
++GL
Sbjct: 456 MINGL 460
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 22/343 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ +N + M+ AF + K++ P LI G + +AL F+D
Sbjct: 86 FNTVINCYCHLGEMD---FAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHD 142
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ + + V++ ILI+G C+ + AL + R++ K N NVV ++T+I E+
Sbjct: 143 HVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEK 202
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + +MI VT L+ G C G+ +A L + + P +
Sbjct: 203 LVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFN 262
Query: 335 GLVEKLCGEGNA-------GIALEVVDELWKKGNL----------PSVIACTTLIEGLRR 377
LV+ LC EG+ + ++ V+++ K ++ P V + T +I+ L +
Sbjct: 263 ILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCK 322
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
++ EA L +M +GI PD VT++ L++ LC R A L +G D +T
Sbjct: 323 IKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVIT 382
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y + + ++ + LV ++ D+G P++ TYN +DGL
Sbjct: 383 YTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y ++I K + D+AL ++ M + PD VT++ LI G C++++ A L
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M +G +V+++ + + + D+ V + ++ + G + + T IL+DGLC
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGR A + D +G + Y ++ LC EG A+ +++++ G P V+
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
T+I L + + +A L+ +M+ G+L + V
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A ++K+ D +P+++ YN+LI+G K F+ A + ++ K V T+NI+I+
Sbjct: 399 AVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMIN 458
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
G C FD A+ L +M + GC P+VV++ T+IR F + + + EMI G
Sbjct: 459 GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 5/300 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ S+YN ++ K + +A+ M KPDVVTFN LI+G C+ + D A +
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM G N+V++NTLI G + E V + M + T ++ G C
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCK 168
Query: 308 EGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL-WKKGNLPSV 365
G + +A + + +R G P F Y L+ LC N A E++ E+ +K SV
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+A TL++G + + A L+ ML+ G PD VT++ +++ LC G L
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++G PD +TY +LV+G + + E LV ML++G P+ TY+ DGL K
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDK 348
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 173/374 (46%), Gaps = 19/374 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ T+ +VR+ + +L + P G+ P M ++F V+A K+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQP------GMAPTPSM---YNFFVHALCKS 67
Query: 168 NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ + A E ++ + DG +P V +N LI G K D+A D M R ++
Sbjct: 68 GKVPE---AMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANL 124
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N LI+G + A+ + + M P+ ++N +I GF + D E
Sbjct: 125 VTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEE 181
Query: 286 MIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLCGE 343
M + GC + T IL++GLC + KA EL+ + R+ + LV+ C
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKA 241
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
+ A E++ + + G P V+ +T+I+GL R + L+EKM+ G PD VT+
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L+ LC G+ V+A RL G P+ +TY ++ G + ++ +L+ + D
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361
Query: 464 EGFIPDLATYNSYM 477
+G + D+ + + +
Sbjct: 362 KGRVTDVVAFETLL 375
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 14/274 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ ++ L+S+ R E V+ ++ P + ++ ++ F
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTP-------------DTQTYNAIIHGF 166
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV-RDRVKP 223
K+ ++ E M++ P Y++LING K KA M+ R
Sbjct: 167 CKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCA 226
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
VV FN L+ G+C+ + D A L M E GC P+VV+++T+I G D+G +
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALL 286
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M+ GC+ VT +LV GLC G++++AC LV G P Y + + LC
Sbjct: 287 EKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKI 346
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+A +++ + KG + V+A TL+ +++
Sbjct: 347 DKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKK 380
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 12/305 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
Y VL+ E A+ M + + P +N + C++ K A+ + + M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++ C P+VV+FNTLI G + DE + EM G + VT L++GL + GR
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR- 139
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTT 370
+ E V+ P Y ++ C G A ++E+ ++ G P +
Sbjct: 140 --SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 371 LIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST- 428
LI GL + +A L+++M+ ++ V FN L++ C + D DR R L S+
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYC---KAQDLDRARELLSSM 254
Query: 429 --KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +TY ++ G R +G L+ +M+ G PD+ TY + GL A K
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKM 314
Query: 487 VRQTR 491
V R
Sbjct: 315 VEACR 319
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 163/335 (48%), Gaps = 14/335 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ +N+ + R D + FE+ + DG P V +NV+I G + F KAL +
Sbjct: 182 YNYLLNSLIAHGRAQDAVALFESW--IQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVE 239
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGE 273
RM PD +T NIL+ G CR K+ + + R ++ G C PN V++ ++I G+
Sbjct: 240 RMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKA 299
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K ++ +++ +M+E G ++VT +L++G + A + R P +
Sbjct: 300 GKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTF 359
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNL----PSVIACTTLIEGLRRLRKGVEASGLME 389
L++ C G L+ +WK+ L P+V + +I L + + EA ++
Sbjct: 360 SSLIDGYCRCGQ----LDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILR 415
Query: 390 KM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
++ ++ I P + +N +++ LC G+ +A+ + KG PD TY IL+ G+ +
Sbjct: 416 ELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMK 475
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R E L ++M++ G PD T NS++ + A
Sbjct: 476 GRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKA 510
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 147/288 (51%), Gaps = 7/288 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DG--RPSVSIYNVLINGFVKCR 204
F C + V+ +A ++N G E +R+L DG P+ Y +I+G+ K
Sbjct: 244 FGCSPDTITHNILVDGLCRAKQVNKG---HEVLRRLQRDGVCMPNAVTYTSVISGYCKAG 300
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ + A+ Y+ M+ +P+ VT+N+LI+G+ + + A+ ++R++ + C P+VV+F+
Sbjct: 301 KMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFS 360
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS-R 323
+LI G+ + D+ + EM + + T I++ LC + R +A +++ + + R
Sbjct: 361 SLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMR 420
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
+ P+ F Y +++ LC G A +V ++ +KG P T LI G + E
Sbjct: 421 TDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPE 480
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
A L KM++ G PD++T N + + G + D++ L+AS GL
Sbjct: 481 AITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIMLIASGHGL 528
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 161/397 (40%), Gaps = 25/397 (6%)
Query: 113 LFIVRSLASSYRFSELHSVLNFISANPC-----------PCSNDGI----------FSCP 151
L+I ++LAS+ F H + F P PC+ + S P
Sbjct: 47 LWIAKALASAALFRP-HCLPAFRGLTPSHLAAVAAVRLAPCAGSALRIFSALHSPPLSVP 105
Query: 152 EMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
E+ + + ++ R D L F+ M P ++ + D A
Sbjct: 106 PSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAAST 165
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC-NPNVVSFNTLIRGF 270
+ R + +N L++ + + A+ LF + G +P+V SFN +I+G
Sbjct: 166 LLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGV 225
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV-LPK 329
F + + + M E GC ++T ILVDGLC +V K E++ R GV +P
Sbjct: 226 CRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPN 285
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ C G A+ V +++ + G P+ + LI G + A +
Sbjct: 286 AVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 345
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+++ PD VTF+ L++ C G+ DA R+ + P+ T+ I++ ++N
Sbjct: 346 QLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQN 405
Query: 450 RRKEGENLVNEM-LDEGFIPDLATYNSYMDGLSNARK 485
R E +++ E+ + P YN +D L K
Sbjct: 406 RSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGK 442
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 36/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ RM + F+ M + + + + +NVLI+G+ K D+A Y M
Sbjct: 292 YNILVDVLCHEGRMPEARRLFDEMAQ-VGIQANTITFNVLIDGYAKTGRMDQACAAYREM 350
Query: 217 VRDRVKPDVVTFNILISG--------------------------------FCRNKKFDLA 244
+ PD TFNI+ +G C + + D A
Sbjct: 351 KARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDA 410
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L R E+G +V FN LI + E +E + M +LG SS T L+ G
Sbjct: 411 WELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMG 470
Query: 305 LCNEGRVLKACELVIDFSRRG-VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LCN+GR+ +A L+ +G L F ++ EGNA AL+ D++ K G P
Sbjct: 471 LCNQGRLDEAQLLLEHMVSKGYCLSTSFTI--CLDASFREGNAVCALKCWDDMGKLGLQP 528
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
IA + I GL RL EA +M GI+P++ T+N ++ LC G +A +L+
Sbjct: 529 DFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQ 588
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
GL PD T +IL+ G RE + + +NL+ +M G PD TYN+ ++ A
Sbjct: 589 QNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRA 648
Query: 484 R 484
+
Sbjct: 649 K 649
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 6/314 (1%)
Query: 169 RMNDGLLAFEAMRKLID-GRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R++D A+E +R I+ G P SV+ +N LI + K ++A Y M + + P
Sbjct: 406 RLDD---AWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSS 462
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFN LI G C + D A L M KG + SF + F E + +M
Sbjct: 463 TFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDASFREGNAVCALKCWDDM 521
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+LG + + ++GLC V +A + + + RG++P +F Y ++ LC GN
Sbjct: 522 GKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNM 581
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
AL++ + + G +P + LI+GL R K L+ M G+ PD+VT+N +
Sbjct: 582 TEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTI 641
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C A G +PD TY+I + + + +++E++ G
Sbjct: 642 INAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGC 701
Query: 467 IPDLATYNSYMDGL 480
PD TYN+ MDG+
Sbjct: 702 PPDSVTYNTLMDGI 715
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 156/427 (36%), Gaps = 104/427 (24%)
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
A++AF+ A + L +R+ G+ PS+S L+ + E A ++ M
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRR--SGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMA 211
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALG------------------------------- 246
+P + TFN +I GFC +A G
Sbjct: 212 ARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSR 271
Query: 247 ----LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
LF EM GC P VV++N L+ E + E + EM ++G + +++T +L+
Sbjct: 272 DAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLI 331
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPK----------------------DFDYFG----- 335
DG GR+ +AC + RG++P D D FG
Sbjct: 332 DGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLA 391
Query: 336 -----LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
LV +LC + A E++ ++G SV LI + EA L
Sbjct: 392 DGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRI 451
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK--------------------- 429
M K G+ P S TFN L+ LC+ GR +A L +K
Sbjct: 452 MNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNA 511
Query: 430 -------------GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
GL PD + + ++G R + E EM G +P+ TYNS
Sbjct: 512 VCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSI 571
Query: 477 MDGLSNA 483
+ L A
Sbjct: 572 ISALCRA 578
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 6/250 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F +N + + +N+ AF M R ++ P+ YN +I+ + +AL
Sbjct: 533 FSAYINGLCRLDYVNEAYQAFAEMTARGIV---PNNFTYNSIISALCRAGNMTEALKLQQ 589
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++ + PD+ T NILI G CR K ++ L +M G P+ V++NT+I + +
Sbjct: 590 NMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAK 649
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +N +M+ GCE T I + LC+ + +A +++ + G P Y
Sbjct: 650 DMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYN 709
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ +C + A+ + L K P+ I + + G A EK+ ++
Sbjct: 710 TLMDGICSD-VLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLRED 768
Query: 395 GILPDSVTFN 404
+ D T N
Sbjct: 769 SFVFDDATRN 778
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 147/370 (39%), Gaps = 58/370 (15%)
Query: 110 TTFLFIVRSLASSYRFSELHSVL-NFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKAN 168
+TF +++ L + R E +L + +S C + F ++A +
Sbjct: 462 STFNYLIMGLCNQGRLDEAQLLLEHMVSKGYC------------LSTSFTICLDASFREG 509
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
L ++ M KL +P ++ ING + ++A + M + P+ T+
Sbjct: 510 NAVCALKCWDDMGKL-GLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTY 568
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N +IS CR AL L + MR+ G P++ + N LI
Sbjct: 569 NSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILI--------------------- 607
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
DGLC EG++ L++D G+ P Y ++ C +
Sbjct: 608 --------------DGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNS 653
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A+ ++++ G P + + L +A ++++++ G PDSVT+N L++
Sbjct: 654 AMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMD 713
Query: 409 DLC-DVGRTVDADRLRLLAS---TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
+C DV DR +L P+ +T ++ +S + ++ K ++ ++
Sbjct: 714 GICSDV-----LDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLRED 768
Query: 465 GFIPDLATYN 474
F+ D AT N
Sbjct: 769 SFVFDDATRN 778
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 162/358 (45%), Gaps = 36/358 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F K +M + F M++L P Y LI+G+ K ++A ++M
Sbjct: 502 FNTMINGFCKMEKMIEAEETFNRMKEL-GFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKM 560
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + P + +N LI G ++KK + L EM KG +PNVV++ TLI G+ E +
Sbjct: 561 EKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRL 620
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV------------------ 318
D+ ++MIE G + + C +V L GR+ +A L+
Sbjct: 621 DKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRL 680
Query: 319 ----------------IDFSRRGV-LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+D S + LP Y + LC G A ++ L +G
Sbjct: 681 HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGF 740
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P TLI G +A L ++MLK G+ P+ +T+N L+ LC G A +
Sbjct: 741 SPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQK 800
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L KGL P+ ++Y+IL+ GY + +E +L N+ML EG P L TY++ + G
Sbjct: 801 LFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYG 858
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 44/376 (11%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
+F+C M VNA+ K +N + + M L +V YN LI+G V +
Sbjct: 218 VFTCSIM-------VNAYCKDGWVNVAVDFVKEMDYL-GFELNVVTYNSLIDGCVSIGDM 269
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNT 265
++A M + + VT +LI G+CR K + A + REM R +G + ++
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGV 329
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G+ K D+ V + EM+ +G + C L++G C G+V +A L++
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P+ + Y L++ C EG A+ V +E+ + G +V+ +L++GL R+ +A
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 386 GLMEKMLKEGILPDSVT-----------------------------------FNCLLEDL 410
+ MLK G+ PD V+ FN ++
Sbjct: 450 HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGF 509
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C + + ++A+ G +PDG+TY L+ GY + +E + +M E +P +
Sbjct: 510 CKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSI 569
Query: 471 ATYNSYMDGLSNARKS 486
YNS + GL ++K+
Sbjct: 570 ELYNSLIGGLFKSKKT 585
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 35/327 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +YN LI G K ++ + + M + P+VVT+ LI+G+C + D A
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC---------------- 291
+ +M EKG PNV+ + ++ + + DE + +M+ L
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDG 686
Query: 292 ----------------EFS---SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
FS SV I + GLC G+V A ++ RG P +F
Sbjct: 687 NLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L+ GN A + DE+ K+G P++I LI GL + A L +K+
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ P+ +++N L++ C G T +A LR +G+ P +TY L+ G+ ++
Sbjct: 807 LKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMG 866
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDG 479
+ NL++EM + ++A + ++G
Sbjct: 867 KATNLLDEMRELFADQNIAKFVKLVEG 893
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLI+G+ + + D A+ D M+ ++ ++ N LI+G+C+N + A L M
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ P S++TL+ GF E + +++ EM+ +G + + VT L+ GLC G
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A + +RGV P + Y L++ L G AL + +++ +G S A T+I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G ++ K +EA +M + G PD VT+ L++ C +G +A +++ + +
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P Y+ L+ G + + +E +L++EM +G P++ TY + + G
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAG 613
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 173/432 (40%), Gaps = 114/432 (26%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCRE--FDKALGFYDRM 216
+N + K ++++ A + +++D P Y+ L++GF CRE KA+ Y+ M
Sbjct: 366 INGYCKNGQVSE---AERLLMRMVDWDLEPESYSYSTLMDGF--CREGLVTKAISVYNEM 420
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS-------------- 262
+R ++ +VVT N L+ G CR F+ AL ++ M ++G P+ VS
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480
Query: 263 ---------------------FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
FNT+I GF K E M ELG E VT L
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540
Query: 302 VDGLCNEGRVLKA-----------------------------------CELVIDFSRRGV 326
+DG C G V +A +L+ + +G+
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P Y L+ C EG A ++ +KG P+VI C+ ++ L RL + EA+
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANM 660
Query: 387 LMEKML-----------------------------------KEGILPDSVTFNCLLEDLC 411
L++KM+ K LP+SV +N + LC
Sbjct: 661 LLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLC 720
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G+ DA ++ +G PD TY L+ GY+ + +L +EML G P++
Sbjct: 721 KSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNII 780
Query: 472 TYNSYMDGLSNA 483
TYN+ ++GL +
Sbjct: 781 TYNALINGLCKS 792
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 151/317 (47%), Gaps = 1/317 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + ++ + + +M+D + + M + R ++ I N LING+ K + +A
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLN-VGLRMNLFICNALINGYCKNGQVSEAERLL 382
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
RMV ++P+ +++ L+ GFCR A+ ++ EM G NVV+ N+L++G
Sbjct: 383 MRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRV 442
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
F++ +++ + M++ G V+ L+D L G +A L D RG + +
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAF 502
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ C A E + + + G P + TLI+G +L EA + EKM K
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEK 562
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
E ILP +N L+ L +T + L KGL P+ +TY L++G+ E R +
Sbjct: 563 EAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDK 622
Query: 454 GENLVNEMLDEGFIPDL 470
+M+++GF P++
Sbjct: 623 AFTAYFDMIEKGFAPNV 639
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 200/441 (45%), Gaps = 17/441 (3%)
Query: 51 THLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHT 110
+ LL + H L N Q + +L + KL +P + H F AS +FR +
Sbjct: 40 SRLLVLGRYHALKDLNFQFS-DYILDSVLLKLKFNPIAS---LHFFKLASKQSNFRPNVN 95
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFH----------FA 160
+ +V L+ + + E S LN + P + + E+ R+F
Sbjct: 96 SHCKLVHILSRARMYDETRSYLNEL-VTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMI 154
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + + + + L F+ M KL PS+ N L++ V+ E A+ YD + R
Sbjct: 155 LKIYCEKGMIKNALHVFDNMGKL-GCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLG 213
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PDV T +I+++ +C++ ++A+ +EM G NVV++N+LI G +
Sbjct: 214 IVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAE 273
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDFDYFGLVEK 339
+ M E G + VT +L+ G C + ++ +A +++ + R G++ ++ Y L++
Sbjct: 274 MVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDG 333
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C A+ + DE+ G ++ C LI G + + EA L+ +M+ + P+
Sbjct: 334 YCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPE 393
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
S +++ L++ C G A + G+ + +T++ L+ G R ++ ++ +
Sbjct: 394 SYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWH 453
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
ML G PD +Y + +D L
Sbjct: 454 LMLKRGVTPDEVSYCTLLDLL 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + A +ND + M K P++ YN LING K D+A +D++
Sbjct: 751 IHGYSAAGNVNDAFSLRDEMLKR-GLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKG 809
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+V+++NILI G+C+N AL L +M ++G +P++++++ LI GF + +
Sbjct: 810 LAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKAT 869
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
N+ EM EL + + LV+G G V K +L
Sbjct: 870 NLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 168/353 (47%), Gaps = 16/353 (4%)
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP--SVSIY 193
S N C S G F N F ++D AF R+++ +P SV+ +
Sbjct: 29 STNTCSISVKGNFGVS----------NEFQNVKCLDD---AFSLFRQMVRTKPLPSVASF 75
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+ L+ V + + + + + + R+ +I+++ C + DL + +
Sbjct: 76 SKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFK 135
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRVL 312
KG N V+F TLIRG F E K + V++ +++ E CE + V +++GLC +G
Sbjct: 136 KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA +L+ + P Y +++ C +G A +++E+ +K P + +TLI
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L +L + L +M+ I P+ TFN +++ LC G+ DA+ + KG+D
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD +TY++++ GY + + + M+++ PD+ +YN ++G + +K
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKK 368
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 164/377 (43%), Gaps = 48/377 (12%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFD 207
C E ++ +N K AF+ +R + G +P+ Y ++I+ F K D
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQK---AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLD 230
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A + M + + PD+ T++ LI C+ +++ LF EM PNV +FN++I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G E K ++ + MIE G + +T +++DG G+V +A E+ + +
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ + A++V E+ +KG PS++ C L+ GL L + A
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410
Query: 388 MEKMLKEGILPDSVT-----------------------------------FNCLLEDLCD 412
++ML G +PD T + +++ LC
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 413 VGRTVDA----DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
G+ A ++L L+ GL PD +TY ++SGY +E E ++++ +M D G +
Sbjct: 471 NGKLDKAHATFEKLPLI----GLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLA 526
Query: 469 DLATYNSYMDGLSNARK 485
D TYN + G + K
Sbjct: 527 DNRTYNVIVRGFLRSNK 543
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 10/335 (2%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P E F + N++ D + F+ + + P+ +Y ++NG K KA
Sbjct: 139 PYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAF 198
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M + KP+ T+ I+I FC++ D A L EM++K P++ +++TLI
Sbjct: 199 DLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDAL 258
Query: 271 FGERKFDEGVNMAYEMIELG-----CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+++ + EMI L C F+SV +DGLC EG+V A E++ +G
Sbjct: 259 CKLSQWENVRTLFLEMIHLNIYPNVCTFNSV-----IDGLCKEGKVEDAEEIMRYMIEKG 313
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P Y +++ G A E+ D + K P +I+ LI G R +K EA
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAM 373
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ ++ ++G+ P VT N LL L ++GRT A + G PD T+ L+ GY
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ +E + +++ ++ Y + +DGL
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGL 468
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N +I+G K + + A M+ V PDV+T+N++I G+ + D A +
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K P+++S+N LI G+ ++K DE + + E+ + G + S VTC +L+ GL
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A + G +P + + L+ G A+ +L ++ ++
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I+GL + K +A EK+ G+ PD +T+ ++ C G +A +
Sbjct: 461 YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
G D TY+++V G+ R N+ E + + E+ + F + AT MD
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 3/326 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ + A+ K +++ +LAF MR+ G P++ Y +++ + + D A+ +D
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQ--QGLHPNIVTYGTVMDALCRVGKVDDAMSQFD 405
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
R++ + + P+ V F LI G C K+D A L EM +G PN + FNTL+ E
Sbjct: 406 RLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEG 465
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
N+ M+ + + +T L+DG C +G+V +A +L+ GV P + Y
Sbjct: 466 MVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYN 525
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
++ C G A + ++ KG P ++ +T++ GL + R+ A L M+K
Sbjct: 526 TIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKC 585
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI T+N +L+ LC T DA R+ T++I++ + R E
Sbjct: 586 GIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEA 645
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
++L +L G +P++ TY M L
Sbjct: 646 KDLFASLLARGLVPNVVTYWLMMKSL 671
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P SIY L++G+ + D MVR+ +PD FNILI + ++ D A+
Sbjct: 308 KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAML 367
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F +MR++G +PN+V++ T++ K D+ ++ +I G + V L+ GLC
Sbjct: 368 AFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLC 427
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ KA EL ++ RG+ P + L+ LC EG A + D + + VI
Sbjct: 428 ACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVI 487
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TTLI+G K EA+ L+E M+ +G+ P+ VT+N ++ C GR DA L
Sbjct: 488 TYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQM 547
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++KG++P + Y ++ G + R + L M+ G + TYN + GL
Sbjct: 548 ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 167/379 (44%), Gaps = 38/379 (10%)
Query: 143 SNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFV 201
++D CP + +N ++ +++ F+ M L G P+ YN L++G+
Sbjct: 195 ADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM--LDQGMSPNCITYNCLLHGYC 252
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+ +A+G + +M RD V+PDVVT+N L+ C+N + A +F M +KG P+
Sbjct: 253 SSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSS 312
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
+ TL+ G+ E + + M+ G + IL+ G V +A
Sbjct: 313 IYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
++G+ P Y +++ LC G A+ D L +G P+ + TLI GL K
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKW 432
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL------------------- 422
+A L +M+ GI P+++ FN LL LC G A +
Sbjct: 433 DKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTL 492
Query: 423 --------RLLASTK--------GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ +TK G+ P+ +TY+ +++GY + R ++ +L +M +G
Sbjct: 493 IDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552
Query: 467 IPDLATYNSYMDGLSNARK 485
P + Y++ + GL R+
Sbjct: 553 NPGIVIYSTILHGLFQTRR 571
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 12/301 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK----PDVVTFNILISGFCRNKKFDL 243
P+ YN+L+ G +AL M+ D + PDVV++ +I+G R + D
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A LF EM ++G +PN +++N L+ G+ K E + + +M G E VT L+
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LC GR ++A ++ ++G P Y L+ EG +++D + + G P
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQP 344
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA---- 419
LI + EA KM ++G+ P+ VT+ +++ LC VG+ DA
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQF 404
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
DRL ++GL P+G+ + L+ G ++ + E L EM+ G P+ +N+ ++
Sbjct: 405 DRL----ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNH 460
Query: 480 L 480
L
Sbjct: 461 L 461
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 5/304 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + Y+++I + D A R++R +TF+ L+ G C +K+ A+
Sbjct: 93 RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152
Query: 247 L-FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI----ELGCEFSSVTCEIL 301
+ R M GC PN S+N L++G E + + +++ + M+ GC V+ +
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++GL EG++ KA L + +G+ P Y L+ C G A+ + ++ + G
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P V+ TL+ L + + +EA + + M+K+G PDS + LL G V +
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L + G PD ++IL+ Y + E ++M +G P++ TY + MD L
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392
Query: 482 NARK 485
K
Sbjct: 393 RVGK 396
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ + ++++ E M ++DG +P+ YN +ING+ K + A + +M
Sbjct: 493 IDGYCLDGKVDEATKLLEGM--VLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASK 550
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V P +V ++ ++ G + ++ A L+ M + G + ++N +++G D+
Sbjct: 551 GVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA 610
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M + + + + T I++D L GR +A +L RG++P Y+ +++
Sbjct: 611 LRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 670
Query: 340 LCGEGNAGIALEVVDELWKKG 360
L +G ++ L K G
Sbjct: 671 LIEQGLLEELDDLFLSLEKNG 691
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
E ++ +N + K R+ D F M K ++ P + IY+ +++G + R A
Sbjct: 521 EVTYNTIINGYCKNGRIEDACSLFRQMASKGVN--PGIVIYSTILHGLFQTRRIAAAKEL 578
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y M++ +K + T+NI++ G C+N D AL +F + + +FN +I
Sbjct: 579 YLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLK 638
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ DE ++ ++ G + VT +++ L +G + + +L + + G
Sbjct: 639 GGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRM 698
Query: 333 YFGLVEKLCGEG---NAGIALEVVDE 355
LV KL +G AG+ L +DE
Sbjct: 699 LNALVGKLPQKGEVRKAGVYLSKIDE 724
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 5/300 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ S+YN ++ K + +A+ M KPDVVTFN LI+G C+ + D A +
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM G N+V++NTLI G + E V + M + T ++ G C
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCK 168
Query: 308 EGRVLKACELVIDFSRR-GVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL-WKKGNLPSV 365
G + +A + + +R G P F Y L+ LC N A E++ E+ +K SV
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+A TL++G + + A L+ ML+ G PD VT++ +++ LC G L
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++G PD +TY +LV+G + + E LV ML++G P+ TY+ DGL K
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDK 348
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 173/374 (46%), Gaps = 19/374 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ T+ +VR+ + +L + P G+ P M ++F V+A K+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQP------GMAPTPSM---YNFFVHALCKS 67
Query: 168 NRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++ + A E ++ + DG +P V +N LI G K D+A D M R ++
Sbjct: 68 GKVPE---AMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANL 124
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT+N LI+G + A+ + + M P+ ++N +I GF + D E
Sbjct: 125 VTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEE 181
Query: 286 MIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLCGE 343
M + GC + T IL++GLC + KA EL+ + R+ + LV+ C
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKA 241
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
+ A E++ + + G P V+ +T+I+GL R + L+EKM+ G PD VT+
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L+ LC G+ V+A RL G P+ +TY ++ G + ++ +L+ + D
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361
Query: 464 EGFIPDLATYNSYM 477
+G I D+ + + +
Sbjct: 362 KGRITDVVAFEALL 375
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 14/274 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F + T+ ++ L+S+ R E V+ ++ P + ++ ++ F
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTP-------------DTQTYNAIIHGF 166
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV-RDRVKP 223
K+ ++ E M++ P Y++LING K KA M+ R
Sbjct: 167 CKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCA 226
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
VV FN L+ G+C+ + D A L M E GC P+VV+++T+I G D+G +
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALL 286
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+M+ GC+ VT +LV GLC G++++AC LV G P Y + + LC
Sbjct: 287 EKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKI 346
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+A +++ + KG + V+A L+ +++
Sbjct: 347 DKLDMANDLLTSIRDKGRITDVVAFEALLLSVKK 380
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 12/305 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
Y VL+ E A+ M + + P +N + C++ K A+ + + M
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
++ C P+VV+FNTLI G + DE + EM G + VT L++GL + GR
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR- 139
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTT 370
+ E V+ P Y ++ C G A ++E+ ++ G P +
Sbjct: 140 --SGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 371 LIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST- 428
LI GL + +A L+++M+ ++ V FN L++ C + D DR R L S+
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYC---KAQDLDRARELLSSM 254
Query: 429 --KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +TY ++ G R +G L+ +M+ G PD+ TY + GL A K
Sbjct: 255 LEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKM 314
Query: 487 VRQTR 491
V R
Sbjct: 315 VEACR 319
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 171/375 (45%), Gaps = 51/375 (13%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +V SL + ++ + H + + + PE+ + VN + KA
Sbjct: 156 DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG---------HSPELV-TYATVVNGYCKA 205
Query: 168 NRMNDGLLAFEAMRKLI-DGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
R++ A MR+L GR PS S+Y+ LI+G K D+A ++ D DV
Sbjct: 206 GRIDQ---ALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDV 260
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
+ + ISG C+ K D A + +M E GC P+ VS+N +I + + E + +
Sbjct: 261 IVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQ 320
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
+E C C +LVDGLC RV +AC ++ E++ G+
Sbjct: 321 AMERKCMPGVPVCTVLVDGLCKSRRVEEACVIL-------------------ERMLETGD 361
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
PSV+ + +I+GL + + +A +++KM + G +PD VT+
Sbjct: 362 RA---------------PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTA 406
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+++ C VGR +A L +G D + Y+IL+ GY R + E ++ EM G
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466
Query: 466 FIPDLATYNSYMDGL 480
P++ + ++ +DGL
Sbjct: 467 IQPNVVSLSTIVDGL 481
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 4/326 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ F KA ++ + M K P++ + LI + DKAL + +M+ +
Sbjct: 59 IRGFCKAEQIPQAVNLLGEM-KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
VKPD + ++I C+ K DLA F M + GC P+ V++ L+ F K+++G
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ G VT +V+G C GR+ +A L+ G P Y L++ L
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A E+ + G++ VI T+ I GL + K EA + KM++ G PD
Sbjct: 238 CKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 295
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
V++N ++ LC R +A L A + P +LV G + R +E ++
Sbjct: 296 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILER 355
Query: 461 MLDEG-FIPDLATYNSYMDGLSNARK 485
ML+ G P + TY++ +DGL A +
Sbjct: 356 MLETGDRAPSVVTYSAVIDGLCKADR 381
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 8/333 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + K N+++ FE M + P Y VL++ K ++++ ++
Sbjct: 124 LYTVVIGHLCKINKLDLAASYFERMVQ-SGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P++VT+ +++G+C+ + D AL L R ++ G +P+ ++TLI G +
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 276 FDEGVNMAYEMIEL--GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE A E+ E+ G + + GLC G++ +A + + G P Y
Sbjct: 243 HDE----ARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 298
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ LC + A E++D+ ++ +P V CT L++GL + R+ EA ++E+ML+
Sbjct: 299 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 358
Query: 394 EGI-LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G P VT++ +++ LC R DA + G PD +TY ++ + + R
Sbjct: 359 TGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 418
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L M + G D+ YN + G A K
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAK 451
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 10/207 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D ++ I+ SL R SE +++ C G+ C + V+ K+
Sbjct: 294 DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC---MPGVPVCTVL-------VDGLCKS 343
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R+ + + E M + D PSV Y+ +I+G K D A +M R PDVVT
Sbjct: 344 RRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVT 403
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ +I FC+ + D A LF+ M E+GC +VV++N LIRG+ K DE + M EM
Sbjct: 404 YTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMA 463
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKA 314
G + + V+ +VDGLC E RV +A
Sbjct: 464 GRGIQPNVVSLSTIVDGLCKESRVEEA 490
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 8/191 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
++ + + K NR+++ A E M + ++ + P V + VL++G K R ++A +
Sbjct: 298 YNVIIYSLCKDNRVSE---AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354
Query: 215 RMVR--DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
RM+ DR P VVT++ +I G C+ + D A + ++MR GC P+VV++ +I F
Sbjct: 355 RMLETGDRA-PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCK 413
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ DE + M E GC V IL+ G C +V +A ++ + + RG+ P
Sbjct: 414 VGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVS 473
Query: 333 YFGLVEKLCGE 343
+V+ LC E
Sbjct: 474 LSTIVDGLCKE 484
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 7/243 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++ KA ++++ A K+I+ P YNV+I K +A D+ +
Sbjct: 267 ISGLCKAGKLDE---AKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAME 323
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN-PNVVSFNTLIRGFFGERKFD 277
+ P V +L+ G C++++ + A + M E G P+VV+++ +I G + D
Sbjct: 324 RKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLD 383
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ + +M GC VT ++D C GR+ +A EL RG Y L+
Sbjct: 384 DAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILI 443
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
C A+ +++E+ +G P+V++ +T+++GL + + EA LMEKM E L
Sbjct: 444 RGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFES-L 502
Query: 398 PDS 400
PDS
Sbjct: 503 PDS 505
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 2/259 (0%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T N L+ F + A +F++ P+ ++ TLIRGF + + VN+ EM
Sbjct: 19 TCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + VT L+ LC KA ++ V P F Y ++ LC
Sbjct: 79 KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+A + + + G LP + T L+ L + K + + E+ML +G P+ VT+ +
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 198
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ C GR A L G P G Y L+ G + +R E L + G
Sbjct: 199 VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGD 256
Query: 467 IPDLATYNSYMDGLSNARK 485
+ D+ Y S++ GL A K
Sbjct: 257 VQDVIVYTSFISGLCKAGK 275
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 7/315 (2%)
Query: 177 FEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
E R+L+DG P + YN +I+ K + ++A + + +KPD VTF
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
I G+ + K A F EM + G PN + LI G F E +++ + LG
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
TC + GL GRV +A ++ + +G++P F Y L+ C +G A
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
E+ DE+ KG P++ L++GL + A L + M ++G+ PDSVT++ +++
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +A L +KG+ P Y+ LV G +E ++ NL EML +GF L
Sbjct: 441 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 500
Query: 471 ATYNSYMDGLSNARK 485
++N+ +DG + K
Sbjct: 501 -SFNTLIDGYCKSCK 514
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+ T+ I+ +G CR K+ + A F EM++ G P+ + + LI GF E DE + +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
M+ G + +T +L+ GLC G++ KA E++ G P + L+E C
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
E N G ALE++DE+ K+ +PS ++ +I GL + A+ L+EKM G+ P+ V
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
++ L+ GR +A RL S G+ PD Y+ ++S ++ + +E + E+
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQTR 491
G PD T+ +++ G S K +
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAK 276
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 144/292 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y ++ G + + ++A ++ M + +KPD + LI GF R D L +
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M G N++++N LI G K ++ + MI LGC+ +S T +L++G C
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + +A EL+ + +R ++P Y ++ LC + +A ++++++ G P+V+
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI G + EA L++ M G+ PD +N ++ L G+ +A L
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+GL PD +T+ + GY++ + E +EMLD G +P+ Y ++G
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 163/360 (45%), Gaps = 24/360 (6%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDK 208
P+++ F ++ +K R+ + L F +++ L+ P V Y+ LI+GF K E +K
Sbjct: 323 PDVQTCSAF-IHGLLKNGRVQEALKVFSELKEKGLV---PDVFTYSSLISGFCKQGEVEK 378
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A +D M + P++ +N L+ G C++ A LF M EKG P+ V+++T+I
Sbjct: 379 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 438
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ E ++ +EM G + S LV G C EG + KA L + ++G
Sbjct: 439 GYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FA 497
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS--- 385
+ L++ C A ++ E+ K +P + TT+I+ + K EA+
Sbjct: 498 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 557
Query: 386 --------------GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
L EKM+ +G+ PD VT+ ++ C V+A +LR KG+
Sbjct: 558 KEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 617
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
G + +L++ + E L++EM + G P LA ++ + A K TR
Sbjct: 618 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 677
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V +Y+ LI G+ ++A D M V PD+ +N +IS + K + A
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
E++ +G P+ V+F I G+ K E EM++ G ++ +L++G
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G +++A + GVLP + L G AL+V EL +KG +P V
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++LI G + + +A L ++M +GI P+ +N L++ LC G A +L
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
KGL+PD +TY ++ GY + E +L +EM +G P YN+ + G
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 1/332 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C R F + + + + M L + M K + PS Y +ING C++
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLS 167
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A ++M +KP+VV ++ LI G+ + + A L M G P++ +N +I
Sbjct: 168 LANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAII 227
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
K +E E+ G + +VT + G G++ +A + + G++
Sbjct: 228 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y L+ GN AL + L G LP V C+ I GL + + EA +
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++ ++G++PD T++ L+ C G A L KG+ P+ Y+ LV G +
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L + M ++G PD TY++ +DG
Sbjct: 408 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 439
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 143/330 (43%), Gaps = 28/330 (8%)
Query: 159 FAVNAFVKANRMNDGLLA---FEAMRKLIDGRPSVSI------YNVLINGFVKCREFDKA 209
A N F+ N + DGL + RKL DG P + Y+ +I+G+ K +A
Sbjct: 391 IAPNIFI-YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M V+P +N L+ G C+ + A+ LFREM +KG +SFNTLI G
Sbjct: 450 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDG 508
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR----- 324
+ K E + EMI VT ++D C G++ +A L + R
Sbjct: 509 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 568
Query: 325 ------------GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
GV P + Y ++ C E N A ++ DE+ KG L LI
Sbjct: 569 TVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 628
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + EAS L+++M + G+ P + L+ + G+ +A R+ + GL
Sbjct: 629 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLV 688
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEML 462
PD T LV+G + ++ NL+ +++
Sbjct: 689 PDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
+G++P + Y + LC A +E+ K G P AC+ LI+G R
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
E + + M+ GI + +T+N L+ LC G+ A + T G P+ T+ +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ GY RE+ L++EM +P +Y + ++GL + +
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 164
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M E G ++ T I+ GLC R+ +A + + G+ P L++ EG+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
L + D + G ++I LI GL + K +A+ +++ M+ G P+S TF
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 406 LLEDLC---DVGRTVD--------------------------------ADRLRLLASTKG 430
L+E C ++GR ++ A++L + G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L P+ + Y L+ GY E R +E L++ M G PD+ YN+ + LS A K
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++NR+ G L MRK + P+ YN LINGF + A + M
Sbjct: 266 YNMLIHDLCRSNRIAKGYLLLRDMRKRMI-HPNEVTYNTLINGFSNEGKVLIASQLLNEM 324
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTFN LI G F AL +F M KG P+ VS+ L+ G +F
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D M G +T ++DGLC G + +A L+ + S+ G+ P Y L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A E+V +++ G P+ I +TLI R+ EA + E M+ EG
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D TFN L+ LC G+ +A+ ++ G+ P+ +++ L++GY + +
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +EM G P TY S + GL
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGL 588
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 6/318 (1%)
Query: 177 FEAMRKLIDGRPS------VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
F+A +L+D S V YN+LI+ + K M + + P+ VT+N
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+GF K +A L EM G +PN V+FN LI G E F E + M Y M G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
S V+ +L+DGLC A + R GV Y G+++ LC G A+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++E+ K G P ++ + LI G ++ + A ++ ++ + G+ P+ + ++ L+ +
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +G +A R+ +G D T+++LV+ + + E E + M +G +P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 471 ATYNSYMDGLSNARKSVR 488
+++ ++G N+ + ++
Sbjct: 544 VSFDCLINGYGNSGEGLK 561
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 11/344 (3%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID---------GRPSVSIYNVL 196
GI+ +M+ + H V N M DG + K D G P+++ YN+L
Sbjct: 703 GIYFREQMDNLGH--TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
++G+ K ++ + Y ++ + + PD +T + L+ G C + ++ L + + +G
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
+ +FN LI + + ++ M LG TC+ +V L R ++
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
++ + S++G+ P+ Y GL+ LC G+ A V +E+ P +A + ++ L
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ K EA+ L+ MLK ++P +F L+ C G ++A LR++ S GL D +
Sbjct: 941 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y++L++G + L EM +GF+ + TY + + GL
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 142/333 (42%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLIN-----------------------------------GFVKCREFDKALGF 212
P V+ +N+LIN + K F A+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D M V DV T+N+LI CR+ + L R+MR++ +PN V++NTLI GF
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E K + EM+ G + VT L+DG +EG +A ++ +G+ P +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC +A + + G I T +I+GL + EA L+ +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+GI PD VT++ L+ C VGR A + GL P+G+ Y L+ R K
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + M+ EG D T+N + L A K
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS Y VL++G K EFD A GFY RM R+ V +T+ +I G C+N D A+ L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G +P++V+++ LI GF +F + + +G + + L+ C
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + G F + LV LC G A E + + G LP+ ++
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G +G++A + ++M K G P T+ LL+ LC G +A++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
D + Y+ L++ + + +L EM+ +PD TY S + GL K+V
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 165/431 (38%), Gaps = 88/431 (20%)
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS 143
H Q HI A D RH + S SS+ F L + ++NP
Sbjct: 70 HIVQLVCITTHILVRARMYDPARHILKELSLM--SGKSSFVFGALMTTYRLCNSNP---- 123
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
++ + +++ + D L F M L PSV N ++ VK
Sbjct: 124 -----------SVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKS 171
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
E F M++ ++ PDV TFNILI+ C F+ + L ++M + G P +V++
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NT++ + + +F + + M G + T +L+ LC R+ K L+ D +
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
R + P + Y TLI G K +
Sbjct: 292 RMIHPNEVTY-----------------------------------NTLINGFSNEGKVLI 316
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
AS L+ +ML G+ P+ VTFN L++ G +A ++ + KGL P ++Y +L+
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 444 G-------------YTRENRR----------------------KEGENLVNEMLDEGFIP 468
G Y R R E L+NEM +G P
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 469 DLATYNSYMDG 479
D+ TY++ ++G
Sbjct: 437 DIVTYSALING 447
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K +++ ++ M K DG P + Y+ LINGF K F A R+ R
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSK--DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+ + ++ LI CR A+ ++ M +G + +FN L+ K E
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M G ++V+ + L++G N G LKA + + ++ G P F Y L++
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+ A + + L + TL+ + + +A L +M++ ILPD
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDPDGMTYHILVSGYTRENRRKEGENLV 458
S T+ L+ LC G+TV A A +G + P+ + Y V G + + K G
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+M + G PD+ T N+ +DG S K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ IY+ LI + +A+ Y+ M+ + D TFN+L++ C+ K A
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M G PN VSF+ LI G+ + + ++ EM ++G + T L+ GLC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + + Y L+ +C GN A+ + E+ ++ LP
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG-ILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI GL R K V A ++ G +LP+ V + C ++ + G+ R
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +T + ++ GY+R + ++ +L+ EM ++ P+L TYN + G S RK
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK-RKD 769
Query: 487 VRQT 490
V +
Sbjct: 770 VSTS 773
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NVL+ K + +A F M D + P+ V+F+ LI+G+ + + A +F EM
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G +P ++ +L++G E + + +V L+ +C G +
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTL 371
KA L + +R +LP + Y L+ LC +G IA+ E +GN LP+ + T
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
++G+ + + E+M G PD VT N +++ +G+ + L +
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+ GY++ L ++ G +PD T +S + G+
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +Y ++G K ++ + F ++M PD+VT N +I G+ R K + L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + PN+ ++N L+ G+ + + +I G +TC LV G+C
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +++ F RGV + + L+ K C G A ++V + G
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C ++ L R + E+ ++ +M K+GI P+S + L+ LC VG A ++
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ P + +V + + E L+ ML +P +A++ + M
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
CN N ++ LIR + E + + + M G S TC ++ + G +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ + +R + P + L+ LC EG+
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFE---------------------------- 210
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
++S LM+KM K G P VT+N +L C GR A L +KG+D D
Sbjct: 211 -------KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY++L+ R NR +G L+ +M P+ TYN+ ++G SN K
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V A K + ++ LL F KL+ P+++ + L++ K +AL M
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLV---PTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K D+V++N+LI+G C LA L+ EM+ G N ++ LIRG
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1052
Query: 279 GVNM 282
G ++
Sbjct: 1053 GADI 1056
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 12/221 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T +V L ++RF E VL+ S GI PE R + +N +
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLH-------EMSKQGI--SPE-SRKYIGLINGLCRV 907
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + E M P+V+ + ++ KC + D+A M++ ++ P + +
Sbjct: 908 GDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F L+ C+N AL L M G ++VS+N LI G + + EM
Sbjct: 967 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVI-DFSRRGVL 327
G ++ T + L+ GL ++++ D RG +
Sbjct: 1027 GDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 143/293 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R V +N L++G+ K + + AL RM V DVV +N L++G CR + D A G
Sbjct: 198 RLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARG 257
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M+ G PNVV++ T I D+ ++ EM+ +G VT LVDGLC
Sbjct: 258 MLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLC 317
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR +A L + + G P Y L++ L + ++ E+ +G + ++
Sbjct: 318 RAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLV 377
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+L++ L + K E + L + P+ VT+ L++ LC G A+++ L
Sbjct: 378 MYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEM 437
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K + P+ +T+ +++G T++ + + + +M + G P++ TY + MDG
Sbjct: 438 EDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDG 490
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 4/283 (1%)
Query: 203 CR--EFDKALGFYDRMVRDRV--KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
CR + + A + MVR R + DVV +N L+ G+C++ + AL + MR +G
Sbjct: 175 CRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGV 234
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+VV +NTL+ G + D M M G E + VT + C V A L
Sbjct: 235 DVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLY 294
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ R GVLP LV+ LC G A + E+ K G P+ + TLI+ L +
Sbjct: 295 EEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKA 354
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
R+G E+ GL+ +++ G++ D V + L++ L G+ + + A + P+G+TY
Sbjct: 355 RRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTY 414
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+L+ R E ++ EM D+ P++ T++S ++GL+
Sbjct: 415 TVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLT 457
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 38/366 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V +A + E M+ DG P+V Y I + D A Y+
Sbjct: 239 YNTLVAGLCRAGEADAARGMLETMKG--DGVEPNVVTYTTFIAECCRTNAVDDAFSLYEE 296
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MVR V PDVVT + L+ G CR +F A LFREM + G PN V++ TLI + R+
Sbjct: 297 MVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARR 356
Query: 276 FDEGVNMAYEMIELG-----------------------------CEFS------SVTCEI 300
E + E++ G C S VT +
Sbjct: 357 GSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTV 416
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L+D LC G V A +++++ + V P + ++ L +G G A + + ++ ++G
Sbjct: 417 LIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERG 476
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+V+ T+++G + ++ A L +ML EG+ + + L+ L G+ +A+
Sbjct: 477 IDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAE 536
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + +G+ D + Y L+ G + + E+ + PD YN +++ L
Sbjct: 537 ALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCL 596
Query: 481 SNARKS 486
KS
Sbjct: 597 CMLGKS 602
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 123/274 (44%), Gaps = 5/274 (1%)
Query: 216 MVRDRVKPDVVTFNILISGFC-RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++R D V++N++ISG + + LA L EM ++G + V+ NT + +
Sbjct: 119 LLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDG 178
Query: 275 KFDEGVNMAYEMIELGCE---FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ EG EM+ G E V L+DG C G + A +GV
Sbjct: 179 QV-EGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVV 237
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y LV LC G A A +++ + G P+V+ TT I R +A L E+M
Sbjct: 238 GYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEM 297
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
++ G+LPD VT + L++ LC GR +A L G P+ +TY L+ + R
Sbjct: 298 VRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRG 357
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L+ E++ G + DL Y S MD L K
Sbjct: 358 SESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGK 391
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV-K 166
+H T+ ++ SL + R SE H +L + + G+ M+ + + ++ ++ K
Sbjct: 340 NHVTYCTLIDSLWKARRGSESHGLLGEVVSR-------GVV----MDLVMYTSLMDWLGK 388
Query: 167 ANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
++++ F L D P+ Y VLI+ + D A M V P+V
Sbjct: 389 QGKIDEVKDMFHC--ALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNV 446
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTF+ +I+G + A R+M+E+G +PNVV++ T++ GFF ++ + +++ +E
Sbjct: 447 VTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHE 506
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M+ G E + ++LV+GL G++ +A L D ++RG+L +Y L++ L GN
Sbjct: 507 MLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGN 566
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
A +V EL ++ P + + L L K EA ++
Sbjct: 567 MPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 145/327 (44%), Gaps = 35/327 (10%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI--------FHF 159
D T +V L + RFSE +++ EME+I +
Sbjct: 305 DVVTLSALVDGLCRAGRFSEAYALFR------------------EMEKIGAAPNHVTYCT 346
Query: 160 AVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+++ KA R ++ GLL R ++ + +Y L++ K + D+ + +
Sbjct: 347 LIDSLWKARRGSESHGLLGEVVSRGVV---MDLVMYTSLMDWLGKQGKIDEVKDMFHCAL 403
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
D P+ VT+ +LI CR D A + EM +K +PNVV+F+++I G +
Sbjct: 404 SDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLG 463
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGL--CNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + +M E G + + VT ++DG C E A +L + GV F
Sbjct: 464 KAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQE--SALDLYHEMLCEGVEVNKFIVDL 521
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV L G A + ++ K+G L + TTLI+GL ++ A + +++ +
Sbjct: 522 LVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERN 581
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRL 422
+ PD+V +N + LC +G++ +A+ +
Sbjct: 582 LSPDAVVYNVFVNCLCMLGKSKEAESI 608
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 36/359 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ +++ + + F MR + P V YN L+NG+ K +AL + +
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAM-GLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 1286
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK- 275
R + P V+T+NILI G+CR + A L EM E+GC PNV ++ L++G R
Sbjct: 1287 RRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSL 1346
Query: 276 ------FDE------------------------GVNMAYEMIEL----GCEFSSVTCEIL 301
FDE + A+E+ E+ G +VT IL
Sbjct: 1347 AMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNIL 1406
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GLC G + A EL + G+ P Y L+ C G A ++ + + G
Sbjct: 1407 IHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGL 1466
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
LPS + T +I R A G KML+EG+ P+ +T+N L+ LC +GRT A
Sbjct: 1467 LPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASH 1526
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+GL + TY +L+ G + ++ EM G PD T+ + + G
Sbjct: 1527 HFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 142/317 (44%), Gaps = 2/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + + + E MR + + S YN LI G + K M
Sbjct: 1159 YNVVITGLTRKGDLEEAAELVEGMR--LSKKASSFTYNPLITGLLARGCVKKVYDLQLEM 1216
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P VVT+N +I G ++ + A F EMR G P+V+++N+L+ G+
Sbjct: 1217 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 1276
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + ++ G + +T IL+DG C G + +A L + +G LP Y L
Sbjct: 1277 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 1336
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ + +A E DE+ KG P A T I L A L E ++ EGI
Sbjct: 1337 MKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGI 1396
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D+VT+N L+ LC G DA L++ + GL PD +TY L+ + +E
Sbjct: 1397 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 1456
Query: 457 LVNEMLDEGFIPDLATY 473
+ N M+ +G +P T+
Sbjct: 1457 IFNNMISDGLLPSAVTF 1473
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 152/325 (46%), Gaps = 15/325 (4%)
Query: 168 NRMNDGLLAFEAMRKLIDGR---------PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N + GLLA ++K+ D + P+V YN +I+G ++ + A + M
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRA 1253
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ PDV+T+N L++G+C+ AL LF ++R G P V+++N LI G+ +E
Sbjct: 1254 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 1313
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM E GC + T IL+ G N + A E + +G+ P D F
Sbjct: 1314 ARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP---DCFAYNT 1370
Query: 339 KLCGE---GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++C E G+ A E+ + L +G + LI GL + +A L KM+ G
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 1430
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +T+ CL+ C+ G +A ++ + GL P +T+ +++ Y R
Sbjct: 1431 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 1490
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ML+EG P+ TYN + L
Sbjct: 1491 GWFRKMLEEGVEPNEITYNVLIHAL 1515
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 10/322 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++F+K R + + + M G P+ YNV+I G + + ++A +
Sbjct: 1122 YNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEG 1181
Query: 216 MVRDRVKPDVVTFNILISGF----CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
M R K T+N LI+G C K +DL L EM +G P VV++N +I G
Sbjct: 1182 M-RLSKKASSFTYNPLITGLLARGCVKKVYDLQL----EMENEGIMPTVVTYNAMIHGLL 1236
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ EM +G +T L++G C G + +A L D R G+ P
Sbjct: 1237 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 1296
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L++ C G+ A + +E+ ++G LP+V T L++G +R A ++M
Sbjct: 1297 TYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
L +G+ PD +N + +G A LR + +G+ D +TY+IL+ G +
Sbjct: 1357 LSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNL 1416
Query: 452 KEGENLVNEMLDEGFIPDLATY 473
K+ + L +M+ G PD TY
Sbjct: 1417 KDAKELQMKMVSNGLQPDCITY 1438
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L + M V PDV N ++ ++D + EM E G P++V++NTL+
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128
Query: 270 FFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
F E + D+ + EM G C + VT +++ GL +G + +A ELV + R
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELV-EGMRLSKK 1187
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG-VEASG 386
F Y L+ L G ++ E+ +G +P+V+ +I GL L+ G VEA+
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGL--LQSGLVEAAQ 1245
Query: 387 L-MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
+ +M G+LPD +T+N LL C G +A L GL P +TY+IL+ GY
Sbjct: 1246 VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGY 1305
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
R +E L EM ++G +P++ TY M G N R
Sbjct: 1306 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVR 1344
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 3/290 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V N ++ +D ++ M+ ++P +VT+N L+ F + + D L
Sbjct: 1082 PDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAML 1141
Query: 248 FREM--REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+EM R GC PN V++N +I G + +E + E + L + SS T L+ GL
Sbjct: 1142 LKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELV-EGMRLSKKASSFTYNPLITGL 1200
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G V K +L ++ G++P Y ++ L G A E+ G LP V
Sbjct: 1201 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 1260
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +L+ G + EA L + + G+ P +T+N L++ C +G +A L+
Sbjct: 1261 ITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEE 1320
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+G P+ TY IL+ G +EML +G PD YN+
Sbjct: 1321 MGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
++ ++ K + D A E K++ +P Y LI+ + +A ++
Sbjct: 1403 YNILIHGLCKTGNLKD---AKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFN 1459
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ D + P VTF ++I +CR A G FR+M E+G PN +++N LI
Sbjct: 1460 NMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 1519
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +EM+E G + T +L+DG C G A + + G+ P +
Sbjct: 1520 RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHK 1579
Query: 335 GLVEKLCGEGNAGIALEVVDEL 356
L++ +G+ +E +D +
Sbjct: 1580 ALLKGF--DGHVHHTIEYLDNV 1599
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 12/299 (4%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N L++ K R KA R + R PDVVT+N L G+CR K AL L R+M
Sbjct: 172 LFNSLLDALGKSRHASKAASLV-RALERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQM 230
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-----CEFSSVTCEILVDGLC 306
E G P ++N +++GFF + N +M + G C+ V+ ++ GL
Sbjct: 231 AESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLG 290
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ KA +L + S+ G P Y L++ +C +GN A+ V D++ +K +P+V+
Sbjct: 291 VAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVV 350
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T LI GL + K A LME+M EG P T+N L+ + G A L
Sbjct: 351 TYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHL-FER 409
Query: 427 STKGLD--PDGMTYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYMDGL 480
+KG + P+ TY+I++S R ++ +V EM++ G++P N ++GL
Sbjct: 410 MSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNGL 468
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ YN LI K + A+ +D M+R P+VVT+ +LI G C K D A+ L
Sbjct: 312 PTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKL 371
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDGL 305
M+ +GC P V ++N LIR F E + D+ +++ +E + G C + T I++ +
Sbjct: 372 MERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHL-FERMSKGEECLPNQDTYNIVISAM 430
Query: 306 CNEGR---VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
R + A +V++ RG LP+ F ++ L GN ++ +++
Sbjct: 431 FVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQLSRDLL 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 8/227 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKL----IDGRPSVSIYNVLINGFVKCREFDKALGF 212
++ + F +A ++ F M+K + +P V Y +I+G + DKA
Sbjct: 242 YNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKL 301
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M ++ P + T+N LI C+ + A+ +F +M K PNVV++ LIRG
Sbjct: 302 FDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCH 361
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR-RGVLPKDF 331
K D + + M GCE T +L+ EG + KA L S+ LP
Sbjct: 362 VGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQD 421
Query: 332 DYFGLVEKLCGEGNA---GIALEVVDELWKKGNLPSVIACTTLIEGL 375
Y ++ + A IA +V E+ ++G LP ++ GL
Sbjct: 422 TYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNGL 468
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 43/266 (16%)
Query: 227 TFNILISGFCRNKKF-DLALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
TF IL F +++ D+A+ LF + R ++ FN+L+ R + ++
Sbjct: 135 TFPILFERFAASQRRPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLV- 193
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+E VT L DG C +A +L+ + G+ P Y +++ G
Sbjct: 194 RALERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAG 253
Query: 345 NAGIALEVVDELWKKGNL-----PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
A ++ K+G+ P V++ TT+I GL + +A L ++M KEG P
Sbjct: 254 QLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPT 313
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T+N L++ +C KG D +T + +
Sbjct: 314 IATYNALIQVICK----------------KGNVEDAVT-------------------VFD 338
Query: 460 EMLDEGFIPDLATYNSYMDGLSNARK 485
+M+ + +IP++ TY + GL + K
Sbjct: 339 DMIRKDYIPNVVTYTVLIRGLCHVGK 364
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 155/328 (47%), Gaps = 3/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ F ++ + FE MR K I+ V +Y +I+ + +AL +D
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEA--DVYVYTSIISCNCRSGNVKRALVLFDE 355
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P T+ LI G C+ + + A L EM+ KG + N V FNTLI G+
Sbjct: 356 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + + M + G E + GLC R +A L+ RGV P +
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C EGN A V E+ +KGN+P++I LI+G + EA L +++ G
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
++PD T L+ C G+ A +L +GL P+ +TY ++SG +++ R +E
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L +EM + G PD Y+S + L +A
Sbjct: 596 KLYDEMKETGLTPDDTVYSSLVGSLHSA 623
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 202/477 (42%), Gaps = 52/477 (10%)
Query: 25 SIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHH 84
S L S T PS+ + + HL+ L H+LT + HF++ K ++
Sbjct: 31 SKTLVSSGAKSLQTTPSLLSSLNSQTVHLI--LSNHILTAE----SCLDFFHFIR-KNYY 83
Query: 85 HPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN 144
P Y IF + S + L S +F+E+ + N C +
Sbjct: 84 KPDLRAYITLIFKLYRSRKSDK------------LHKSQKFAEIRHLFN------CAAVD 125
Query: 145 DGIF------------SCPE--------MERIFHFAVNAFVKANRMNDGLLAFEAMRKL- 183
DG+ +C E E+ F + + L AFE M K
Sbjct: 126 DGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKG 185
Query: 184 --IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
ID R + V + + + D L F+ RMV V+ V + I++ G C+
Sbjct: 186 FHIDERSCL----VYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDV 241
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
++ L E+ KG NVV++N I G+F + M + G + VT +L
Sbjct: 242 EMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLL 301
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ G N G++ +A L + +G+ + Y ++ C GN AL + DE+ KG
Sbjct: 302 IHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGL 361
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+PS LI G+ + + A L+ +M +GI + V FN L++ C+ G +A R
Sbjct: 362 IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALR 421
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
L+++ KGL+ D Y+ + SG + NR+ E + L+ M++ G P+ ++ + +D
Sbjct: 422 LQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLID 478
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%)
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+R K F++L + NK F AL F M +KG + + S + + D
Sbjct: 149 NRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDS 208
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ M+ L E + + I++DGLC G V +L+ + + +GV Y +E
Sbjct: 209 CLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIE 268
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ G E++ + K+G +V+ T LI G + K EA L E+M ++GI
Sbjct: 269 GYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA 328
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D + ++ C G A L + KGL P TY L+ G + + + + LV
Sbjct: 329 DVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLV 388
Query: 459 NEMLDEGFIPDLATYNSYMDG 479
NEM +G + +N+ +DG
Sbjct: 389 NEMQGKGIDLNPVIFNTLIDG 409
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 208/474 (43%), Gaps = 52/474 (10%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTL------PSVTLTPTAHHTHLLRFLKTHLLTPTNNQIT 70
+ PP A ++ T TL PS+ TP +T +L+ L H
Sbjct: 23 TTSPPEATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNT-ILKRLWNH---------G 72
Query: 71 PSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHS 130
P +L HF K L HHP + H F A I + D T F+V + S
Sbjct: 73 PKAL-HFFKI-LSHHPSYCH-QASSFDHAIDICARLRDFRTLWFLVSRMRSC-------- 121
Query: 131 VLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV 190
P P R F + + + + F +M + +
Sbjct: 122 -----RLGPSP-------------RTFAIIAERYAAMGKPHRAVTVFMSMHEY-GCFQDL 162
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S +N +++ K + + A + + ++ + K D V++NI+++G+C K+ AL + +E
Sbjct: 163 SSFNTILDVLCKSKRVEMAYNLF-KALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKE 221
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M E+G PN+ ++N ++ G+F + +E EM + C+ VT ++ GL G
Sbjct: 222 MVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGE 281
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ +A + + GVLP + L++ LC + + A+ + +E+ K+G +P+ I
Sbjct: 282 IKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNL 341
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
+I GL + + A LME+M + P+ T+N L+ CD G L
Sbjct: 342 VIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGD 401
Query: 431 LDPDGMTYHILV-SGYTRENRRK---EGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+ S + R+N G+ LV EM+D GF+P T+N +DGL
Sbjct: 402 CLPNLDTYNILINSMFVRKNSDNLLVAGKLLV-EMVDRGFLPRKLTFNRVLDGL 454
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV+ +N LI K + A+ ++ MV+ P+ +T+N++I G C + A+ L
Sbjct: 299 PSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMEL 358
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC- 306
M + C PNV ++N LIR F + ++G+++ +M C + T IL++ +
Sbjct: 359 MERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFV 418
Query: 307 --NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
N +L A +L+++ RG LP+ + +++ L GN A E++ G LP
Sbjct: 419 RKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLP 477
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 132/314 (42%), Gaps = 46/314 (14%)
Query: 182 KLIDGRPS----VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
K++ PS S ++ I+ + R+F RM R+ P TF I+ +
Sbjct: 80 KILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAA 139
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE-LGCEFSS- 295
K A+ +F M E GC ++ SFNT++ ++ V MAY + + L +F +
Sbjct: 140 MGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKR----VEMAYNLFKALKGKFKAD 195
Query: 296 -VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
V+ I+V+G C R KA E++ + RG+ P Y ++ G A
Sbjct: 196 CVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFL 255
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
E+ K+ V+ T++I GL + + A + +M+K+G+LP TFN L++ LC
Sbjct: 256 EMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCK-- 313
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
D + IL+ EM+ G++P+ TYN
Sbjct: 314 ------------------KDSVENAILI---------------FEEMVKRGYVPNSITYN 340
Query: 475 SYMDGLSNARKSVR 488
+ GL + + R
Sbjct: 341 LVIRGLCHVGEMQR 354
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V +YN +I+ K + A Y M+ + P+VVT+N L+ GFC A
Sbjct: 200 KPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFS 259
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM+ K NP+V +FNTLI E K + M++ + VT L+DG
Sbjct: 260 LLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYF 319
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+V A + ++ GV P Y +++ LC E A+ + +E+ K +P ++
Sbjct: 320 FLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIV 379
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+GL + A L +KM ++GI PD ++ LL+ LC GR +A
Sbjct: 380 TYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRL 439
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG + TY+++++G + + E +L ++M +G +PD T+ + + L
Sbjct: 440 LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 149/347 (42%), Gaps = 24/347 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A K +M + M K +P V YN LI+G+ + A + M
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACI-KPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V P+V T+ +I G C+ K D A+ LF EM+ K P++V++ +LI G
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + +M E G + + IL+D LC GR+ A E +G Y +
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI---------------------EGL 375
+ LC G A+++ ++ KG +P I T+I GL
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514
Query: 376 RRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+ RK EA ++ M K I PD VT+ L++ V A + + G+ P
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ Y I++ G ++ E +L EM + P++ TY S +D L
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDAL 621
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 2/292 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y LING K E ++ VKPDVV +N +I C+NK A L+ EM
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG +PNVV++N L+ GF E ++ EM T L+D L EG+ +
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK-M 289
Query: 313 KACELVIDFSRRGVLPKDF-DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
KA ++V+ + + D Y L++ A V + + G P+V TT+
Sbjct: 290 KAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+GL + + EA L E+M + ++PD VT+ L++ LC A L +G+
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
PD +Y IL+ + R + + +L +G+ ++ TYN ++GL A
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N +++ V + + + + + + PD+ T NIL++ FC A + +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G +PN ++ NTLI+G + + + +++ G + + V+ L++GLC G
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
L+ V P Y ++ LC G A ++ E+ KG P+V+ L+
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + EA L+ +M + I PD TFN L++ L G+ A + + +
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
PD +TY+ L+ GY N+ K + + M G P++ TY + +DGL +
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEK 357
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 23/315 (7%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN L+ GF +A + M + PDV TFN LI + K A +
Sbjct: 236 PNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIV 295
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + P+VV++N+LI G+F K + Y M + G + T ++DGLC
Sbjct: 296 LAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCK 355
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E V +A L + + ++P Y L++ LC + A+ + ++ ++G P V +
Sbjct: 356 EKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 415
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L++ L + + A +++L +G + T+N ++ LC +A L+
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-------------------- 467
KG PD +T+ ++ ++ + E ++ EM+ G
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535
Query: 468 ---PDLATYNSYMDG 479
PD+ TY + MDG
Sbjct: 536 CIKPDVVTYGTLMDG 550
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 150/337 (44%), Gaps = 26/337 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++A K R+ + F+ R L+ G +V YNV+ING K F +A+ +
Sbjct: 416 YTILLDALCKGGRLENAKEFFQ--RLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK 473
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN------------------ 257
M PD +TF +I + D A + REM +G
Sbjct: 474 MEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMT 533
Query: 258 -----PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
P+VV++ TL+ G+F + + Y M ++G + I++DGLC + V
Sbjct: 534 KACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVD 593
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + + + P Y L++ LC + A+ ++ E+ + G P V + T L+
Sbjct: 594 EAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILL 653
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + + A + +++L +G + + ++ +LC G +A L+ KG
Sbjct: 654 DGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCM 713
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
PD +T+ I++ ++ + E ++ EM+ G + +
Sbjct: 714 PDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 29/314 (9%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V Y +L++ K + A F+ R++ +V T+N++I+G C+ F A+
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD 469
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS----------- 295
L +M KGC P+ ++F T+I F + + D+ + EMI G + +
Sbjct: 470 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529
Query: 296 ------------VTCEILVDG--LCNEGRVLKACELVI-DFSRRGVLPKDFDYFGLVEKL 340
VT L+DG L NE LK + V ++ GV P Y +++ L
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNE---LKHAKYVFYSMAQMGVTPNVQCYTIMIDGL 586
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C + A+ + +E+ K P+++ T+LI+ L + A L+++M + GI PD
Sbjct: 587 CKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDV 646
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
++ LL+ LC GR A + KG + Y +++ + E +L +
Sbjct: 647 YSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXK 706
Query: 461 MLDEGFIPDLATYN 474
M D+G +PD T++
Sbjct: 707 MEDKGCMPDAVTFD 720
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ +DRM+ R P FN ++S NK + + LF++ G P++ + N L+
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
F C + +T A ++ + +RG P
Sbjct: 107 CF--------------------CHLTHITF---------------AFSVLANILKRGYHP 131
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
L++ LC G AL D++ +G + ++ TLI GL + + + L+
Sbjct: 132 NAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
K+ + PD V +N ++ LC DA L KG+ P+ +TY+ LV G+
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE +L+NEM + PD+ T+N+ +D L K
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 139/292 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V IYN +I+ KCR +AL +M PD +TF+ LISG C+ + A L
Sbjct: 362 PNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERL 421
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
RE NPN+ S+ +LI GF + N+ EM+E G VT L+ GL
Sbjct: 422 LRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVV 481
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+V +A + + R +LP Y L+ LC + A +++E+ ++ P
Sbjct: 482 AGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYV 541
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+G R EA + E M ++GI PD V +N +++ C G +A
Sbjct: 542 YTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR 601
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G PD TY L+ GY ++ +L+ +M+ P++ Y+S ++G
Sbjct: 602 KVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLING 653
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 140/304 (46%), Gaps = 6/304 (1%)
Query: 182 KLIDGR------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF 235
KLI+ R P+ YNVLI+G+ + + + + M + P VVT+ L+S
Sbjct: 280 KLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWL 339
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
R + L EMRE+ PNV +N++I R + + + +M GC+ +
Sbjct: 340 GRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDA 399
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
+T L+ GLC EGRV +A L+ + +R + P Y L+ C G +A ++ E
Sbjct: 400 ITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVE 459
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
+ ++G+ P V+ LI GL + EA + EKM +LPD+ +N L+ LC
Sbjct: 460 MMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKM 519
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
A L + + PD Y L+ G+ R E + M +G PD+ YN+
Sbjct: 520 LPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNA 579
Query: 476 YMDG 479
+ G
Sbjct: 580 MIKG 583
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 156/348 (44%), Gaps = 22/348 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ V A ++++ LL E M R+L+ P +IYNVLI+G K + A +
Sbjct: 472 FGALIHGLVVAGQVSEALLVREKMAARQLL---PDANIYNVLISGLCKKKMLPAARNLIE 528
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ V PD + LI GF RN+ D A +F M +KG +P+VV +N +I+G+
Sbjct: 529 EMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFG 588
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E V M ++G T L+ G +G + A L+ D +R P Y
Sbjct: 589 MMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYS 648
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C G+ A + + +G P+VI T LI L + K V A+ E ML
Sbjct: 649 SLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLN 708
Query: 395 GILPDSVTFNCLLEDLCDV----------------GRTVDADRLRLLASTKGLDPDGMTY 438
P+ T + L+ LC+ G+ D R L + + DP Y
Sbjct: 709 QCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDR-CDPRNSAY 767
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ ++ N E +L N+M ++G+ PD AT+ S + G + KS
Sbjct: 768 NAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKS 815
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V + LI+G V + +AL ++M ++ PD +N+LISG C+ K A L
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM E+ +P+ + TLI GF DE + M + G V ++ G C
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A E + + G +P +F Y L+ +GN AL ++ ++ K+ P+V+A
Sbjct: 587 FGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVA 646
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
++LI G +L A L M +G+ P+ +T+ L+ L + V A
Sbjct: 647 YSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYML 706
Query: 428 TKGLDPDGMTYHILVSG 444
P+ T H LV+G
Sbjct: 707 LNQCSPNDYTLHSLVTG 723
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 136/321 (42%), Gaps = 41/321 (12%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+D A YD M+ + D + +++ G C + L L GC PN V +N
Sbjct: 240 WDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNV 299
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
LI G+ G+ + EM G + VT L+ L +G + K L+ + R
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---------- 375
+ P Y +++ LC +A AL V+ +++ G P I +TLI GL
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419
Query: 376 RRLRKG-------------------------VEASGLMEKMLKEGILPDSVTFNCLLEDL 410
R LR+ + AS L+ +M++ G PD VTF L+ L
Sbjct: 420 RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGL 479
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
G+ +A +R + + L PD Y++L+SG ++ NL+ EML++ PD
Sbjct: 480 VVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDK 539
Query: 471 ATYNSYMDG------LSNARK 485
Y + +DG L ARK
Sbjct: 540 YVYTTLIDGFIRNESLDEARK 560
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 130/300 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++S Y LI+GF E A M+ PDVVTF LI G + AL +
Sbjct: 432 PNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLV 491
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + P+ +N LI G ++ N+ EM+E L+DG
Sbjct: 492 REKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIR 551
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A ++ ++G+ P Y +++ C G A+E + + K G +P
Sbjct: 552 NESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFT 611
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI G + A L+ M+K P+ V ++ L+ C +G T A+ L
Sbjct: 612 YTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSME 671
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
++GL P+ +TY IL+ ++++ ML P+ T +S + GL N+ S+
Sbjct: 672 SQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 380 KGVEASGLMEKMLK-------EGILPDSVTFNCLLEDLC---DVGRTVDADRLRLLASTK 429
+G+ GL+EK LK G +P++V +N L++ C DVGR + L K
Sbjct: 267 RGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGI---LLLGEMEAK 323
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
GL P +TY L+S R+ ++ +L++EM + P++ YNS +D L R +
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSA 380
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 38/336 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I++ + +VK + F+ MRK+ D RPS+ Y+ LI G + + +A +
Sbjct: 194 IYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELF 253
Query: 214 DRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ M+ +DR+ PD +T+N+LI GFCR + + A +F MR+ C PN ++ TLI
Sbjct: 254 EDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI----- 308
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+G C +G V A + + R GV P
Sbjct: 309 ------------------------------NGHCKKGEVEAARGVFEEMIRSGVQPDAVS 338
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y LV LC GN + +V E+W+KG V+ L+EGL + R+ EA L+EK+
Sbjct: 339 YTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLP 398
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
EG+ + ++ ++ LC G A L + +G P ++L+ G R
Sbjct: 399 SEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVS 458
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + ++D GF+P+ + ++ + RK R
Sbjct: 459 DATVTLYGLVDTGFMPEARCWARLIESVFRERKLRR 494
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F + ++ F MRK + P+ Y LING K E + A G ++ M
Sbjct: 269 YNLLIGGFCRLGQVEKAQSIFGFMRK-NECEPNAFNYATLINGHCKKGEVEAARGVFEEM 327
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R V+PD V++ L+ CR+ D + L +EM +KGC +VV++N L+ G +R+
Sbjct: 328 IRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRI 387
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + ++ G + + + I+++ LC+ G + KA L+ RG +P L
Sbjct: 388 AEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNML 447
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ LC G A + L G +P LIE + R RK + L++ ++ EG
Sbjct: 448 LIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLRRSIELLDVLIAEG 506
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 15/270 (5%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F +F D D T+ ++ + + S+ F+ N C
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECE----------- 298
Query: 153 MERIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
F++A +N K + FE M + +P Y L+ + D+ +
Sbjct: 299 -PNAFNYATLINGHCKKGEVEAARGVFEEMIR-SGVQPDAVSYTSLVGCLCRHGNVDEGI 356
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M + K DVVT+N+L+ G C++++ A+ L ++ +G NV S+ ++
Sbjct: 357 NLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCL 416
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ ++ + M+ G +L+ GLC+ GRV A + G +P+
Sbjct: 417 CSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEA 476
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+ L+E + E ++E++D L +G
Sbjct: 477 RCWARLIESVFRERKLRRSIELLDVLIAEG 506
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 25/310 (8%)
Query: 175 LAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+AF+ + K++ G+ P S Y+ +I + + +KA + M V PDV T+ IL
Sbjct: 271 MAFQII-KVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I FC+ + A F EMR GC+ NVV++ L+ + ++ + ++ MI+ GC
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+++T LVDGLC G + KACE+ + DF YF G+ IA
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDF-YFE------GKHTDSIA- 441
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
P+V+ LI+GL + K V+A L++ ML G P+ + ++ L++
Sbjct: 442 ------------PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C VG+ +A + L S G P TY L+ ++ R ++++M++ P++
Sbjct: 490 CKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNV 549
Query: 471 ATYNSYMDGL 480
TY + +DGL
Sbjct: 550 VTYTAMIDGL 559
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 164/341 (48%), Gaps = 17/341 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +++F KA + F+ MR I +V Y L++ ++K ++ +A ++RM
Sbjct: 326 YTILIDSFCKAGLIEQARSWFDEMRS-IGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN----------------PNV 260
+ P+ +T++ L+ G C+ + A ++ ++ N PNV
Sbjct: 385 IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
V++ LI G K + + M+ GCE + + + L+DG C G++ A E+ +
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
S+ G LP Y L++ + + +A++V+ ++ + P+V+ T +I+GL R+ +
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A L+ M ++G P+ VT+ L++ L G+ + +L + STKG P+ +TY +
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRV 624
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L++ E +L++EM + L Y S + G S
Sbjct: 625 LINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFS 665
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 20/334 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
A K R +D L+ E R+ D + + +I+G ++ FD+A+ F RM +
Sbjct: 82 AQALCKEGRWSDALVMIE--RE--DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNS 137
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+VVT+ L++GF + K+ + M ++GCNPN FN+L+ + R +
Sbjct: 138 CIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAY 197
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGR-----VLKACELVID--FSRRGVLPKDFDY 333
+ M + GC V I + +C +L E V + + VL K +
Sbjct: 198 KLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNK-VNT 256
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LCG G +A +++ + KG +P + +I L K +A L ++M
Sbjct: 257 ANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 316
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPDGMTYHILVSGYTREN 449
G+ PD T+ L++ C G A D +R + G + +TY L+ Y +
Sbjct: 317 VGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSI----GCSANVVTYTALLHAYLKAK 372
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ + ++ N M+D G P+ TY++ +DGL A
Sbjct: 373 QLPQASDIFNRMIDAGCPPNTITYSALVDGLCKA 406
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 24/370 (6%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
DS + T+ ++ L +++ + +L+ + +N C I+ ++
Sbjct: 438 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN----------GCEPNHIIYDALID 487
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F K ++++ F M K P+V Y LI+ K R D A+ +MV
Sbjct: 488 GFCKVGKIDNAQEVFLRMSK-CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCT 546
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+VVT+ +I G CR + AL L M EKGC+PNVV++ LI G K D + +
Sbjct: 547 PNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQL 606
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD-YFGLVEKLC 341
+M GC + VT +L++ C G + +A L+ + ++ PK Y +V+
Sbjct: 607 FIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM-KQTYWPKYLQGYCSVVQGFS 665
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
+ A + L ++EL G +P LI+ + + EA L ++M++ L S+
Sbjct: 666 KKFIASLGL--LEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMME---LSSSL 720
Query: 402 T------FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ L++ LC + A L + KG+ P+ + L+ G + N+ E
Sbjct: 721 NITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEAL 780
Query: 456 NLVNEMLDEG 465
L + DEG
Sbjct: 781 QLCYSICDEG 790
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 22/320 (6%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF------ 241
P+ S++N L++ + R++ A RM P V +NI I C ++
Sbjct: 175 PNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLL 234
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
LA ++ EM C N V+ R G KFD + M+ G + T +
Sbjct: 235 ALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKV 294
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ LC +V KA L + GV P + Y L++ C G A DE+ G
Sbjct: 295 ITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGC 354
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+V+ T L+ + ++ +AS + +M+ G P+++T++ L++ LC G A
Sbjct: 355 SANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACE 414
Query: 422 L--RLLAS--------------TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+ +L+ + T + P+ +TY L+ G + ++ + + L++ ML G
Sbjct: 415 VYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNG 474
Query: 466 FIPDLATYNSYMDGLSNARK 485
P+ Y++ +DG K
Sbjct: 475 CEPNHIIYDALIDGFCKVGK 494
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 43/275 (15%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
++A K R++ LA + + ++++ P+V Y +I+G + E KAL M
Sbjct: 521 IDAMFKDRRLD---LAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
P+VVT+ LI G ++ K DL+L LF +M KGC PN V++ LI DE
Sbjct: 578 KGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDE 637
Query: 279 GVNMAYEMIELGC-EFSSVTCEI--------------------------------LVDGL 305
++ EM + ++ C + L+D
Sbjct: 638 AHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697
Query: 306 CNEGRVLKACELVIDF----SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
GR+ +A EL + S + KD Y L++ LC A E+ E+ +KG
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDM-YTSLIQALCLASQLEKAFELYSEITRKGV 756
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+P + LI+GL ++ K EA L + EG+
Sbjct: 757 VPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT---FNILISGFCRNKKFDLA 244
P +Y +LI+ F K ++AL + M+ ++ + + LI C + + A
Sbjct: 685 PIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKA 744
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
L+ E+ KG P + F LI+G K++E + + Y + + G + S
Sbjct: 745 FELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVNWQS 795
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 19/201 (9%)
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
E+++ G P+ ++N L++ + D G + EM E G T LC EG
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI--------ALEVVDELWKKGN 361
R A ++ + + F L LC + +G+ A+ + +
Sbjct: 90 RWSDALVMI-----------EREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSC 138
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+P+V+ TL+ G + ++ ++ M+KEG P+ FN L+ C+ A +
Sbjct: 139 IPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYK 198
Query: 422 LRLLASTKGLDPDGMTYHILV 442
L + G P + Y+I +
Sbjct: 199 LLKRMADCGCPPGYVAYNIFI 219
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 75/200 (37%), Gaps = 38/200 (19%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E+ + G S T LV L G++ + + S G F + LC EG
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL +++ + L +V+ CT +I GL EA + +M +P+ VT
Sbjct: 90 RWSDALVMIER--EDFKLDTVL-CTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT-- 144
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
Y L++G+ ++ + + ++N M+ E
Sbjct: 145 ---------------------------------YRTLLTGFLKKKQLGWCKRIINMMMKE 171
Query: 465 GFIPDLATYNSYMDGLSNAR 484
G P+ + +NS + NAR
Sbjct: 172 GCNPNPSLFNSLVHSYCNAR 191
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 163/331 (49%), Gaps = 4/331 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F A+NAF K R+ D + F M L P+V YN +I+G K F++AL F DRM
Sbjct: 258 FTTAINAFCKGGRVGDAVDLFCKMEGL-GVFPNVVTYNNVIDGLFKSGRFEEALRFKDRM 316
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR +V P VVT+ +LISG + + F+ A + EM G PN V FN LI G+ +
Sbjct: 317 VRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDM 376
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG- 335
E + + EM G + + VT L+ G C ++ +A ++++ G L + D
Sbjct: 377 GEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG-LSVNMDVCSY 435
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK-E 394
++ +L AL++V +L S T L+ GL + EA L K+ +
Sbjct: 436 VIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVK 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ ++VT N LL LC+ G + + KGL D ++Y+ L+ G + + +E
Sbjct: 496 GLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM+ + F PD TYN M GL++ K
Sbjct: 556 FKLKEEMVQQEFQPDTYTYNFLMKGLADMGK 586
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N L++G + ++ +M+ + D +++N LI G C+ K + A L EM +
Sbjct: 505 NALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQ 564
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+ P+ ++N L++G K D+ + +E E G + T +L++G C R+
Sbjct: 565 QEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIED 624
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A + + V Y L+ C GN A ++ D + +G LP+ ++LI
Sbjct: 625 AVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIH 684
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G+ + + EA + E+M EG+LP+ + L+ C +G+ + L S+ G+ P
Sbjct: 685 GMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRP 744
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +TY I++ GY + KE L+NEM+ G PD TYN+ G R+
Sbjct: 745 NKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERE 796
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI G K + ++A + MV+ +PD T+N L+ G K D L E +
Sbjct: 539 YNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK 598
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGV----NMAYEMIELGCEFSSVTCEILVDGLCNE 308
E G PNV ++ L+ G+ + ++ V N+ YE +EL SSV IL+ C
Sbjct: 599 EYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVEL----SSVVYNILIAAYCRI 654
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G V +A +L RG+LP Y L+ +C G A E+ +E+ +G LP+V
Sbjct: 655 GNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCY 714
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T LI G +L + ++ +M GI P+ +T+ +++ C +G +A L
Sbjct: 715 TALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIR 774
Query: 429 KGLDPDGMTYHILVSGYTRE 448
G+ PD +TY+ L GY +E
Sbjct: 775 NGIAPDTVTYNALQKGYCKE 794
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 37/328 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + N+L++ VK E K+ +D + V PDV TF I+ FC+ + A+ L
Sbjct: 219 PCLKTCNLLLSSLVKANELHKSYEVFDLACQG-VAPDVFTFTTAINAFCKGGRVGDAVDL 277
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M G PNVV++N +I G F +F+E + M+ S VT +L+ GL
Sbjct: 278 FCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMK 337
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+A E++++ G P + + L++ C +G+ G AL V DE+ KG P+ +
Sbjct: 338 LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVT 397
Query: 368 CTTLIEGLRR-----------------------------LRKGVEASG------LMEKML 392
TL++G R + + +E SG ++ K+L
Sbjct: 398 FNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLL 457
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRL-LASTKGLDPDGMTYHILVSGYTRENRR 451
I L+ LC +A L LA+ KGL + +T + L+ G
Sbjct: 458 SGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNM 517
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG 479
+E ++ +ML++G + D +YN+ + G
Sbjct: 518 EEVFEVLKQMLEKGLLLDRISYNTLIFG 545
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 146/326 (44%), Gaps = 6/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFYD 214
F+ + F ++N+M A + + ++ SV+ + + +I+ ++ F AL
Sbjct: 398 FNTLLQGFCRSNQMEQ---AEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVT 454
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGL-FREMREKGCNPNVVSFNTLIRGFFGE 273
+++ ++ L+ G C+ + A+ L F+ KG N V+ N L+ G
Sbjct: 455 KLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCER 514
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+E + +M+E G ++ L+ G C G++ +A +L + ++ P + Y
Sbjct: 515 GNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTY 574
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L G ++ E + G +P+V L+EG + + +A + +
Sbjct: 575 NFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDY 634
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
E + SV +N L+ C +G +A +LR ++G+ P TY L+ G R E
Sbjct: 635 EKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDE 694
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDG 479
+ + EM +EG +P++ Y + + G
Sbjct: 695 AKEIFEEMRNEGLLPNVFCYTALIGG 720
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 7/226 (3%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS---VTCEI 300
A +F ++G P + + N L+ + + +YE+ +L C+ + T
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHK----SYEVFDLACQGVAPDVFTFTT 260
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++ C GRV A +L GV P Y +++ L G AL D + +
Sbjct: 261 AINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSK 320
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
PSV+ LI GL +L EA+ ++ +M G P+ V FN L++ C G +A
Sbjct: 321 VNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEAL 380
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
R+R + KG+ P+ +T++ L+ G+ R N+ ++ E ++ +L G
Sbjct: 381 RVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGL 426
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 15/251 (5%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAV- 161
F+ D T+ F+++ LA + ++H +L+ G + ++ +A+
Sbjct: 565 QEFQPDTYTYNFLMKGLADMGKIDDVHRLLH-------EAKEYGF-----VPNVYTYALL 612
Query: 162 -NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ KA+R+ D + F+ + SV +YN+LI + + +A D M
Sbjct: 613 LEGYCKADRIEDAVKFFKNLDYEKVELSSV-VYNILIAAYCRIGNVTEAFKLRDAMKSRG 671
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P T++ LI G C + D A +F EMR +G PNV + LI G + D
Sbjct: 672 ILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVG 731
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EM G + +T I++DG C G + +A EL+ + R G+ P Y L +
Sbjct: 732 SILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGY 791
Query: 341 CGEGNAGIALE 351
C E + L+
Sbjct: 792 CKERELTVTLQ 802
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
TC +L+ L + K+ E V D + +GV P F + + C G G A+++ ++
Sbjct: 223 TCNLLLSSLVKANELHKSYE-VFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKM 281
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
G P+V+ +I+GL + + EA ++M++ + P VT+ L+ L +
Sbjct: 282 EGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMF 341
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+A+ + + + G P+ + ++ L+ GY R+ E + +EM +G P+ T+N+
Sbjct: 342 EEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTL 401
Query: 477 MDGL--SNARKSVRQT 490
+ G SN + Q
Sbjct: 402 LQGFCRSNQMEQAEQV 417
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 162/358 (45%), Gaps = 39/358 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N + KA R++D L +M + + + Y VLIN +K F +A M
Sbjct: 302 FTNIINGYCKAERIDDALRVKTSMLS-SNCKLDLQAYGVLINVLIKKCRFKEAKETVSEM 360
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+VV + +I G+C+ K AL +FR M +GC PN ++++LI G ++K
Sbjct: 361 FANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKL 420
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + +M E G +T L+ G C + A L + G+ P + Y L
Sbjct: 421 HKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 480
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
LC G A E L +KG + + + T+L++G + A+ L+EKM+ EG
Sbjct: 481 THALCKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGC 537
Query: 397 LPDSVTFNCLLEDLCDVGR-----------TVDADRLRLLAST----------------- 428
DS T++ LL+ LC + T+ + ++A T
Sbjct: 538 KADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKS 597
Query: 429 -------KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G P TY + +S Y + + +E E+L+ EM +G PD+ TYN +++G
Sbjct: 598 MFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFING 655
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 9/329 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + K R++ E M R ++ PSV YN +I+G+ K ALG
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVV---PSVWTYNAMIDGYCKSGRMKDALGIKA 254
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ PD T+NILI G C +K D A L + +G P V++F +I G+
Sbjct: 255 LMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ + + M+ C+ +L++ L + R +A E V + G+ P Y
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ C G G ALEV + +G P+ ++LI GL + +K +A L+ KM ++
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI P +T+ L++ C +A RL + GL PD Y++L + R +E
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA 493
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ ++ +G + TY S +DG S A
Sbjct: 494 YSF---LVRKGVVLTKVTYTSLVDGFSKA 519
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 6/319 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++ + K ++ L F M +G RP+ Y+ LI G ++ ++ KA+
Sbjct: 371 IYTSIIDGYCKVGKVGAALEVFRLMEH--EGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 428
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M D + P V+T+ LI G C+ +FD A LF M + G P+ ++N L
Sbjct: 429 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E + ++ G + VT LVDG G A L+ G + Y
Sbjct: 489 RAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYS 545
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC + AL ++D++ G +++A T +I + + K A + +M+
Sbjct: 546 VLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 605
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P + T+ + C +G+ +A+ L G+ PD +TY++ ++G
Sbjct: 606 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRA 665
Query: 455 ENLVNEMLDEGFIPDLATY 473
+ + M+D P+ TY
Sbjct: 666 FSTLKRMIDASCEPNYWTY 684
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 163/391 (41%), Gaps = 24/391 (6%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSND----GIFSCP 151
F W + FRH A+S+ ++L ++ P + D + SC
Sbjct: 75 FEWVARRPGFRHT-----------AASHA-----ALLQLLARRRAPANYDKLVVSMVSCS 118
Query: 152 EMERIFHFAVNAFVKANRMNDGL---LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
+ AV+A R+ L M L+ R + Y +LI G + R +
Sbjct: 119 DTAEDMREAVDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVRE 178
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL MV+D ++ T+ +LI G C+ + A + EM +G P+V ++N +I
Sbjct: 179 ALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMID 238
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G+ + + + + M GC T IL+ GLC E + +A EL+ D RG P
Sbjct: 239 GYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTP 297
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
+ ++ C AL V + + A LI L + + EA +
Sbjct: 298 TVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETV 357
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+M G+ P+ V + +++ C VG+ A + L +G P+ TY L+ G ++
Sbjct: 358 SEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQD 417
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ + L+ +M ++G P + TY + + G
Sbjct: 418 QKLHKAMALITKMQEDGITPGVITYTTLIQG 448
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 20/345 (5%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E+ ++ +A K+ R + +F + ++ + + Y L++GF K D A
Sbjct: 474 EQAYNVLTHALCKSGRAEEAY-SFLVRKGVVLTKVT---YTSLVDGFSKAGNTDFAAVLI 529
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++MV + K D T+++L+ C+ KK + AL + +M G N+V++ +I E
Sbjct: 530 EKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKE 589
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K D +M EMI G + S+ T + + C G++ +A L+ + R GV P Y
Sbjct: 590 GKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTY 649
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR----KGVEASG--- 386
+ G A + + P+ L++ ++ V+ SG
Sbjct: 650 NVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWN 709
Query: 387 ---------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
L+E+M+K G+ P +VT++ ++ C R +A L K + P+
Sbjct: 710 WIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEI 769
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
Y +L+ + + V +M++ GF P L +Y+ + GL +
Sbjct: 770 YTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCD 814
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 1/242 (0%)
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
A L M GC N S+ LI+G R E + + M++ GC + T +L+
Sbjct: 144 ACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIK 203
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC EGR+ A ++ + RGV+P + Y +++ C G AL + + + G P
Sbjct: 204 GLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNP 263
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
LI GL K EA L+ + G P +TF ++ C R DA R++
Sbjct: 264 DDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVK 322
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ D Y +L++ ++ R KE + V+EM G P++ Y S +DG
Sbjct: 323 TSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKV 382
Query: 484 RK 485
K
Sbjct: 383 GK 384
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 135/331 (40%), Gaps = 22/331 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ K + ++ FE M + +G P YNVL + K ++A F +VR
Sbjct: 446 IQGQCKKHEFDNAFRLFEMMEQ--NGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRK 500
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V VT+ L+ GF + D A L +M +GC + +++ L++ ++K +E
Sbjct: 501 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEA 560
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+++ +M G + + V I++ + EG+ A + + G P Y +
Sbjct: 561 LSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C G A ++ E+ + G P V+ I G + A +++M+ P+
Sbjct: 621 YCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPN 680
Query: 400 SVTFNCLLE-------------DLCDVGRTVDADRLRLLAS---TKGLDPDGMTYHILVS 443
T+ LL+ D + ++ D + L GL+P +TY +++
Sbjct: 681 YWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIA 740
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
G+ + R +E L + M + P+ Y
Sbjct: 741 GFCKATRLEEACVLFDHMRGKDISPNEEIYT 771
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCR----------------EFDKALGFYDRMV 217
AF ++++ID P+ Y +L+ F+K E D +RMV
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMV 724
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ + P VT++ +I+GFC+ + + A LF MR K +PN + LI+ + F
Sbjct: 725 KHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFG 784
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
+ V+ +MIE G + + L+ GLC+EG KA L D
Sbjct: 785 KAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL 828
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+ +I GF K ++A +D M + P+ + +LI C K F A+
Sbjct: 730 PTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 789
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE---FSSVTCEILVDG 304
+M E G P++ S++ LI G E +D+ ++ ++ LG E + V +IL DG
Sbjct: 790 VTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL--LGMEDYNHNEVAWKILNDG 847
Query: 305 LCNEGRV 311
L G V
Sbjct: 848 LLKAGHV 854
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 156/314 (49%), Gaps = 10/314 (3%)
Query: 170 MND-GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ND G+ ++ +R L +P+V + LI + K R D Y++M+ V PDVVT
Sbjct: 218 LNDCGVETWDGLRDL---QPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTC 274
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ ++ G CR+ K A L REM G +PN VS+ T+I + E N +M+
Sbjct: 275 SSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVV 334
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G V C ++DGL G+ +A E+ + ++P Y L++ C G+
Sbjct: 335 RGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEF 394
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRR---LRKGVEASGLMEKMLKEGILPDSVTFNC 405
A V+ ++ K+ LP+V+ +++I G + L K VE ++ KM++ I+P+ +
Sbjct: 395 AETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVE---VLRKMVQMNIMPNVFVYAI 451
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LL+ G+ A + GL+ + + + IL++ R KE ++L+ ++L +G
Sbjct: 452 LLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKG 511
Query: 466 FIPDLATYNSYMDG 479
D+ Y+S MDG
Sbjct: 512 IYLDVFNYSSLMDG 525
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 186/386 (48%), Gaps = 26/386 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSEL-----HSVLNFISANPCPCSN--DGIFSCPEMERIFHFA 160
+H ++ I+ +L S R E V+ IS + C+ DG+F
Sbjct: 305 NHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLF------------ 352
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
KA + + F+ + KL + P+ Y L++G K + + A +M ++
Sbjct: 353 -----KAGKSKEAEEMFQTILKL-NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEH 406
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+VVTF+ +I+G+ + + A+ + R+M + PNV + L+ G+F + +
Sbjct: 407 VLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAA 466
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
EM G E +++ +IL++ L G + +A L+ D +G+ F+Y L++
Sbjct: 467 GFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGY 526
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EGN AL VV E+ +K V+A L +GL RL K E + +M++ G+ PD
Sbjct: 527 FKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDC 585
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N ++ G+T +A L + G+ P+ +TY+IL+ G + ++ ++++E
Sbjct: 586 VTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHE 645
Query: 461 MLDEGFIPDLATYNSYMDGLSNARKS 486
ML G++P + + S +RK+
Sbjct: 646 MLAVGYVPTPIIHKFLLKAYSRSRKA 671
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 30/322 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V N+L++ K + ALG+ V D V T+N ++ GFC+ D GL
Sbjct: 43 PNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHV-----TYNTVVWGFCKRGLADQGFGL 97
Query: 248 FREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
EM +KG + V+ N L++G+ G ++ E + ++ G ++ LVDG
Sbjct: 98 LSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWI--MGNLVGGGVPLDAIGLNTLVDGY 155
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL--------- 356
C G V +A +LV D + GV P Y LV C G+ A VV+E+
Sbjct: 156 CEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDES 215
Query: 357 ----------WK--KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
W + P+V+ TTLI + R + L E+M+ G++PD VT +
Sbjct: 216 GVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCS 275
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
+L LC G+ +A L GLDP+ ++Y ++S + R E N ++M+
Sbjct: 276 SILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVR 335
Query: 465 GFIPDLATYNSYMDGLSNARKS 486
G DL + MDGL A KS
Sbjct: 336 GISIDLVLCTTMMDGLFKAGKS 357
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 164/361 (45%), Gaps = 39/361 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
F +N + K +N A E +RK++ P+V +Y +L++G+ + + + A GFY
Sbjct: 414 FSSIINGYAKKGMLNK---AVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYK 470
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++ + + F+IL++ R+ A L +++ KG +V ++++L+ G+F E
Sbjct: 471 EMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEG 530
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN--------------------------- 307
+++ EM E +F V L GL
Sbjct: 531 NESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNS 590
Query: 308 -------EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+G+ A +L+ + GV+P Y L+ LC G + V+ E+ G
Sbjct: 591 VMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+P+ I L++ R RK + +K++ G+ + + +N L+ LC +G T A+
Sbjct: 651 YVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKAN 710
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ KG+ D +TY+ L+ GY + ++ N ++ML G P++ TYN+ ++GL
Sbjct: 711 VVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGL 770
Query: 481 S 481
S
Sbjct: 771 S 771
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 137/292 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN ++N + + + AL + M V P++VT+NILI G C+ + + +
Sbjct: 583 PDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISV 642
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM G P + L++ + RK D + + +++++G + + L+ LC
Sbjct: 643 LHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCR 702
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G KA ++ + +G+ Y L+ C + A ++ G P++
Sbjct: 703 LGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITT 762
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+EGL +A L+ +M + G++P++ T+N L+ VG D+ +L
Sbjct: 763 YNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMI 822
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
TKG P TY++L+ Y + + ++ L+NEML G IP+ +TY+ + G
Sbjct: 823 TKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICG 874
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 2/307 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D + V YN L G ++ +++ + RM+ + PD VT+N +++ + K + A
Sbjct: 546 DMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENA 604
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L L EM+ G PN+V++N LI G ++ +++ +EM+ +G + + + L+
Sbjct: 605 LDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA 664
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+ ++ G+ Y L+ LC G A V+ E+ KG
Sbjct: 665 YSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISAD 724
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ LI G +A +ML GI P+ T+N LLE L G DAD+L
Sbjct: 725 IVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVS 784
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+GL P+ TY+ILVSG+ R +++ L EM+ +GFIP TYN + + A
Sbjct: 785 EMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAG 844
Query: 485 KSVRQTR 491
K +RQ R
Sbjct: 845 K-MRQAR 850
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 23/285 (8%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ I+ L+ + + R+ D L + ++V + + + +N LI+ CR A +
Sbjct: 653 PTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVV 712
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM KG + ++V++N LIRG+ ++ N +M+ G + T L++GL
Sbjct: 713 LTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLST 772
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A +LV + RG++P Y LV GN ++++ E+ KG +P+
Sbjct: 773 NGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGT 832
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ + K +A L+ +ML G +P+S T++ L+ C + + DRL L+
Sbjct: 833 YNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLS- 891
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ E + L+ EM ++G +P +T
Sbjct: 892 ----------------------YQNEAKKLLREMCEKGHVPSEST 914
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++++ ++ F++ + + FE M+ P YN LI+ K + ++ YD
Sbjct: 791 KVYNLLIDGFLEVHNVEVAWNLFEEMKS-AGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ KP+ +T+N++IS ++ + D A+ L+ + +P +F LI G
Sbjct: 850 EMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSG 909
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ GC +S ILV+G G V ACE + G+ P Y
Sbjct: 910 RLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYT 969
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LV+ LC G AL ++L + G P ++A +I GL R ++ EA L +M
Sbjct: 970 ILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR 1029
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI+PD T+N L+ +L VG +A ++ GL P+ TY+ L+ GYT +
Sbjct: 1030 GIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELA 1089
Query: 455 ENLVNEMLDEGFIPDLATY 473
+ +M+ G P+ T+
Sbjct: 1090 YGIYKKMMVGGCDPNTGTF 1108
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 11/376 (2%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
R + T+ +R L + E + ++ + + C P++ + ++A
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCG---------PDV-VTYTVLIDAL 309
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
A +++D + F M+ +P Y L++ F C DK + M D PD
Sbjct: 310 CTARKLDDAMCLFTKMKS-SSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD 368
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
VVTF IL++ C+ + + A L MR++G PN+ ++NTLI G + D+ +++
Sbjct: 369 VVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFS 428
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M LG E ++ T +L+D G KA E RG+ P + L G
Sbjct: 429 NMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMG 488
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
G A + +EL G P + +++ ++ + EA L+ +M K PD + N
Sbjct: 489 RLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVIN 548
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ L GR +A ++ L P +TY+IL++G +E + ++ L M
Sbjct: 549 SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGH 608
Query: 465 GFIPDLATYNSYMDGL 480
G P+ T+N+ +D L
Sbjct: 609 GCSPNTITFNTLLDCL 624
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 139/297 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP++ Y + I + + D+A RM D PDVVT+ +LI C +K D A+
Sbjct: 261 RPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC 320
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF +M+ P+ V++ TL+ F D+ + EM G VT ILV+ LC
Sbjct: 321 LFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC 380
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR+ +A +L+ ++GVLP Y L+ L AL++ + G P+
Sbjct: 381 KAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAY 440
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+ + +A EKM GI P+ V N L L ++GR +A +
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ GL PD +TY++++ Y++ + E L++EM PD+ NS +D L A
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI+ ++ +AL Y RMV + +KP + TF+ L+ + + +GL EM
Sbjct: 197 YNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PN+ ++ IR + K DE + M + GC VT +L+D LC ++
Sbjct: 257 SMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLD 316
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L P Y L++K G+ ++ E+ G P V+ T L+
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILV 376
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + + EA L++ M K+G+LP+ T+N L+ L R DA L + G++
Sbjct: 377 NALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVE 436
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
P TY +L+ + + + +M G P++ N+ + L+
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLA 485
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 141/305 (46%), Gaps = 1/305 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F VNA KA R+N+ + MRK P++ YN LI+G ++ D AL + M
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTMRKQ-GVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+P T+ +LI ++ AL F +M+ +G PN+V+ N + +
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E M E+ G SVT +++ G+V +A +L+ + S+ P L
Sbjct: 491 GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L G A ++ + + P+V+ L+ GL + + +A L E M G
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+++TFN LL+ LC A ++ +T PD +T++ ++ G+ ++N+ K
Sbjct: 611 SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670
Query: 457 LVNEM 461
L ++M
Sbjct: 671 LFHQM 675
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 47/355 (13%)
Query: 103 DSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVN 162
D + D TF +V +L + R +E +L+ + G+ P + ++ ++
Sbjct: 363 DGYAPDVVTFTILVNALCKAGRINEAFDLLDTMR-------KQGVL--PNL-HTYNTLIS 412
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
++ANR++D L F M L P+ Y +LI+ K KAL +++M +
Sbjct: 413 GLLRANRLDDALDLFSNMESL-GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIA 471
Query: 223 P-----------------------------------DVVTFNILISGFCRNKKFDLALGL 247
P D VT+N+++ + + + D A+ L
Sbjct: 472 PNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKL 531
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + C P+V+ N+LI + + +E M M E+ + VT IL+ GL
Sbjct: 532 LSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGK 591
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ KA +L + G P + L++ LC +AL++ ++ P V+
Sbjct: 592 EGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLT 651
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
T+I G + + A L +M K+ + PD VT LL + G+ DA R+
Sbjct: 652 FNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRI 705
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M R ++ +V T+ I+ A +MRE G N S+N LI
Sbjct: 147 FDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQ 206
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E + + M+ G + S T L+ + L+ + G+ P +
Sbjct: 207 SGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYT 266
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y + L +G A ++ + G P V+ T LI+ L RK +A L KM
Sbjct: 267 YTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK 326
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
PD VT+ LL+ D G +++ G PD +T+ ILV+ + R
Sbjct: 327 SSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRIN 386
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +L++ M +G +P+L TYN+ + GL A +
Sbjct: 387 EAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 158/406 (38%), Gaps = 51/406 (12%)
Query: 130 SVLNFISANPCPCSNDGI------------FSCPEMERIFHFAVNAFVKANRMNDGLLAF 177
+ + F + C C ND + +C F+ ++ F+K N++ + + F
Sbjct: 613 NTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKC----------------------REF--------- 206
M+KL+ RP L+ G +K R F
Sbjct: 673 HQMKKLL--RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGIL 730
Query: 207 -----DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNV 260
+KA+ F +R+V + D +I C++KK +A +F + +E G P +
Sbjct: 731 TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
+N LI GF + N+ EM GC + T L+D G++ + +L +
Sbjct: 791 KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850
Query: 321 FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
RG P Y ++ L A+++ L P+ LI+GL + +
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
+A + + M+ G P+S +N L+ +G A +G+ PD +Y I
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
LV R + + ++ G PDL YN ++GL ++++
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N ++ R + L F M R ++ P + YN LI ++A Y+
Sbjct: 1003 YNLMINGLGRSQRTEEALSLFHEMQNRGIV---PDLYTYNSLILNLGIVGMIEEAGKIYE 1059
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
+ +KP+V T+N LI G+ + +LA G++++M GC+PN +F L
Sbjct: 1060 ELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 158/362 (43%), Gaps = 37/362 (10%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+I+ + F K N + L FE MR RP V Y LI G K D+A F+
Sbjct: 1256 KIYTMLIALFFKFNDAHGALSLFEEMRHQY-CRPDVFTYTELIRGLGKAGRIDEAYHFFC 1314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M R+ +PD V N +I+ + + D A+ LF+EM C P+VV++NT+I+ F +
Sbjct: 1315 EMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESK 1374
Query: 275 KFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
V +E M E G SS T IL+DG C R+ KA L+ + +G P Y
Sbjct: 1375 SRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 1434
Query: 334 FGLVEKL-------------------CGEGNAGI----------------ALEVVDELWK 358
L++ L CG +A + A+ + DE+ K
Sbjct: 1435 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNK 1494
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
G P V A L+ GL R EA M +M + G +PD ++N +L L G
Sbjct: 1495 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 1554
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + + PD ++Y+ ++ + +E L+ EM GF DL TY+S ++
Sbjct: 1555 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILE 1614
Query: 479 GL 480
+
Sbjct: 1615 AI 1616
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 6/325 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF K R + + M++ I +P+ IY +LI F K + AL ++ M
Sbjct: 1227 ISAFCKLGRRDSAIQLLNEMKE-IGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PDV T+ LI G + + D A F EM+ +GC P+ V N +I + D+ +
Sbjct: 1286 CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAM 1345
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR---RGVLPKDFDYFGLV 337
+ EM L C S VT ++ L +A E+ F R G+ P F Y L+
Sbjct: 1346 KLFQEMETLRCIPSVVTYNTIIKALFESKS--RASEVPSWFERMKESGISPSSFTYSILI 1403
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C A+ +++E+ +KG P A +LI+ L + ++ A L +++ +
Sbjct: 1404 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 1463
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
+ + +++ L GR DA + + G PD Y+ L+SG R E +
Sbjct: 1464 SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 1523
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSN 482
+ M + G IPD+ +YN ++GL+
Sbjct: 1524 MRRMQEHGCIPDINSYNIILNGLAK 1548
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 185/486 (38%), Gaps = 56/486 (11%)
Query: 42 VTLTPTAHHT------HLLRFLKTHLLTPTNNQITPSSLL---HFLKSKLHHHPQFTHYD 92
T+ P H+ +R LK P + +L H+L ++ +
Sbjct: 1037 ATIAPRYTHSVRVLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVK 1096
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F WA+ ++ HD +T++ ++ L ++ E+ ++ + NP C + + E
Sbjct: 1097 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI-C----VVTPTE 1151
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ + NA K R + RK +P YN +I + +++K
Sbjct: 1152 LSDVVRMLGNA--KMVRQAITIFYQIKTRKC---QPIAQAYNSMIIMLMHEGQYEKVHQL 1206
Query: 213 YDRM-VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
Y+ M PD VT++ LIS FC+ + D A+ L EM+E G P + LI FF
Sbjct: 1207 YNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFF 1266
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+++ EM C T L+ GL GR+ +A + R G P
Sbjct: 1267 KFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTV 1326
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR-KGVEASGLMEK 390
++ L G A+++ E+ +PSV+ T+I+ L + + E E+
Sbjct: 1327 FMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFER 1386
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP----------------- 433
M + GI P S T++ L++ C R A L KG P
Sbjct: 1387 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 1446
Query: 434 ------------------DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
Y +++ + R + N+ +EM G PD+ YN+
Sbjct: 1447 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 1506
Query: 476 YMDGLS 481
M GL+
Sbjct: 1507 LMSGLA 1512
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 12/334 (3%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
R D T+ ++R L + R E + F C D +F + +N
Sbjct: 1287 RPDVFTYTELIRGLGKAGRIDEAYHF--FCEMQREGCRPDTVF--------MNNMINFLG 1336
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL-GFYDRMVRDRVKPD 224
KA R++D + F+ M L PSV YN +I + + + +++RM + P
Sbjct: 1337 KAGRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 1395
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
T++ILI GFC+ + + A+ L EM EKG P ++ +LI +++D +
Sbjct: 1396 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 1455
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E+ E S+ +++ L GR+ A + + ++ G P + Y L+ L G
Sbjct: 1456 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 1515
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + + + G +P + + ++ GL + A ++ M + + PD V++N
Sbjct: 1516 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYN 1575
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+L L G +A +L +T G + D +TY
Sbjct: 1576 TVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 1609
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 157/376 (41%), Gaps = 47/376 (12%)
Query: 153 MERIFHFAVNAFVKAN-RMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
M R+ H+ V +K + +N + F K + S Y LI+ C E + G
Sbjct: 1075 MLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIH----CLEVVEQYG 1130
Query: 212 FYDRMVRDRVK-PDVVTFNILISGFCR----NKKFDLALGLFREMREKGCNPNVVSFNTL 266
+M+++ V+ P V +S R K A+ +F +++ + C P ++N++
Sbjct: 1131 EMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSM 1190
Query: 267 IRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
I E ++++ + EM G C +VT L+ C GR A +L+ + G
Sbjct: 1191 IIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIG 1250
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P Y L+ +A AL + +E+ + P V T LI GL + + EA
Sbjct: 1251 MQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAY 1310
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-------DRLRLLAST---------- 428
+M +EG PD+V N ++ L GR DA + LR + S
Sbjct: 1311 HFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKAL 1370
Query: 429 -------------------KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G+ P TY IL+ G+ + NR ++ L+ EM ++GF P
Sbjct: 1371 FESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPC 1430
Query: 470 LATYNSYMDGLSNARK 485
A Y S +D L A++
Sbjct: 1431 PAAYCSLIDALGKAKR 1446
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV-SIYNVLINGFVKCREFDKALGFYDR 215
+ ++ F K NRM ++ E M + G P + Y LI+ K + +D A +
Sbjct: 1399 YSILIDGFCKTNRMEKAMMLLEEMDE--KGFPPCPAAYCSLIDALGKAKRYDLACELFQE 1456
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + + ++I + + D A+ +F EM + GC P+V ++N L+ G
Sbjct: 1457 LKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGM 1516
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE ++ M E GC + I+++GL G +A E++ + + V P Y
Sbjct: 1517 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 1576
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
++ L G A +++ E+ G +I ++++E + ++
Sbjct: 1577 VLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 1619
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 153/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L+ K +++ + + + + D+ +F LI FCR + LAL
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+F +L+ GF +F E +++ +++ LG E + V ++D LC
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G+V A +++ + G+ P Y L+ +L G G++ ++ ++ + G P VI
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ LI+ + + +EA +M++ + P+ VT+N L+ LC G +A ++ +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG P+ +TY+ L++GY + R +G ++ M +G D TYN+ G A K
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 158/329 (48%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ F + R++ L M KL PS+ + L+NGF F +A+ D++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKL-GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +P+VV +N +I C + + AL + + M++ G P+VV++N+LI F +
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ +M+ +G +T L+D EG++L+A + + +R V P Y L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +V++ L KG P+ + TLI G + ++ + ++ M ++G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D+ T+N L + C G+ A+++ + G+ PD T++IL+ G + +
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++ + + TYN + GL A K
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 146/314 (46%), Gaps = 2/314 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ +++ + ++N L + M+K+ RP V YN LI + +
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKM-GIRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R + PDV+TF+ LI + + + A + EM ++ NPN+V++N+LI G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + ++ G ++VT L++G C RV +++ SR GV F Y
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L + C G A +V+ + G P + L++GL K +A +E + K
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ +T+N +++ LC + DA L + KG+ PD +TY ++ G R+ +E
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484
Query: 456 NLVNEMLDE-GFIP 468
L +M E G +P
Sbjct: 485 ELYRKMQKEDGLMP 498
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 4/296 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V +YN +IN K + A Y M+ + PDVVT+ LI GFC A
Sbjct: 194 KPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFS 253
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM+ K NPNV +FN LI E K E + M++ + T L+DG
Sbjct: 254 LLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYF 313
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V A + ++RGV P Y ++ LC A+ + +E+ K +P ++
Sbjct: 314 LVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIV 373
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RL 424
+LI+GL + A L ++M ++GI PD ++ LL+ LC GR DA + RL
Sbjct: 374 TYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL 433
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
LA KG + Y +L++ + E +L ++M D+G +PD T++ + L
Sbjct: 434 LA--KGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRAL 487
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N +++ V + + + + + + + PD+ T +ILI+ FC LA +F +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G +PN ++ NTLI+G + + + +++ G + V+ L++GLC G
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
L+ V P Y ++ LC G A +V E+ KG P V+ TTLI
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + EA L+ +M + I P+ TFN L++ L G+ +A L + +
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
PD TY+ L+ GY + K + + M G PD+ Y + ++GL +
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 131/296 (44%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ N LI G E KAL F+D++V + D V++ LI+G C+ + L
Sbjct: 125 PNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARL 184
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R++ P+VV +NT+I + + ++ EMI G VT L+ G C
Sbjct: 185 LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCI 244
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A L+ + + + P + L++ L EG A ++ + K P V
Sbjct: 245 MGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFT 304
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+LI+G + + A + M + G+ PD + ++ LC +A L
Sbjct: 305 YNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMK 364
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K + PD +TY+ L+ G + + + L M ++G PD+ +Y +DGL +
Sbjct: 365 HKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKS 420
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++A K +M + + M K +P V YN LI+G+ E A + M
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACI-KPDVFTYNSLIDGYFLVDEVKHAKYVFYSM 328
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PDV + +I+G C+ K D A+ LF EM+ K P++V++N+LI G
Sbjct: 329 AQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHL 388
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + M E G + + IL+DGLC GR+ A E+ +G Y L
Sbjct: 389 ERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVL 448
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +LC G AL++ ++ KG +P + +I L + +A ++ +M+ G+
Sbjct: 449 INRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Query: 397 LPD 399
L +
Sbjct: 509 LKE 511
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 35/277 (12%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A+ ++ M+ R P FN ++S NK + + LF++ G P++ + + LI
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
F C++ + A + + +RG P
Sbjct: 101 CF-----------------------------------CHQAHITLAFSVFANILKRGFHP 125
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
L++ LC G AL D+L +G ++ TLI GL + + + L+
Sbjct: 126 NAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLL 185
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
K+ + PD V +N ++ LC DA + KG+ PD +TY L+ G+
Sbjct: 186 RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIM 245
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE +L+NEM + P++ T+N +D LS K
Sbjct: 246 GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 163/364 (44%), Gaps = 36/364 (9%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + +++ K M+D L F+ MR+ R +V YN LING+ + F +A G
Sbjct: 370 EVTYAILIHSLCKRGMMDDALCMFDRMREK-GIRVTVYPYNSLINGYCQHDNFHQARGLL 428
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ MV + P +++ LI+G CR A+ L REM G + NV +F TLI GF +
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKD 488
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
DE + +MI+ + VT ++++G C G V KA +L RG+ P ++ Y
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548
Query: 334 FGLVEKLCGEGNAGIALEVVDEL-------------------WKKGNLPS---------- 364
L+ LC A A E VD+L K+G L
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608
Query: 365 ------VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+I+ T ++ +L G + S L +M ++G+ PD+V C+++ V
Sbjct: 609 RGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQ 668
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A G P+ +TY +L++ + + L EML F+P+ TYN ++D
Sbjct: 669 ALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLD 728
Query: 479 GLSN 482
L+N
Sbjct: 729 FLAN 732
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 3/299 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YNVL+ G + +A+ + MV + D VT+ L+ GFCR ++ ++AL + +M
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
P+V S + ++ G D+ +A + ELG + C L+D LC + R
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFR 352
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L + RG+ P + Y L+ LC G AL + D + +KG +V +LI
Sbjct: 353 EAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLI 412
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + +A GL+ +M+++G+ P + +++ L+ LC G A L + G+
Sbjct: 413 NGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVS 472
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG---LSNARKSVR 488
+ T+ L+SG+ ++ E L ++M+D +P+ T+N ++G + N RK+ +
Sbjct: 473 GNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ 531
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ N LI+ K R F +A + M ++P+ VT+ ILI C+ D AL +
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F MREKG V +N+LI G+ F + + EM+E G S+ + L+ GLC
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + A EL + +R GV + + L+ C +GN A + D++ +P+ +
Sbjct: 453 KGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVT 512
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG R+ +A L ++M+ G+ PD+ T+ L+ LC + A
Sbjct: 513 FNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLE 572
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ + + L+ G+ +E R E ++ +EM G DL ++
Sbjct: 573 NNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISF 618
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 8/286 (2%)
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+K R+F A +D MV+ + D + I +C + D A GL M KG
Sbjct: 169 ALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKG 228
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ V +N L+ G + E V + M+E G VT LV G C + A E+
Sbjct: 229 SAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMT 288
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
D +P +V+ L G+ A + L + G +P++ AC LI+ L +
Sbjct: 289 DDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKD 348
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGLDPD 434
R+ EA L M G+ P+ VT+ L+ LC G DA DR+R KG+
Sbjct: 349 RRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMR----EKGIRVT 404
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
Y+ L++GY + + + L+NEM+++G P A+Y+ + GL
Sbjct: 405 VYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGL 450
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 154/351 (43%), Gaps = 42/351 (11%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIYN--VLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
R D A E R++ S ++Y LI+GF K D+A +D+M+ V P+ V
Sbjct: 452 RKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEV 511
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNP---------------------------- 258
TFN++I G+CR A L+ +M ++G P
Sbjct: 512 TFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDL 571
Query: 259 -------NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
N S TL+ GF E + E ++ EM G + ++ ++V
Sbjct: 572 ENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDG 631
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
K L + +GV P + + +++ E N AL D++ G P+V+ T L
Sbjct: 632 EKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVL 691
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST--K 429
I L + A L E+ML LP+S T+NC L+ L + G + ++ ++L +T +
Sbjct: 692 INHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEG---ELEKAKVLHATILE 748
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + +T++ L+ G+ + + + +L+ + GF PD +Y++ ++ L
Sbjct: 749 GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINEL 799
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L+ GF K + +D M VK D+++F +++ + + LFREM+EKG
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKG 645
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+ V +I E + +N +MI GC + VT +L++ LC G + A
Sbjct: 646 VKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQ 705
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L + LP F Y ++ L EG A +V+ +G L + + TLI+G
Sbjct: 706 ILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGF 764
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ + A LM+ + G PD ++++ ++ +LC VG A +L KGL PD
Sbjct: 765 CKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDI 824
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+ Y+IL+ +G + ++M++ + D
Sbjct: 825 VAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADD 858
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + +I+ K +AL +D+M+ D P+VVT+ +LI+ C++ A
Sbjct: 647 KPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQI 706
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM PN ++N + E + ++ + ++E GC ++VT L+ G C
Sbjct: 707 LCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFC 765
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G++ A +L+ + + G P Y ++ +LC G+ A ++ +E+ KG P ++
Sbjct: 766 KAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIV 825
Query: 367 ACTTLI 372
A LI
Sbjct: 826 AYNILI 831
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N LI GF K + A+ PD ++++ +I+ C+ + A L+ EM
Sbjct: 757 FNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEML 816
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
KG P++V++N LIR +FD+G+ + +M+ L
Sbjct: 817 YKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNL 853
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + F KA ++ A + M+ + P Y+ +IN K + +KA ++
Sbjct: 757 FNTLIKGFCKAGQIQG---AIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWN 813
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
M+ +KPD+V +NILI + +FD LG++ +M
Sbjct: 814 EMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 147/323 (45%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + KA + + L +R+ P+V YN LI+G+ + ++A + M
Sbjct: 387 YNSMLNGYCKAGNLKEALWLLGDLRR-AGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEM 445
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PDV T+ IL++G + + +A F EM KG P+ ++NT I
Sbjct: 446 VEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDT 505
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M+ G +VT +++DGLC G + A +L + G+ P Y L
Sbjct: 506 HKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCL 565
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A ++++ + G PSV+ T LI R A G KML GI
Sbjct: 566 IHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGI 625
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ +T+N L+ LC GRT+ A +GL P+ TY +L+ G RE +
Sbjct: 626 EPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIR 685
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L EM G PD T+N+ G
Sbjct: 686 LYFEMHQNGIPPDYCTHNALFKG 708
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 6/303 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN +I+G +K + + A + M + PD++T+N +++G+C+ AL L
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++R G P V+++NTLI G+ +E + EM+E GC T IL++G
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE---GNAGIALEVVDELWKKGNLPS 364
+ A E + +G+ P D F ++C E G+ A ++ + + KG P
Sbjct: 467 VRNLPMAREFFDEMLSKGLQP---DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPD 523
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +I+GL + +A L KM+ +G+ PD +T+ CL+ C+ G +A +L
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLN 583
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ GL P +TY IL+ R +MLD G P+ TYN + L
Sbjct: 584 GMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTG 643
Query: 485 KSV 487
+++
Sbjct: 644 RTL 646
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 8/336 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDR 215
++ +++F+K R ++ + + M G + YNV+I+ + + A D
Sbjct: 246 YNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDS 305
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R K T+N LI+ L EM +G P +V++N +I G +
Sbjct: 306 M-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQ 364
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ EM +G +T +++G C G + +A L+ D R G+ P Y
Sbjct: 365 VEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNT 424
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G A + +E+ ++G P V T L+ G ++R A ++ML +G
Sbjct: 425 LIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKG 484
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ PD +N + +G T A +LR + KG+ PD +TY++++ G + K+ +
Sbjct: 485 LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAK 544
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG------LSNARK 485
+L +M+ +G PD TY + LS ARK
Sbjct: 545 DLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARK 580
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 9/269 (3%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V PDV N ++ ++D ++REM + P +V++NTL+ F E + DE
Sbjct: 204 VAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEAS 263
Query: 281 NMAYEMIEL--GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM GC + VT +++ L EG + A +LV D R F Y L+
Sbjct: 264 MLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLV-DSMRLSKKASSFTYNPLIT 322
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL-MEKMLKEGIL 397
L G + E+ +G +P+++ +I GL + + VEA+ L +M G+L
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQ-VEAAQLKFAEMRAMGLL 381
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEGE 455
PD +T+N +L C G +A L LL + GL P +TY+ L+ GY R +E
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEA--LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM+++G PD+ TY M+G R
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVR 468
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 3/290 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V N ++ +D Y M++ ++P +VT+N L+ F + + D A L
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265
Query: 248 FREMREK--GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+EM + GC N V++N +I F E + + L + SS T L+ L
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVI-SFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITAL 324
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G V K L ++ G++P Y ++ L A E+ G LP +
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +++ G + EA L+ + + G+ P +T+N L++ C +G +A RL+
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
+G PD TY IL++G + +EML +G PD YN+
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT 494
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+ RK++D P+ YNVLI+ + A + M+ + P+ T+ +LI
Sbjct: 613 AYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLID 672
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
G CR + A+ L+ EM + G P+ + N L +GF
Sbjct: 673 GNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 159/317 (50%), Gaps = 1/317 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ VN VK+NR+++ ++M+ + P + Y L++G K ++A + +
Sbjct: 705 VYNIMVNGLVKSNRVDEACKLVDSMKNQ-NILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + +PDVV + L+ + K AL +FR M +K C P+VV++++LI E +
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E I GC + L+D +G V +A EL + RR P Y
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L G +A ++++E+ K G +P ++ LI+G+ ++ EA ++M ++G
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I+PD +TF L+E L V + ++A L +G +P +TY++L+ R + E
Sbjct: 944 IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003
Query: 456 NLVNEMLDEGFIPDLAT 472
+ +EM +G +PD T
Sbjct: 1004 MIFHEMKVKGCMPDGIT 1020
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 163/327 (49%), Gaps = 5/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+++ VK +++ L F +++ L+ P +YN+++NG VK D+A D M
Sbjct: 675 LSSLVKDEKIDFALQIFNELQESSLV---PDTFVYNIMVNGLVKSNRVDEACKLVDSMKN 731
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ PD+ T+ L+ G ++ + + A +F +M E+G P+VV++ +L+ K
Sbjct: 732 QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSH 791
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + M + C VT L+D L EGRV +A + +G P Y L++
Sbjct: 792 ALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLID 851
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+G ALE+ +E+ ++ P+++ L+ GL + + A L+E+M K G +P
Sbjct: 852 SFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVP 911
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT+N L++ + +G +A+ KG+ PD +T+ L+ + ++ E L
Sbjct: 912 DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M +EG+ P + TYN +D L A K
Sbjct: 972 DSMEEEGYNPSVVTYNVLIDILGRAGK 998
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 167/355 (47%), Gaps = 36/355 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ KA R+++ + M K PSV Y+ L+ F K + +++L +D MVR
Sbjct: 570 VDGLGKAGRLDEAVSLLREMEKQ-GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
DV T++++I+ C++ D AL +F M+E+G P + ++ TL+ + K D +
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ E+ E + I+V+GL RV +AC+LV + +LP F Y L++ L
Sbjct: 689 QIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGL 748
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G A + ++ ++G+ P V+A T+L++ L + K A + M K+ +PD
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD--------------GM---------- 436
VT++ L++ L GR +A + +KG P+ GM
Sbjct: 809 VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868
Query: 437 -----------TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TY+ L+SG + R E L+ EM G +PDL TYN +DG+
Sbjct: 869 MQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 143/288 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN L++ F+ D+A+ + M + P VVT+ L+ G + + D A+ L REM
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++GC P+VV++++L+ F+ + +E +++ EM+ GC T ++++ LC V
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A ++ G+ P +Y L+ L + AL++ +EL + +P ++
Sbjct: 651 QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMV 710
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
GL + + EA L++ M + ILPD T+ LL+ L GR +A + + +G +
Sbjct: 711 NGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHE 770
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
PD + Y L+ + + + M + +PD+ TY+S +D L
Sbjct: 771 PDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSL 818
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ +N K++ ++ L F M++ +G P + Y L++ VK + D AL ++
Sbjct: 636 YSLVINCLCKSDDVDQALDVFGRMKE--EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNE 693
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + PD +NI+++G ++ + D A L M+ + P++ ++ +L+ G +
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E NM +M E G E V L+D L G++ A + +++ +P Y
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ L EG A + KG P+V ++LI+ + A L E+M +
Sbjct: 814 LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQ 873
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P+ VT+N LL L GR A++L G PD +TY+IL+ G + E E
Sbjct: 874 CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAE 933
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M ++G +PD+ T+ S ++ L K
Sbjct: 934 SYFKRMKEKGIVPDVITFTSLIESLGKVDK 963
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 177/446 (39%), Gaps = 61/446 (13%)
Query: 92 DFHI----FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLN-------------- 133
D H+ F WA D + H T+ +++ LA + + +L
Sbjct: 161 DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLL 220
Query: 134 ------FISANPCPCSND-----GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
F S N + + F C +++F + VK + ++ F + +
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ 280
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+P + + ++ F + D A M++ + P V TF +LI ++ D
Sbjct: 281 F-RIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNID 339
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A F M+ C+PNVV++ TL+ G + +E + EM E C ++ L+
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGL G AC L + RG++P Y ++ L G A ++ +L ++G +
Sbjct: 400 DGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV 459
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG----ILPDS------------------ 400
P V TLI+ L + + + ++++M+++G I DS
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYP 519
Query: 401 ---------VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+T+N L+ G +A +L + P +TY LV G + R
Sbjct: 520 SLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRL 579
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYM 477
E +L+ EM +G P + TY+S M
Sbjct: 580 DEAVSLLREMEKQGCEPSVVTYSSLM 605
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 175/434 (40%), Gaps = 61/434 (14%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI----------------FSC--- 150
T+ +V LA + R E V F+ CS D I +C
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEV--FVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415
Query: 151 PEME--------RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK 202
EM+ R ++ ++ KA R + F +++ P V YN LI+ K
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ-GAVPDVFTYNTLIDVLGK 474
Query: 203 CREFDKALGFYDRMVR----------------------DRV--KPDV-------VTFNIL 231
+ DK L MV DR P + +T+N L
Sbjct: 475 GGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTL 534
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
+S F N D A+ L M++ C P VV++ TL+ G + DE V++ EM + GC
Sbjct: 535 MSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGC 594
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
E S VT L+ + ++ L + R+G + Y ++ LC + AL+
Sbjct: 595 EPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALD 654
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
V + ++G P + TL+ L + K A + ++ + ++PD+ +N ++ L
Sbjct: 655 VFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
R +A +L + + PD TY L+ G + R +E N+ +M +EG PD+
Sbjct: 715 KSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVV 774
Query: 472 TYNSYMDGLSNARK 485
Y S MD L K
Sbjct: 775 AYTSLMDVLGKGGK 788
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 10/293 (3%)
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKG 255
ING ++ R++D +G ++ ++ P +V +++++ K LA F ++ G
Sbjct: 123 INGVIRRRKWDAEMGKQLERLKFKLNPGLVC-DVVVN----QKDLHLAKCFFTWAGQQDG 177
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
+ V ++ +I+ G ++ D V + M + G S L+ + V A
Sbjct: 178 YSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGAL 237
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
E+ G P Y ++E L G A+ V +L + P +
Sbjct: 238 EIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSF 297
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL--DP 433
R + A+ +++M+K GI P TF L++ L G +A + K L P
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEA--CKFFNGMKNLRCSP 355
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +TY LV+G + R +E + EM + PD YN+ +DGL A ++
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEA 408
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 36/155 (23%)
Query: 149 SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDK 208
CP ++ ++ KA R+N E M K + P + YN+LI+G K D+
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEK-VGCVPDLVTYNILIDGVGKMGMVDE 931
Query: 209 ALGFYDRMVRDRVKPDVVTF-----------------------------------NILIS 233
A ++ RM + PDV+TF N+LI
Sbjct: 932 AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
R K A +F EM+ KGC P+ ++ + R
Sbjct: 992 ILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 2/338 (0%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C ++ +N+F+ R+ D + FE + P V +NV I G + +
Sbjct: 186 FGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQ 245
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTL 266
KAL +RM PD VT NIL+ G CR K+ + R ++ G C PNVV++ ++
Sbjct: 246 KALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSV 305
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I G+ + ++ + + +MI G ++VT +L++G G + A + R
Sbjct: 306 ISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRC 365
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + L++ C G A+ E+ + P+ + +I + + EA
Sbjct: 366 PPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALR 425
Query: 387 LMEKM-LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++++ ++ I P + N +++ LC G+ +A+ + + KG PD TY IL+ G+
Sbjct: 426 FLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIGH 485
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ R E N+M+D G PD T NS++ L A
Sbjct: 486 CMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKA 523
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 152/377 (40%), Gaps = 24/377 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNF-------------ISANPCPCSNDGIFSC---- 150
H L+I ++LAS+ F H +L F + PC S +FS
Sbjct: 55 SHDAELWIAKALASA-AFLRPHHLLAFRRLAPSPVAAAAALRHAPCASSTLQLFSALHSS 113
Query: 151 ----PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
P + + ++ +++R D L F+ M P+ + L
Sbjct: 114 QLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFL 173
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC-NPNVVSFNT 265
D A + + + +N L++ F + A+ LF + G +P+V SFN
Sbjct: 174 DAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNV 233
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
I+G + + + M E GC +VT ILV GLC V + E++ R G
Sbjct: 234 AIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDG 293
Query: 326 V-LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
V +P Y ++ C G A+ V +++ G P+ + LI G + A
Sbjct: 294 VCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSA 353
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ ++M+ PD VTF+ L++ C G+ DA R S + P+ T+ I++
Sbjct: 354 VAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILS 413
Query: 445 YTRENRRKEGENLVNEM 461
+ ++NR E + E+
Sbjct: 414 FCKQNRSAEALRFLKEL 430
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 178 EAMRKLI-DG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
E +R+L DG P+V Y +I+G+ K + A+ Y+ M+ P+ VT+N+LI+G
Sbjct: 284 EVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLING 343
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+ + A+ ++++M + C P+VV+F+TLI G+ + D+ + EM + + +
Sbjct: 344 YGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPN 403
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFS-RRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ T I++ C + R +A + + + R + P+ F +++ LC G A ++
Sbjct: 404 AHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLIL 463
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG P T LI G + EA KM+ G PDS+T N + L
Sbjct: 464 MEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKA 523
Query: 414 GRTVDADRLRLLAS 427
G + DR+ +AS
Sbjct: 524 GMPSEVDRIMKIAS 537
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 2/169 (1%)
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW-KKGNLPSVIACTTLIEGLRRLRK 380
S+ + P Y ++ LC AL++ D++ + G+ P+ + L
Sbjct: 113 SQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGF 172
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYH 439
A+ L+ K + G ++ +N L+ GR DA L PD +++
Sbjct: 173 LDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFN 232
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + G + ++ LV M + G PD T N + GL ++ R
Sbjct: 233 VAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSR 281
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 181 RKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
+++ID +P+ YN LI+G++ ++ + + + M +KPD T+ L++ C+N
Sbjct: 258 QQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKN 317
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
+ A F M KG P V ++ LI G+ + E + M+E G
Sbjct: 318 GRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
I G + KA ++ + G+ P +Y L++ LC G A +++
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 437
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+G P+++ +L+ GL + K A L+ +ML +GI P++V FN L+ +LC+VGR ++
Sbjct: 438 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 497
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
RL L G+ PD +Y L+SGY R E E + + M+ G P TYN+ +
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557
Query: 479 GLSNARK 485
G +A +
Sbjct: 558 GYCSASR 564
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 140/293 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P I+N+ + + KC DKA+ +++M + + P+VV + LI C+ + D A
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M +G PN+V FN+L+ G K++ + YEM++ G ++V L+ LCN
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCN 491
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GRV++ L+ GV P F Y L+ C G A +V D + G P+ +
Sbjct: 492 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G + +A L +ML++G+ P VT+N +L L R +A L L
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G D TY+I+++G + N E + + +G ++ T+ + L
Sbjct: 612 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 664
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 3/324 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N K R + F++M RK I +P VS Y +LI+G+ + F D MV +
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGI--KPKVSTYGILIHGYATKGALSEMHSFLDLMVEN 368
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD FNI S + + D A+ +F +MR+ G +PNVV++ LI + D+
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+MI G + V LV GLC + +A ELV + +G+ P + L+
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G ++D + G P + T LI G + EA + + M+ G+ P
Sbjct: 489 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+N LL C R DA L KG+ P +TY+ ++ G + R E + L
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 608
Query: 460 EMLDEGFIPDLATYNSYMDGLSNA 483
M++ G D+ TYN ++GL +
Sbjct: 609 NMINSGTKCDIYTYNIILNGLCKS 632
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 170/343 (49%), Gaps = 15/343 (4%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCR---E 205
C E+ERI A A ++ ++D L F+ + L RP SV +N L+ + R
Sbjct: 12 CLELERII--AERARSRSLGLDDALKLFDEL--LHHARPASVRAFNHLLTAVSRARCSSA 67
Query: 206 FDKALGFYDRMVR---DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
+ A+ ++RMVR D+V P++ T++ILI FCR + F + + G + ++
Sbjct: 68 SELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIA 127
Query: 263 FNTLIRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELV--- 318
N L++G ++ E +++ + M ELGC +V+ IL+ GLCNE R +A EL+
Sbjct: 128 INQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMM 187
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
D R P Y ++ EG + E+ +G P V+ TT+I+GL +
Sbjct: 188 ADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKA 247
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ A G+ ++M+ G P++ T+NCL+ +G+ + ++ S +GL PD TY
Sbjct: 248 QLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTY 307
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
L++ + R +E + M+ +G P ++TY + G +
Sbjct: 308 GSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYA 350
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 166/364 (45%), Gaps = 11/364 (3%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
+T+ ++ A+ SE+HS L+ + N P+ IF+ +A+ K
Sbjct: 340 STYGILIHGYATKGALSEMHSFLDLMVENGLS---------PD-HHIFNIFFSAYAKCGM 389
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++ + F MR+ P+V Y LI+ K D A +++M+ + V P++V FN
Sbjct: 390 IDKAMDIFNKMRQH-GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+ G C K++ A L EM ++G PN V FNTLI + EG + M +
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + + L+ G C GR +A ++ G+ P + Y L+ C A
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ E+ +KG P V+ T++ GL + ++ EA L M+ G D T+N +L
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC +A ++ +KGL + +T+ I++ + R+++ +L + G +P+
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688
Query: 470 LATY 473
+ TY
Sbjct: 689 VVTY 692
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 11/343 (3%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI------YNVLINGFVKCREFDK 208
R+ H A+N +K + G EAM L+ P + Y +L+ G + ++
Sbjct: 122 RMDHIAINQLLKG--LCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEE 179
Query: 209 ALGFYDRMVRD---RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
AL M D R P+VV+++I+I+GF + D LF EM ++G P+VV++ T
Sbjct: 180 ALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTT 239
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I G + FD + +MI+ G + ++ T L+ G + G+ + +++ + S RG
Sbjct: 240 VIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P + Y L+ LC G A D + +KG P V LI G E
Sbjct: 300 LKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMH 359
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++ M++ G+ PD FN G A + GL P+ + Y L+
Sbjct: 360 SFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ R + E N+M++EG P++ +NS + GL K R
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 462
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 6/283 (2%)
Query: 181 RKLID------GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
R+LID RP Y LI+G+ D+A +D MV + P VT+N L+ G
Sbjct: 499 RRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 558
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+C + D A LFREM KG P VV++NT++ G F ++F E + MI G +
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 618
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
T I+++GLC V +A ++ +G+ + ++ L G A+++
Sbjct: 619 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 678
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ G +P+V+ + E L E L M K G P+S N L+ L G
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 738
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
A + + T +L+S +T + + ++L
Sbjct: 739 DISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 191/434 (44%), Gaps = 24/434 (5%)
Query: 62 LTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWA-STIDSFRHDHTTFLFIVRSLA 120
+ P ++ P L+ + + Q IF +A + F H++ T+ I+ L+
Sbjct: 40 IKPWPQRLFPKRLVSMITQQ-----QNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 94
Query: 121 SSYRFSELHSVLNFI--SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+ F + S++ + S P C E +F + + A R + F
Sbjct: 95 RARAFDPVESLMADLRNSYPPIKCG----------ENLFIDLLRNYGLAGRYESSMRIFL 144
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCR 237
+ R SV N L+N ++ + FD + + P++ T N+L+ C+
Sbjct: 145 RIPDFGVKR-SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK 203
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ A + E+ G PN+V++ T++ G+ + + EM++ G + T
Sbjct: 204 KNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATT 263
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
+L+DG C GR +A ++ D + + P + Y ++ LC E +G A + DE+
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 323
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
++ +P C +I+ L K EA GL KMLK +PD+ + L+ LC GR
Sbjct: 324 ERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT 383
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L KG P +TY+ L++G + E L ++M + P+ TYN +
Sbjct: 384 EARKL-FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Query: 478 DGLS---NARKSVR 488
+GLS N ++ VR
Sbjct: 443 EGLSKNGNVKEGVR 456
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 15/281 (5%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y VL++G+ K F +A D M ++ ++P+ VT+ ++I C+ KK A +
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+ P+ +I + K DE + +M++ C + L+ LC
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 378
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGRV +A +L +F + G +P Y L+ +C +G A + D+++++ P+
Sbjct: 379 EGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT 437
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIEGL + E ++E+ML+ G P+ TF L E L +G+ DA ++ +A
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
G D ++ + + + E LD+G +P
Sbjct: 498 MNG-KVDKESWELFLKKFAGE-------------LDKGVLP 524
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 2/239 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ + K R ++ + M K + P+ Y V+I K ++ +A +D M
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD +I C + K D A GL+R+M + C P+ +TLI E +
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + ++ E G S +T L+ G+C +G + +A L D R P F Y L
Sbjct: 383 TEARKL-FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+E L GN + V++E+ + G P+ L EGL++L K +A ++ + G
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 158/336 (47%), Gaps = 1/336 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+H ++ + L+ F+ +++ PSV Y LIN + K + KAL
Sbjct: 436 IYHTMMDGYTMIRNEEKCLIVFKRLKEC-GFAPSVITYGCLINMYTKIGKVSKALEVSKM 494
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +K ++ T+++LI+GF + K + A +F ++ + G P+VV +N +I+ F G
Sbjct: 495 MKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGN 554
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D ++M EM + C +S T ++ G G + +A E+ R G +P +
Sbjct: 555 MDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNA 614
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV L + A+E++DE+ G P TT++ G L +A KM EG
Sbjct: 615 LVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEG 674
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D T+ LL+ C GR A + + + + + Y+IL+ G+ R E
Sbjct: 675 LQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAA 734
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+L+ +M EG PD+ TY S+++ A +R T+
Sbjct: 735 DLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATK 770
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 36/355 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + K +++ L M K + + ++ Y++LINGF+K +++ A ++ +++D
Sbjct: 476 INMYTKIGKVSKAL-EVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDG 534
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFRE------------------------------ 250
+KPDVV +N +I FC D A+ + +E
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRAL 594
Query: 251 -----MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
MR GC P V +FN L+ G +RK ++ V + EM G T ++ G
Sbjct: 595 EIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGY 654
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
G KA E G+ F Y L++ C G AL V E+ + +
Sbjct: 655 AALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNT 714
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
LI+G R EA+ LM++M +EG+ PD T+ + C G + A +
Sbjct: 715 FVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEE 774
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G+ P+ TY L+ G+ + ++ + E+ G PD A Y+ M L
Sbjct: 775 MEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSL 829
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 1/270 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C R F ++ F +A M L F+ MR+ P+V +N L+ G V+ R+ +KA
Sbjct: 570 CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRR-SGCIPTVHTFNALVLGLVEKRKMEKA 628
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ D M V PD T+ ++ G+ A F +MR +G +V ++ L++
Sbjct: 629 VEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKA 688
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + + EM ++ IL+DG G + +A +L+ ++ GV P
Sbjct: 689 CCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPD 748
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y + C G+ A + ++E+ G P+V TTLI G +A E
Sbjct: 749 IHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFE 808
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
++ G+ PD ++CL+ L +A
Sbjct: 809 ELKLAGLKPDKAVYHCLMTSLLSRATVAEA 838
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 146/338 (43%), Gaps = 15/338 (4%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
R F V + + M+ FE+MR + ID PS +Y LI+ + R+ ++AL
Sbjct: 295 REFGLMVGYYARRGDMHRARQTFESMRARGID--PSSHVYTSLIHAYAVGRDMEEALSCV 352
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M + ++ +VT++I++ GF + + A F++ +E+ N N + +I +
Sbjct: 353 RKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQA 412
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC---NEGRVLKACELVIDFSRR---GVL 327
D + EM E G + ++DG NE + L I F R G
Sbjct: 413 CNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCL------IVFKRLKECGFA 466
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ G ALEV + G ++ + LI G +L+ A +
Sbjct: 467 PSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAV 526
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
E ++K+G+ PD V +N +++ C +G A + + P T+ ++ G+ R
Sbjct: 527 FEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFAR 586
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + + M G IP + T+N+ + GL RK
Sbjct: 587 AGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRK 624
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 154/305 (50%), Gaps = 5/305 (1%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V +Y +IN + + +A +D V + ++P+ T+ +LI+GFC+ + + A L
Sbjct: 237 VYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLA 296
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M+ +G N + FNT+I G+ + D + + M ++G E T L GLC
Sbjct: 297 DMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVN 356
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
R+ +A L+ +GV P Y L+ C EG+ A + E+ KG +PSV+
Sbjct: 357 RMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYN 416
Query: 370 TLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+++G ++KG EA ++M K+G++PD T+ L+ C G+ A +L
Sbjct: 417 VMMDGY--IKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL-SNARKS 486
+G +P+ + Y L+SG +E R +E L ++ML G PD + Y++ + L ++ RK
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534
Query: 487 VRQTR 491
+ +
Sbjct: 535 IHHKQ 539
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 147/325 (45%), Gaps = 13/325 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI------YNVLINGFVKCREFDKALGFYD 214
V+ F K+ R++D R L+D P + YN L++ +V+ ++ + +
Sbjct: 139 VDGFCKSGRVDDA-------RALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLE 191
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++ V T+ IL+ + EM+ K +V + +I +
Sbjct: 192 IMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAG 251
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + G E + T +L++G C G++ A L+ D RGV +
Sbjct: 252 NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ C +G AL+V + K G V TL GL R+ + EA L+ M+++
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ VT+ L+ C G V+A RL + KG P +TY++++ GY ++ +E
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
E EM +G +PD+ TY S + G
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHG 456
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 148/336 (44%), Gaps = 48/336 (14%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ +V SL+++ S++ +V++ + A ++ ++ +NA+ +A +
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMKAKNVAGD---VY-------LYTAVINAYCRAGNV 253
Query: 171 NDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVK--------------------------- 202
F E + I+ P+ Y VLINGF K
Sbjct: 254 RRASEVFDECVGNGIE--PNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311
Query: 203 ------CRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
CR+ D AL M + ++ DV T+N L G CR + A L M EK
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
G PN V++ TLI E E + EM G S VT +++DG +G + +A
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+ ++G++P + Y LV C G +AL++ +E+ +G P+V+A T LI G
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
L + + EA L + MLK G+ PD ++ L+ L
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V Y +L++ + K D M V DV + +I+ +CR A +F
Sbjct: 201 TVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVF 260
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
E G PN ++ LI GF + + + +M G + + ++DG C +
Sbjct: 261 DECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQ 320
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
G V A ++ + G+ + Y L LC A ++ + +KG P+ +
Sbjct: 321 GMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTY 380
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TTLI + VEA L +M +G +P VT+N +++ G +A+R R
Sbjct: 381 TTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEK 440
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL PD TY LV G+ + L EM G P++ Y + + GL+ +S
Sbjct: 441 KGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRS 498
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 2/248 (0%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++++ GFC++ + D A L EM G N + +N+L+ + RK D V E++E
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYV-RRKDDARVQELLEIME 194
Query: 289 -LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G E + T ILVD L G + K +V + + V + Y ++ C GN
Sbjct: 195 NGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVR 254
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A EV DE G P+ LI G ++ + A L+ M G+ + + FN ++
Sbjct: 255 RASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMI 314
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ C G +A +++ G++ D TY+ L G R NR E + L++ M+++G
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374
Query: 468 PDLATYNS 475
P+ TY +
Sbjct: 375 PNYVTYTT 382
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 81/186 (43%)
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S + ++VDG C GRV A L+ + R GV Y L++ + E++
Sbjct: 131 SPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELL 190
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + G +V T L++ L + ++++M + + D + ++ C
Sbjct: 191 EIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRA 250
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A + G++P+ TY +L++G+ + + + E L+ +M G + +
Sbjct: 251 GNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIF 310
Query: 474 NSYMDG 479
N+ +DG
Sbjct: 311 NTMIDG 316
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 160 AVNAFVKANRMNDGLLA------FEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKAL 210
A+ + V N M DG + E RK ++ + P V Y L++G + D AL
Sbjct: 408 AMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVAL 467
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
++ M +P+VV + LISG + + + A L+ +M + G P+ ++ L+
Sbjct: 468 KLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Query: 271 FGERKFD 277
+ + D
Sbjct: 528 HTDNRKD 534
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 174/377 (46%), Gaps = 9/377 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + SE S++ + + S +F+ +
Sbjct: 3 TNSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRS 62
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + + R+ P + VL +K + F GF
Sbjct: 63 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVL-EHLMKLKYFKLVWGF 121
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y ++ + FNIL+ FC+ +A + + + G P+VVSFNTLI G+
Sbjct: 122 YKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIR 181
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A EL + +G++P
Sbjct: 182 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVT 241
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L++ C G +A+E+ ++ + P +I TLI GL + + +A L+++M
Sbjct: 242 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMS 301
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
EG+ PD +T+ L++ C G A + + + D + Y L+SG +E R
Sbjct: 302 MEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSV 361
Query: 453 EGENLVNEMLDEGFIPD 469
+ E ++ EML G P+
Sbjct: 362 DAEKMLREMLSVGLKPN 378
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 2/259 (0%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+ D+ F+ LI+ + + A+ +R RE + + ++ + F
Sbjct: 61 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWG 120
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKL 340
E++E G S IL+ C EG + + +LV++ ++ G+ P + L+
Sbjct: 121 FYKEILECGYPASLYFFNILMQRFCKEGDI-RVAQLVLNAITKWGLRPSVVSFNTLINGY 179
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G+ + + G P V + LI GL + K +A+ L ++ML +G++P+
Sbjct: 180 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNG 239
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VTF L++ C GR A + ++ L PD +TY+ L+ G ++ K+ +L++E
Sbjct: 240 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDE 299
Query: 461 MLDEGFIPDLATYNSYMDG 479
M EG PD TY + +DG
Sbjct: 300 MSMEGLKPDKITYTTLIDG 318
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+++ C EG+ +A V++ + K G PSV++ TLI G RL E
Sbjct: 131 PASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFR 190
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC + DA+ L KG+ P+G+T+ L+ G+
Sbjct: 191 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHC 250
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + PDL TYN+ + GL
Sbjct: 251 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 284
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 166/336 (49%), Gaps = 7/336 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F KA +++ + M++ + V +++ LI G + D+AL +
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKER-GVKMDVLLHSTLIQGLCRKGRIDEALEQFKS 59
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-----GCNPNVVSFNTLIRGF 270
M + P+V+T+N +++G C+ + D L LF +M ++ GC P+V+S++T+I
Sbjct: 60 M-GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
++ D+ M +GC + VT L+DGLC RV +A L++ ++P+
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V +G LE++ + +KG ++I ++ L + + +A E+
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+LK G P+ VT+N + LC G+ +A R+ L + PD +TY ++ G+ + R
Sbjct: 239 LLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 298
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +++ M+ IP T+ + + G S +KS
Sbjct: 299 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKS 334
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 39/363 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG----RPSVSIYNVLINGFVKCREFDKALGF 212
++ VN KANR+++GL F+ M K + P V Y+ +I+ K + DKA +
Sbjct: 71 YNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 130
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ RM P+VVT++ LI G C+ + D A L +++ + P + +N ++ GF
Sbjct: 131 FKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKR 190
Query: 273 ERKFDEGVNMAYEMIELG------------------------CEF-----------SSVT 297
+ K E + + M E G C+F + VT
Sbjct: 191 QGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVT 250
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
+ V GLC G+V +A ++++ V P Y +++ C G A +V +
Sbjct: 251 YNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 310
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+P + TL+ G +K EA + E M+ G +P T+N L++ +C
Sbjct: 311 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 370
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A + K PD TY L+ R R E + ++ M + +P+ A ++ +
Sbjct: 371 SALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 430
Query: 478 DGL 480
+ L
Sbjct: 431 EVL 433
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 150/347 (43%), Gaps = 22/347 (6%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++A K + FE R L G+ P+V YNV ++G K + D+A
Sbjct: 216 FNAMLHALWKNDEQEKACQFFE--RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLE 273
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +V PDV+T++ +I GFC+ + D A +F M C P+ V+F TL+ GF +K
Sbjct: 274 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 333
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + +M+ G T +L+D +C V A E+ R+ P Y
Sbjct: 334 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAP 393
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM------- 388
L++ LC A E +D + +P+ C L+E L + + EA ++
Sbjct: 394 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEIC 453
Query: 389 ------------EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
E+M+ +G+ PD T+ +L LC + R A +++G P +
Sbjct: 454 KAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLV 513
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
TY +L+ + + + M+ GF P T + L +A
Sbjct: 514 TYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDA 560
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 154/349 (44%), Gaps = 36/349 (10%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
K +++ + FE M+ D P V YN LIN F K KA F M + +KP+V
Sbjct: 302 KLGLLDECICIFEQMKD-ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VT++ I FC+ A+ F +MR PN ++ +LI E + + E
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV-------- 337
+++ G + + VT L+DGLC EGR+ +A E+ GV P Y LV
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480
Query: 338 ------------EK---------------LCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
EK LC E A ++ E+ + G + + TT
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L++ + + EA L+E+ML G++ VT+ L++ LC G +A S G
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L P+ Y LV G + N + + L +EMLD+G +PD Y + +DG
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 649
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 141/296 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN LI+G K D+ + +++M PDV+T+N LI+ FC+ ++ A
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+ G PNVV+++T I F E E + +M + + T L+D C
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A +LV + + G+ Y L++ LC EG A EV + G P+
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T L+ G + ++ A ++++M ++ I PD + + +L LC+ R +A L
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIK 527
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G++ + + Y L+ Y + + E L+ EMLD G I TY + +DGL +
Sbjct: 528 ESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKS 583
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 145/313 (46%), Gaps = 1/313 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + RM + F AM P+ Y L++GF+K +E + A M
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLN-AGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+KPD++ + ++ G C + + A L E++E G N N V + TL+ +F + E +
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM++LG + VT L+DGLC G V +A S G+ P Y LV+ L
Sbjct: 556 TLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +A ++ DE+ KG +P IA T LI+G + EA L ++M++ G+ D
Sbjct: 616 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 675
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+ L+ L G+ A L KG+ PD + Y L+ Y + E L NE
Sbjct: 676 HAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNE 735
Query: 461 MLDEGFIPDLATY 473
M G I L+ +
Sbjct: 736 MAKRGMITGLSDH 748
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 180/398 (45%), Gaps = 9/398 (2%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA F+H + +V L + +S+ ++VL + + +F R
Sbjct: 119 FEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATR 178
Query: 156 --------IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
+F +A ++ + + F MRK P N L++ K D
Sbjct: 179 NVCVPGFGVFDALFSALIELGMLEEASECFLKMRKF-RVFPKPRSCNALLHRLSKVGRGD 237
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+ F+ M +K V T+NI+I C+ ++A LF +M+E G P++V++N+LI
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
G DE + + +M + C+ +T L++ C R+ KA E + + G+
Sbjct: 298 DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y ++ C EG A++ ++ + P+ T+LI+ + EA L
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E++L+ GI + VT+ LL+ LC+ GR +A+ + G+ P+ TY LV G+ +
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ ++++ EM ++ PDL Y + + GL N +
Sbjct: 478 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++A KA + + L L E ++ I + +V Y L++G + +A + M+
Sbjct: 402 IDANCKAGNLAEALKLVEEILQAGI--KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V P+ T+ L+ GF + K+ + A + +EM+EK P+++ + T++ G E + +E
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ E+ E G ++V L+D G+ +A L+ + G++ + Y L++
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A+ + + G P+V T L++GL + A L ++ML +G++PD
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ + L++ G +A LR G++ D Y L+ G + + ++ NL++
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLD 699
Query: 460 EMLDEGFIPDLATY 473
EM+ +G +PD Y
Sbjct: 700 EMIGKGVLPDEVVY 713
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L++ P+V Y LI+ + K + + AL YD M + PDVVT+ +++G C++ K +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A +FREM E G PN S+ TLI F E E + M+ G F V L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGL G A ++ ++P Y L++ C G+ ++ E+ +K
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259
Query: 363 PSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDV-GRTVDA 419
P+VI +++++G +KG+ EA +M KM++ ILP+ + L++ R +
Sbjct: 260 PNVIVYSSIVDGYT--KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D + + S +GL+ + V+ R R +E + L +M+ G +PD Y S MDG
Sbjct: 318 DLFKEMKS-RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 480 LSNARK 485
A K
Sbjct: 377 FFKAGK 382
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 149/297 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R SV +NVLI+G+ + E +A+ + M + PD+VT+N L++GFC+ A
Sbjct: 14 RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L E+ PNV+++ TLI + + ++ + M EM VT +++GLC
Sbjct: 74 LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+V +A + + GV+P F Y L++ L EGN A + + +G V+
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T L++GL + A + + +L+E ++P+ VT++ L++ C +G + L
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K + P+ + Y +V GYT++ E +++ +M+ +P++ Y + +DG A
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+ LI+G K + +K M + P+V+ ++ ++ G+ + + A+ +
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M ++ PNV + TLI G+F + +++ EM G E ++ + V+ L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A EL D RG+LP +Y +++ G A + E+ +K + V+A
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI GL +L K E+ M + G+ PDS TFN ++ C G +A +L
Sbjct: 405 YNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ GL P+ +T +ILV ++ +L+N+ML GF P T+ + +D S +R++
Sbjct: 464 SYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 13/340 (3%)
Query: 158 HFAVNAFV----KANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
+F +++FV ++ RM + F+ M R L+ R + Y +++GF K + A
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN---YTSMMDGFFKAGKESDAFN 388
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
M DVV +N+LI+G + K++ + MR+ G P+ +FNT+I +
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYC 447
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + + EM G + +S+TC ILV LC G + K +L+ D G P
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ A + L + D+L G + TLI RL A+ + + M
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +GIL D +T+N L+ C A + T+G+ P+ TY+IL+ G +
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG---LSNARKSVR 488
KE LVN+M + G +P+ TY+ + G + N ++ V+
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVK 667
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 2/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F KA + +D + M + G V+ YNVLING K +++ F+ M +
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVA-YNVLINGLFKLGKYESE-SFHTGMRQLG 431
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD TFN +I+ +C+ AL L EM+ G PN ++ N L++ + ++ +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M+ +G + T + ++D R + GV Y L+
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A V ++ KG L +I LI G +A + +ML EG+ P+
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL L +A L +GL P+ TY ILVSG+ + KE L E
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +GF+P TYN + + +K
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKK 696
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +IN + K AL + M +KP+ +T NIL+ C + + + L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G +P + ++ R+ D ++M +++ +G + T L+ C
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + D +G+L Y L+ C + A V ++ +G P+V
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ GL R EA+GL+ +M + G++P++ T++ L+ +G + +L
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMI 673
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
TKG P TY++L+S + + + + + L+ EM G P+ +TY+
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYD 720
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 20/279 (7%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+S YN LI+ F + +A + M+ + D++T+N LI G+C + A +
Sbjct: 541 LSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHS 600
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M +G +PNV ++N L+ G R E + +M E G ++ T +ILV G G
Sbjct: 601 QMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+ + +L + +G +PK Y L+ A E++ E+ +G P+
Sbjct: 661 NMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYD 720
Query: 370 TLIEGLRRLRK------------GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
LI G +L K EA L E+M ++G +P T C+ L G+
Sbjct: 721 ILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKA 780
Query: 418 DADR-LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
DA R L L K T L++G E+R ++G+
Sbjct: 781 DAQRILNKLYKKK-------TVQELLAGVLWESRERKGK 812
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
SV LI+G R + A L+E M EG PD VT+N L+ C +G A +L
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
S L+P+ +TY L+ Y + ++ + +EM + +PD+ TY M+GL +
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 484 RK 485
K
Sbjct: 136 GK 137
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + Y++L++G K + + Y M+ P T+N+LIS F + KK A L
Sbjct: 644 PNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 248 FREMREKGCNPNVVSFNTLIRGFF 271
+EM+ +G PN +++ LI G++
Sbjct: 704 MQEMQVRGIPPNSSTYDILICGWY 727
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 154/329 (46%), Gaps = 32/329 (9%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
A + +R+ IDGR P+V +YN +I+ K + +A + M + +VVT++ +I
Sbjct: 187 AIQLLRR-IDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC K ALG EM K NP+V +NTL+ E K E N+ +++ +
Sbjct: 246 HGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLK 305
Query: 293 FSSVTCEILVDG---------------------------LCNEGRVLKACELVIDFSRRG 325
+ +T L+DG LC RV +A L + ++
Sbjct: 306 PNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKN 365
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
++P Y L++ LC G A +++DE+ +G+ +VI +LI GL + + +A
Sbjct: 366 MVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAI 425
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDL-CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM +GI PD T N LL L C R +A L KG P+ TY+I++ G
Sbjct: 426 ALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYG 485
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ +E E L ++M D G P+ T+
Sbjct: 486 HCKEGLLDEAYALQSKMEDSGCSPNAITF 514
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 13/322 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N F ++N LAF + K++ +P LI G + KAL F+D+++
Sbjct: 105 INCFCHLGQIN---LAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ D V++ LI+G C+ + A+ L R + + PNVV +NT+I + E
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
N+ EM G + VT ++ G C G++ +A + + + + P + Y LV+
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
L EG A V+ + K P+VI TLI+G + A GLM G+ P
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--HVFNAVGLM------GVTP 333
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D ++N ++ LC + R +A L K + P+ +TY+ L+ G + R +L+
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393
Query: 459 NEMLDEGFIPDLATYNSYMDGL 480
+EM D G ++ TYNS ++GL
Sbjct: 394 DEMHDRGHHANVITYNSLINGL 415
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 170/393 (43%), Gaps = 38/393 (9%)
Query: 118 SLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAF 177
S + RFS S L F S P P S P++ FH +F ++D L F
Sbjct: 2 SFPTRLRFSVSLSTLKFPSFLPNP-------SLPKLHSHFHSRPPSF---ENVDDALFQF 51
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
M + P + +N +++ F K + + + R+ ++PD T NILI+ FC
Sbjct: 52 HRML-CMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCH 110
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ +LA + ++ + G P+ V+ TLI+G + + + ++ +++ G V+
Sbjct: 111 LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVS 170
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
L++G+C G A +L+ R P Y +++ LC A + E+
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMS 230
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
KG +V+ + +I G + K EA G + +M+ + I PD +N L++ L G+
Sbjct: 231 VKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVK 290
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRE---------------------------NR 450
+A + + L P+ +TY+ L+ GY + R
Sbjct: 291 EAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKR 350
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+E NL EM + +P+ TYNS +DGL +
Sbjct: 351 VEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 50/285 (17%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+V YN LI+G+ K A+G V PDV ++NI+I+ C+ K+ + AL
Sbjct: 305 KPNVITYNTLIDGYAK--HVFNAVGLMG------VTPDVWSYNIMINRLCKIKRVEEALN 356
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM +K PN V++N+LI DGLC
Sbjct: 357 LYKEMHQKNMVPNTVTYNSLI-----------------------------------DGLC 381
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
GR+ A +L+ + RG Y L+ LC G A+ +++++ +G P +
Sbjct: 382 KSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMY 441
Query: 367 ACTTLIEGL----RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ GL +RL+ A GL + +L +G P+ T+N ++ C G +A L
Sbjct: 442 TLNILLHGLLCKGKRLK---NAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYAL 498
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ G P+ +T+ I++ + + E L+ EM+ G +
Sbjct: 499 QSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGF-CRNKKFDLALGL 247
+V YN LING K + DKA+ ++M ++PD+ T NIL+ G C+ K+ A GL
Sbjct: 404 NVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGL 463
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+++ +KG +PNV ++N +I G E DE + +M + GC +++T +I++ L
Sbjct: 464 FQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLE 523
Query: 308 EGRVLKACELVIDFSRRGVLPK 329
+G KA +L+ + RG+L +
Sbjct: 524 KGETDKAEKLLCEMIARGLLKR 545
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 35/279 (12%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D AL + RM+ R P ++ FN ++ F + K + + L R + K P+ + N L
Sbjct: 45 DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I F C+ G++ A ++ + G
Sbjct: 105 INCF-----------------------------------CHLGQINLAFSVLSKILKWGY 129
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P L++ LC +G AL D+L +G ++ TLI G+ ++ + A
Sbjct: 130 QPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQ 189
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+ ++ P+ V +N +++ LC +A L S KG+ + +TY ++ G+
Sbjct: 190 LLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFC 249
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ E +NEM+ + PD+ YN+ +D L K
Sbjct: 250 IVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGK 288
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 221/545 (40%), Gaps = 85/545 (15%)
Query: 9 PPILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVT-----LTPTAHHTHLLRFLKTHLLT 63
PP I + P+P + P TP LP V P L F KT LL
Sbjct: 27 PPEWIEPYTDLADPSPYTSASAAPPTPSPWLPRVVSLVLRAPPATLAADLRAFCKTFLLR 86
Query: 64 PTNNQIT-----------PSSLLHFLKS-----KLHHHPQFTHYDFHIFAWASTIDSFRH 107
+ + P LHF +S L HPQ D + + S + SF H
Sbjct: 87 LSPAFVAAALRSPQLLTHPLPSLHFFRSLPNGADLAAHPQ----DL-LNCYVSLLHSFAH 141
Query: 108 DHTTFLFIVRSLASSYR--FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
A R +EL + + + + P S+ + + +
Sbjct: 142 SREA----TPDAADHARQLVAELRARGDAVLMHLTPPSSASL-------------IRSLA 184
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM-VRDRVKPD 224
++ L A+ AMR L PS YN L++G D A+ +D M DRV+PD
Sbjct: 185 ALGLADELLWAWSAMR-LAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPD 243
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNTLIRGFFGERKFDEGVNMA 283
VV++NILI G+CR + A+ MRE+ +P+ V++ TL++ + E F + + +
Sbjct: 244 VVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLF 303
Query: 284 YEMIELGC--EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
EM E+G + +++ LC EG+ + + + G K Y L++ +
Sbjct: 304 QEMEEMGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMG 363
Query: 342 GEGN-------------AGIALE------VVDELWKKGNLPSVIAC-------------- 368
G +G+ L+ +V+ L + G L I C
Sbjct: 364 KFGRENEAMLLFERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAI 423
Query: 369 --TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G + +A L E+M +G +PDS +N L++ L GR DA L
Sbjct: 424 FYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRM 483
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G D TY I++ G ++++ +E N M+D+G P A + ++ +GL + K
Sbjct: 484 EDDGCDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKF 543
Query: 487 VRQTR 491
R R
Sbjct: 544 SRACR 548
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 4/315 (1%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS-VSIYNVLINGFVKCREFDKALGF 212
+ + + A K + +GL FE M K G P+ ++Y LI+ K ++A+
Sbjct: 317 QHAYVLVIGALCKEGKPFEGLAVFERMLK--SGYPAKAAMYTALIDTMGKFGRENEAMLL 374
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++RM ++ D +T+ ++++ CR K D A+ FR EKG N + + +LI GF
Sbjct: 375 FERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGK 434
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
D+ + EM G S +L+DGL GR+ AC L G +
Sbjct: 435 AGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGCDQTVYT 494
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y +++ L + A++ + + KG P+ A T GL K A +++++
Sbjct: 495 YTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRACRILDELA 554
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G++P++ + ++ LC GR A +L KG + G ++++ +
Sbjct: 555 PMGVIPETAHED-MINVLCKAGRFKQACKLADGIVQKGREIPGRVRTMMITALRKAGNTD 613
Query: 453 EGENLVNEMLDEGFI 467
LV+ + G++
Sbjct: 614 LAVKLVHSKIGIGYV 628
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 154/313 (49%), Gaps = 4/313 (1%)
Query: 176 AFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
AFE + K+ +G RP+V IYN++++G K +A Y +V + PDV T+ LI
Sbjct: 202 AFELLHKM-EGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLI 260
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC ++ L +M ++ N NV ++N LI + + +M MIE G
Sbjct: 261 HGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQR 320
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
VT L+ G C V++A +L F+ G+ P + Y L+ C AL +
Sbjct: 321 PDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSL 380
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++ K P+++ ++LI+GL + + A L + G P+ +T+N +L+ LC
Sbjct: 381 FNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCK 440
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A L L +GL P+ +Y+IL++GY + R E NL EM +PD T
Sbjct: 441 IQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVT 500
Query: 473 YNSYMDGLSNARK 485
YN +DGL + +
Sbjct: 501 YNCLIDGLCKSGR 513
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 132/259 (50%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN+LI+ K KA + M+ +PD+VTFN L+SG+C A LF
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
E G P+V S+N LI G+ + DE +++ +M + VT L+DGLC
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ A EL G P Y +++ LC A+E+ + ++++G P+V +
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
LI G + ++ EA L E+M + ++PDSVT+NCL++ LC GR A L +
Sbjct: 467 NILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHD 526
Query: 429 KGLDPDGMTYHILVSGYTR 447
G D +TY+IL +++
Sbjct: 527 GGPPVDVITYNILFDAFSK 545
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y LI+GF ++ + MV V +V T+NILI C+ A +
Sbjct: 251 PDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDM 310
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M E+G P++V+FNTL+ G+ E + E G + IL+ G C
Sbjct: 311 RNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCK 370
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ +A L + + + P Y L++ LC G A E+ + G P+VI
Sbjct: 371 NNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVIT 430
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+++ L +++ +A L M + G+ P+ ++N L+ C R +A L
Sbjct: 431 YNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMH 490
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ L PD +TY+ L+ G + R L N M D G D+ TYN D S + +
Sbjct: 491 RRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHVI 550
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PSV +N+++ VK + + A+ +M + P +VT +ILI+ +C A +
Sbjct: 76 PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ ++G N ++ T+++G + + + ++ G VT L++GLC
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +A EL+ + V P Y +V+ LC +G A ++ ++ +G P V
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255
Query: 368 CTTLIEGLRRLRKGVEASGLMEKML-------------------KEGIL----------- 397
T LI G L + E + L+ M+ K+G+L
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315
Query: 398 -----PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
PD VTFN L+ C V+A +L + G+ PD +Y+IL+ GY + NR
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E +L N+M + P++ TY+S +DGL + +
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGR 408
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 133/273 (48%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D A+ + R++ P VV FN+++ + K + A+ L ++M +G P++V+ + L
Sbjct: 60 DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + ++ +++ G + +++T ++ GLC G V KA E +G
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
L + Y L+ LC G A E++ ++ + P+V+ +++GL + EA
Sbjct: 180 LLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARD 239
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L ++ GI PD T+ CL+ C +G+ + RL + ++ + TY+IL+
Sbjct: 240 LYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC 299
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ + ++ N M++ G PDL T+N+ M G
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++ G E KAL F+D +V D VT+ LI+G C+ A L +M +
Sbjct: 154 IMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQV 213
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
PNVV +N ++ G + E ++ +++ G + T L+ G C G+ +
Sbjct: 214 VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVT 273
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L+ D R V + Y L++ LC +G G A ++ + + ++G P ++ TL+ G
Sbjct: 274 RLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY 333
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
VEA L + + GI PD ++N L+ C R +A L + K L P+
Sbjct: 334 CLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNI 393
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+TY L+ G + R L + + D G P++ TYN +D L
Sbjct: 394 VTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDAL 438
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 150/300 (50%), Gaps = 1/300 (0%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
V +Y +IN + + +A D V + V+P+ T+ +LI+GFC+ + + A L
Sbjct: 282 VYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 341
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M+ +G N + FNT+I G+ + D+ + + M ++G E T L GLC
Sbjct: 342 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 401
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
R+ +A L+ GV+P Y L+ C +G+ A + E+ +KG PSV+
Sbjct: 402 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 461
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
+I+G + EA ++M K+G +PD T+ L+ C G+ A +L +
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL-SNARKSVR 488
G +P+ + Y L+SG +E R + L ++ML G IPD + Y++ + L ++ RK V+
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVK 581
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 13/325 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRP--SVSI----YNVLINGFVKCREFDKALGFYD 214
V+ K+ R++D R+L+D P VS+ YN L++ +V+ ++ + +
Sbjct: 184 VDGLCKSGRVDDA-------RRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE 236
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++ V T+ IL+ + LF EM+ +V + +I +
Sbjct: 237 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 296
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + G E + T +L++G C G++ A L+ D +GV +
Sbjct: 297 NMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 356
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ C +G AL++ + K G + TL GL R+ + EA L+ M++
Sbjct: 357 TMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G++P+ VT+ L+ C G V+A RL + KG P +TY++++ GYT++ +E
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA 476
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDG 479
E EM +GF+PD+ TY S + G
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHG 501
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 36/255 (14%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ ++ + + ++D L AM K+ + YN L G + D+A
Sbjct: 354 IFNTMIDGYCRKGMVDDALKIKAAMEKM-GVELDIYTYNTLACGLCRVNRLDEAKTLLHI 412
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ V P+ VT+ LIS C++ A LFREM EKG P+VV++N
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN----------- 461
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+++DG +G + +A + ++G +P + Y
Sbjct: 462 ------------------------VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYAS 497
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV C G +AL++ +E+ ++G P+V+A T LI GL + + A L + MLK G
Sbjct: 498 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 557
Query: 396 ILPDSVTFNCLLEDL 410
++PD ++ L+ L
Sbjct: 558 LIPDDSLYSALVGSL 572
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG-VNMAYEMI 287
++++ G C++ + D A L +M G + N + +N+L+ + R+ D+G V E++
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYV--RQKDDGRVQEILEIM 238
Query: 288 E-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
E G E + T ILVD L + K L + V+ + Y ++ C GN
Sbjct: 239 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 298
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A +V+DE G P+ LI G ++ + A L+ M +G+ + + FN +
Sbjct: 299 RRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 358
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
++ C G DA +++ G++ D TY+ L G R NR E + L++ M++ G
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGV 418
Query: 467 IPDLATYNS 475
+P+ TY +
Sbjct: 419 VPNYVTYTT 427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%)
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S + ++VDGLC GRV A L+ D R GV Y L++ + + G E+
Sbjct: 175 VSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEI 234
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + +G +V T L++ L R + L +M ++ D + ++ C
Sbjct: 235 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 294
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A ++ G++P+ TY +L++G+ + + + E L+ +M +G +
Sbjct: 295 AGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQII 354
Query: 473 YNSYMDG 479
+N+ +DG
Sbjct: 355 FNTMIDG 361
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 382 VEASGLMEKMLKEGILPDSVT---FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+A+GL+E+ L G P SV+ + +++ LC GR DA RL G+ + + Y
Sbjct: 158 ADAAGLLERAL--GSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCY 215
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ L+ Y R+ + ++ M +EG + TY +D LS AR
Sbjct: 216 NSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTAR 261
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 197/499 (39%), Gaps = 76/499 (15%)
Query: 29 PSRPETPPVTLPSVTLTPTAHHTHLLR--FLKTHLLTPTNNQITPSSLLHFLKSKLHHHP 86
PSRP+ P H HLLR + HL ++L H
Sbjct: 141 PSRPQQHP-------------HPHLLRCFAVAAHLAVLRGGGGAARAILSRAVRFPSPHR 187
Query: 87 QFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDG 146
F + + ST +F D +F F++ L S+ L IS +P C N
Sbjct: 188 HFVEH------YISTYKTFSSDPASFDFLLLCLPSAPLLRRLRQY--GISPSPEAC-NAV 238
Query: 147 IFSCPEMERI-------------FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY 193
+ P E I ++ + A A R+ D F+ M P V Y
Sbjct: 239 LSRLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMASA----PDVVTY 294
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKP------------------------------ 223
+LI+G E + A+ D MV V+P
Sbjct: 295 GILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQ 354
Query: 224 -----DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
D + ++SGFC A F EM+ KG + V++ T+I G + +E
Sbjct: 355 RKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEE 414
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM + VT +L+DG C G++ +A ++ +RGV P Y L +
Sbjct: 415 AEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTD 474
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC +G+ A E++ E+ KG + +LI GL + +A M M + P
Sbjct: 475 GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKP 534
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+ L++ LC G A L KG+ P +TY++L++G+ R + G+ L+
Sbjct: 535 DVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLL 594
Query: 459 NEMLDEGFIPDLATYNSYM 477
+ ML++ P+ ATYNS M
Sbjct: 595 DWMLEKNIHPNAATYNSLM 613
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 5/317 (1%)
Query: 170 MNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++D L E M RK+I ++Y +++GF + A ++D M R + D VT
Sbjct: 342 ISDALRVVEDMVQRKVILDE---ALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT 398
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ +I+G CR + + A L +EM + + + V++ LI G+ K E M M+
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G + VT L DGLC +G V A EL+ + S +G+ Y L+ LC G
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A+ + ++ P V TTLI+ L + A L+++ML +GI P VT+N L+
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C GR +L K + P+ TY+ L+ Y EN K + M
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638
Query: 468 PDLATYNSYMDGLSNAR 484
P+ TYN + G AR
Sbjct: 639 PNENTYNILIKGHCKAR 655
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y +ING + E ++A M R+ D VT+ +LI G+C+ K A + M
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G PNVV++ L G + + +EM G E ++ T L++GLC G +
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A + D + P + Y L++ LC G+ A ++ E+ KG P+++ L+
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + L++ ML++ I P++ T+N L++ C + ++ +
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
P+ TY+IL+ G+ + KE +EM+ +GF +Y++ + L+ +K V
Sbjct: 639 PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFV 693
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 3/260 (1%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+V ++NIL+ C + A LF EM P+VV++ LI G + + V +
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLL 314
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
EM+ G E ++ +V LC++G + A +V D +R V+ + Y ++ C +
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ A DE+ +KG + TT+I GL R + EA L+++M + D VT+
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
L++ C G+ +A ++ +G+ P+ +TY L G ++ + L++EM +
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 464 EGFIPDLATYNSYMDGLSNA 483
+G + TYNS ++GL A
Sbjct: 495 KGLELNACTYNSLINGLCKA 514
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LING K ++A+ M +KPDV T+ LI C++ D A L +EM
Sbjct: 504 YNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEML 563
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+KG P +V++N L+ GF + + G + M+E ++ T L+ C E +
Sbjct: 564 DKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMK 623
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
E+ R V P + Y L++ C N AL DE+ +KG + + + LI
Sbjct: 624 STTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALI 683
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
L + +K VEA L M KEG+ +S ++
Sbjct: 684 RLLNKKKKFVEARELFHDMRKEGLTAESDVYD 715
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 132/314 (42%), Gaps = 1/314 (0%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E + ++ + K +M + AM + P+V Y L +G K + A
Sbjct: 431 EVTYTVLIDGYCKRGKMAEAFQMHNAMVQR-GVTPNVVTYTALTDGLCKQGDVQAANELL 489
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M ++ + T+N LI+G C+ + A+ +M P+V ++ TLI
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D ++ EM++ G + + VT +L++G C GRV +L+ + + P Y
Sbjct: 550 GDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY 609
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+++ C E N E+ + + P+ LI+G + R EA ++M++
Sbjct: 610 NSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQ 669
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G + +++ L+ L + V+A L +GL + Y + E+ +
Sbjct: 670 KGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLES 729
Query: 454 GENLVNEMLDEGFI 467
L +E+++ +
Sbjct: 730 TLALCDELVEASIV 743
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G+ C + ++ K R+ + M K P+V Y ++++ F K
Sbjct: 338 GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK-KGFAPNVVTYTIVLHSFCKNGM 396
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+D + M + + +N +I C++ + D A+GL +EMR +GCNP++ S+NT
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I + +E +M ++E G + +T ++ L +GR A L + G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
Y GL++ +C +GN +L +++E+ +KG P+ ++ LI L + R+ +A
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ML +G+ PD VT+N L+ LC +G A L + + PD +TY+IL+S +
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636
Query: 446 TRENRRKEGENLVNEML 462
+ + L+N +
Sbjct: 637 CKVRLLDDAAMLLNRAM 653
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 150/292 (51%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V ++N +I G + + +A Y+ M +PD T++IL+ G C+ + A+ L
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
REM +KG PNVV++ ++ F +D+ + EM G +S ++ LC +
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ +A L+ + +G P Y ++ LC A + + L ++G + + I
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T+I L R + +A L ++M+ G D V++N L++ +C G + L +
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG+ P+ ++Y+IL+S +E R ++ L +ML++G PD+ TYN+ ++GL
Sbjct: 550 KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 151 PEMERI-FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
PE+ + F+ + + ++ + +E M L +P Y++L++G K A
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSA 365
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M + P+VVT+ I++ FC+N +D L EM KG N +N +I
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + DE + + EM GC + ++ LCN ++ +A + + GV+
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ L +G A+ + E+ G V++ LI+ + + + L+E
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M ++GI P++V++N L+ +LC R DA L +GL PD +TY+ L++G +
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 450 RRKEGENLVNEMLDEGFIPDLATYN 474
NL+ ++ +E PD+ TYN
Sbjct: 606 WMHAALNLLEKLHNENVHPDIITYN 630
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ L RL + EA L+ M + G +PD+V + ++ LCD G +A L
Sbjct: 173 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G D T+ +V G R +E LV+ M+ +G +P + TY + GL
Sbjct: 233 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292
Query: 483 ARKS 486
R++
Sbjct: 293 VRQA 296
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 174/386 (45%), Gaps = 13/386 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA F+H ++ ++ +L + + + + N +S GI S
Sbjct: 143 FRWAEKQKGFKHTTESYNLLIEALG---KIKQFNVIWNLVS----DMKRKGILS----RE 191
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + +A ++ + + +FE M K + VS +N L++ K R KA +D+
Sbjct: 192 TFALITRRYARARKVKEAVESFEKMEKF-GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDK 250
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R KPD+ ++ IL+ G+ +++ ++REMR++G P+VV+F LI RK
Sbjct: 251 MKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARK 310
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+DE + + +EM + S L++GL +E R+ +A E G P+ Y
Sbjct: 311 YDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNA 370
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE- 394
+V C A +VDE+ K G P+ ++ L + RK EA + ++M +E
Sbjct: 371 VVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREP 430
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P T++ ++ C+ R A ++ KG+ P + L++ E++ ++
Sbjct: 431 GCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDA 490
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
EMLD G P +++ L
Sbjct: 491 CTYFQEMLDVGIRPPATMFSNLKQAL 516
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 4/280 (1%)
Query: 209 ALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
AL F+ + + K ++N+LI + K+F++ L +M+ KG + +F +
Sbjct: 139 ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALIT 197
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
R + RK E V +M + G + L+D LC V KA E V D + G
Sbjct: 198 RRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQE-VFDKMKHGRF 256
Query: 328 PKDFDYFGLVEKLCGEGNAGIAL-EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
D + ++ + G+ + L EV E+ +G P V+ LI + RK EA
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIR 316
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L +M + I P F L+ L R +A G P+ TY+ +V Y
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYC 376
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +V+EM G P+ TY+ + L RKS
Sbjct: 377 WSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKS 416
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 243 LALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
LAL FR ++KG S+N LI ++F+ N+ +M G S T ++
Sbjct: 138 LALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALI 196
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+V +A E + G D+ L++ LC N A EV D++
Sbjct: 197 TRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRF 256
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P + + T L+EG + + ++ + + +M EG PD VTF L+ C + +A R
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIR 316
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
L K + P + L++G E R KE ++ GF P+ TYN+
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNA 370
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F +N R+ + L FE + KL P YN ++ + + A D
Sbjct: 332 VFCTLINGLGSEKRLKEALEFFEQL-KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDE 390
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGER 274
M + V P+ T++I++ + +K A +F+ M RE GC P + +++ +IR F E
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D + + EM G L++ LC+E ++ AC + G+ P +
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFS 510
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
L + L +G AL + +++ K P V
Sbjct: 511 NLKQALLDDGRKDTALLMAEKIXKLRKAPLV 541
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R + ++ +K + + F+ M + P++S Y+++I F D A+ +D
Sbjct: 401 RTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWD 460
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M V P + F+ LI+ C K + A F+EM + G P F+ L + +
Sbjct: 461 EMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDG 520
Query: 275 KFDEGVNMAYEMIEL 289
+ D + MA ++ +L
Sbjct: 521 RKDTALLMAEKIXKL 535
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 175/365 (47%), Gaps = 39/365 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N K R ++ L +E M+K + + Y+ LI G D A+ Y M
Sbjct: 258 YNVMINGLCKMGRFDESLEMWERMKK-NECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ V DVVT+N L++GFCR K + L+ M ++ C+ NVVS+N IRG F RK
Sbjct: 317 VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKV 375
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E +++ + G S T +L+ GLC G + KA +++ + G F Y +
Sbjct: 376 EEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSI 435
Query: 337 VEKLCGEGNAGIALEVVDELWK-----------------------------------KGN 361
V+ L +G AL +V ++ K KG
Sbjct: 436 VDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD-AD 420
P+V++ TLI GL + + +A +++ML++ PD +T++ L++ LC G+ +D A
Sbjct: 496 SPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQ-GKKIDMAL 554
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L KGL+PD ++IL+ G + ++ L + M +P+L T+N+ MDGL
Sbjct: 555 NLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL 614
Query: 481 SNARK 485
AR+
Sbjct: 615 YKARE 619
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 182/423 (43%), Gaps = 47/423 (11%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+F AS + H FL I+R L+ + ++ I C C+ D + +
Sbjct: 29 LFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLT----- 83
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGF-------------- 200
+ A+ K+ N+ L F+ M ++ +P + YN L+N F
Sbjct: 84 -----VLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLA 138
Query: 201 ---------------------VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
VK R+F +A G D M +KPDV ++ +I+G ++
Sbjct: 139 YFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSG 198
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF-SSVTC 298
AL +F EM E+G P+V+ +N +I GFF + +G + +++ C + + VT
Sbjct: 199 DLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTY 258
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
++++GLC GR ++ E+ + F Y L+ LC GN A+EV E+ K
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+ + V+ L+ G R K E+ L M KE + V++N + L + + +
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEE 377
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A + L +G D TY +L+ G + + ++ E D G D Y+S +D
Sbjct: 378 AISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVD 437
Query: 479 GLS 481
GLS
Sbjct: 438 GLS 440
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 40/363 (11%)
Query: 160 AVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+N VK+ + L F+ M R L+ P V YN++I+GF K ++ + ++R+V
Sbjct: 190 VINGMVKSGDLVSALEVFDEMFERGLV---PDVMCYNIMIDGFFKRGDYVQGKEIWERLV 246
Query: 218 RDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V P+VVT+N++I+G C+ +FD +L ++ M++ C ++ ++++LI G
Sbjct: 247 KGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNV 306
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL-----------VIDFS--- 322
D V + EM++ VT L++G C G++ ++ EL V+ ++
Sbjct: 307 DGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFI 366
Query: 323 --------------------RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
RRG Y L+ LC G+ AL+++ E G+
Sbjct: 367 RGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDK 426
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
A +++++GL + + EA G++ +M K G N L+ + +A
Sbjct: 427 LDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICF 486
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
TKG P ++Y+ L++G + R + + V EML++ + PD+ TY+ MDGL
Sbjct: 487 FREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQ 546
Query: 483 ARK 485
+K
Sbjct: 547 GKK 549
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 2/269 (0%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +++ DG + Y+ +++G K D+ALG +M + + N LI+
Sbjct: 413 ALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLIN 472
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
GF R K + A+ FREM KGC+P VVS+NTLI G +F + + EM+E +
Sbjct: 473 GFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKP 532
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+T +L+DGLC ++ A L +G+ P + L+ LC G AL +
Sbjct: 533 DMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLY 592
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+ + LP+++ TL++GL + R+ AS + M K G PD +++N L+ LC
Sbjct: 593 SNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSC 652
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILV 442
GR D L A G+ P +T++ILV
Sbjct: 653 GRISDGIALFDDALKNGILPTSITWYILV 681
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 153/324 (47%), Gaps = 2/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F +A ++ + + M K + +V YN+ I G + R+ ++A+ ++ +
Sbjct: 328 YNALLNGFCRAGKIKESFELWVMMGK--ENCHNVVSYNIFIRGLFENRKVEEAISVWELL 385
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R D T+ +LI G C+N + AL + +E ++ G + ++++++ G + +
Sbjct: 386 RRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRV 445
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + + ++M + GCE S C L++G ++ +A + +G P Y L
Sbjct: 446 DEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTL 505
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A V E+ +K P +I + L++GL + +K A L ++L +G+
Sbjct: 506 INGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD N L+ LC G+ DA L P+ +T++ L+ G + +
Sbjct: 566 EPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASV 625
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ M GF PD+ +YN + GL
Sbjct: 626 IWACMFKNGFQPDIISYNITLKGL 649
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N FV+A+++ + + F M P+V YN LING K F A F M+
Sbjct: 471 INGFVRASKLEEAICFFREMETK-GCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKD 529
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KPD++T+++L+ G C+ KK D+AL L+R++ KG P+V N L+ G K ++ +
Sbjct: 530 WKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDAL 589
Query: 281 NMAYEMIELGCEFSSVTCEILVDGL-----CNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ M + C + VT L+DGL C V+ AC + G P Y
Sbjct: 590 LLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMF-----KNGFQPDIISYNI 644
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
++ LC G + + D+ K G LP+ I L+ + +L
Sbjct: 645 TLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKL 687
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ K R+++ L M K S + N LINGFV+ + ++A+ F+ M
Sbjct: 436 VDGLSKQGRVDEALGIVHQMDKY-GCELSPHVCNPLINGFVRASKLEEAICFFREMETKG 494
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P VV++N LI+G C+ ++F A +EM EK P++++++ L+ G +K D +
Sbjct: 495 CSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMAL 554
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ +++ G E IL+ GLC+ G++ A L + + LP + L++ L
Sbjct: 555 NLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL 614
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+A + ++K G P +I+ ++GL + + L + LK GILP S
Sbjct: 615 YKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTS 674
Query: 401 VTFNCLLEDLCDVG 414
+T+ L+ + +G
Sbjct: 675 ITWYILVRAVLKLG 688
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 174/386 (45%), Gaps = 13/386 (3%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER 155
F WA F+H ++ ++ +L + + + + N +S GI S
Sbjct: 143 FRWAEKQKGFKHTTESYNLLIEALG---KIKQFNVIWNLVS----DMKRKGILS----RE 191
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + +A ++ + + +FE M K + VS +N L++ K R KA +D+
Sbjct: 192 TFALITRRYARARKVKEAVESFEKMEKF-GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDK 250
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R KPD+ ++ IL+ G+ +++ ++REMR++G P+VV+F LI RK
Sbjct: 251 MKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARK 310
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+DE + + +EM + S L++GL +E R+ +A E G P+ Y
Sbjct: 311 YDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNA 370
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE- 394
+V C A +VDE+ K G P+ ++ L + RK EA + ++M +E
Sbjct: 371 VVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREP 430
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G P T++ ++ C+ R A ++ KG+ P + L++ E++ ++
Sbjct: 431 GCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDA 490
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
EMLD G P +++ L
Sbjct: 491 CTYFQEMLDVGIRPPATMFSNLKQAL 516
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 117/280 (41%), Gaps = 4/280 (1%)
Query: 209 ALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
AL F+ + + K ++N+LI + K+F++ L +M+ KG + +F +
Sbjct: 139 ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALIT 197
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
R + RK E V +M + G + L+D LC V KA E V D + G
Sbjct: 198 RRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQE-VFDKMKHGRF 256
Query: 328 PKDFDYFGLVEKLCGEGNAGIAL-EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
D + ++ + G+ + L EV E+ +G P V+ LI + RK EA
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIR 316
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L +M + I P F L+ L R +A G P+ TY+ +V Y
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYC 376
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +V+EM G P+ TY+ + L RKS
Sbjct: 377 WSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKS 416
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 243 LALGLFREM-REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
LAL FR ++KG S+N LI ++F+ N+ +M G S T ++
Sbjct: 138 LALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGI-LSRETFALI 196
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+V +A E + G D+ L++ LC N A EV D++
Sbjct: 197 TRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRF 256
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P + + T L+EG + + ++ + + +M EG PD VTF L+ C + +A R
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIR 316
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
L K + P + L++G E R KE ++ GF P+ TYN+
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNA 370
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F +N R+ + L FE + KL P YN ++ + + A D
Sbjct: 332 VFCTLINGLGSEKRLKEALEFFEQL-KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDE 390
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGER 274
M + V P+ T++I++ + +K A +F+ M RE GC P + +++ +IR F E
Sbjct: 391 MRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEE 450
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D + + EM G L++ LC+E ++ AC + G+ P +
Sbjct: 451 RVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFS 510
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
L + L +G AL + +++ K P V
Sbjct: 511 NLKQALLDDGRKDTALLMAEKIKKLRKAPLV 541
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R + ++ +K + + F+ M + P++S Y+++I F D A+ +D
Sbjct: 401 RTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWD 460
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M V P + F+ LI+ C K + A F+EM + G P F+ L + +
Sbjct: 461 EMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDG 520
Query: 275 KFDEGVNMAYEMIEL 289
+ D + MA ++ +L
Sbjct: 521 RKDTALLMAEKIKKL 535
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 14/313 (4%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
AV+ F + R +DG + P++ Y +LI + D +++
Sbjct: 79 AVSGFNRMARSSDGAVT-----------PTLHTYGILIGCCCRAGRLDLGFAGLGNVIKK 127
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGL-FREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ + + F L+ C K+ A+ + R M E GC P+V S+N L++G E + E
Sbjct: 128 GYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQE 187
Query: 279 GVNMAYEMIELG--CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + M + G C V+ ++DGL EG KA + RG+LP Y +
Sbjct: 188 ALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTI 247
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V LC A++V++ + K G +P I +++ G + EA G++EKM +G+
Sbjct: 248 VAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGV 307
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD+VT+ L++ LC GR ++A ++ +GL P+ +TY L+ GY + E +
Sbjct: 308 EPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRD 367
Query: 457 LVNEMLDEGFIPD 469
L++ M+ G PD
Sbjct: 368 LLDLMVRNGIQPD 380
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 13/372 (3%)
Query: 117 RSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLA 176
R+LA+ R S +V F N S+DG + P + + + +A R++ L
Sbjct: 66 RALAAVARDSPAAAVSGF---NRMARSSDGAVT-PTLH-TYGILIGCCCRAGRLD---LG 117
Query: 177 FEAMRKLIDGRPSVS--IYNVLINGFVKCREFDKALGFY-DRMVRDRVKPDVVTFNILIS 233
F + +I V I+ L+ + A+ RM P V ++NIL+
Sbjct: 118 FAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLK 177
Query: 234 GFCRNKKFDLALGLFREMREKG--CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
G C + AL L M + G C P+VVS++T+I G F E D+ + +EM+E G
Sbjct: 178 GLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGI 237
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
VT +V LC + KA +++ + GV+P Y +V C G + A+
Sbjct: 238 LPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIG 297
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
+++++ G P + T+L++ L + + +EA +++ M+K G+ P+ +T++ LL
Sbjct: 298 ILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYA 357
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
G V+ L L G+ PD + IL+ T+ + ++M + PD+
Sbjct: 358 TKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVV 417
Query: 472 TYNSYMDGLSNA 483
TY + +DGL +
Sbjct: 418 TYGTLIDGLCKS 429
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 8/268 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRD--RVKPDVVTFNILISGFCRNKKFDLAL 245
P V YN+L+ G +AL M D PDVV+++ +I G + D A
Sbjct: 167 PHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAY 226
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ EM E+G P+VV++NT++ + D+ +++ M++ G +T +V G
Sbjct: 227 STYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGY 286
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C+ G+ +A ++ GV P Y L++ LC G A +++D + K+G P+V
Sbjct: 287 CSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNV 346
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
I +TL+ G VE L++ M++ GI PD F+ L+ C + + D +
Sbjct: 347 ITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILI---CACTKHQNVDVAMFV 403
Query: 426 AS---TKGLDPDGMTYHILVSGYTRENR 450
S + L PD +TY L+ G + R
Sbjct: 404 FSKMRQQRLTPDVVTYGTLIDGLCKSGR 431
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 117/235 (49%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y+ +I+G K + DKA Y M+ + PDVVT+N +++ C+ + D A
Sbjct: 201 DCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKA 260
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ + M + G P+ +++N+++ G+ + E + + +M G E +VT L+D
Sbjct: 261 MDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDY 320
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GR ++A +++ +RG+ P Y L+ +G +++D + + G P
Sbjct: 321 LCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPD 380
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ LI + + A + KM ++ + PD VT+ L++ LC GR DA
Sbjct: 381 RHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ V A KA M+ + M K +G P YN +++G+ + +A+G ++
Sbjct: 244 YNTIVAALCKAQAMDKAMDVLNRMVK--NGVMPDCITYNSIVHGYCSSGQSKEAIGILEK 301
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D V+PD VT+ L+ C+N + A + M ++G PNV++++TL+ G+ +
Sbjct: 302 MCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGA 361
Query: 276 FDEGVNMAYEMIELGCE-----FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E ++ M+ G + FS + C C + + + V R+ L D
Sbjct: 362 LVEMRDLLDLMVRNGIQPDRHVFSILICA------CTKHQNVDVAMFVFSKMRQQRLTPD 415
Query: 331 FDYFG-LVEKLCGEGNAGIAL 350
+G L++ LC G A+
Sbjct: 416 VVTYGTLIDGLCKSGRVDDAM 436
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 108/284 (38%), Gaps = 76/284 (26%)
Query: 209 ALGFYDRMVRDR---VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
A+ ++RM R V P + T+ ILI CR + DL + +KG + F
Sbjct: 79 AVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTP 138
Query: 266 LIRGFFGERKFDEGVNMAYE-MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L++ E++ +N+ M EL
Sbjct: 139 LLKSLCAEKRTSNAMNIVLRRMTEL----------------------------------- 163
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN--LPSVIACTTLIEGLRRLRKGV 382
G P F Y L++ LC E + ALE++ + G P V++ +T+I+GL +
Sbjct: 164 GCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSD 223
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A +ML+ GILPD V TY+ +V
Sbjct: 224 KAYSTYHEMLERGILPDVV-----------------------------------TYNTIV 248
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ + + +++N M+ G +PD TYNS + G ++ +S
Sbjct: 249 AALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQS 292
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 4/323 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE--FDKALGFYDRMVR 218
++A K R N+ F++M L +P + Y+ +++G+ + ++ M+
Sbjct: 337 IHALFKHGRTNEAKCIFDSM-VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 395
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+ FNILI+ + R D A+ +F +M+ KG P+ V+F T+I + D+
Sbjct: 396 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 455
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF-GLV 337
++ M+++G S L+ G CN G ++KA EL+ + + + P YF ++
Sbjct: 456 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 515
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC EG +++D + + G P+V+ +L+EG + EA L++ M GI
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 575
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ + L++ C GR DA + KG+ P + Y I++ G + R + +
Sbjct: 576 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 635
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
+EM++ G + TY + GL
Sbjct: 636 FHEMIESGTTVSIHTYGVVLGGL 658
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 156/358 (43%), Gaps = 41/358 (11%)
Query: 161 VNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ FVK ++ L E M + + P + I N +I K +E DKA +MV
Sbjct: 197 IYGFVKDGEVDKAHCLFLEMMEQGV--LPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD+ T++++I G C++K D A + +M E G PN +++N+LI G+ ++E
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA-CEL-----------VIDFS----- 322
V + +M G + C + L GR +A C +I +S
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374
Query: 323 --------------------RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+G+ P + L+ G A+ + +++ KG +
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 434
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P + T+I L R+ + +A M+ G+ P + CL++ C+ G V A L
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 494
Query: 423 RLLASTKGLDPDGMTY-HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K + P G+ Y +++ +E R EG+++++ M+ G P++ T+NS M+G
Sbjct: 495 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 552
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 3/295 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN+LI+ + + D L R++++ + PD +++ LI GF ++ + D A L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P ++ N++I+ ++ D+ ++ +M++ G T +++DGLC
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA ++ G P Y L+ G ++ V ++ G +P+V
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL--L 425
C + I L + + EA + + M+ +G PD ++++ +L + AD + L
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG+ P+ ++IL++ Y R + + +M ++G IPD T+ + + L
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 447
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +++ + R++D L F M I PS ++Y LI G E KA M
Sbjct: 440 FATVISSLCRIGRLDDALHKFNHMVD-IGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 498
Query: 217 V-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +D P V F+ +I+ C+ + + M + G PNVV+FN+L+ G+
Sbjct: 499 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 558
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M +G E + LVDG C GR+ A + D +GV P Y
Sbjct: 559 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 618
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ L A ++ E+ + G S+ ++ GL R EA+ L+EK+
Sbjct: 619 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 678
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +TFN ++ + VGR +A L ST GL P+ TY ++++ +E +E +
Sbjct: 679 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD 738
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
NL + G D N + L N + + +
Sbjct: 739 NLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 773
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI GFVK E DKA + M+ V P ++ N +I C+ K+ D A + ++M + G
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P++ +++ +I G + D+ + +M+E G +S+T L+ G G ++
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ S GV+P + + L G A + D + KG P +I+ +T++ G
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375
Query: 376 RRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+ + ML +GI P+ FN L+ G A + KG+ P
Sbjct: 376 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 435
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
D +T+ ++S R R + + N M+D G P A Y + G N + V+
Sbjct: 436 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 490
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 158/387 (40%), Gaps = 75/387 (19%)
Query: 180 MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
++K++D P + Y+++I+G K + DKA ++MV +P+ +T+N LI G+
Sbjct: 248 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307
Query: 238 NKKFDLALGLFREMRE-----------------------------------KGCNPNVVS 262
+ ++ ++ +F++M KG P+++S
Sbjct: 308 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 367
Query: 263 FNTLIRGFFGERK-------------------------------------FDEGVNMAYE 285
++T++ G+ D+ + + +
Sbjct: 368 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M G +VT ++ LC GR+ A GV P + Y L++ C G
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487
Query: 346 AGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A E++ E+ K P V +++I L + + E +M+ M++ G P+ VTFN
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 547
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+E C VG +A L ++ G++P+ Y LV GY + R + + +ML +
Sbjct: 548 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 607
Query: 465 GFIPDLATYNSYMDGLSNARKSVRQTR 491
G P Y+ + GL AR++ +
Sbjct: 608 GVKPTSVLYSIILHGLFQARRTTAAKK 634
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 1/302 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P + F +N K R+ +G + M + RP+V +N L+ G+ ++A
Sbjct: 505 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ-TGQRPNVVTFNSLMEGYCLVGNMEEAF 563
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
D M ++P+ + L+ G+C+N + D AL +FR+M KG P V ++ ++ G
Sbjct: 564 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 623
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F R+ M +EMIE G S T +++ GLC +A L+ V
Sbjct: 624 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 683
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ ++ + G A E+ D + G +P++ + +I L + EA L
Sbjct: 684 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 743
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ K G DS N ++ L + A + L + T +L S ++RE
Sbjct: 744 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGM 803
Query: 451 RK 452
K
Sbjct: 804 IK 805
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ L +V L K G P + +LI G + + +A L +M+++G+LP + N ++
Sbjct: 174 LGLAIVGRLLKNGLGPDDFS-YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSII 232
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
++LC + A+ + G+ PD TY +++ G + + E ++ +M++ G
Sbjct: 233 KELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTR 292
Query: 468 PDLATYNSYMDGLS 481
P+ TYNS + G S
Sbjct: 293 PNSITYNSLIHGYS 306
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + ++I+ +VSI Y V++ G + D+A +++ VK D++TFNI+IS
Sbjct: 632 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 691
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+ + A LF + G PN+ +++ +I E ++E N+ + + G
Sbjct: 692 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 751
Query: 294 SSVTCEILVDGLCNEGRVLKAC---------ELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
S +V L N+ V KA L ++ S +L F G+++ L G
Sbjct: 752 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTA 811
Query: 345 NA 346
A
Sbjct: 812 PA 813
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 196/428 (45%), Gaps = 43/428 (10%)
Query: 68 QITPSSLLHFLKSKLHHHPQ----FTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSY 123
Q TP + LK H P+ F H ++H ++A + SF H ++ +
Sbjct: 75 QFTPELVDKVLKRLWFHGPKALQFFKHLEYHP-SYAHSASSFDH----------AIDIAG 123
Query: 124 RFSELHSVLNFISANPC----PCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
R + +V ++ P S + F FV A + + + F +
Sbjct: 124 RMRDYKTVWALVARMRARRIGPSS-----------KTFAIIAERFVAAGKPDRAIKVFLS 172
Query: 180 MRKLIDGRPS-VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN 238
MR+ G P + +N +++ K + + A +++R + K DVV++NI+ +G+C
Sbjct: 173 MRE--HGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLI 230
Query: 239 KKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTC 298
K+ AL + +EM E+G P + ++N L++G+F + E +M E E VT
Sbjct: 231 KRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTY 290
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
+V G G + +A ++ + G+LP Y +++ LC + + A+ + +E+ K
Sbjct: 291 TTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVK 350
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG +P++ +I GL +A +E+M +G P+ T+N + CD G V+
Sbjct: 351 KGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAG-DVE 409
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN------EMLDEGFIPDLAT 472
+G P+ TY++L+S RK+ E+LV EM+D GFIP T
Sbjct: 410 KGLSMFEKMGQGSLPNLDTYNVLISAMF---VRKKSEDLVVAGKLLLEMVDRGFIPRKFT 466
Query: 473 YNSYMDGL 480
+N ++GL
Sbjct: 467 FNRVLNGL 474
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 35/295 (11%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S S ++ I+ + R++ RM R+ P TF I+ F K D A+ +F
Sbjct: 111 SASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVF 170
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
MRE GC ++ SFNT++ ++ + N ++++ + V+ I+ +G C
Sbjct: 171 LSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLI 230
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
R PK ALEV+ E+ ++G P++
Sbjct: 231 KRT----------------PK-------------------ALEVLKEMVERGLTPTITTY 255
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L++G R + EA +M + + D VT+ ++ VG A ++
Sbjct: 256 NILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVG 315
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+G+ P TY+ ++ +++ + + EM+ +G++P+L TYN + GL +A
Sbjct: 316 EGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHA 370
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 38/244 (15%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + +A ++ + F M++ + V Y +++GF E +A ++ M
Sbjct: 255 YNILLKGYFRAGQLKEAWEFFLQMKER-EVEIDVVTYTTMVHGFGVVGEIKRARKVFNEM 313
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V + + P T+N +I C+ + A+ +F EM +KG PN+ ++N +IRG F
Sbjct: 314 VGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNM 373
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK----------------------- 313
D+ + M GCE + T + + C+ G V K
Sbjct: 374 DKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLPNLDTYNVLI 433
Query: 314 --------------ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
A +L+++ RG +P+ F + ++ L GN A E++ K
Sbjct: 434 SAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKC 493
Query: 360 GNLP 363
G LP
Sbjct: 494 GRLP 497
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 149/298 (50%), Gaps = 3/298 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG- 246
P+ Y +L++ + + AL F+ +++R ++ D++ N L+ GFC K+ D AL
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDG 304
L E GC P+V S++ L++ + K + ++ M E G C V ++DG
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
EG V KAC+L + +RG+ P Y +V LC A + ++ KG LP+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
LI G + EA + ++M ++ ILPD VTFN L+ LC G+ +A +
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ KG +PD +Y+I+++GY + + +L + ML +G P + T+N + +N
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 171/368 (46%), Gaps = 40/368 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
+ V+A KA M D AF +R++++ P+ YN LI G+ ++ +A+ +
Sbjct: 257 YSSVVHALCKARAM-DKAEAF--LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS------------ 262
M R + PDVVTFN+L+ C+ K A +F M KG NP+V S
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373
Query: 263 -----------------------FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
FN LI+ + D+ + + EM + G + + +T
Sbjct: 374 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
++ LC G++ A E +GV P + Y L++ C G+ A E++ E+
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G ++ +++I L +L + ++A + + + G+ P +V ++ L++ C VG+ A
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R+ + G++P+ + Y LV+GY + R EG +L EML +G P YN +DG
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613
Query: 480 LSNARKSV 487
L A ++V
Sbjct: 614 LFEAGRTV 621
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 3/297 (1%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALG-FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
R + I N L+ GF + + D+AL R PDV +++IL+ C K A
Sbjct: 143 RVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQAD 202
Query: 246 GLFREMREKG--CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
L R M E G C+P+VV++NT+I GFF E ++ ++ EM++ G VT +V
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
LC + KA + +GVLP ++ Y L+ G A+ V E+ ++ LP
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 322
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
V+ L+ L + K EA + + M +G PD ++N +L G VD L
Sbjct: 323 DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L G+ P T+++L+ Y + + NEM D G P++ TY + + L
Sbjct: 383 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 148/326 (45%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A+ ++ ++ F MR +P+V Y +I + + D A+ +++M
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ V PD ++ LI GFC + A L E+ G + ++V F+++I +
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ N+ + +G ++V +L+DG C G++ KA + G+ P D Y L
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V C G L + E+ +KG PS I +I+GL + V A +M + GI
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP--DGMTYHILVSGYTRENRRKEG 454
+ T++ +L L R D + + L + ++ D +T + +++G + R +E
Sbjct: 636 AMNKCTYSIVLRGLFK-NRCFD-EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 693
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
++L + G +P + TY+ + L
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNL 719
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 144/330 (43%), Gaps = 5/330 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ A + +M+D A E ++ID P Y+ LI GF KA ++
Sbjct: 436 IAALCRIGKMDD---AMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ + D+V F+ +I+ C+ + A +F G +P V ++ L+ G+ K ++
Sbjct: 493 NGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + M+ G E + V LV+G C GR+ + L + ++G+ P Y +++
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
L G A E+ + G + + ++ GL + R EA L +++ +
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKI 672
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D +T N ++ + R +A L S GL P +TY I+++ +E +E E++
Sbjct: 673 DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMF 732
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ M + G PD N + L + VR
Sbjct: 733 SSMQNAGCEPDSRLLNHVVRELLKKNEIVR 762
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ + +M L F+AM P+ +Y L+NG+ K D+ L +
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVS-AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +KP + +NI+I G + A F EM E G N +++ ++RG F R
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 654
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
FDE + + E+ + + +T ++ G+ RV +A +L SR G++P Y
Sbjct: 655 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSI 714
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
++ L EG A ++ + G P ++ L + + V A + K+
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN L+NG V + A ++ M ++ PD VT+NI+I G+C+ K A+
Sbjct: 216 PSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEK 275
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FR+M K P+ +++ TLI+ + ER FD +++ EM E G E + +++ GLC
Sbjct: 276 FRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCK 335
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + ++A + +++G N I ++D K G++
Sbjct: 336 QRKCMEAYAVFETMNQKGC----------------RANVAIYTALIDSYSKNGSME---- 375
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
EA L E+M EG PD+VT++ L+ LC GR D L
Sbjct: 376 ---------------EAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 420
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ + M Y L+ G + R ++ ENL EM ++G D YN+ +D L+ K
Sbjct: 421 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 478
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 7/338 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++F VN V + + FE M DG P YN++I G+ K + KA+ +
Sbjct: 221 YNFLVNGLVNSMFIESAEKVFEVM----DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKF 276
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M VKPD +T+ LI + FD L L+ EM E+G S++ +I G +
Sbjct: 277 RDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQ 336
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
RK E + M + GC + L+D G + +A L G P Y
Sbjct: 337 RKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTY 396
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV LC G +E+ D KG + + +LI+GL + + +A L E+M +
Sbjct: 397 SVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSE 456
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G DS +N +++ L G+ A L +G D T+ IL+ G +E++ +E
Sbjct: 457 KGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEE 516
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++M+D+G P +A++ + GL K R +
Sbjct: 517 AIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACK 554
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + K + + FE M + R +V+IY LI+ + K ++A+ ++RM
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMNQK-GCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +PD VT+++L++G C++ + D + LF R KG N + + +LI G +
Sbjct: 385 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 444
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ N+ EM E GC S ++D L G++ +A L G + + L
Sbjct: 445 EDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTIL 504
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L E A++ D++ KG P+V + L GL K A +++ + GI
Sbjct: 505 IDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGI 564
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+P++ F ++ LC R +A +L +G + G +L++
Sbjct: 565 IPET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINA 611
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+++I G K R+ +A ++ M + + +V + LI + +N + A+ LF M+
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G P+ V+++ L+ G + D+G+ + G +++ L+DGL GR+
Sbjct: 386 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 445
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L + S +G + Y +++ L G AL + + ++G +V T LI
Sbjct: 446 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 505
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + K EA +KM+ +GI P +F L LC G+ A ++ + G+
Sbjct: 506 DGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGII 565
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
P+ + +++ + R KE L + ++D G
Sbjct: 566 PE-TAFEDMINTLCKAQRIKEACKLADGIVDRG 597
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L++ P+V Y LI+ + K + + AL YD M + PDVVT+ +++G C++ K +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A +FREM E G PN S+ TLI F E E + M+ G F V L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGL G A ++ ++P Y L++ C G+ ++ E+ +K
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259
Query: 363 PSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVG-RTVDA 419
P+VI +++++G +KG+ EA +M KM++ ILP+ + L++ R +
Sbjct: 260 PNVIVYSSIVDGYT--KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D + + S +GL+ + V+ R R +E + L +M+ G +PD Y S MDG
Sbjct: 318 DLFKEMKS-RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 480 LSNARK 485
A K
Sbjct: 377 FFKAGK 382
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 150/299 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R SV +NVLI+G+ + E +A+ + M + PD+VT+N L++GFC+ A
Sbjct: 14 RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L E+ PNV+++ TLI + + ++ + M EM VT +++GLC
Sbjct: 74 LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+V +A + + GV+P F Y L++ L EGN A + + +G V+
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T L++GL + A + + +L+E ++P+ VT++ L++ C +G + L
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K + P+ + Y +V GYT++ E +++ +M+ +P++ Y + +DG A +
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+ LI+G K + +K M + P+V+ ++ ++ G+ + + A+ +
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M ++ PNV + TLI G+F + +++ EM G E ++ + V+ L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A EL D RG+LP +Y +++ G A + E+ +K + V+A
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI GL +L K E+ M + G+ PDS TFN ++ C G +A +L
Sbjct: 405 YNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ GL P+ +T +ILV ++ +L+N+ML GF P T+ + +D S +R++
Sbjct: 464 SYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 158/340 (46%), Gaps = 13/340 (3%)
Query: 158 HFAVNAFV----KANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
+F +++FV ++ RM + F+ M R L+ R + Y +++GF K + A
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN---YTSMMDGFFKAGKESDAFN 388
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
M DVV +N+LI+G + K++ + MR+ G P+ +FNT+I +
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYC 447
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + + EM G + +S+TC ILV LC G + K +L+ D G P
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ A + L D+L G + TLI RL A+ + + M
Sbjct: 508 THKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +GIL D +T+N L+ C A + T+G+ P+ TY+IL+ G +
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG---LSNARKSVR 488
KE LVN+M + G +P+ TY+ + G + N ++ V+
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVK 667
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 145/325 (44%), Gaps = 2/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F KA + +D + M + G V+ YNVLING K +++ F+ M +
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVA-YNVLINGLFKLGKYESE-SFHTGMRQLG 431
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD TFN +I+ +C+ AL L EM+ G PN ++ N L++ + ++ +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M+ +G + T + ++D R GV Y L+
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTF 551
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A V ++ KG L +I LI G +A + +ML EG+ P+
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL L +A L +GL P+ TY ILVSG+ + KE L E
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +GF+P TYN + + +K
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKK 696
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +IN + K AL + M +KP+ +T NIL+ C + + + L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G +P + ++ R+ D ++ +++ +G + T L+ C
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCR 553
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + D +G+L Y L+ C + A V ++ +G P+V
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ GL R EA+GL+ +M + G++P++ T++ L+ +G + +L
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMI 673
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
TKG P TY++L+S + + + + + L+ EM G P+ +TY+
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYD 720
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 20/279 (7%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+S YN LI+ F + +A + M+ + D++T+N LI G+C + A +
Sbjct: 541 LSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHS 600
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M +G +PNV ++N L+ G R E + +M E G ++ T +ILV G G
Sbjct: 601 QMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+ + +L + +G +PK Y L+ A E++ E+ +G P+
Sbjct: 661 NMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYD 720
Query: 370 TLIEGLRRLRK------------GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
LI G +L K EA L E+M ++G +P T C+ L G+
Sbjct: 721 ILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKA 780
Query: 418 DADR-LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
DA R L L K T L++G E+R ++G+
Sbjct: 781 DAQRILNKLYKKK-------TVQELLAGVLWESRERKGK 812
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + Y++L++G K + + Y M+ P T+N+LIS F + KK A L
Sbjct: 644 PNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 248 FREMREKGCNPNVVSFNTLIRGFF 271
+EM+ +G PN +++ LI G++
Sbjct: 704 MQEMQVRGIPPNSSTYDILICGWY 727
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 165/403 (40%), Gaps = 73/403 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +NAF M + F+ M++ P+V YN L+NG+VK R+ +A Y+ M
Sbjct: 222 FGTVINAFCNQGNMMEARNLFDGMKE-AGHIPNVVCYNTLMNGYVKARDIGQANMLYEEM 280
Query: 217 VRDRVKPDVVTFNILI-----------------------------------SGFCRNKKF 241
V PD TFNIL+ SG C
Sbjct: 281 KSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWL 340
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGF------------------FGE---------- 273
D A+ +M EKG P VV+FN++I + FG
Sbjct: 341 DEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSL 400
Query: 274 -------RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ E ++ YEMI G + +L+DG G V A L + RG+
Sbjct: 401 IMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGI 460
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + + L G A +V ++ KKG +P+ +LI G + EA
Sbjct: 461 HPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALM 520
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGY 445
L +M ++G+LPD T N ++ LC GR A D R + T GL PD +TY+ L+ GY
Sbjct: 521 LEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT-GLIPDIVTYNTLIDGY 579
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + +VN+M G+ PD+ TYN + GL RK R
Sbjct: 580 CKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSR 622
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 158/349 (45%), Gaps = 16/349 (4%)
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
I P PC+ R F+ + F + + G M+K +P V YN
Sbjct: 141 IHQGPRPCN-----------RNFNAVILGFCRKGHVKVGESLLCVMQKF-KCQPDVYAYN 188
Query: 195 VLINGF-VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+LIN + + + FD ALG+ M+ + P +VTF +I+ FC A LF M+E
Sbjct: 189 ILINAYCTRGQTFD-ALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKE 247
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAY-EMIELGCEFSSVTCEILVDGLCNEGRVL 312
G PNVV +NTL+ G+ R + NM Y EM T ILV G GR
Sbjct: 248 AGHIPNVVCYNTLMNGYVKARDIGQA-NMLYEEMKSKAVAPDCTTFNILVAGHYRYGREE 306
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
L+ D S+ G L Y V LC G A++ ++++ +KG P+V+A ++I
Sbjct: 307 DRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSII 366
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
R +A M+K G+ P S+T + L+ L + R +A L +GL
Sbjct: 367 AAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLP 426
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ + +L+ GY R +L NEM G PD ++++++GLS
Sbjct: 427 INKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLS 475
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 136/271 (50%), Gaps = 10/271 (3%)
Query: 183 LIDGRP-SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
+++G P + + + +L++G+ + + A ++ M + PD V F+ I+G
Sbjct: 421 IVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLV 480
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
D A +F +M +KG PN +N+LIRGF + E + + EM G T I+
Sbjct: 481 DEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNII 540
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
++GLC EGR+ A ++ + G++P Y L++ C + EVV++++ G
Sbjct: 541 INGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGW 600
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DV---GRTV 417
P + + GL RK A ++E+++ G++PD+VT+N ++ +C DV V
Sbjct: 601 DPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVLERAMIV 660
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
A L++ P+ +T ++L+S + ++
Sbjct: 661 TAKLLKM-----AFVPNVVTANLLLSHFCKQ 686
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S+ + L+ GF+K +AL RM ++P IL R L R
Sbjct: 80 SVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRG 139
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M +G P +FN +I GF + G ++ M + C+ IL++ C G+
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
A + G P + ++ C +GN A + D + + G++P+V+ T
Sbjct: 200 TFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNT 259
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
L+ G + R +A+ L E+M + + PD TFN L+ GR D DRL S G
Sbjct: 260 LMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSG 319
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
Y+I VSG E + +ML++G P + +NS + S A
Sbjct: 320 SLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRA 372
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 6/212 (2%)
Query: 279 GVNMAYEMIEL----GCEFSS--VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
GV+ + E++E EF S + L+ G +A E+V G+ P
Sbjct: 57 GVDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSA 116
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
L + L G+ G +++ + +G P +I G R L+ M
Sbjct: 117 ITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQ 176
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K PD +N L+ C G+T DA G P +T+ +++ + +
Sbjct: 177 KFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMM 236
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
E NL + M + G IP++ YN+ M+G AR
Sbjct: 237 EARNLFDGMKEAGHIPNVVCYNTLMNGYVKAR 268
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ + K R+FD A ++ M R + VT+N++ISG CR+ + A G
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G +P+ ++ L+ G + E + EM G + + V LVDG
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG+ +A +++ + GV P Y L+ LC G G A ++++E+ K G+ P
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L++G + A L+ +M GILP++ T+ ++ LC G + +A L
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
++GL P+ Y L+ G+++E + M +PDL YNS + GLS
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 3/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ A KA + FE MR+ V+ YNV+I+G + ++A GF + MV
Sbjct: 252 LEAHCKARDFDAAKKVFEEMRRRDCAMNEVT-YNVMISGLCRSGAVEEAFGFKEEMVDYG 310
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD T+ L++G C+ + A L EM G PNVV + TL+ GF E K E
Sbjct: 311 LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAF 370
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ EMI G + + + + L+ GLC G++ +A +L+ + + G P F Y L++
Sbjct: 371 DILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGH 430
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ A E+++E+ G LP+ +I GL + + EA L+E+M+ EG+ P++
Sbjct: 431 FQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 490
Query: 401 VTFNCLLEDLCDVGR-TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+ L+ G ++ + L + L PD Y+ L+ G + R +E E
Sbjct: 491 FMYAPLIIGHSKEGHISLACESLENMTKANVL-PDLFCYNSLIKGLSTVGRIEEAEEYYA 549
Query: 460 EMLDEGFIPDLATYNSYMDGLSNAR 484
++ G +PD TY+ + G R
Sbjct: 550 QVQKRGLVPDEFTYSGLIHGYCKTR 574
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 3/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N K R+ + + M G +P+V +Y L++GF+K + +A + M+
Sbjct: 322 MNGLCKGGRLKEAKALLDEMS--CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA 379
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V+P+ + ++ LI G C+ + A L EM + G P+ +++ L++G F D
Sbjct: 380 GVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGA 439
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM G ++ T I+++GLC G +A L+ + G+ P F Y L+
Sbjct: 440 FELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG+ +A E ++ + K LP + +LI+GL + + EA ++ K G++PD
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
T++ L+ C AD+L GL P+ TY L+ GY + N ++ +++
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619
Query: 460 EMLDEGFIPDLATYNSYMDGLSNAR 484
ML G PD Y + LS +
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSE 644
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PDV T++ + C+ + FD A +F EMR + C N V++N +I G +E
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
EM++ G + T L++GLC GR+ +A L+ + S G+ P Y LV+
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A A ++++E+ G P+ I LI GL ++ + AS L+ +M+K G PD+
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T++ L++ A L G+ P+ TY I+++G + KE NL+ E
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480
Query: 461 MLDEGFIPDLATYNSYMDGLS 481
M+ EG P+ Y + G S
Sbjct: 481 MISEGLKPNAFMYAPLIIGHS 501
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
++ +VL++ + K A M + P N L+ R +L L
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
M G P+V +++T + R FD + EM C + VT +++ GLC G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
V +A + G+ P F Y L+ LC G A ++DE+ G P+V+
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
TL++G + K EA ++ +M+ G+ P+ + ++ L+ LC +G+ A +L
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD TYH L+ G+ + + L+NEM + G +P+ TY ++GL +S
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 175 LAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E++ + P + YN LI G ++A +Y ++ + + PD T++ LI
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLI 567
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G+C+ + + A L ++M G PN ++ L+ G+F ++ ++ M+ G +
Sbjct: 568 HGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDK 627
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ I++ L + A ++ + + G++P Y L+ LC + A+ +
Sbjct: 628 PDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGL 687
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+DE+ K+G P ++ LI+G R A + + +L +G+LP+ VT+ L++ C
Sbjct: 688 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCK 747
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
G DA L +G+ PD Y++L +G + ++ L EM + G+
Sbjct: 748 NGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 801
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 6/300 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ +Y LI G K A + M + V PD+ +N LI G + + A
Sbjct: 487 KPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEE 546
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +++++G P+ +++ LI G+ R ++ + +M+ G + ++ T L++G
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYF 606
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
K ++ G P + Y ++ L N +A V+ E+ K G +P +
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
++LI GL ++ +A GL+++M KEG+ P V +N L++ C R+ D R R +
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC---RSGDISRARNVF 723
Query: 427 ST---KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ KGL P+ +TY L+ G + + +L +MLD G PD YN G S+A
Sbjct: 724 DSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDA 783
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 1/236 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P IY ++I + + A + ++ + PD+ ++ LISG C+ + A+G
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM ++G P +V +N LI GF N+ ++ G + VT L+DG C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + A +L D RG+ P F Y L + AL + +E++ +G V
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVS 805
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
+TL+ G + + E L+ M+ I+P++ T ++ + G+ +A R+
Sbjct: 806 LFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRV 861
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D+ + ++R+L+ S VL + N G+ P++ I+ ++ K
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKN-------GLV--PDL-HIYSSLISGLCKM 678
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
M + + M K +G P + YN LI+GF + + +A +D ++ + P+ V
Sbjct: 679 ADMEKAVGLLDEMAK--EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+ LI G C+N A L+++M ++G P+ +N L G ++ + + EM
Sbjct: 737 TYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 796
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD------FDYFGLVEKL 340
G S+ LV G C GR+ + +L+ R ++P FG KL
Sbjct: 797 FNRGYAHVSLF-STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKL 855
Query: 341 C 341
C
Sbjct: 856 C 856
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%)
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+ ++LVD G V A ++V+ G+ P GL++ L + ++
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+ G P V +T +E + R A + E+M + + VT+N ++ LC G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+A + GL PD TY L++G + R KE + L++EM G P++ Y
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 475 SYMDGLSNARKSVR 488
+ +DG K+
Sbjct: 355 TLVDGFMKEGKAAE 368
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 11/301 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R + +N L++ K + + A + + R +PD VT+NIL +G+C K+ +AL
Sbjct: 171 RQDLHSFNTLLDILCKSKRVETAHSLL-KTLTSRFRPDTVTYNILANGYCLIKRTPMALR 229
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +EM ++G P +V++NT+++G+F + E EM + CE VT ++ G
Sbjct: 230 VLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFG 289
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSV 365
G V KA + + + GV+P Y L++ LC + + A+ V +E+ ++G +P+V
Sbjct: 290 VAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNV 349
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +I GL + A G ME+M + G+ T+N ++ CD G A +
Sbjct: 350 VTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGK 409
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLV------NEMLDEGFIPDLATYNSYMDG 479
P+ TY++L+S RK+ E+LV +M+D GF+P T+N ++G
Sbjct: 410 MGDGSCLPNLDTYNVLISAMF---VRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNG 466
Query: 480 L 480
L
Sbjct: 467 L 467
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 20/316 (6%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
R D +F ++ L S R HS+L +++ P D + ++ N +
Sbjct: 170 IRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRP---DTV--------TYNILANGY 218
Query: 165 VKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
R +A +++++ P++ YN ++ G+ + + +A FY M + + +
Sbjct: 219 CLIKRTP---MALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCE 275
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
DVVT+ +I GF A +F EM ++G PNV ++N LI+ + + V +
Sbjct: 276 IDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVV 335
Query: 283 AYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
EM G C + VT +++ GLC+ G + +A + G+ Y ++ C
Sbjct: 336 FEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFC 395
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG---VEASGLMEKMLKEGILP 398
G ALEV ++ LP++ LI + +K V A L+ M+ G LP
Sbjct: 396 DAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLP 455
Query: 399 DSVTFNCLLEDLCDVG 414
TFN +L L G
Sbjct: 456 RKFTFNRVLNGLVITG 471
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 142/355 (40%), Gaps = 39/355 (10%)
Query: 171 NDGLLAFEAMRKLIDGRPSV----SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
N G A + + L PS S ++ ++ + R+F+ A RM R+ P
Sbjct: 81 NHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPK 140
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI------------------- 267
T IL + N K A+ F M E G ++ SFNTL+
Sbjct: 141 TLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTL 200
Query: 268 ---------------RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G+ ++ + + EM++ G E + VT ++ G ++
Sbjct: 201 TSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIK 260
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A E ++ +R Y ++ G+ A V E+ K+G +P+V LI
Sbjct: 261 EAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALI 320
Query: 373 EGLRRLRKGVEASGLMEKMLKEGI-LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+ L + A + E+M +EG+ +P+ VT+N ++ LC VG A GL
Sbjct: 321 QVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGL 380
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
TY++++ + ++ + +M D +P+L TYN + + +KS
Sbjct: 381 RACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKS 435
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + ++N++ + + M+K V Y +I+GF + KA + M
Sbjct: 246 YNTMLKGYFRSNQIKEAWEFYLEMKKR-KCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEM 304
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPNVVSFNTLIRGFFGERK 275
V++ V P+V T+N LI C+ + A+ +F EM RE C PNVV++N +IRG
Sbjct: 305 VKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGD 364
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE------------------- 316
+ + M E G T +++ C+ G V KA E
Sbjct: 365 MERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNV 424
Query: 317 -------------------LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
L++D RG LP+ F + ++ L GN A E++
Sbjct: 425 LISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEIL 480
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 168/400 (42%), Gaps = 78/400 (19%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +++F K ++ D L F + + +V Y+ LI+G K + A +D M
Sbjct: 393 YSILIDSFCKRGKL-DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + +KP+VV + LISG+C+ + A L+ EM KG +PN +F LI G +
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + EM+E + VT +L++G C EG ++A EL+ + +G++P + Y L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 337 VEKLCGEGNAGIALEVVDELWKK--------GNLPSVIACTTLIEGLRRL---------- 378
+ LC G A E +++L + G LP+V+ T LI GL ++
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLC 631
Query: 379 ------------------------RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
+E + + +L EG L ++VT+N L+ C +G
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 691
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL---- 470
R +A + + G+ PD ++Y ++ Y R KE L ML+ G PD
Sbjct: 692 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 751
Query: 471 -------------------------------ATYNSYMDG 479
ATYNS + G
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 174/411 (42%), Gaps = 38/411 (9%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCP-------------CSNDGIFSCP 151
R D + +VRSL F V+ + ++ C C N ++
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270
Query: 152 EMERIFHFA------------VNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLI 197
E++ + + V K G E M ++I+ PS + + L+
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE---EMMNEMIEFGFVPSEAAVSNLV 327
Query: 198 NGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
+G K A +++ + V P + +N LI+ C++ K D A LF M KG
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN V+++ LI F K D ++ +M E+G + + L+ G C G++ A L
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSL 447
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ G+ P Y L+ C EG A + E+ KG P+ T LI GL
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ EA+ L +M++ ++P+ VT+N L+E C G TV A L KGL PD T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 438 YHILVSGYTRENRRKEGENLVNEMLD--------EGFIPDLATYNSYMDGL 480
Y L+SG R E +N++ EG +P++ TY + ++GL
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 11/312 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +YN LIN K + D+A ++ M + P+ VT++ILI FC+ K D+AL
Sbjct: 353 PSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHF 412
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M E G V +++LI G K ++ EMI G + + V L+ G C
Sbjct: 413 LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + A L + + +G+ P + + L+ LC A ++ E+ + +P+ +
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL----- 422
LIEG + V A L+++M+++G++PD+ T+ L+ LC GR +A
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592
Query: 423 ---RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L +G P+ +TY L++G + + E L EML +P+ TY ++D
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652
Query: 480 LS---NARKSVR 488
L+ N K+++
Sbjct: 653 LTSEGNIEKAIQ 664
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 165/404 (40%), Gaps = 75/404 (18%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYD 214
F + +V+ R DGL+ +R ++D P + + ++NG ++ R+F AL +D
Sbjct: 148 FDLLIQTYVQNRRELDGLVV---VRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+V ++PDV + ++ C K F A + M GC+ +V ++N IRG +
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264
Query: 275 K-----------------------------------FDEGVNMAYEMIELGCEFSSVTCE 299
+ F+ G M EMIE G S
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324
Query: 300 ILVDGL-----------------------------------CNEGRVLKACELVIDFSRR 324
LVDGL C +G++ +A L + +
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G+ P D Y L++ C G +AL + ++ + G +V ++LI G +L K A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L ++M+ G+ P+ V + L+ C G +A RL + KG+ P+ T+ L+SG
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
NR E L EM++ IP+ TYN ++G +VR
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVR 548
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 126/307 (41%), Gaps = 46/307 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ ANRM + F M + + P+ YNVLI G K +A D M
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEW-NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEM 556
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK--------GCNPNVVSFNTLIR 268
V + PD T+ LISG C + A +++ + GC PNVV++ LI
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALIN 616
Query: 269 GFFGERKFDEGVNMAYEM----------------------------IEL------GCEFS 294
G D+ + EM I+L G +
Sbjct: 617 GLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLAN 676
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
+VT IL+ G C GR+ +A E++++ G+ P Y ++ + C G+ A+++ +
Sbjct: 677 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC--- 411
+ +G P +A LI G + +A L + M++ G+ P+ T+N L+ C
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMS 796
Query: 412 DVGRTVD 418
V T D
Sbjct: 797 SVSSTAD 803
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 291 CEFSS-VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
C FS+ + ++L+ R L +V G+LP+ G++ L +A
Sbjct: 140 CNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMA 199
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
L + DE+ G P V T ++ L L+ + A ++ +M G T+N +
Sbjct: 200 LHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRG 259
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC R +A ++ L S KGL D TY LV G + + GE ++NEM++ GF+P
Sbjct: 260 LCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPS 319
Query: 470 LATYNSYMDGL 480
A ++ +DGL
Sbjct: 320 EAAVSNLVDGL 330
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 6/235 (2%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ L S+ R SE +N + + I C + +N K
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE--IEGCLPNVVTYTALINGLCKI 621
Query: 168 NRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
M+ LL E + + P+ + Y ++ +KA+ +D ++ + + V
Sbjct: 622 GLMDKAELLCREMLAS--NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL-ANTV 678
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+NILI GFC+ + A + M + G +P+ +S++T+I + E + + M
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ G +V L+ G C G + KA EL D RRGV P Y L+ C
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 47/371 (12%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
+++ + K R+ D F M R L+ P+ +N LI+G+ K E D A+G
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV---PNRVTFNTLIDGYCKAGEVDVAIGLR 159
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM +++V+P ++TFN L+SG C+ ++ + A + E++ G P+ +++ + G
Sbjct: 160 ERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLL-- 217
Query: 274 RKFDEGVNMAY----EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
K D+G A E I G + + TC IL++GLC EG+V KA E++ G++P
Sbjct: 218 -KSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ Y +V C G+ A+ ++++ +G P+ IA ++I+ ++ +A ++
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK 336
Query: 390 KMLKEGILPDSVTFNCLLED-----------------------------------LCDVG 414
KM+ +GI P T+N L++ LC G
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDG 396
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ ++A+ + +G+ P+ Y++L+ G + +E +EM G + TYN
Sbjct: 397 KILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYN 456
Query: 475 SYMDGLSNARK 485
S + GL K
Sbjct: 457 SLIKGLCKMGK 467
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 153/304 (50%), Gaps = 3/304 (0%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E ++ L++ P IYN ++NG+ + + D+A+ ++M ++P+ + FN +I
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVID 320
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FC + D A ++M KG P+V ++N LI G+ F + EM E G +
Sbjct: 321 KFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKP 380
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ ++ L++ LC +G++L+A ++ D RGVLP Y L++ C G AL
Sbjct: 381 NVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFF 440
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
DE+ K G +++ +LI+GL ++ K EA + + G PD +T+N L+ +
Sbjct: 441 DEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNA 500
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G + L GL P T+H L+SG ++E + + E L NEML PD Y
Sbjct: 501 GNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVY 559
Query: 474 NSYM 477
N+ +
Sbjct: 560 NAMI 563
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 159/323 (49%), Gaps = 8/323 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V + V++ + ++ L F+ M L RP +Y + VK + A+ ++ M R +
Sbjct: 38 VESLVESKKFDNVLDLFKEMVGL-GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V P+V +N+LI G C+ K+ A LF EM + PN V+FNTLI G+ + D +
Sbjct: 97 VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAI 156
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ M + E S +T L+ GLC R+ +A ++ + G +P F Y + + L
Sbjct: 157 GLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGL 216
Query: 341 C-GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+ AG AL++ E KG C+ L+ GL + K +A +++ +++ G++P
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLL---ASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
V +N ++ C +G D DR L ++GL P+ + ++ ++ + + E
Sbjct: 277 EVIYNTIVNGYCQIG---DMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEE 333
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
V +M+ +G P + TYN +DG
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDG 356
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 39/362 (10%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
E I++ VN + + M+ +L E M R L RP+ +N +I+ F + + DKA
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGL---RPNCIAFNSVIDKFCEMQMIDKAEE 333
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ +MV + P V T+NILI G+ R F + EM E G PNV+S+ +LI
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC 393
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ K E + +M+ G ++ +L+DG C G++ +A + S+ G+
Sbjct: 394 KDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIV 453
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA----------------CTTLIEGL 375
Y L++ LC G A E+ + G+ P VI C L E +
Sbjct: 454 TYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM 513
Query: 376 RRL-----------------RKGVE-ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
++L ++G++ L +ML+ + PD V +N ++ + G
Sbjct: 514 KKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
A L+ G+ PD TY+ L+ G+ +E + E ++LV++M +G IP+ TY+ +
Sbjct: 574 KAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633
Query: 478 DG 479
G
Sbjct: 634 QG 635
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 175/387 (45%), Gaps = 24/387 (6%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANP-CPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TF ++ L + R E +LN I N P DG + + +K++
Sbjct: 173 TFNSLLSGLCKARRIEEARCMLNEIKCNGFVP---DGF--------TYSIIFDGLLKSD- 220
Query: 170 MNDGL-LAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
DG A + R+ I + Y ++L+NG K + +KA +V + P V
Sbjct: 221 --DGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEV 278
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+N +++G+C+ D A+ +M +G PN ++FN++I F + D+ +M
Sbjct: 279 IYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKM 338
Query: 287 IELGCEFSSVTCEILVDG---LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
+ G S T IL+DG LC R + E + G P Y L+ LC +
Sbjct: 339 VGKGIAPSVETYNILIDGYGRLCVFSRCFQILE---EMEENGEKPNVISYGSLINCLCKD 395
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A V+ ++ +G LP+ LI+G + K EA ++M K GI VT+
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L++ LC +G+ +A+ + L ++ G PD +TY+ L+SGY+ ++ L M
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515
Query: 464 EGFIPDLATYNSYMDGLSNARKSVRQT 490
G P + T++ + G S +++T
Sbjct: 516 LGLKPTINTFHPLISGCSKEGIKLKET 542
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 6/228 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN LI+G+ K L Y+ M + +KP + TF+ LISG C + L L
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETL 543
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM + +P+ V +N +I + + ++ EM+++G + T L+ G
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLK 603
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG++ + +LV D +G++P+ Y L++ C + A E+ + G LP+V
Sbjct: 604 EGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCI 663
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
C L GLR+ + EA + +M+ G+ D++ N EDL DV +
Sbjct: 664 CNELSTGLRKDGRLQEAQSICSEMIANGM--DNLDTN---EDLSDVAK 706
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 38/270 (14%)
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG----------CEFSSV 296
L+ MR++G P+ ++ +KFD +++ EM+ LG ++V
Sbjct: 18 LYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAV 77
Query: 297 TC-------------------------EILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+L+ GLC E R+ A +L + S R ++P
Sbjct: 78 KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ L++ C G +A+ + + + K+ PS+I +L+ GL + R+ EA ++ ++
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197
Query: 392 LKEGILPDSVTFNCLLEDL--CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
G +PD T++ + + L D G D R A KG+ D T IL++G +E
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYR-EAIGKGVKIDNYTCSILLNGLCKEG 256
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++ E ++ +++ G +P YN+ ++G
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%)
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G+ +A+E+ + + ++ +P+V LI GL + ++ +A L +M ++P+ VTF
Sbjct: 80 GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
N L++ C G A LR + ++P +T++ L+SG + R +E ++NE+
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199
Query: 464 EGFIPDLATYNSYMDGL 480
GF+PD TY+ DGL
Sbjct: 200 NGFVPDGFTYSIIFDGL 216
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF ++++D RP YN LI G +K + + D M + P+ T+++LI
Sbjct: 575 AFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQ 634
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
G C K F+ A +REM E G PNV N L G + + E ++ EMI G
Sbjct: 635 GHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 305 LCNEGRVLKACELVIDFSRR-GVLPKDFDYFGL-VEKLCGEGNAGIALEVVDELWKKGNL 362
+C+E ++ + DF R+ G LP F Y + VE L L++ E+ G
Sbjct: 5 VCSESKMHSQVSELYDFMRQEGRLP-SFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFR 63
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P + + +L A L E M + ++P+ +N L+ LC R DA++L
Sbjct: 64 PDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKL 123
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
S + L P+ +T++ L+ GY + L M E P + T+NS + GL
Sbjct: 124 FGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCK 183
Query: 483 ARK 485
AR+
Sbjct: 184 ARR 186
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G+ C + ++ K R+ + M K P+V Y ++++ F K
Sbjct: 322 GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK-KGFAPNVVTYTIVLHSFCKNGM 380
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+D + M + + +N +I C++ + D A+GL +EMR +GCNP++ S+NT
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 440
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I + +E +M ++E G + +T ++ L +GR A L + G
Sbjct: 441 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 500
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
Y GL++ +C +GN +L +++E+ +KG P+ ++ LI L + R+ +A
Sbjct: 501 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 560
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ML +G+ PD VT+N L+ LC +G A L + + PD +TY+IL+S +
Sbjct: 561 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 620
Query: 446 TRENRRKEGENLVNEML 462
+ + L+N +
Sbjct: 621 CKVRLLDDAAMLLNRAM 637
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 153/295 (51%), Gaps = 6/295 (2%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V ++N +I G + + +A Y+ M +PD T++IL+ G C+ + A+ L
Sbjct: 294 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 353
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
REM +KG PNVV++ ++ F +D+ + EM G +S ++ LC +
Sbjct: 354 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 413
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ +A L+ + +G P Y ++ LC A + + L ++G + + I
Sbjct: 414 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 473
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL--- 425
T+I L R + +A L ++M+ G D V++N L++ +C G + DR +L
Sbjct: 474 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG---NVDRSLVLLEE 530
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ KG+ P+ ++Y+IL+S +E R ++ L +ML++G PD+ TYN+ ++GL
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 198 NGFVKCREFDKALGFYDRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
G + R F Y RMV RDRV P TF + CR + D AL L R M GC
Sbjct: 135 GGLPRARRF----ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGC 190
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
P+ V + T+I + E + EM+ +GC T + +V G+C GRV +A
Sbjct: 191 VPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR 250
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLC-------------------------------GEGN 345
LV +G +P Y L++ LC EG
Sbjct: 251 LVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGK 310
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A E+ + + KG P + L+ GL +L + A L+ +M K+G P+ VT+
Sbjct: 311 LAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 370
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+L C G D L S KGL + Y+ ++ ++ R E L+ EM +G
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430
Query: 466 FIPDLATYNSYMDGLSN 482
PD+ +YN+ + L N
Sbjct: 431 CNPDICSYNTIIYHLCN 447
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 149/319 (46%), Gaps = 1/319 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ + + ++ + +E M L +P Y++L++G K A+
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLRE 355
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + P+VVT+ I++ FC+N +D L EM KG N +N +I + +
Sbjct: 356 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 415
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE + + EM GC + ++ LCN ++ +A + + GV+ Y
Sbjct: 416 MDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNT 475
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ L +G A+ + E+ G V++ LI+ + + + L+E+M ++G
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I P++V++N L+ +LC R DA L +GL PD +TY+ L++G +
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 456 NLVNEMLDEGFIPDLATYN 474
NL+ ++ +E PD+ TYN
Sbjct: 596 NLLEKLHNENVHPDIITYN 614
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 31/324 (9%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + V + D+AL M R PD V + +I C A L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM GC +V +F+ ++RG G + E + M+ GC +T L+ GLC
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 308 -------------------------------EGRVLKACELVIDFSRRGVLPKDFDYFGL 336
EG++ +A EL +G P Y L
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 336
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G G A+ ++ E+ KKG P+V+ T ++ + + L+E+M +G+
Sbjct: 337 MHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 396
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+S +N ++ LC GR +A L ++G +PD +Y+ ++ + +E E+
Sbjct: 397 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEH 456
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +L+EG + + TYN+ + L
Sbjct: 457 MFENLLEEGVVANGITYNTIIHAL 480
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ L RL + EA L+ M + G +PD+V + ++ LCD G +A L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G D T+ +V G R +E LV+ M+ +G +P + TY + GL
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 483 ARKS 486
R++
Sbjct: 277 VRQA 280
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 11/335 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ ++ + KA ++ + + E ++++I RP +Y ++ K +AL +
Sbjct: 85 YSTLLSGYCKAGKVEE---SRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLE 141
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+R P ++TFN LISG CR K ++A L + M G +VV++NTL+ G
Sbjct: 142 EMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAG 201
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ E + M GC V V GLC G+VL A +++ P Y
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 335 GLVEKLCGEGNAGIALEVVDELWKK-GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
+++ LC G ALE+++++ G +V+ +T+++GL +L + EA +ME M +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G PD VT++ L+ LC G+ +A + +G P+ +TY LV G R E
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381
Query: 454 GENLVNEMLDEGFI-----PDLATYNSYMDGLSNA 483
E +V EM G P ++TYN+ + GL A
Sbjct: 382 AERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKA 416
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
M D LL A + + V YN L++G K +A +RM PDVV ++
Sbjct: 170 MADSLLQTMAASGV---KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+ G C++ K A + +MR+ +PNVV++NT++ G K D + M +M
Sbjct: 227 SFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 290 -GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC + V +VDGLC GR +A ++ +R G P Y LV LC G
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL-----PDSVTF 403
A+E V E+ +G P+ + +L+ GL + EA ++E+M G P T+
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY 406
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
N L+ LC GR DA + ++G DPDG++Y +V G R R
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 173/386 (44%), Gaps = 51/386 (13%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
CP F+ VN F K R D LL A R + +P+V YN L+ G K +
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGI---QPNVVSYNGLLEGLCKLERWH 62
Query: 208 KALGFYDRMVRD------RVKPDVVTFNILISGFCRNKKFDLALGLFRE----------- 250
+A + +VRD R PD+VT++ L+SG+C+ K + + L +E
Sbjct: 63 EA----EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118
Query: 251 ------------------------MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
M GC P +++FNTLI G E+ + ++ M
Sbjct: 119 MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTM 178
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + VT L+DGLC GR+ +A +L+ G P Y V LC G
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEGILPDSVTFNC 405
A +V++++ + P+V+ T+++GL + K A +ME+M +G + V ++
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
+++ LC +GRT +A + + G PD +TY LV+G + + +E V EM EG
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 466 FIPDLATYNSYMDGLSNARKSVRQTR 491
P+ TY S + GL + + R
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAER 384
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M R P+ VTFN L++GF + + L M +G PNVVS+N L+ G +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 276 FDEGVNMAYEMIELGCEFSS--VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E + +MI G + VT L+ G C G+V ++ EL+ + RG+ P Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ LC G ALE+++E+ + G P++I TLI G R + A L++ M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G+ D VT+N L++ LC GR +A++L G PD + Y V G + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ +M D P++ TYN+ +DGL + K
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 7/269 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ KA R+ + E M K P V Y+ + G K + A ++M
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGERK 275
P+VVT+N ++ G C++ K D AL + +M GC NVV ++T++ G +
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E ++ M GC VT LV+GLC G++ +A E V + + G P Y
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNL-----PSVIACTTLIEGLRRLRKGVEASGLMEK 390
LV LC G A +V+E+ G PSV LI GL + + +A ++
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
M +G PD V+++ ++E L GR + A
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+ D T+ ++ L + R E +L + A+ C P++ F V
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA---------PDVVAYSSF-VYGL 232
Query: 165 VKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR-DRVKP 223
K+ ++ + E MR D P+V YN +++G K + D AL ++M D
Sbjct: 233 CKSGKVLNAHQVLEQMRD-SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMA 283
+VV ++ ++ G C+ + A + M GC P+VV++++L+ G K +E V
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL-----PKDFDYFGLVE 338
EM GC+ ++VT LV GLC+ GR+ +A +V + S G P Y L+
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIG 411
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
LC G AL+ + +G P ++ +T++EGL R + ++A
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 54/408 (13%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
TF ++ L E ++ F+ CS D + ++ ++ + K +
Sbjct: 201 TFNIVIDFLCKQGELVEARAL--FVRMKAMGCSPDVV--------TYNSLIDGYGKCGEL 250
Query: 171 NDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
+ L MRK V YN LIN F K +KA ++ M R V +VVT +
Sbjct: 251 EEVELLVSEMRK-SGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLST 309
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+ FC+ A+ LF +MR +G PN ++ +L+ G + D+ + + EM+ G
Sbjct: 310 FVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 369
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
+ VT ++VDGLC EG+V A +++ R GV + Y L+ N+ AL
Sbjct: 370 LVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERAL 429
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM------------------- 391
++++E+ KG V TLI GL +++K EA L+ KM
Sbjct: 430 DLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAF 489
Query: 392 ---LKE-------------GILPDSVTFNCLLEDLCDVGRTVDA----DRLRLLASTKGL 431
KE G+ P+ VT+ L++ LC G +A D++R L GL
Sbjct: 490 FKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMREL----GL 545
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
DP+ Y L+ G+ + + +L+NEM+D+G D Y S +DG
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDG 593
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 148/303 (48%), Gaps = 10/303 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N++I+ K E +A + RM PDVVT+N LI G+ + + + L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EMR+ GC +VV++N LI F ++ + EM LG + VT VD C
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG V +A +L RG++P +F Y LV+ C G A+ ++DE+ +G +P+V+
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL-- 425
T +++GL + K A ++ M + G+ + + + L+ G ++ + R L
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH-----GHFMNKNSERALDL 431
Query: 426 ---ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
KG++ D Y L+ G + + E ++L+++M D G P+ Y + MD
Sbjct: 432 LNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFK 491
Query: 483 ARK 485
A K
Sbjct: 492 AGK 494
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ K + + F M K + P V YN LI+G+ KC E ++ M
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRM-KAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ DVVT+N LI+ F + + A F EM+ G NVV+ +T + F E
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + + +M G + T LVDG C GR+ A L+ + +G++P Y +
Sbjct: 321 REAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 380
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ LC EG +A +V+ + + G + + TTLI G + A L+ +M +G+
Sbjct: 381 VDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGM 440
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D + L+ LC V + +A L GL P+ + Y ++ + + + E
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVA 500
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L++++ D G P++ TY + +DGL A
Sbjct: 501 LLHKIPDSGLQPNVVTYCALIDGLCKA 527
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%)
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
G R+ P+V TFNI+I C+ + A LF M+ GC+P+VV++N+LI G+
Sbjct: 185 GLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 244
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ +E + EM + GC VT L++ G + KA + R GV+
Sbjct: 245 GKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANV 304
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
V+ C EG A+++ ++ +G +P+ T+L++G + + +A L+++
Sbjct: 305 VTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 364
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+ +G++P+ VT+ +++ LC G+ AD + L G+ + + Y L+ G+
Sbjct: 365 MVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKN 424
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +L+NEM ++G D++ Y + + GL +K
Sbjct: 425 SERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQK 459
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 5/316 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V+ KA R++D ++ + M + L+ P+V Y V+++G K + A M R
Sbjct: 346 VDGTCKAGRLDDAIVLLDEMVHQGLV---PNVVTYTVMVDGLCKEGKVAVADDVLSLMER 402
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
VK + + + LI G NK + AL L EM+ KG +V + TLI G +K DE
Sbjct: 403 AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDE 462
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ ++M + G ++V ++D G+ +A L+ G+ P Y L++
Sbjct: 463 AKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALID 522
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC G+ A+ D++ + G P+V TTLI+G ++ +A LM +M+ +G+
Sbjct: 523 GLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSL 582
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D V + L++ G A L+ GL D Y +SG+ N +E ++
Sbjct: 583 DKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVL 642
Query: 459 NEMLDEGFIPDLATYN 474
+EM+ G PD YN
Sbjct: 643 SEMIGTGITPDKTAYN 658
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
+Y LI+G + ++AL + M ++ DV + LI G C+ +K D A L +M
Sbjct: 411 LYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
+ G PN V + T++ FF K E V + +++ + G + + VT L+DGLC G +
Sbjct: 471 DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSI 530
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A G+ P Y L++ C G+ A+ +++E+ KG + T+L
Sbjct: 531 YEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSL 590
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I+G + A L KM++ G+ D + C + C++ +A + G+
Sbjct: 591 IDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 650
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEM 461
PD Y+ L+ Y + +E +L NEM
Sbjct: 651 TPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+ IY +++ F K + +A+ ++ ++P+VVT+ LI G C+ A+
Sbjct: 476 RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS 535
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F +MRE G +PNV + TLI GF + V++ EM++ G V L+DG
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+G + A L G+ + Y + C A V+ E+ G P
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKT 655
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
A LI ++L EAS L +M +SV +C ED
Sbjct: 656 AYNCLIRKYQKLGNMEEASSLQNEM-------ESVLSSCTEED 691
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L++ P+V Y LI+ + K + + AL YD M + PDVVT+ +++G C++ K +
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A +FREM E G PN S+ TLI F E E + M+ G F V L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
DGL G A ++ ++P Y L++ C G+ ++ E+ +K
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259
Query: 363 PSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVG-RTVDA 419
P+VI +++++G +KG+ EA +M KM++ ILP+ + L++ R +
Sbjct: 260 PNVIVYSSIVDGYT--KKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D + + S +GL+ + V+ R R +E + L +M+ G +PD Y S MDG
Sbjct: 318 DLFKEMKS-RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376
Query: 480 LSNARK 485
A K
Sbjct: 377 FFKAGK 382
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 149/297 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
R SV +NVLI+G+ + E +A+ + M + PD+VT+N L++GFC+ A
Sbjct: 14 RRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKK 73
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L E+ PNV+++ TLI + + ++ + M EM VT +++GLC
Sbjct: 74 LMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+V +A + + GV+P F Y L++ L EGN A + + +G V+
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T L++GL + A + + +L+E ++P+ VT++ L++ C +G + L
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K + P+ + Y +V GYT++ E +++ +M+ +P++ Y + +DG A
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y+ LI+G K + +K M + P+V+ ++ ++ G+ + + A+ +
Sbjct: 225 PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDV 284
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M ++ PNV + TLI G+F + +++ EM G E ++ + V+ L
Sbjct: 285 MRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKR 344
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR+ +A EL D RG+LP +Y +++ G A + E+ +K + V+A
Sbjct: 345 SGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVA 404
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI GL +L K E+ M + G+ PDS TFN ++ C G +A +L
Sbjct: 405 YNVLINGLFKLGK-YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMK 463
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ GL P+ +T +ILV ++ +L+N+ML GF P T+ + +D S +R++
Sbjct: 464 SYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 13/340 (3%)
Query: 158 HFAVNAFV----KANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALG 211
+F +++FV ++ RM + F+ M R L+ R + Y +++GF K + A
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN---YTSMMDGFFKAGKESDAFN 388
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
M DVV +N+LI+G + K++ + MR+ G P+ +FNT+I +
Sbjct: 389 IAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMINAYC 447
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E + + EM G + +S+TC ILV LC G + K +L+ D G P
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
+ +++ A + L + D+L G + TLI RL A+ + + M
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ +GIL D +T+N L+ C A + T+G+ P+ TY+IL+ G +
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDG---LSNARKSVR 488
KE LVN+M + G +P+ TY+ + G + N ++ V+
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVK 667
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 2/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ F KA + +D + M + G V+ YNVLING K +++ F+ M +
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVA-YNVLINGLFKLGKYESE-SFHTGMRQLG 431
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ PD TFN +I+ +C+ AL L EM+ G PN ++ N L++ + ++ +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M+ +G + T + ++D R + GV Y L+
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A V ++ KG L +I LI G +A + +ML EG+ P+
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL L +A L +GL P+ TY ILVSG+ + KE L E
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +GF+P TYN + + +K
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKGKK 696
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 133/287 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N +IN + K AL + M +KP+ +T NIL+ C + + + L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M G +P + ++ R+ D ++M +++ +G + T L+ C
Sbjct: 494 LNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCR 553
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + D +G+L Y L+ C + A V ++ +G P+V
Sbjct: 554 LGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVET 613
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
L+ GL R EA+GL+ +M + G++P++ T++ L+ +G + +L
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMI 673
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
TKG P TY++L+S + + + + + L+ EM G P+ +TY+
Sbjct: 674 TKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYD 720
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 12/245 (4%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+S YN LI+ F + +A + M+ + D++T+N LI G+C + A +
Sbjct: 541 LSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHS 600
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M +G +PNV ++N L+ G R E + +M E G ++ T +ILV G G
Sbjct: 601 QMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+ + +L + +G +PK Y L+ A E++ E+ +G P+
Sbjct: 661 NMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYD 720
Query: 370 TLIEGLRRLRK------------GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
LI G +L K EA L E+M ++G +P T C+ L G+
Sbjct: 721 ILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKA 780
Query: 418 DADRL 422
DA R+
Sbjct: 781 DAQRI 785
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI+G R + A L+E M EG PD VT+N L+ C +G A +L S
Sbjct: 22 VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+P+ +TY L+ Y + ++ + +EM + +PD+ TY M+GL + K
Sbjct: 82 NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + Y++L++G K + + Y M+ P T+N+LIS F + KK A L
Sbjct: 644 PNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 248 FREMREKGCNPNVVSFNTLIRGFF 271
+EM+ +G PN +++ LI G++
Sbjct: 704 MQEMQVRGIPPNSSTYDILICGWY 727
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+ VLING K +++M + + P++ T+N L++ +C K A LF EMR
Sbjct: 235 FTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMR 294
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G NVV++NTLI G E + E + +M + + +T L+ G C+ G +
Sbjct: 295 ERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLD 354
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L+ G+ P Y L+E GN ++ E+ +G PS + CT LI
Sbjct: 355 KASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLI 414
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ RL++ +A + M K G++PD + L+ LC G ++ +L ++
Sbjct: 415 DAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVE 474
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS 475
P + Y+ ++ GY +E+ L+ EM +G +P++A+Y+S
Sbjct: 475 PSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSS 517
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 202/465 (43%), Gaps = 54/465 (11%)
Query: 68 QITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFR--HDHTTFLFIVRSLASSYRF 125
+I P L S + Q TH+ F +D + H + L I+ + SS F
Sbjct: 15 KIPPLQALSLFNSSIQQGFQHTHHSIS-FLLQHLLDHHKLPHAQSLILQILSNKISSPFF 73
Query: 126 SELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAF-EAMRKLI 184
+ + S+L+ ++ N P + ++ +NA +K+ ++ L+ F E + K +
Sbjct: 74 T-VPSLLHHLTQNQNPSMTTAL--------LYESIINAHLKSQLLDKALIFFNEMVDKGL 124
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
RP+ I+N L+ V+ F+KA F++ + ++RVK DV +F I+I G C N D +
Sbjct: 125 VFRPN--IFNSLLGSLVRSNCFEKAWLFFNEL-KERVKFDVYSFGIMIKGCCENGNLDKS 181
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +++ G +PNVV + TLI G + +M E+G + T +L++G
Sbjct: 182 FQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLING 241
Query: 305 L-----------------------------------CNEGRVLKACELVIDFSRRGVLPK 329
L C EG++ +A +L + RGV
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L+ +C E A ++VD++ K P++I TLI G + +AS L++
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
++ G+ P VT+N L+E G L +G+ P +T +L+ Y R
Sbjct: 362 QLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQ 421
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL---SNARKSVRQTR 491
++ + + M G +PD+ Y + GL N ++S + R
Sbjct: 422 EMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFR 466
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 117/236 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+V YN LI G + +A D+M + V P+++T+N LI GFC D A
Sbjct: 299 EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASS 358
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +++ G +P++V++N LI G+ + ++A EM G S VTC +L+D
Sbjct: 359 LLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV 418
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ KA ++ + G++P + Y L+ LC +GN + ++ + + PS +
Sbjct: 419 RLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV 478
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
T+I G + A L+ +M +G++P+ +++ ++ LC G+ +A+ L
Sbjct: 479 IYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVL 534
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN LI GF DKA D++ + + P +VT+NILI G+ + + L
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADL 394
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
REM +G +P+ V+ LI + ++ ++ + M + G +L+ GLC
Sbjct: 395 AREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCM 454
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + ++ +L V P D Y ++ C E N+ AL ++ E+ KG +P+V +
Sbjct: 455 KGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+++I L + K EA L++KM++ + P + N +
Sbjct: 515 YSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 154/315 (48%), Gaps = 12/315 (3%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
LA+E + K P V Y+ LI G + + +A G D M+ +P V T+ ++
Sbjct: 147 LAWELIHK-SGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQA 205
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR+ + A L EM GC PNVV++N LIR + KFDE + E + S
Sbjct: 206 YCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPS 265
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG---NAGIALE 351
+VT I ++GLC +G+ +A EL+ G+ P + + L+ LC +A LE
Sbjct: 266 TVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLE 325
Query: 352 VVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
EL W G V+A T++ L + K L+ M+K+GI P++ TFN L+ L
Sbjct: 326 RSTELKWYAG----VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSL 381
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G++ A + L + G + +TY+IL+ + + E L++ M ++ PD
Sbjct: 382 CVGGKSSLA---KSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDE 438
Query: 471 ATYNSYMDGLSNARK 485
TY +DGL RK
Sbjct: 439 VTYTIIIDGLCRERK 453
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 13/275 (4%)
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR-------EKGCNPNVVSFNTLIRGF 270
R R++ D +N+ + D + +F E++ + G PNV+ +NTL+
Sbjct: 48 RRRLERD---YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNAL 104
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ E + EM+ G ++ + IL+ A EL+ + GV P
Sbjct: 105 AEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELI---HKSGVEPDV 161
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC G A V+D + +K P V T +++ R + VEA LM +
Sbjct: 162 GTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAE 221
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G LP+ VT+N L+ LCD + + +++ + +STK P +TY+I ++G ++ +
Sbjct: 222 MERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGK 281
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE L++ ML EG P T++ ++ L ++ +
Sbjct: 282 AKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSR 316
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN+L++ F + +A M + PD VT+ I+I G CR +KFD A F
Sbjct: 402 NVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACF 461
Query: 249 REMREKGCNPNVVS 262
+ G + +V++
Sbjct: 462 LKSLTSGLSMDVLT 475
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Query: 188 PSVSIYNVLINGFVK------CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
P+ +N+LI + +LGF +VVT+NIL+ F + K
Sbjct: 369 PNTRTFNILIRSLCVGGKSSLAKSLIHSLGF---------AANVVTYNILLHWFYYHGKL 419
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
A L M EK P+ V++ +I G ERKFD
Sbjct: 420 TEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFD 455
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 20/333 (6%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
K + ++D + F M + PS+ + ++ K R + A+ Y M V P
Sbjct: 31 KFDSIDDAVALFHRMVDM-HPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89
Query: 226 VTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
VTFNILI+ FC + D A + ++ + GC PNVV+F TL++GF K + + + E
Sbjct: 90 VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149
Query: 286 MIELGCEFSSVTCEILVDGLCNE--GRVLKACELVIDFSRRGVL-PKDFDYFGLVEKLCG 342
M+ F V L++GLC G+ A +L+ R ++ P Y +V LC
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL--RKGV--------------EASG 386
+GN A + ++ +G P + ++LI GL R RK V EA
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M++ G D + +N L+ C + +A +L + +G PD +TY IL+ GY
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++ E NL + M++ G +PD+ +YN + G
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKG 362
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 163/323 (50%), Gaps = 20/323 (6%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR--- 237
R+L+ +P++ +YN +++G K ++A +M+ + PD+ T++ LI G CR
Sbjct: 190 RQLV--KPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQ 247
Query: 238 -------------NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
N K D A LF M E+G +++++N L+ G+ K E + +
Sbjct: 248 RKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFH 307
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
M+E G + ++T IL+ G C +V +A L RG++P + Y L++ C
Sbjct: 308 MMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFE 367
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LKEGILPDSVTF 403
G A+ ++++++ K +P++I ++++GL + ++A L+++M PD T+
Sbjct: 368 RVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTY 427
Query: 404 NCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
N LLE LC + A + L + P+ +Y+IL+SG + R E NL N M
Sbjct: 428 NILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMC 487
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
+ +PD+ TYN +D L N ++
Sbjct: 488 FKNLVPDIVTYNILLDALFNGQQ 510
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 3/315 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F N++++ F M + + ++ YN+L+NG+ + +A + MV
Sbjct: 255 LNGFCLNNKVDEARELFNVMIERGEQHDIIN-YNILMNGYCLNNKVGEARKLFHMMVERG 313
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD +T+ IL+ G+C K D A LF M E+G P+V S+N LI+G+ + E +
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG-LVEK 339
N+ +M + +T +VDGLC G +L A +LV + P D + L+E
Sbjct: 374 NLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLES 433
Query: 340 LCGEGNAGIALEVVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
LC A+ L +++ P+V + LI G + R+ EA L M + ++P
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVP 493
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D VT+N LL+ L + + A L + +G+ P+ TY+IL++G + R K + +
Sbjct: 494 DIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKIS 553
Query: 459 NEMLDEGFIPDLATY 473
+ G+ PD+ TY
Sbjct: 554 LYLSIRGYHPDVKTY 568
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L+NGF + D+A ++ M+ + D++ +NIL++G+C N K A LF M E+G
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P+ +++ L+ G+ K DE N+ + MIE G + IL+ G C RV +A
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL-WKKGNLPSVIACTTLIEG 374
L+ D + ++P Y +V+ LC G A ++VDE+ + P V L+E
Sbjct: 374 NLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLES 433
Query: 375 LRRLRKGVEASGLMEKMLKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L R+ +A + ++ E P+ ++N L+ C R +A L K L P
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVP 493
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+IL+ + + L+ +++D+G P+L TYN ++GL
Sbjct: 494 DIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGL 540
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%)
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
LPS++ T ++ + ++R A L M +G++P +VTFN L+ C +G+ A
Sbjct: 51 LPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFS 110
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ G P+ +T+ L+ G+ ++ + + +EM+ D Y + ++GL
Sbjct: 111 VMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLC 170
Query: 482 NAR 484
++
Sbjct: 171 KSK 173
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 154/315 (48%), Gaps = 12/315 (3%)
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
LA+E + K P V Y+ LI G + + +A G D M+ +P V T+ ++
Sbjct: 151 LAWELIHK-SGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQA 209
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
+CR+ + A L EM GC PNVV++N LIR + KFDE + E + S
Sbjct: 210 YCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPS 269
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG---NAGIALE 351
+VT I ++GLC +G+ +A EL+ G+ P + + L+ LC +A LE
Sbjct: 270 TVTYNIYMNGLCKKGKAKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLE 329
Query: 352 VVDEL-WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
EL W G V+A T++ L + K L+ M+K+GI P++ TFN L+ L
Sbjct: 330 RSTELKWYAG----VVAYNTVMSSLCEMGKWRGIMKLLTDMIKKGIEPNTRTFNILIRSL 385
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C G++ A + L + G + +TY+IL+ + + E L++ M ++ PD
Sbjct: 386 CVGGKSSLA---KSLIHSLGFAANVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDE 442
Query: 471 ATYNSYMDGLSNARK 485
TY +DGL RK
Sbjct: 443 VTYTIIIDGLCRERK 457
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 13/275 (4%)
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR-------EKGCNPNVVSFNTLIRGF 270
R R++ D +N+ + D + +F E++ + G PNV+ +NTL+
Sbjct: 52 RRRLERD---YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNAL 108
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ E + EM+ G ++ + IL+ A EL+ + GV P
Sbjct: 109 AEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELI---HKSGVEPDV 165
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC G A V+D + +K P V T +++ R + VEA LM +
Sbjct: 166 GTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAE 225
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G LP+ VT+N L+ LCD + + +++ + +STK P +TY+I ++G ++ +
Sbjct: 226 MERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGK 285
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KE L++ ML EG P T++ ++ L ++ +
Sbjct: 286 AKEALELLDVMLGEGLEPTAYTWSILLNCLCHSSR 320
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V YN+L++ F + +A M + PD VT+ I+I G CR +KFD A F
Sbjct: 406 NVVTYNILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACF 465
Query: 249 REMREKGCNPNVVS 262
+ G + +V++
Sbjct: 466 LKSLTSGLSMDVLT 479
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Query: 188 PSVSIYNVLINGFVK------CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
P+ +N+LI + +LGF +VVT+NIL+ F + K
Sbjct: 373 PNTRTFNILIRSLCVGGKSSLAKSLIHSLGF---------AANVVTYNILLHWFYYHGKL 423
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
A L M EK P+ V++ +I G ERKFD
Sbjct: 424 TEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFD 459
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 156/333 (46%), Gaps = 5/333 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFY 213
I+ + F A R +DG + +R +I + P V ++ LI+ FVK + +A +
Sbjct: 284 IYTTLIRGFCYAGRWDDGA---KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M++ + PD VT+ LI GFC+ + D A + M KGC PN+ +FN LI G+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+G+ + +M G +VT L+ G C G++ A EL + R V P Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G ALE+ +++ K + +I G+ K +A L +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD T+N ++ LC G +AD L G P+G TY+IL+ + E +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
L+ E+ GF D +T + L+ K+
Sbjct: 581 SAKLIEEIKRCGFSVDASTLRFALSTLARMLKA 613
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 150/307 (48%), Gaps = 2/307 (0%)
Query: 175 LAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LAF AM K+I P ++ LING +AL DRMV KP ++T N L+
Sbjct: 125 LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV 184
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C N K A+ L M E G PN V++ +++ + + + +M E +
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+V I++DGLC +G + A L + +G Y L+ C G ++
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ ++ K+ P V+A + LI+ + K EA L ++M++ GI PD+VT+ L++ C
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A+ + L +KG P+ T++IL++GY + N +G L +M G + D T
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 473 YNSYMDG 479
YN+ + G
Sbjct: 425 YNTLIQG 431
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 6/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K +++ F M I G + + IY LI GF +D
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEME--IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ PDVV F+ LI F + K A L +EM ++G +P+ V++ +LI GF E +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ +M M+ GC + T IL++G C + EL S RGV+ Y
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A E+ E+ + P +++ L++GL + +A + EK+ K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +N ++ +C+ + DA L KG+ PD TY+I++ G ++ E +
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 456 NLVNEMLDEGFIPDLATYNSYMD---GLSNARKSVR 488
L +M ++G P+ TYN + G +A KS +
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+++IN +CR+ A ++++ +PD VTF+ LI+G C + AL L M E
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P +++ N L+ G K + V + M+E G + + VT ++ +C G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL+ R + Y +++ LC +G+ A + +E+ KG +I TTLI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + + + L+ M+K I PD V F+ L++ G+ +A+ L +G+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
D +TY L+ G+ +EN+ + ++++ M+ +G P++ T+N ++G A
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E +RK+ + + + Y+++I+G K D A ++ M K D++ + LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC ++D L R+M ++ P+VV+F+ LI F E K E + EMI+ G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+VT L+DG C E ++ KA ++ +G P + L+ C LE+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ +G + + TLI+G L K A L ++M+ + PD V++ LL+ LCD
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A + ++ D Y+I++ G ++ + +L + +G PD+ T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 473 YNSYMDGL 480
YN + GL
Sbjct: 530 YNIMIGGL 537
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N R+++ L + M ++ +P++ N L+NG + A+ DRM
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEM-GHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +P+ VT+ ++ C++ + LA+ L R+M E+ + V ++ +I G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ EM G + + L+ G C GR +L+ D +R + P + L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ E+ ++G P + T+LI+G + + +A+ +++ M+ +G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ TFN L+ C D L S +G+ D +TY+ L+ G+ + + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ PD+ +Y +DGL +
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCD 469
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
DG+ VS L +G V +E D A+ + M R R +P ++ F+ L S R K++DL
Sbjct: 33 DGKGKVSYRERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLV 91
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L L ++M KG N+ + + +I RK + ++I+LG E +VT L++G
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC EGRV +A ELV G P LV LC G A+ ++D + + G P+
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +++ + + + A L+ KM + I D+V ++ +++ LC G +A L
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
KG D + Y L+ G+ R +G L+ +M+ PD+ +++ +D
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 169/375 (45%), Gaps = 26/375 (6%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ + + + +L+ + + C P + R F+ +N + KA
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG---------PNI-RTFNILINGYCKA 400
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++DGL F M L YN LI GF + + + A + MV RV+PD+V+
Sbjct: 401 NLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ IL+ G C N + + AL +F ++ + ++ +N +I G K D+ ++ +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + T I++ GLC +G + +A L G P Y L+ GEG+A
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ ++++E+ + G SV A T LR + + +MLK G PD TF LL
Sbjct: 580 KSAKLIEEIKRCG--FSVDAST--------LRFALST---LARMLKAGHEPDVFTFTTLL 626
Query: 408 EDLC--DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
C + DA L G P+ +TY+ ++ G N + ++++M + G
Sbjct: 627 RPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERG 686
Query: 466 FIPDLATYNSYMDGL 480
P+ T ++++ GL
Sbjct: 687 CQPNAVTKSTFISGL 701
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ IYN++I+G + D A + + VKPDV T+NI+I G C+ A LFR
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M E G +PN ++N LIR GE + + E+ C FS V L L
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR--CGFS-VDASTLRFALSTLA 608
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI--ALEVVDELWKKGNLPSVIA 367
R+LKA G P F + L+ C E NA + A + + G P+V+
Sbjct: 609 RMLKA----------GHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVT 658
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
T+I+GL + G++++M + G P++VT + + LC
Sbjct: 659 YNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLIN--------------- 198
+ ++ + K +++ L F M + DG P+ YN+LI
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEE--DGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 199 ------GF-VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC--RNKKFDLALGLFR 249
GF V AL RM++ +PDV TF L+ FC N A LF+
Sbjct: 586 EEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFK 645
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
M+ G PNVV++NT+I+G + + +M E GC+ ++VT + GLC +
Sbjct: 646 NMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 120 ASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEA 179
AS+ RF+ L ++ + A P +F+ + R F NA V D F+
Sbjct: 597 ASTLRFA-LSTLARMLKAGHEP----DVFTFTTLLRPFCLEENASV-----YDAPTLFKN 646
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
M K + +P+V YN +I G + + G D+M +P+ VT + ISG C+
Sbjct: 647 M-KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQD 705
Query: 240 KFDLALGLFREM 251
A+ L R+M
Sbjct: 706 LHGSAILLLRKM 717
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
IDG V +N LI+G+ K ++ AL +RM V DVV +N L++GF + D
Sbjct: 182 IDGLDVVG-WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADA 240
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
AL + M+ G PNVV++ LI + + DE ++ M+ G VT LVD
Sbjct: 241 ALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVD 300
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
GLC +G+ +A L + + GV P Y L++ L +L ++ E+ +G +
Sbjct: 301 GLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVM 360
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
++ T L++ L + K EA ++ + I P+ VT+ L++ C G A+++
Sbjct: 361 DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L K + P+ +T+ +++G + + + + +M D G P++ TY + +DG
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDG 476
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 4/300 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ Y VL++ + D A +M V P+VVTF+ +I+G + A
Sbjct: 395 PNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADY 454
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M++ G PNVV++ TLI GFF + + +++ +M+ G E ++ + LV+GL
Sbjct: 455 MRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A L D RG+L +Y L++ L GN A +V EL +K P +
Sbjct: 515 NGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV 574
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
I L L K EA +++M G+ PD T+N ++ C G+T A L+LL
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA--LKLLKE 632
Query: 428 TK--GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K + P+ +TY LV G K+ + L+NEM GF P T+ + S +R+
Sbjct: 633 MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRR 692
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 3/293 (1%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRV--KPDVVTFNILISGFCRNKKFDLALGL 247
V++ L+ G + +A + +VR R DVV +N LI G+C+ + AL +
Sbjct: 151 VTVSTALV-GLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAV 209
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M +G +VV +N+L+ GFF D + + M G E + VT L+ C
Sbjct: 210 VERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCK 269
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L R GVLP LV+ LC +G A + E+ K G P+ +
Sbjct: 270 GKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVT 329
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+ L + R+G E+ GL+ +M+ G++ D V + L++ L G+ +A + A
Sbjct: 330 YCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQ 389
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P+ +TY +LV + R E ++ +M ++ IP++ T++S ++GL
Sbjct: 390 SDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 156/364 (42%), Gaps = 38/364 (10%)
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSV---SIYNVLINGFVKCREFDKALGFYD 214
+F V++ V R N + EA+ K +D R + Y L++G K A
Sbjct: 502 NFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQ 561
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++ + PD V +N+ I+ C KF A +EMR G P+ ++NT+I E
Sbjct: 562 ELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREG 621
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K + + + EM + + +T LV GL G V KA L+ + + G P +
Sbjct: 622 KTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQ 681
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ G + LE+ + + G + TL+ L A+ ++++ML
Sbjct: 682 RVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTR 741
Query: 395 GILPDSVTFNCLLEDLC-----------------------------------DVGRTVDA 419
GI PD++TFN L+ C GR +A
Sbjct: 742 GIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 801
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
D + GL+P+ +TY ILV+GY +++ + E L EM+ +GFIP +TYNS M
Sbjct: 802 DTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861
Query: 480 LSNA 483
+ A
Sbjct: 862 FAKA 865
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 112/233 (48%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+++YN L++ A D M+ + PD +TFN LI G C++ D A ++
Sbjct: 712 ITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYA 771
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M +G +PN+ +FNTL+ G + E + +M ++G E +++T +ILV G +
Sbjct: 772 QMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKS 831
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++A L + +G +PK Y L+ G A E+ E+ ++G L +
Sbjct: 832 NKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 891
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
L+ G +LR G+E L++ M + G P T + + G T +A RL
Sbjct: 892 ILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRL 944
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 4/302 (1%)
Query: 188 PSVSIYNVLINGFVKCRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLAL 245
P + YN +I +CRE KAL M R+ +KP+++T+ L+ G A
Sbjct: 605 PDQATYNTMIAA--RCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAK 662
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
L EM G P ++ +++ G R+ D + + M+ G LV L
Sbjct: 663 FLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVL 722
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C G A ++ + RG+ P + L+ C + A + ++ +G P++
Sbjct: 723 CCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNI 782
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
TL+ GL + EA ++ M K G+ P+++T++ L+ V+A RL
Sbjct: 783 ATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCE 842
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG P TY+ L+S + + + + L +EM G + +TY+ ++G S R
Sbjct: 843 MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRN 902
Query: 486 SV 487
+
Sbjct: 903 GI 904
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 4/268 (1%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V D V++NI ++ LA + EM ++G + + V+ +T + G E
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 281 NMAYEMIELGCEFSS---VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+A EM+ G V L+DG C + A +V + +GV Y LV
Sbjct: 171 ALA-EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
G+A ALEVV+ + G P+V+ T LI + + EA L E M++ G+L
Sbjct: 230 AGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD VT + L++ LC G+ +A L G+ P+ +TY L+ + R E L
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ EM+ G + DL Y + MD L K
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGK 377
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ +N L+ G +A M + ++P+ +T++IL++G+ + AL L
Sbjct: 780 PNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRL 839
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ EM KG P ++N+L+ F ++ + EM G +S T +IL++G
Sbjct: 840 YCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 899
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
++ L+ D G P + G G A ++ L+K
Sbjct: 900 LRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ + A R+ + M+K + P+ Y++L+ G+ K +AL Y M
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKK-VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 843
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V P T+N L+S F + + A LF EM+ +G +++ L+ G+ R
Sbjct: 844 VSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNG 903
Query: 277 DEGVNMAYEMIELG 290
E + +M ELG
Sbjct: 904 IEVRILLKDMKELG 917
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 147/328 (44%), Gaps = 5/328 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFY 213
+ + +N F+K + FE + K DG +P V +YN +I F D+A+
Sbjct: 517 KTYSMLINGFLKLKDWANAFAIFEDVVK--DGLKPDVVLYNNIIRAFCGMGTMDRAICMV 574
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M ++R +P TF +I GF R + AL +F MR GC P V +FN LI G +
Sbjct: 575 KEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEK 634
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
R+ ++ + + EM G + T ++ G G KA E G+ + Y
Sbjct: 635 RQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTY 694
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKML 392
L++ C G AL V E+ + N+P + LI+G R EA+ LM++M
Sbjct: 695 EALLKACCKSGRMQSALAVTKEMSAQ-NIPRNTFVYNILIDGWARRGDVWEAADLMQQMK 753
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+ G+ PD T+ + C G + A ++ T G+ P+ TY L+ G+ R + +
Sbjct: 754 QGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPE 813
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ EM G PD A Y+ M L
Sbjct: 814 KALRCFQEMKLAGLKPDKAVYHCLMTAL 841
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 155/336 (46%), Gaps = 1/336 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+H ++ + L FE +++ PSV Y LIN + K + KAL
Sbjct: 448 IYHTMMDGYTMVGNEEKCLTVFERLKE-CGFAPSVVSYGCLINLYAKVGKISKALEVSKM 506
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +K ++ T+++LI+GF + K + A +F ++ + G P+VV +N +IR F G
Sbjct: 507 MESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGT 566
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + M EM + +S T ++ G G + +A ++ R G +P +
Sbjct: 567 MDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNA 626
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L + A+E++DE+ G P+ TT++ G L +A K+ EG
Sbjct: 627 LILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEG 686
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D T+ LL+ C GR A + S + + + Y+IL+ G+ R E
Sbjct: 687 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAA 746
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+L+ +M G PD+ TY S+++ A +R ++
Sbjct: 747 DLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASK 782
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 142/326 (43%), Gaps = 8/326 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R F ++ F +A M L F+ MR+ P+V +N LI G V+ R+ +KA+ D
Sbjct: 587 RTFMPIIHGFARAGEMKRALDVFDMMRR-SGCIPTVHTFNALILGLVEKRQMEKAIEILD 645
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M V P+ T+ ++ G+ A F ++R++G +V ++ L++
Sbjct: 646 EMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSG 705
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + + EM ++ IL+DG G V +A +L+ + GV P Y
Sbjct: 706 RMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYT 765
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+ C G+ A ++++E+ G P+V TTLI G R +A ++M
Sbjct: 766 SFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLA 825
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDAD-RLRLLASTKGLDPDG----MTYHILVSGYTREN 449
G+ PD ++CL+ L +A R +L+ K + G M + S R+
Sbjct: 826 GLKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGTAVHWSKSLRKI 885
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNS 475
R GE + E L + F PD +S
Sbjct: 886 ERTGGE--LTEALQKTFPPDWNMRHS 909
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 148/337 (43%), Gaps = 13/337 (3%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
R + V+ + + M+ FE+MR + I+ P+ +Y LI+ + R+ ++AL
Sbjct: 307 REYGLMVSYYARRGDMHRARQTFESMRARGIE--PTSHVYTSLIHAYAVGRDMEEALSCA 364
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M + V+ +VT++I++ GF + D A F+E +++ + N + + +I +
Sbjct: 365 RKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQT 424
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+ + EM G + ++DG G K + G P Y
Sbjct: 425 CNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSY 484
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L+ G ALEV + G ++ + LI G +L+ A + E ++K
Sbjct: 485 GCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVK 544
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD-----PDGMTYHILVSGYTRE 448
+G+ PD V +N ++ C +G T+D R + K + P T+ ++ G+ R
Sbjct: 545 DGLKPDVVLYNNIIRAFCGMG-TMD----RAICMVKEMQKERHRPTSRTFMPIIHGFARA 599
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
K ++ + M G IP + T+N+ + GL R+
Sbjct: 600 GEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQ 636
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 7/175 (4%)
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
N V+ A E + SRR +Y +V G+ A + + + +G P+
Sbjct: 290 NWQDVVSAFERIKKPSRR-------EYGLMVSYYARRGDMHRARQTFESMRARGIEPTSH 342
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI R EA KM +EG+ VT++ ++ +G ADR A
Sbjct: 343 VYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEA 402
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ + + Y ++ Y + + E LV EM EG + Y++ MDG +
Sbjct: 403 KDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYT 457
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 184 IDGRPSVSIYNVLINGFVKCREFDKAL---------GFYDR-------MVRDRVKPDVVT 227
+D + +YN ++NG V + DKA + D MV++ V+P +
Sbjct: 360 LDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTS 419
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F+I+I G C K DLAL LFR+M GC NV+ +N LI + +E + EM
Sbjct: 420 FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMK 479
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + T + LC V A ++V + G P Y LV++LC +
Sbjct: 480 GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSA 539
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A + E+ ++G LP ++A + I+G +++ +A + + G PD V +N L+
Sbjct: 540 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 599
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
C V R +A + KGL P +TY++L+ G+ + + + ++ M+ +
Sbjct: 600 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 659
Query: 468 PDLATYNSYMDGLSNA 483
P++ TY + +DGL NA
Sbjct: 660 PNVITYTTLIDGLCNA 675
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 182/456 (39%), Gaps = 96/456 (21%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T ++++ +S +F + SV N I DG + V F K
Sbjct: 193 DKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV---DG--------HVLSILVLTFSKC 241
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
++ E M L R + + VLI+GFV+ DKAL + +M + PDV
Sbjct: 242 GEVDKAFELIERMEDL-GIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSV 300
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNV--------------------------- 260
++ LI G C K+ + AL L EM+E G +P++
Sbjct: 301 YDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDL 360
Query: 261 ------VSFNTLIRGFFGERKFDEGVNM----------------AYEMIELGCEFSSVTC 298
+ +N+++ G + D+ + + M++ + +
Sbjct: 361 DTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSF 420
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK------------------- 339
I++DGLCN G++ A L D R G Y L++K
Sbjct: 421 SIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG 480
Query: 340 ----------------LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
LC + AL++V E+ G+ P + T L++ L + ++ E
Sbjct: 481 SGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAE 540
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A + +M++EG LPD V ++ ++ + A + +G PD + Y+ L++
Sbjct: 541 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 600
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G+ + R E ++++EM+ +G +P + TYN +DG
Sbjct: 601 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDG 636
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ I+GFVK + D+AL + + PDVV +N LI+GFC+ K+ A +
Sbjct: 555 PDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDI 614
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM KG P+VV++N LI G+ D+ + M+ E + +T L+DGLCN
Sbjct: 615 LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCN 674
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
GR A L + +G P + L+ LC G AL E+ ++ P I
Sbjct: 675 AGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGER-ETPDTIV 733
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
LI + A ++++M+ +G PD + N
Sbjct: 734 YVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKN 770
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 57/360 (15%)
Query: 115 IVRSLASSYRFSELHSVLNFISAN---PCPCSNDGIFSCPEMERIFHFAVNAFVKANRMN 171
++ L++S R E + +L + + P +++ IF C R
Sbjct: 458 LIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGC----------------LCRRE 501
Query: 172 DGLLAFEAMRKL-IDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
D A + +R++ + G P + Y +L+ K + +A F MVR+ PD+V ++
Sbjct: 502 DVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYS 561
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
I GF + K D AL +FR++ +G P+VV++NTLI GF
Sbjct: 562 AAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGF------------------- 602
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
C RV +A +++ + +G++P Y L++ C G+ A
Sbjct: 603 ----------------CKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQA 646
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+ + K P+VI TTLI+GL + +A L +M +G P+ ++F L+
Sbjct: 647 FHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG 706
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC G DA L + PD + Y L++ + ++ EM+ +G PD
Sbjct: 707 LCKCGWP-DAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPD 765
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 168/423 (39%), Gaps = 44/423 (10%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
+ F WAS F H+ T+ + L+ + + + L + I + C S
Sbjct: 112 YRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSPG------- 164
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKAL 210
A+ A K+ ++ L ++++ D P ++ + R+FDKAL
Sbjct: 165 -------ALGAISKSGSID---LVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKAL 214
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
++ + R D +IL+ F + + D A L M + G N +F LI GF
Sbjct: 215 SVFNE-IYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGF 273
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + D+ + + +M + G + L+ GLC + + KA L+ + G+ P D
Sbjct: 274 VRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDP-D 332
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ C E I + + L ++ +++ GL + +A L+
Sbjct: 333 IQILSKLIPYCSE-EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXA 391
Query: 391 ----------------MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
M+KE + P + +F+ +++ LC+ G+ A L G +
Sbjct: 392 MTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQN 451
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM------DGLSNARKSVR 488
+ Y+ L+ + NR +E L+ EM GF P T+NS + ++ A VR
Sbjct: 452 VLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVR 511
Query: 489 QTR 491
+ R
Sbjct: 512 EMR 514
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 1/339 (0%)
Query: 142 CSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV 201
C+ +F + + +N+ + + ++ + M KL +P + LING
Sbjct: 109 CNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKL-GIQPDSVTFTTLINGLC 167
Query: 202 KCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVV 261
+A+ ++ M P+ VTF IL+ C+ A +F M EKG PN+
Sbjct: 168 NEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIY 227
Query: 262 SFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
++N L+ G+ + ++ + M+ GC S + IL++G C R+ +A L+
Sbjct: 228 TYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQM 287
Query: 322 SRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
S + ++P Y L++ LC + A E+ ++ G LP++ + L++GL +
Sbjct: 288 SEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHL 347
Query: 382 VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHIL 441
EA L+ M + + PD V +N L++ + G+ A L G+ P TY+I+
Sbjct: 348 EEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIM 407
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G +E E L +M D+GF+PD +YN + G
Sbjct: 408 IKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGF 446
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 1/316 (0%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D + +F M + + RPS + K +++ + ++M V + T N
Sbjct: 67 IDDAMASFYRMIHM-NPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLN 125
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
ILI+ CR A+ + +M + G P+ V+F TLI G E + E V + EM
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
++VT ILVD LC +G V +A + + +GV P + Y L+ C A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+V + + KG PSV + + LI G + R+ EA L+ +M ++ ++P++VT+N L++
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
LC ++A L + G+ P+ TY IL+ G + +E L+ M + PD
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365
Query: 470 LATYNSYMDGLSNARK 485
+ YN + G+ A K
Sbjct: 366 IVLYNILIQGMFIAGK 381
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 1/322 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N R+ + + F M D P+ + +L++ K +A ++ M
Sbjct: 159 FTTLINGLCNEGRIKEAVELFNEMAGR-DAMPNTVTFTILVDVLCKKGMVSEARCVFETM 217
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+P++ T+N L++G+C + + A +F M KGC P+V S++ LI G+ R+
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRI 277
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + +M E ++VT L+ GLC+ +L+A EL G+LP Y L
Sbjct: 278 DEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSIL 337
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC G+ AL+++ + ++ P ++ LI+G+ K A L K+ GI
Sbjct: 338 LDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGI 397
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P T+N +++ L G + +A +L G PD +Y++++ G+ +
Sbjct: 398 RPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQ 457
Query: 457 LVNEMLDEGFIPDLATYNSYMD 478
L++EM+ F D +T+ +D
Sbjct: 458 LIDEMVGRRFSADSSTFKMLLD 479
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 137/286 (47%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI GF++ D+A ++MV PD +T+N++I G C+N + AL L +M G
Sbjct: 171 LIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG 230
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C+P+ +++N++IR F + F++ VN + + GC +T +L++ +C +A
Sbjct: 231 CSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARAL 290
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
E++ D + G P Y LV +G V+ L G P+ + TLI L
Sbjct: 291 EVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSL 350
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
E +++ M + P VT+N LL LC G A T+ PD
Sbjct: 351 INHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDI 410
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+TY+ L+SG +E EG L+N ++ P L TYN +DGL+
Sbjct: 411 ITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLA 456
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 119/263 (45%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+ D +T N ++ C K +A L M K P+ S LIRGF + DE
Sbjct: 126 VQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEAC 185
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+M+ G ++T +++ GLC GR+ A +LV D S G P Y ++ L
Sbjct: 186 KTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCL 245
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+GN A+ + +KG P +I T LIE + + A ++E M EG PD
Sbjct: 246 FDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDI 305
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ G+ D + L + G+ P+ +TY+ L+ E ++++
Sbjct: 306 VTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKI 365
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M + P TYN ++GL +
Sbjct: 366 MNETSSPPTHVTYNILLNGLCKS 388
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YN LI+ + +D+ M P VT+NIL++G C++ D A+
Sbjct: 337 QPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAIS 396
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ M + C+P+++++NTL+ G E DEG+ + ++ C VT I++DGL
Sbjct: 397 FYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLA 456
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + A EL + +G++P + + L C A E++ E+ K
Sbjct: 457 RLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNT 516
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
A +I GL R +K A +++ M+K PD ++ L++ + D G +A+ L
Sbjct: 517 AYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDL 572
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y VLI K +AL + M + PD+VT+N L++ + K++ +
Sbjct: 268 PYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALV 327
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ G PN V++NTLI +DE ++ M E + VT IL++GLC
Sbjct: 328 ILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCK 387
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A P Y L+ LC EG +++++ L P ++
Sbjct: 388 SGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVT 447
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+I+GL RL A L ++M+ +GI+PD +T + L C + +A L S
Sbjct: 448 YNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMS 507
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K Y ++ G R+ + +++ M+ PD Y++ + +++
Sbjct: 508 MKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADG 563
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLK 393
++++LC G +A ++D + +K +P +CT LI G +RKG+ EA + KM+
Sbjct: 136 ILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGF--IRKGLVDEACKTLNKMVM 193
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS---------- 443
G +PD++T+N ++ LC GR A L S G PD +TY+ ++
Sbjct: 194 SGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQ 253
Query: 444 --GYTRENRRK-----------------------EGENLVNEMLDEGFIPDLATYNSYMD 478
+ R+ RK ++ +M EG PD+ TYNS ++
Sbjct: 254 AVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVN 313
Query: 479 GLSNARK 485
S K
Sbjct: 314 LTSKQGK 320
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + YN++I+G + + A YD MV + PD +T + L GFCR + + A L
Sbjct: 443 PGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATEL 502
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM K ++ +I G ++K D + + M++ C L+ + +
Sbjct: 503 LKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVAD 562
Query: 308 EGRVLKACELVIDFSRRGVLPKDF 331
G + +A +L + +L K+
Sbjct: 563 GGMLKEANDLHQTLIKWKILKKEI 586
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN L+NG V + A ++ M ++ PD VT+NI+I G+C+ K A+
Sbjct: 218 PSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEK 277
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
FR+M K P+ +++ TLI+ + ER FD +++ EM E G E + +++ GLC
Sbjct: 278 FRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCK 337
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + ++A + +++G N I ++D K G++
Sbjct: 338 QRKCMEAYAVFETMNQKGC----------------RANVAIYTALIDSYSKNGSME---- 377
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
EA L E+M EG PD+VT++ L+ LC GR D L
Sbjct: 378 ---------------EAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 422
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG+ + M Y L+ G + R ++ ENL EM ++G D YN+ +D L+ K
Sbjct: 423 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 480
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 7/338 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++F VN V + + FE M DG P YN++I G+ K + KA+ +
Sbjct: 223 YNFLVNGLVNSMFIESAEKVFEVM----DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKF 278
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M VKPD +T+ LI + FD L L+ EM E+G S++ +I G +
Sbjct: 279 RDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQ 338
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
RK E + M + GC + L+D G + +A L G P Y
Sbjct: 339 RKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTY 398
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
LV LC G +E+ D KG + + +LI+GL + + +A L E+M +
Sbjct: 399 SVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSE 458
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G DS +N +++ L G+ A L +G D T+ IL+ G +E++ +E
Sbjct: 459 KGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEE 518
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
++M+D+G P +A++ + GL K R +
Sbjct: 519 AIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACK 556
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ + K + + FE M + R +V+IY LI+ + K ++A+ ++RM
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMNQK-GCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +PD VT+++L++G C++ + D + LF R KG N + + +LI G +
Sbjct: 387 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 446
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ N+ EM E GC S ++D L G++ +A L G + + L
Sbjct: 447 EDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTIL 506
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L E A++ D++ KG P+V + L GL K A +++ + GI
Sbjct: 507 IDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGI 566
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+P++ F ++ LC R +A +L +G + G +L++
Sbjct: 567 IPET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINA 613
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+++I G K R+ +A ++ M + + +V + LI + +N + A+ LF M+
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G P+ V+++ L+ G + D+G+ + G +++ L+DGL GR+
Sbjct: 388 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 447
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L + S +G + Y +++ L G AL + + ++G +V T LI
Sbjct: 448 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 507
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + K EA +KM+ +GI P +F L LC G+ A ++ + G+
Sbjct: 508 DGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGII 567
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
P+ + +++ + R KE L + ++D G
Sbjct: 568 PE-TAFEDMINTLCKAQRIKEACKLADGIVDRG 599
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 157/325 (48%), Gaps = 5/325 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFY 213
++ +N NR + L M DG P V Y+ +INGF K + DK Y
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMAD--DGGDCPPDVVSYSTVINGFFKEGDLDKTYSTY 111
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M+ R+ P+VVT+N +I+ C+ + D A+ + M + G P+ +++N+++ GF
Sbjct: 112 NEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSS 171
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E + +M G E VT L+D LC GR +A ++ ++RG+ P+ Y
Sbjct: 172 GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTY 231
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ +G ++D + + G P+ + L+ + K EA + KM +
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ 291
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ P++VT+ ++ LC GR DA +GL P + Y+ L+ G N+ +
Sbjct: 292 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 351
Query: 454 GENLVNEMLDEGFIPDLATYNSYMD 478
E L+ EMLD G + +NS +D
Sbjct: 352 AEELILEMLDRGICLNTIFFNSIID 376
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R + F++M K +P ++ Y L+ G+ + G D M
Sbjct: 196 YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLM 254
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR+ + P+ F+IL+ + + +K + A+ +F +MR++G NPN V++ +I +
Sbjct: 255 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 314
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + +MI+ G ++ L+ GLC + +A EL+++ RG+ + +
Sbjct: 315 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG + ++ D + + G P +I +TLI+G K EA+ L+ M+ G+
Sbjct: 375 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT++ L+ C + R DA L + G+ PD +TY+I++ G + R +
Sbjct: 435 KPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 494
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L + G +L+TYN + GL
Sbjct: 495 LYVGITKSGRQLELSTYNIILHGL 518
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 36/365 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + A KA ++ + M K P YN +++GF + +A+ F +M
Sbjct: 126 YNSIIAALCKAQTVDKAMEVLTTMVK-SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM 184
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
D V+PDVVT+N L+ C+N + A +F M ++G P + ++ TL++G+ +
Sbjct: 185 RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 244
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E + M+ G + ILV + +V +A + ++G+ P Y +
Sbjct: 245 VEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAV 304
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A+ +++ +G P I +LI GL K A L+ +ML GI
Sbjct: 305 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRL---------------------------------R 423
+++ FN +++ C GR +++++L +
Sbjct: 365 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424
Query: 424 LLAS--TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
LLAS + G+ PD +TY L++GY + +R K+ L EM G PD+ TYN + GL
Sbjct: 425 LLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLF 484
Query: 482 NARKS 486
R++
Sbjct: 485 QTRRT 489
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 40/367 (10%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFD 207
CP + +N F K ++ + +++D R P+V YN +I K + D
Sbjct: 84 CPPDVVSYSTVINGFFKEGDLDK---TYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVD 140
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
KA+ MV+ V PD +T+N ++ GFC + + A+ ++MR G P+VV++N+L+
Sbjct: 141 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 200
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL--------------- 312
+ E + M + G + T L+ G +G ++
Sbjct: 201 DYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 260
Query: 313 -----------------KACELVIDFSR---RGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
K E ++ FS+ +G+ P Y ++ LC G A+
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++ +G P I +LI GL K A L+ +ML GI +++ FN +++ C
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR +++++L L G+ PD +TY L+ GY + E L+ M+ G PD T
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 473 YNSYMDG 479
Y++ ++G
Sbjct: 441 YSTLING 447
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 144/308 (46%), Gaps = 8/308 (2%)
Query: 186 GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD--RVKPDVVTFNILISGFCRNKKFDL 243
G P V YN+L+NG +AL M D PDVV+++ +I+GF + D
Sbjct: 47 GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK 106
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVD 303
+ EM ++ +PNVV++N++I + D+ + + M++ G +T +V
Sbjct: 107 TYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 166
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C+ G+ +A + GV P Y L++ LC G A ++ D + K+G P
Sbjct: 167 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 226
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ TL++G VE GL++ M++ GI P+ F+ L +C + +
Sbjct: 227 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL---VCAYAKQEKVEEAM 283
Query: 424 LLAS---TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ S +GL+P+ +TY ++ + R ++ +M+DEG P YNS + GL
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 343
Query: 481 SNARKSVR 488
K R
Sbjct: 344 CTCNKWER 351
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVSFNTLIRGF 270
+D ++R R PDV ++NIL++G C + AL L M + G C P+VVS++T+I GF
Sbjct: 40 FDELLR-RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F E D+ + EM++ + VT ++ LC V KA E++ + GV+P
Sbjct: 99 FKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 158
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +V C G A+ + ++ G P V+ +L++ L + + EA + +
Sbjct: 159 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 218
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M K G+ P+ T+ LL+ G V+ L L G+ P+ + ILV Y ++ +
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278
Query: 451 RKEGENLVNEMLDEGFIPDLATYNS 475
+E + ++M +G P+ TY +
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGA 303
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 163/365 (44%), Gaps = 13/365 (3%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TT+ +++ A+ E+H +L+ + N GI P +F V A+ K +
Sbjct: 229 TTYGTLLQGYATKGALVEMHGLLDLMVRN-------GIH--PN-HYVFSILVCAYAKQEK 278
Query: 170 MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+ + +L F MR+ G P+ Y +I K + A+ ++++M+ + + P + +
Sbjct: 279 VEEAMLVFSKMRQ--QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 336
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N LI G C K++ A L EM ++G N + FN++I E + E + M+
Sbjct: 337 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 396
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+G + +T L+DG C G++ +A +L+ G+ P Y L+ C
Sbjct: 397 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKD 456
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
AL + E+ G P +I +++GL + R+ A L + K G + T+N +L
Sbjct: 457 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILH 516
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC T DA R+ L + T++I++ + R E ++L G +P
Sbjct: 517 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 576
Query: 469 DLATY 473
+ TY
Sbjct: 577 NYWTY 581
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 5/320 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + K+ R+ D +L FE M ID P +YN LI+G C ++++A
Sbjct: 301 YGAVIGILCKSGRVEDAMLYFEQM---IDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 357
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + + + FN +I C+ + + LF M G P++++++TLI G+
Sbjct: 358 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 417
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K DE + M+ +G + VT L++G C R+ A L + GV P Y
Sbjct: 418 KMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYN 477
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ L A E+ + K G + ++ GL + + +A + + +
Sbjct: 478 IILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLM 537
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ ++ TFN +++ L VGR +A L + S+ GL P+ TY ++ + +E
Sbjct: 538 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 597
Query: 455 ENLVNEMLDEGFIPDLATYN 474
+ L M D G D N
Sbjct: 598 DQLFLSMEDNGCTVDSGMLN 617
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGLRRLRK 380
RRG+ P F Y L+ LC E + ALE++ + G P V++ +T+I G +
Sbjct: 45 RRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD 103
Query: 381 GVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK-GLDPDGMTYH 439
+ +ML + I P+ VT+N ++ LC +TVD L K G+ PD MTY+
Sbjct: 104 LDKTYSTYNEMLDQRISPNVVTYNSIIAALCK-AQTVDKAMEVLTTMVKSGVMPDCMTYN 162
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+V G+ + KE + +M +G PD+ TYNS MD L
Sbjct: 163 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+S YN++++G K + D AL + + +K + TFNI+I + + D A LF
Sbjct: 508 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 567
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
G PN ++ + G+ +E + M + GC S +V L G
Sbjct: 568 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627
Query: 310 RVLKA 314
+ +A
Sbjct: 628 EITRA 632
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 146/294 (49%), Gaps = 2/294 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF + ++I + P V IYN+LIN K +A M ++ +KP VVT++ L+
Sbjct: 204 AFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMD 263
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G+C + A +F M + G NPNV S+N +I G ++ DE +N+ EM+
Sbjct: 264 GYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 323
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+VT L+DGLC GR+ A L+ + RG Y L++ LC N A +
Sbjct: 324 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 383
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ ++G P++ T LI+GL + + A L + +L +G D T+ ++ LC
Sbjct: 384 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE 443
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
G +A ++ G P+ +T+ I++ ++ + E L++EM+ +G +
Sbjct: 444 GMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 159/326 (48%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ +N F +M +F + K++ +P N L+ G E K+L F+D
Sbjct: 48 LNILINCFCHLGQMA---FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHD 104
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
++V + D V++ L++G C+ + A+ L R + ++ PNVV +NT+I G ++
Sbjct: 105 KVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDK 164
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+E ++ EM G ++T L+ G C G+++ A L+ + + + P + Y
Sbjct: 165 LVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYN 224
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC EGN A ++ + K+G P V+ +TL++G + + A + M++
Sbjct: 225 ILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM 284
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ ++N ++ LC R +A L K + PD +TY+ L+ G + R
Sbjct: 285 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 344
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
NL+NEM G D+ TY S +D L
Sbjct: 345 LNLMNEMHHRGQPADVVTYTSLLDAL 370
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 139/286 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y LI GF + A D M+ + P V +NILI+ C+ A L
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M ++G P VV+++TL+ G+ + + + M+++G + + I+++GLC
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A L+ + + ++P Y L++ LC G AL +++E+ +G V+
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+L++ L + + +A+ L KM + GI P T+ L++ LC GR +A L
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
KG D TY +++SG +E E + ++M D G IP+ T+
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 147/313 (46%), Gaps = 7/313 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ +NA K + + M K +G +P V Y+ L++G+ E A +
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTK--EGIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV+ V P+V ++NI+I+G C+ K+ D A+ L REM K P+ V++N+LI G
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +N+ EM G VT L+D LC + KA L + RG+ P + Y
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G A E+ L KG V T +I GL + EA + KM
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G +P++VTF ++ L + A++L KGL + V+ +N +
Sbjct: 460 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL----LVLDFKVADVFVQNENDKA 515
Query: 455 ENLVNEMLDEGFI 467
E L++EM+ +G +
Sbjct: 516 EKLLHEMIAKGLL 528
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 133/294 (45%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+V +YN +I+G K + ++A Y M + PD +T+ LI GFC + A
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFS 206
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM K NP V +N LI E E N+ M + G + VT L+DG C
Sbjct: 207 LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYC 266
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G V A ++ + GV P + Y ++ LC A+ ++ E+ K +P +
Sbjct: 267 LVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 326
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+LI+GL + + A LM +M G D VT+ LL+ LC A L +
Sbjct: 327 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+G+ P TY L+ G + R K + L +L +G D+ TY + GL
Sbjct: 387 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 440
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 35/336 (10%)
Query: 183 LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
L+ P + +N ++ K +++ A+ +M ++ + VT NILI+ FC +
Sbjct: 3 LVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFF--GERK-----FDEGVNMAYEM--IELG--- 290
+ + ++ + G P+ ++ NTL++G GE K D+ V ++M + G
Sbjct: 63 FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122
Query: 291 ---CEFSSVTCEI--------------------LVDGLCNEGRVLKACELVIDFSRRGVL 327
C+ C + ++DGLC + V +A +L + RG+
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L+ C G A ++DE+ K P V LI L + EA L
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ M KEGI P VT++ L++ C VG +A ++ G++P+ +Y+I+++G +
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
R E NL+ EML + +PD TYNS +DGL +
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 338
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 147/328 (44%), Gaps = 5/328 (1%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFY 213
+ + +N F+K + FE K DG +P V +YN +I F D+A+
Sbjct: 485 KTYSMLINGFLKLKDWANAFSVFEDFTK--DGLKPDVVLYNNIITAFCGMSNMDRAICMV 542
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+M ++R +P TF +I GF R + AL +F MR GC P V ++N LI G +
Sbjct: 543 KQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEK 602
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
RK + V + +M G + T L+ G + G KA + G+ + Y
Sbjct: 603 RKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTY 662
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLP-SVIACTTLIEGLRRLRKGVEASGLMEKML 392
L++ C G AL V E+ K N+P + LI+G R EA+ LM++M
Sbjct: 663 EALLKSCCKSGRMQSALAVTKEMSAK-NIPRNTFVYNILIDGWARRGDVWEAADLMQQMR 721
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
KEG+LPD T+ + C G A + G+ P+ TY L++G+ R + +
Sbjct: 722 KEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPE 781
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + EM PD A Y+ M L
Sbjct: 782 KALSCFEEMKLAELKPDKAAYHCLMTSL 809
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 1/328 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+H ++ + L+ F+ +++ PSV Y LIN + K + KAL
Sbjct: 416 IYHTMMDGYTMIGNEEKCLIVFDRLKEC-GFSPSVISYGCLINLYTKIGKVSKALQISKM 474
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +K ++ T+++LI+GF + K + A +F + + G P+VV +N +I F G
Sbjct: 475 MKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSN 534
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + M +M + ++ T ++ G G + +A E+ R G +P Y
Sbjct: 535 MDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNA 594
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L + A+ ++D++ G P+ TTL++G L +A + EG
Sbjct: 595 LILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEG 654
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D T+ LL+ C GR A + S K + + Y+IL+ G+ R E
Sbjct: 655 LEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAA 714
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+L+ +M EG +PD+ TY S+++ A
Sbjct: 715 DLMQQMRKEGVLPDIHTYTSFVNACCKA 742
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 145/334 (43%), Gaps = 5/334 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ V + + M+ FE+M+ + I+ PS +Y+ LI+ + R+ ++AL +
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIE--PSSHVYSSLIHAYAVGRDMEEALHCVRK 334
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + ++ +VT++I++ GF + K D A F+E +EK + N V++ ++I
Sbjct: 335 MKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCN 394
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYF 334
D + EM G + ++DG G K C +V D + G P Y
Sbjct: 395 MDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEK-CLIVFDRLKECGFSPSVISYG 453
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ G AL++ + G ++ + LI G +L+ A + E K+
Sbjct: 454 CLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD 513
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ PD V +N ++ C + A + + P T+ ++ G+ R +
Sbjct: 514 GLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRA 573
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + M G IP + TYN+ + GL RK +
Sbjct: 574 LEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAK 607
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ +++S S R +V +SA + P +++ ++ + +
Sbjct: 658 DVYTYEALLKSCCKSGRMQSALAVTKEMSAK----------NIPRNTFVYNILIDGWARR 707
Query: 168 NRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+ + + MRK +G P + Y +N K + KA M +KP++
Sbjct: 708 GDVWEAADLMQQMRK--EGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLK 765
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG------V 280
T+ LI+G+ R + AL F EM+ P+ +++ L+ F + +
Sbjct: 766 TYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSYVYSGLL 825
Query: 281 NMAYEMIE 288
++ EMIE
Sbjct: 826 SVCREMIE 833
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ V+ R P +Y +V+ G+ A + + + +G PS ++LI
Sbjct: 260 QAVVTAFERIKKPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAY 319
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R EA + KM +EGI VT++ ++ +G+ AD A K +
Sbjct: 320 AVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNA 379
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+TY ++ + + E LV EM +G + Y++ MDG +
Sbjct: 380 VTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYT 425
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 150/295 (50%), Gaps = 4/295 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y +LI + D+A+ D M ++PDV +N +I CR D A +
Sbjct: 157 PTVVTYTILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEV 215
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ KG +V+++N L+R + K++ G + +M+ GCE + VT +L+ LC
Sbjct: 216 ISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCR 275
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G+V + L+ D ++G+ P + Y L+ LC EG +A+EV+D + G +P ++
Sbjct: 276 DGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVN 335
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T++ L + ++ EA + EK+ + G P++ ++N + L G V A + +L
Sbjct: 336 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGM-ILEM 394
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEG-ENLVN-EMLDEGFIPDLATYNSYMDGL 480
+DPD + Y+ L+S R+ E E LV+ EM P + +YN + GL
Sbjct: 395 LDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGL 449
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 1/280 (0%)
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
A DRM PD+VT+NILI C AL ++ ++ NP VV++ LI
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
+ DE + + EM E+ + ++ +C EG V +A E++ S +G
Sbjct: 168 ATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYAL 226
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y L+ L +G E++ ++ KG +V+ + LI L R K E GL+
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLL 286
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
+ M K+G+ PD ++ L+ LC GR A + + + G PD + Y+ +++ ++
Sbjct: 287 KDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 346
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
R E ++ ++ + G P+ ++YN+ L ++ VR
Sbjct: 347 KRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVR 386
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 129/299 (43%), Gaps = 41/299 (13%)
Query: 184 IDGRPSVSIYNVLINGFVKCRE--FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
I+ +P V YN +I CRE D+A + DV+T+NIL+ K+
Sbjct: 188 INLQPDVFPYNSII---XMCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKW 244
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ L +M KGC NVV+++ LI + K +EGV + +M + G E + L
Sbjct: 245 EAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPL 304
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ LC EGRV A E++ G +P +Y ++ LC + A AL + ++L + G
Sbjct: 305 IAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGC 364
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKML------------------KEGIL------ 397
P+ + T+ L V A G++ +ML ++G++
Sbjct: 365 SPNASSYNTVFSALGSSGHKVRALGMILEMLDXVDPDVIAYNSLISCLCRDGMVDEAIEL 424
Query: 398 ------------PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
P V++N +L LC VGR DA + KG P+ TY L+ G
Sbjct: 425 LVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEG 483
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 140/268 (52%), Gaps = 9/268 (3%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
FE M ++ +V Y+VLI+ + + ++ +G M + ++PD ++ LI+
Sbjct: 247 GFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIA 306
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C+ + DLA+ + M GC P++V++NT++ +++ DE +++ ++ E+GC
Sbjct: 307 VLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 366
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV- 352
++ + + L + G ++A ++++ V P Y L+ LC +G A+E+
Sbjct: 367 NASSYNTVFSALGSSGHKVRALGMILEM-LDXVDPDVIAYNSLISCLCRDGMVDEAIELL 425
Query: 353 VD-ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
VD E+ PSV++ ++ GL R+ + +A+ ++ M+ +G LP+ T+ L+E +
Sbjct: 426 VDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIG 485
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYH 439
G DA R LA+T ++ D ++ H
Sbjct: 486 FGGWLNDA---RDLATTL-VNMDAISEH 509
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 96 FAWASTIDS--FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM 153
F S+I S + D T+ ++RSL + ++ +++ + A C +
Sbjct: 213 FEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEAN---------- 262
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+ +++ + ++ +G+ + M+K G P Y+ LI K D A+
Sbjct: 263 VVTYSVLISSLCRDGKVEEGVGLLKDMKK--KGLEPDGYCYDPLIAVLCKEGRVDLAIEV 320
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN------------- 259
D M+ D PD+V +N +++ C+ K+ D AL +F ++ E GC+PN
Sbjct: 321 LDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGS 380
Query: 260 ---------------------VVSFNTLIRGFFGERKFDEGVNMA--YEMIELGCEFSSV 296
V+++N+LI + DE + + EM C+ S V
Sbjct: 381 SGHKVRALGMILEMLDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVV 440
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ I++ GLC GRV A E++ +G LP + Y L+E +
Sbjct: 441 SYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGI 484
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 167/372 (44%), Gaps = 13/372 (3%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFH-FAVNAFVKANR 169
++ +R L + RF E + +L + + C P++ + H + A R
Sbjct: 250 SYTICIRVLGQAARFDEAYQILGKMEDSGCK---------PDV--VTHTVVIQVLCDAGR 298
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
++D F M K D +P Y L++ + + ++ MV D ++V++
Sbjct: 299 LSDAKDVFWKM-KASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYT 357
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
++ C+ + D AL +F EM+EKG +P S+N+LI GF FD + + M
Sbjct: 358 AVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNAC 417
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
G + T + ++ G+ LKA + +G++P ++ L G G+A
Sbjct: 418 GPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMA 477
Query: 350 LEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
V EL G P I T +I+ + K EA M++ G +PD + N L++
Sbjct: 478 KRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDT 537
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
L G+ +A +L ++P TY+ L+SG RE + KE +L+ EM P+
Sbjct: 538 LYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPN 597
Query: 470 LATYNSYMDGLS 481
L TYN+ +D LS
Sbjct: 598 LITYNTVLDCLS 609
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 169/388 (43%), Gaps = 28/388 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSE-LHSVLNFISANPCPCSN-------DGIFSCPEMERIFHF 159
D+ T I+ S + E LH+V +I C +GI + +E+ F
Sbjct: 666 DYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEF 725
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
A N + +ND L +R L + ++ + L N F K LG
Sbjct: 726 AENIASRGILLNDFFLC-PLIRHLCKHKKALEAHQ-LFNKF-------KGLG-------- 768
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V ++N LI G D+A LF EM+ GC P+ ++N ++ + +E
Sbjct: 769 -VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEM 827
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM G E + VT ++ GL R+ +A +L + G P Y L++
Sbjct: 828 LRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 887
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
L G A + +E+ + G P+ L+ G R + EKM+++GI PD
Sbjct: 888 LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPD 947
Query: 400 SVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
++ L++ LC GR D R L GL+PD + Y++L+ G + R +E L
Sbjct: 948 IKSYTVLIDTLCTAGRLNDGLSYFRQLLEL-GLEPDLIIYNLLIDGLGKSERIEEAVCLF 1006
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKS 486
NEM +G +P+L TYNS + L A K+
Sbjct: 1007 NEMKKKGIVPNLYTYNSLILHLGKAGKA 1034
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 31/359 (8%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + V N ++ F M++L G P YN++++ K ++ L M
Sbjct: 776 YNSLIRGLVDENLIDIAEDLFTEMKRLGCG-PDEFTYNLILDAMGKSMRIEEMLRVQAEM 834
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
R + VT+N +ISG ++K+ + A+ L+ + +G +P ++ L+ G K
Sbjct: 835 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKM 894
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ N+ EM+E GC+ + IL++G G C++ +G+ P Y L
Sbjct: 895 VDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVL 954
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC G L +L + G P +I LI+GL + + EA L +M K+GI
Sbjct: 955 IDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGI 1014
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG-- 454
+P+ T+N L+ L G+ +A ++ KG P+ TY+ L+ GY+
Sbjct: 1015 VPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYA 1074
Query: 455 ---------------------ENLVN-------EMLDEGFIPDLATYNSYMDGLSNARK 485
ENL+N EM G PD TYN +D + + +
Sbjct: 1075 AYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMR 1133
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN LI VK +A+ Y MV D + P V T+++L+ F + + D L L EM
Sbjct: 181 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEME 240
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+G PNV S+ IR +FDE + +M + GC+ VT +++ LC+ GR+
Sbjct: 241 ARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLS 300
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A ++ P Y L++K G++ +E+ + + G ++++ T ++
Sbjct: 301 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVV 360
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ L ++ + EA + ++M ++GI P+ ++N L+ A L + G
Sbjct: 361 DALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 420
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+G T+ + ++ Y + + + M +G +PD+A N+ + L+ + +
Sbjct: 421 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGR 473
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 158/362 (43%), Gaps = 36/362 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ K + N+ F ++++ P+ YN L++G + + + + + M
Sbjct: 535 IDTLYKGGKGNEAWKLFHQLKEM-KIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSI 593
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+++T+N ++ +N + + A+G+ M EKGC P++ S+NT++ G E +F+E
Sbjct: 594 HPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAF 653
Query: 281 NMAYEMIELGCEFSSVTCEIL-----------------------------------VDGL 305
M +M ++ + C IL ++G+
Sbjct: 654 RMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGI 713
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
N+ V K+ E + + RG+L DF L+ LC A A ++ ++ G
Sbjct: 714 LNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKT 773
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ +LI GL A L +M + G PD T+N +L+ + R + R++
Sbjct: 774 GSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAE 833
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG + +TY+ ++SG + R ++ +L ++ EGF P TY +DGL A K
Sbjct: 834 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGK 893
Query: 486 SV 487
V
Sbjct: 894 MV 895
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 148/347 (42%), Gaps = 37/347 (10%)
Query: 176 AFEAMRKLI-DG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++ DG PSV Y+VL+ F K R+ D L + M VKP+V ++ I I
Sbjct: 197 AMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR 256
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE-------- 285
+ +FD A + +M + GC P+VV+ +I+ + + ++ ++
Sbjct: 257 VLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKP 316
Query: 286 ---------------------------MIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
M+ G + V+ +VD LC GR+ +A +
Sbjct: 317 DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVF 376
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G+ P+ + Y L+ ALE+ + + G P+ I +
Sbjct: 377 DEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 436
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
+ ++A E M +GI+PD N +L L GR A R+ G+ PD +TY
Sbjct: 437 GQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITY 496
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+++ ++ ++ E N ++M++ G +PD+ NS +D L K
Sbjct: 497 TMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGK 543
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 181/422 (42%), Gaps = 50/422 (11%)
Query: 98 WASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIF 157
W + D T++ ++ S + SV+ +A ND I S +
Sbjct: 307 WKMKASDQKPDRVTYITLLDKCGDS---GDSQSVMEIWNAMVADGYNDNIVS-------Y 356
Query: 158 HFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKAL------ 210
V+A + R+++ L F+ M+ K I P YN LI+GF+K FD+AL
Sbjct: 357 TAVVDALCQVGRLDEALAVFDEMKEKGIS--PEQYSYNSLISGFLKADMFDRALELFNHM 414
Query: 211 --------GF---------------------YDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G+ Y+ M + PDV N ++S R+ +
Sbjct: 415 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRL 474
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+A +F E+++ G +P+ +++ +I+ K DE +N +M+E GC + L
Sbjct: 475 GMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSL 534
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+D L G+ +A +L + P + Y L+ L EG + +++E+ +
Sbjct: 535 IDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIH 594
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P++I T+++ L + + A G++ M ++G PD ++N ++ L R +A R
Sbjct: 595 PPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFR 654
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE-MLDEGFIPDLATYNSYMDGL 480
+ K L PD T ++ + + KE + V E +L D ++++S M+G+
Sbjct: 655 M-FCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGI 713
Query: 481 SN 482
N
Sbjct: 714 LN 715
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 143/309 (46%), Gaps = 8/309 (2%)
Query: 157 FHFAVNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ VK+ R+ + L + M + P+ Y L++G +K + A ++
Sbjct: 846 YNTIISGLVKSKRLEQAIDLYYNLMSEGFS--PTPCTYGPLLDGLLKAGKMVDAENLFNE 903
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ KP+ +NIL++G + +F +M E+G NP++ S+ LI +
Sbjct: 904 MLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGR 963
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++G++ +++ELG E + +L+DGL R+ +A L + ++G++P + Y
Sbjct: 964 LNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNS 1023
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L G A A ++ +EL KG P+V LI G A + +
Sbjct: 1024 LILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGV 1083
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
L ++ + E+L ++ + A+ R +G PD TY++++ + R +E
Sbjct: 1084 SLKTALISGLVDENLINIAEGLFAEMKR-----RGCGPDQFTYNLILDAIGKSMRIEEML 1138
Query: 456 NLVNEMLDE 464
+ E+ ++
Sbjct: 1139 KVQEEIAED 1147
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 22/309 (7%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSE-LHSVLNFISA--NPCPCSNDGIFSCPEMERIFHFAV 161
+ + T+ I+ L S R + + N +S +P PC+ + +
Sbjct: 839 YESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCT-------------YGPLL 885
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
+ +KA +M D F M + +P+ +IYN+L+NG + +++MV +
Sbjct: 886 DGLLKAGKMVDAENLFNEMLEY-GCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGI 944
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
PD+ ++ +LI C + + L FR++ E G P+++ +N LI G + +E V
Sbjct: 945 NPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVC 1004
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ EM + G + T L+ L G+ +A ++ + +G P F Y L+
Sbjct: 1005 LFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYS 1064
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G+ A D + +L + + + E L + A GL +M + G PD
Sbjct: 1065 VSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINI-----AEGLFAEMKRRGCGPDQF 1119
Query: 402 TFNCLLEDL 410
T+N +L+ +
Sbjct: 1120 TYNLILDAI 1128
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 37/269 (13%)
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+D M + VK +V TF + SG A MRE G + N ++N LI F
Sbjct: 131 FDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIY-FLV 189
Query: 273 ERKFD-EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ FD E + + M+E G S T +L+ + F ++ +D
Sbjct: 190 KSGFDAEAMEVYKAMVEDGISPSVRTYSVLM----------------VSFGKK----RDV 229
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
D L +++E+ +G P+V + T I L + + EA ++ KM
Sbjct: 230 D---------------TVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKM 274
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
G PD VT +++ LCD GR DA + PD +TY L+
Sbjct: 275 EDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 334
Query: 452 KEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + N M+ +G+ ++ +Y + +D L
Sbjct: 335 QSVMEIWNAMVADGYNDNIVSYTAVVDAL 363
>gi|224064366|ref|XP_002301440.1| predicted protein [Populus trichocarpa]
gi|222843166|gb|EEE80713.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 205/474 (43%), Gaps = 81/474 (17%)
Query: 60 HLLTPTN------NQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFL 113
LLTPT +Q P + L K +P S+ H+ +
Sbjct: 7 RLLTPTQLSQILRSQKNPLTALQIFKDAKDKYP-----------------SYHHNGPVYA 49
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
++ L +S R +E+ V++ + + C C + +F A+ + A ++++
Sbjct: 50 TMISILGNSDRIAEMKEVIDQMRDDSCECKDS----------VFVTAIKTYASAGQISEA 99
Query: 174 LLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFY-DRMVRDRVKPDVVTFNI 230
+ F+ + K ++ S +N L+ VK + + A F+ + VK + N+
Sbjct: 100 VSLFKNIPKFNCVNWTES---FNTLLQILVKESKLETAHRFFLENSCGWEVKSRIRALNL 156
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI--- 287
L+ C+ + DLAL +F+EM +GC PN S+ L+RG + + +E ++ Y M
Sbjct: 157 LLDVLCQRNRSDLALQIFQEMDYQGCYPNRDSYRILMRGLCEDGRLNEATHLLYSMFWRI 216
Query: 288 -ELGCEFSSVTCEILVDGLCNEGRVLKACELV-----------------IDFSR------ 323
+ G V L+D LC+ G+V +A E++ +D S+
Sbjct: 217 SQKGSGEDIVVYRTLLDALCDNGQVEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCED 276
Query: 324 -------------RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
RG +P Y + L EG G A +V+DE ++G PS+
Sbjct: 277 IEATKLLINEALIRGGVPSLASYTAMAVDLYCEGKTGQADKVLDETQERGYRPSLRTYEA 336
Query: 371 LIEGLRRLRKGVEASGLMEK-MLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLAST 428
+ L R + EA ++E+ M++ +P+ +N LL+ LCD G + A L+ +A
Sbjct: 337 KVTALCRQGRSGEAINVIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQ 396
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G + TY ILV G R+ R E ++ EML + + P TYN + GLS+
Sbjct: 397 VGCVANQETYGILVDGLCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGLSS 450
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)
Query: 177 FEAMRKLID------GRPSVSIYNVLINGFV---KCREFDKALGFYDRMVRDRVKPDVVT 227
EA + LI+ G PS++ Y + K + DK L D +P + T
Sbjct: 277 IEATKLLINEALIRGGVPSLASYTAMAVDLYCEGKTGQADKVL---DETQERGYRPSLRT 333
Query: 228 FNILISGFCRNKKFDLALGLF-REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+ ++ CR + A+ + REM E+ PNV +N L++G V+ M
Sbjct: 334 YEAKVTALCRQGRSGEAINVIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRM 393
Query: 287 I-ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
++GC + T ILVDGLC +GR ++A +++ + + P Y L+ L G
Sbjct: 394 AKQVGCVANQETYGILVDGLCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGLSSMGR 453
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLI 372
A+ ++E+ + LP + +L+
Sbjct: 454 QYEAVIWLEEMVSQDKLPELYVWRSLV 480
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 223 PDVVTFNIL-ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
P + ++ + + +C K A + E +E+G P++ ++ + + + E +N
Sbjct: 294 PSLASYTAMAVDLYCEGKTGQ-ADKVLDETQERGYRPSLRTYEAKVTALCRQGRSGEAIN 352
Query: 282 -MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYFGLVEK 339
+ EM+E + +L+ GLC+ G A + +++ G + Y LV+
Sbjct: 353 VIEREMVERNSVPNVRLYNVLLKGLCDAGNSAIAVSYLKRMAKQVGCVANQETYGILVDG 412
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC +G A +V++E+ K P LI GL + + EA +E+M+ + LP+
Sbjct: 413 LCRDGRFVEASKVLEEMLIKSYWPPADTYNILIRGLSSMGRQYEAVIWLEEMVSQDKLPE 472
Query: 400 SVTFNCLLEDLC 411
+ L+ +C
Sbjct: 473 LYVWRSLVTSVC 484
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 194/438 (44%), Gaps = 47/438 (10%)
Query: 96 FAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI---FSCPE 152
F W S+ D T +++ + SS + H+V+ + C + + + E
Sbjct: 90 FMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDE 149
Query: 153 MERIFHFAVN------AFVKANRMNDGLLAFEAMRKL---------IDGRPSVS------ 191
+ +F F +N + +++ G LA+ R++ ID R V+
Sbjct: 150 LREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNG 209
Query: 192 ----------------------IYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTF 228
I L+ GF + AL +D M ++ P+ V++
Sbjct: 210 YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSY 269
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
+ILI G C + + A GL +M EKGC P+ ++ LI+ D+ N+ EMI
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
GC+ + T +L+DGLC +G++ +A + + + P Y L+ C +G
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E++ + K+ P+V L+EGL R+ K +A L+++ML G+ PD V++N L++
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G A +L + ++PD +T+ +++ + ++ + + ML +G
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 469 DLATYNSYMDGLSNARKS 486
D T + +DG+ K+
Sbjct: 510 DEVTGTTLIDGVCKVGKT 527
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F + + D L F+ M K + P+ Y++LI+G + ++A G D+M +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P T+ +LI C D A LF EM +GC PNV ++ LI G + K +E +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+M++ S +T L++G C +GRV+ A EL+ +R P + L+E LC
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
G A+ ++ + G P +++ LI+GL R A L+ M I PD +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
F ++ C G+ A L KG+ D +T L+ G + + ++ ++ ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 463 DEGFIPDLATYNSYMDGLSNARK 485
+ + N +D LS K
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCK 561
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + K R+ M K +P+V +N L+ G + + KA+ RM
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + + PD+V++N+LI G CR + A L M P+ ++F +I F + K
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D M+ G VT L+DG+C G+ A ++ + +L +
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ L L ++ ++ K G +PSV+ TTL++GL R + ++E M G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
LP+ + ++ LC GR +A++L G+ P+ +TY ++V GY +
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
V M++ G+ + Y+S + G ++K +
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 28/272 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
V+ +++ + E M KL P+V Y ++ING + ++A M
Sbjct: 588 VDGLIRSGDITGSFRILELM-KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF-FGERKFD-- 277
V P+ VT+ +++ G+ N K D AL R M E+G N +++L++GF ++ D
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNS 706
Query: 278 ---------------EGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDF 321
E +N ++E LG S + C LV LC EGR ++ +LV +
Sbjct: 707 EESTVSDIALRETDPECINELISVVEQLGGCISGL-CIFLVTRLCKEGRTDESNDLVQNV 765
Query: 322 SRRGV-LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRK 380
RGV L K D ++E C + +E++ + K G +PS + +I+GL++
Sbjct: 766 LERGVFLEKAMDI--IMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGD 823
Query: 381 GVEASGL-MEKMLKEGILPDS--VTF-NCLLE 408
A L ME + G++ S +T+ CL+E
Sbjct: 824 AERARELVMELLTSNGVVEKSGVLTYVECLME 855
>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
Length = 1014
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 148/286 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YN+L++G+VK +F K+L Y MVR ++PD VT+ +LI G D+A+
Sbjct: 657 PNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 716
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M +G P+ + F+ LI F + K + + M L SS T +++GL
Sbjct: 717 LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIR 776
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ + ++ E++ + + G+ P Y LV C G A + +E+ G +P+ +A
Sbjct: 777 KNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVA 836
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+++I GL + K EA + M++ G++P TF L+ LC + DA L+ L
Sbjct: 837 ESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLME 896
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
+ L D ++Y++L++G ++ R + +L EM +G P++ TY
Sbjct: 897 SCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTY 942
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 3/313 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ +VK + + L ++ M RK I RP Y +LI G +C D A+ F ++
Sbjct: 662 YNILMHGYVKGGQFSKSLYLYKYMVRKGI--RPDNVTYRLLILGLSECGLIDIAVKFLEK 719
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + + PD + F+ILI+ F K AL LF M+ +P+ +++ +I G +
Sbjct: 720 MVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNY 779
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ + EM+++G + + LV+ C G++ +A L + G++P D
Sbjct: 780 LDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESS 839
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC G A+ V + + G +P+V TTL+ L + K +A L M
Sbjct: 840 IIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCR 899
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D V++N L+ LC R DA L +KGL P+ TY L + GE
Sbjct: 900 LKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGE 959
Query: 456 NLVNEMLDEGFIP 468
L+ ++ + G IP
Sbjct: 960 ELLEDIEERGLIP 972
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 151/359 (42%), Gaps = 52/359 (14%)
Query: 176 AFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
A + ++K+ R S S+ YN +++ +VK F AL + M RD + D+ T+NI+I
Sbjct: 242 AEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDK 301
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
CR K+ A L + MR+ P+ ++NTLI GFFGE K + + M+ S
Sbjct: 302 LCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPS 361
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD------------------------ 330
T ++DG C R+ KA ++ + GV+P +
Sbjct: 362 VATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYS 421
Query: 331 ------------------------FDYFG---LVEKLCGEGNAGIALEVVDELWKKGNLP 363
FD +++ C GN A V D + + G+ P
Sbjct: 422 ALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSP 481
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+V L+ GL + V+A M +L D TFN LL +C G +A L
Sbjct: 482 NVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLC 541
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
PD TY IL+SG+ R+ + ++ MLD+G +PD Y ++GL N
Sbjct: 542 EKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLIN 600
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 1/282 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N L+ G K D+AL ++MV++ PD+ T+ IL+SGFCR K AL + + M
Sbjct: 521 FNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMML 580
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI-ELGCEFSSVTCEILVDGLCNEGRV 311
+KG P+ V++ L+ G E + + E+I + G + L++G G +
Sbjct: 581 DKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNI 640
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
++ D + V P Y L+ G +L + + +KG P + L
Sbjct: 641 NTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLL 700
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL A +EKM+ EGI PD + F+ L+ + + +A +L +
Sbjct: 701 ILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRM 760
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
P TY +++G R+N + ++ EML G P+ Y
Sbjct: 761 SPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHY 802
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 149/380 (39%), Gaps = 53/380 (13%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E ++ +N F ++N F M + PSV+ Y +I+G+ + R DKAL
Sbjct: 327 ECTYNTLINGFFGEGKINHAHYVFNHMLRQ-TFVPSVATYTTMIDGYCRNRRIDKALSVL 385
Query: 214 DRM--------------------VRDRVKPDVVT-------------------------- 227
M + D + PD+VT
Sbjct: 386 SEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKIS 445
Query: 228 -----FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
FN +I +C A ++ M G +PNV ++ L+RG +
Sbjct: 446 FDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQF 505
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
+ ++++ T L+ G+C G + +A +L + LP Y L+ C
Sbjct: 506 MFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCR 565
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-KEGILPDSV 401
+G AL ++ + KG +P +A T L+ GL + AS + ++++ KEG+ D +
Sbjct: 566 KGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCI 625
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N L+ G R+ + P+ +Y+IL+ GY + + + L M
Sbjct: 626 AYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYM 685
Query: 462 LDEGFIPDLATYNSYMDGLS 481
+ +G PD TY + GLS
Sbjct: 686 VRKGIRPDNVTYRLLILGLS 705
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 28/346 (8%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F V A+VK ++ D +A M + S N ++ V+ E F
Sbjct: 155 VFELLVKAYVKERKVLDAAVAVLFMDD-CGFKASPIACNTILRALVEQGESKYVWLFLRE 213
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN-PNVVSFNTLIRGFFGER 274
+ DV T NIL++ C N +F A + ++M K C N V++NT++ + +
Sbjct: 214 SLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KTCRLSNSVTYNTILHWYVKKG 271
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+F + + +M T I++D LC R +A L+ + ++P + Y
Sbjct: 272 RFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYN 331
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGV--------- 382
L+ GEG A V + + ++ +PSV TT+I+G RR+ K +
Sbjct: 332 TLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQIT 391
Query: 383 --------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+A +++ ML++GI PD VT++ L+ + G +A+ R S + D
Sbjct: 392 GVMPSEISKAKQILKSMLEDGIDPDIVTYSALINE----GMITEAEHFRQYMSRMKISFD 447
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++++ ++ Y E + + M+ G P++ TY + + GL
Sbjct: 448 SVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGL 493
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
+ N V F L++ + ERK + M + G + S + C ++ L +G K
Sbjct: 150 STNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGES-KYVW 208
Query: 317 LVIDFSRRGVLPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
L + S P D L+ LC G A +++ ++ K L + + T++
Sbjct: 209 LFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KTCRLSNSVTYNTILHWY 267
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ + A ++E M ++ I D T+N +++ LC + R+ A L L PD
Sbjct: 268 VKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDE 327
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ L++G+ E + + N ML + F+P +ATY + +DG R+
Sbjct: 328 CTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRR 377
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 43/273 (15%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV--- 201
+GIF P+ +F + AF + ++M++ L F M K + PS Y+ +ING +
Sbjct: 723 EGIF--PD-RLVFDILITAFSEKSKMHNALQLFNCM-KWLRMSPSSKTYSAMINGLIRKN 778
Query: 202 ------------------------------KCR--EFDKALGFYDRMVRDRVKPDVVTFN 229
KCR + D+A + M + P V +
Sbjct: 779 YLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAES 838
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+I G C+ K + A+ +F M G P V +F TL+ E K + +++ M
Sbjct: 839 SIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESC 898
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
+ V+ +L+ GLC + R+ A +L + +G+ P Y L + G
Sbjct: 899 RLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNG 958
Query: 350 LEVVDELWKKGNLPSVIACTTL----IEGLRRL 378
E+++++ ++G +P + L + +RRL
Sbjct: 959 EELLEDIEERGLIPVYVQLENLERQMEDAIRRL 991
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+A +A+ +D+ G S IAC T++ L + + + L D T N
Sbjct: 171 DAAVAVLFMDDC---GFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCN 227
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
LL LC G A+ + T L + +TY+ ++ Y ++ R K ++ +M +
Sbjct: 228 ILLNSLCTNGEFRKAEDMLQKMKTCRLS-NSVTYNTILHWYVKKGRFKAALCVLEDMERD 286
Query: 465 GFIPDLATYNSYMDGLSNARKSVR 488
D+ TYN +D L ++S R
Sbjct: 287 SIPADIYTYNIMIDKLCRIKRSAR 310
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 170/377 (45%), Gaps = 40/377 (10%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKC 203
DG P++ + + A +A ++ +R+ G +P+V YNVL++ K
Sbjct: 203 DGKTVAPDV-HTYTAMIKALCRAGEIDAAFAMLAELRR--SGIQPTVVTYNVLMDALCKS 259
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
++A RMV RV+P +VTF ILISG R ++F + +EM+ G PN V +
Sbjct: 260 GRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIY 319
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA--------- 314
N +I + E + + EM+ G + + VT ++ LC EG + A
Sbjct: 320 NEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLL 379
Query: 315 ------CEL---VIDFSRRG------------------VLPKDFDYFGLVEKLCGEGNAG 347
C L V+ + RG + P D +++LC G
Sbjct: 380 AGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHE 439
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
A E+ ++ KG +V LI GL + EA+ +++ M+ G+ D +T+N ++
Sbjct: 440 EAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMI 499
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
+ C + +A +LR +G PD T++I + Y + +E +L+++M EG
Sbjct: 500 QGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLK 559
Query: 468 PDLATYNSYMDGLSNAR 484
PD+ TY + +DG A+
Sbjct: 560 PDIVTYGTIIDGYCKAK 576
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 139/291 (47%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V+ N LI+G + +A MV V+ D +T+NI+I G C+ K D A+ L
Sbjct: 456 NVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLR 515
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+M ++G P++ +FN + + K +E +++ +M G + VT ++DG C
Sbjct: 516 DDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKA 575
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
+ KA E + + + G+ P Y L+ GN A+ ++D + G P+ +
Sbjct: 576 KDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTY 635
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+L+ + E + + + + I + + +++ C +G+ +A +
Sbjct: 636 NSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHS 695
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+G+ P+ MTY L+ Y++ ++E L +EM+ G +PD +YN+ + G
Sbjct: 696 RGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISG 746
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 2/304 (0%)
Query: 152 EMERI-FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
E++RI ++ + KA++M++ + + M K +P + +N+ ++ + + ++ L
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR-GFKPDLFTFNIFLHTYCNLGKVEEIL 547
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
D+M + +KPD+VT+ +I G+C+ K A E+ + G PN V +N LI G+
Sbjct: 548 HLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGY 607
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + + M G + + VT L+ +C+ G V + + + +
Sbjct: 608 GRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGV 667
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y +++ C G A+ E+ +G P+ + TTL+ + EAS L ++
Sbjct: 668 IGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDE 727
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+ GI+PDSV++N L+ C+V S++ L DG +Y+ V G T
Sbjct: 728 MVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWC 787
Query: 451 RKEG 454
+KE
Sbjct: 788 QKEA 791
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 29/360 (8%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISA-NPCPCSNDGIFS-----------CPEMERIF 157
TF ++ LA +F E+ +VL + P N+ I++ C E ++F
Sbjct: 282 VTFGILISGLARGQQFGEVGAVLQEMQGFGITP--NEVIYNEMIGWHCRKGHCSEALKLF 339
Query: 158 HFAVNAFVKANRMNDGLLA--------FEAMRKLIDGR--PSVSIYNVLINGFVKCR--- 204
V+ +K + L+A E K++D + ++ L N V
Sbjct: 340 DEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRG 399
Query: 205 --EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
D L M+ +KP+ I C++ K + A ++ ++ KG NV +
Sbjct: 400 TGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVAT 459
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
N LI G E + M+ G E +T I++ G C ++ +A +L D
Sbjct: 460 SNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI 519
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+RG P F + + C G L ++D++ +G P ++ T+I+G + +
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMH 579
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ + +++K G+ P++V +N L+ G DA + G+ P +TY+ L+
Sbjct: 580 KANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 36/254 (14%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERKFDEGVN 281
P + T +IL+ + D+A +F EMR+ K P+V ++ +I+ + D
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFA 232
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
M E+ G + + VT +L+D LC GRV +A F +G + + G V
Sbjct: 233 MLAELRRSGIQPTVVTYNVLMDALCKSGRVEEA------FRLKGRMVE-----GRVR--- 278
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
PS++ LI GL R ++ E ++++M GI P+ V
Sbjct: 279 ---------------------PSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEV 317
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N ++ C G +A +L +KG+ +TY+++ +E + E +++EM
Sbjct: 318 IYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM 377
Query: 462 LDEGFIPDLATYNS 475
L G + + +NS
Sbjct: 378 LLAGMMVHCSLFNS 391
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 36/159 (22%)
Query: 355 ELWKKGNLPSVIACTTLIEGL-------------RRLRKG-------------------- 381
EL +G PS+ C+ L+E L +R G
Sbjct: 165 ELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRA 224
Query: 382 --VEAS-GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
++A+ ++ ++ + GI P VT+N L++ LC GR +A RL+ + P +T+
Sbjct: 225 GEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTF 284
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
IL+SG R + E ++ EM G P+ YN +
Sbjct: 285 GILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMI 323
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 1/332 (0%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI-DGRPSVSIYNVLINGFVKCREFDK 208
C E+E + + +N+ + M + D +P+ +N+++ G K ++ D
Sbjct: 399 CGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDM 458
Query: 209 ALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
AL M+ K ++ FN LI C + + G+F +M++ G P+ ++N+L
Sbjct: 459 ALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFY 518
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLP 328
G + +++ EM G C +V LC GRV +A + + + G LP
Sbjct: 519 GICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLP 578
Query: 329 KDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
Y + +C G AL + ++ K LP V+A LI G R+ K EA +M
Sbjct: 579 DIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIM 638
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRE 448
E+ML++G+ P VT+N +++ C GR A + P +TY L+ G+
Sbjct: 639 EEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSA 698
Query: 449 NRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R E L EM ++G P+ Y ++++GL
Sbjct: 699 GRPDEAIKLWCEMREKGCAPNNIAYTAFINGL 730
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 62/383 (16%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRK---LIDGRPSVSIYNVLINGFVKCREFDKAL 210
E+ V+ F K R++ + F M ++D +++Y+VLI G + ++ +A+
Sbjct: 280 EKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFVVD----LAMYSVLIEGLCQQKDIARAV 335
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKF----------------------------- 241
+ M V PDV +I FCR F
Sbjct: 336 KLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEE 395
Query: 242 -------DLALGLFREMREKG-------------------CNPNVVSFNTLIRGFFGERK 275
+ A L R M G PN SFN ++ G +K
Sbjct: 396 LVHCGEVEAAYQLLRSMVCGGQAVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKK 455
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + + +MI LGC+ + L+ LCN R+ + + G+ P +F Y
Sbjct: 456 LDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNS 515
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L +C + AL+++ E+ G+ P + CT +++ L + EA ++ ML+ G
Sbjct: 516 LFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
LPD VT++ + +C+ G DA L S K PD + ++IL++G+ + ++ E +
Sbjct: 576 FLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQ 635
Query: 456 NLVNEMLDEGFIPDLATYNSYMD 478
++ EML++G P + TYN +D
Sbjct: 636 KIMEEMLEKGLFPSVVTYNLMID 658
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%)
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
+A+ F D M++ PD+VT++ ++G C + D AL LFR++ K P+VV+ N LI
Sbjct: 563 EAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILI 622
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF K DE + EM+E G S VT +++D C GR+ KA +
Sbjct: 623 NGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQ 682
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y L++ C G A+++ E+ +KG P+ IA T I GLR+ + A
Sbjct: 683 PTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTY 742
Query: 388 MEKMLKEGILPDSVTF 403
E+M+ +G D+ +
Sbjct: 743 FEEMVTKGFELDTFSL 758
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N F K++++++ E M L G PSV YN++I+ K +KA+ + D+MV +
Sbjct: 622 INGFRKSSKLDEAQKIMEEM--LEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYE 679
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+P V+T+ LI GFC + D A+ L+ EMREKGC PN +++ I G + +
Sbjct: 680 EKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETA 739
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ EM+ G E + + ++ L + G +K CEL+ + ++ + GL+ +
Sbjct: 740 LTYFEEMVTKGFELDTFSLLYFINFLISNGYPMKGCELLKEVLQKDTYGNNLKMVGLINE 799
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 147 IFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
I +C EM + F+ +A + DG+L I P + Y+ +NG E
Sbjct: 545 IKNCTEMVQQLCFS-GRVTEAVQFLDGMLQ-------IGFLPDIVTYSAAMNGMCNTGEV 596
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D AL + + PDVV NILI+GF ++ K D A + EM EKG P+VV++N +
Sbjct: 597 DDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLM 656
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I + ++ ++ +M+ + + +T L+DG C+ GR +A +L + +G
Sbjct: 657 IDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGC 716
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
P + Y + L G AL +E+ KG
Sbjct: 717 APNNIAYTAFINGLRKCGRIETALTYFEEMVTKG 750
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 177/523 (33%), Gaps = 85/523 (16%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLPSVTLTPTA-HHTHLLRFLKTHLLTPTNNQITPSSLL 75
S P P P+P+ P L P A LR L L P +
Sbjct: 24 STSASPPPRAPVPASPSYLAHHLLDEFSRPRATRDAARLRRLAAELTAPAAESV------ 77
Query: 76 HFLKSKLHHHPQFTH-YDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNF 134
L P + H DF F WA+ FRH + + L R +
Sbjct: 78 ------LLRLPSWRHALDF--FRWAADQPGFRHSCYSLNAMASLLPRHQRAHLDRLAADA 129
Query: 135 ISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYN 194
ISA C F + A + + AF+A R P+ YN
Sbjct: 130 ISAR-----------CLMTPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYN 178
Query: 195 VLINGFVKCREFDKALGFYDRMVR--DRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
L++ K D A MV D T L+ +C + D A +F+ M
Sbjct: 179 CLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPDDANDVFQRMS 238
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G V TL+ F K D V + M LG S T +LV G +GRV
Sbjct: 239 ELGWVDEHV-LTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVD 297
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA ++ G + Y L+E LC + + A+++ E+ G P V +I
Sbjct: 298 KAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVI 357
Query: 373 EGLRR-----------------LRKG------------------VEAS-GLMEKM----- 391
E R L+ G VEA+ L+ M
Sbjct: 358 EAFCREGDFAVIGPFINENAEYLKSGSVVPLYNVVLEELVHCGEVEAAYQLLRSMVCGGQ 417
Query: 392 --------------LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
++E P+S +FN ++ LC V + A L + G +
Sbjct: 418 AVNNDVAGGAHMLHIREDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILM 477
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
++ L+ +R +EG + N+M D G P TYNS G+
Sbjct: 478 FNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGI 520
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV--IACTTLIEGLRRLRKGV 382
G P + Y L++ L G A A + E+ + SV T+L+ +
Sbjct: 169 GCTPNSYTYNCLLDALAKAGRADDAQARLREMVARCGDGSVDKYTLTSLLRCYCNAGRPD 228
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ + ++M + G + + V L+ G+ A L G+ T +LV
Sbjct: 229 DANDVFQRMSELGWVDEHV-LTTLMVAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLV 287
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
G+T++ R + ++ +M+ GF+ DLA Y+ ++GL + R +
Sbjct: 288 HGFTKQGRVDKAMDMFAKMVSYGFVVDLAMYSVLIEGLCQQKDIARAVK 336
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 1/295 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ N+L+ G V + + AL D M+ + PDVVT+ +++ +C + A L
Sbjct: 198 PNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 257
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ G P+ + LI G+ RK + + EM G + + VT ++++ C
Sbjct: 258 FDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCK 317
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
E + +A +L + G +P +V+ LC +G AG A E+ ++ KK P
Sbjct: 318 ERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTV 377
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TLI L + EA L ++ L+ G LP +T+N L+ LC+ G +A R+
Sbjct: 378 VSTLIYWLCKKGMVQEARKLFDE-LERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMV 436
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ +P+ MTY L+ G+ + + EG L EM+ G P Y + +D LS
Sbjct: 437 ERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSK 491
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 176 AFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E R+++ P ++ + LI K +A +D + R + P ++T+N LI
Sbjct: 359 ANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARKLFDELERGFL-PSLLTYNSLII 417
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C N + A ++ +M E+ PN +++ LI+GF K +EG + EM+ GC
Sbjct: 418 GLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTP 477
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
S + LVD L C +V + RG +DF
Sbjct: 478 SKFLYQALVDSLSKPSHDDTVCTIVEAAALRG---QDF 512
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ +MV+ V PD + LI C+ A LF E+ E+G P+++++N+LI G
Sbjct: 362 MWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARKLFDEL-ERGFLPSLLTYNSLIIGLC 420
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
+ E + +M+E E +++T E L+ G C G+ + L + RG P F
Sbjct: 421 ENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKF 480
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
Y LV+ L + +V+ +G
Sbjct: 481 LYQALVDSLSKPSHDDTVCTIVEAAALRGQ 510
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 149/306 (48%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D +P V+ YN+LIN K + + A+GF D + + P+ +++ LI +C++K++D+A
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L +M E+GC P++V++ LI G D+ VNM ++I+ G + +L+ G
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC GR L A L + R +LP + Y L++ G+ A +V +KG
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
V+ +I+G R EA M +M +E ++PD T++ +++ A ++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
P+ +TY L++G+ + K E EM +P++ TY + + L+
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 485 KSVRQT 490
++ +
Sbjct: 640 STLEKA 645
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 178/423 (42%), Gaps = 47/423 (11%)
Query: 95 IFAWAST--IDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
+F W S+ D F + ++ LA F+E+ VL + +++
Sbjct: 83 LFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEA------ 136
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ + H A+ ++ ++ + ++ + +L D P V N L++ VK R A
Sbjct: 137 LSHVLH----AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKV 192
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
YD M D + IL+ G C K ++ L KGC PN+V +NT+I G+
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL----- 327
+ + E+ G + T +++G C EG + + L+ + RG+
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 328 ------------------------------PKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
P Y L+ +LC EG +A+ +DE
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
KKG +P+ ++ LI+ + ++ AS L+ +M + G PD VT+ L+ L G
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
DA +++ +G+ PD Y++L+SG + R + L +EMLD +PD Y + +
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 478 DGL 480
DG
Sbjct: 493 DGF 495
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 123/265 (46%)
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
++ + KPDV T+NILI+ C+ K ++A+G E +KG PN +S+ LI+ + ++
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+D + +M E GC+ VT IL+ GL G + A + + RGV P Y
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ LC G A + E+ + LP TLI+G R EA + +++G
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D V N +++ C G +A + + L PD TY ++ GY ++
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ M P++ TY S ++G
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGF 600
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 26/322 (8%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I++ ++ K R L F M R ++ P +Y LI+GF++ +FD+A +
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL---PDAYVYATLIDGFIRSGDFDEARKVF 508
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
V VK DVV N +I GFCR+ D AL M E+ P+ +++T+I G+ +
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ + + M + C+ + VT L++G C +G A E + R ++P Y
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628
Query: 334 FGLVEKLCGEGNAGIALEVVDELWK----KGNLPSVIACTTLIEGLRRLRKG---VEASG 386
L+ L E + LE W+ +P+ + L++G + G E G
Sbjct: 629 TTLIRSLAKESST---LEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 387 -----------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+M +G + +N L LC G A + KG PD
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745
Query: 436 MTYHILVSGYTRENRRKEGENL 457
+++ ++ G+ K+ N+
Sbjct: 746 VSFAAILHGFCVVGNSKQWRNM 767
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 38/223 (17%)
Query: 182 KLIDGRPSVSIYNVLINGFVK-CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+L D P+V Y LI K +KA+ +++ M+ ++ P+ VTFN L+ GF +
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+ G N ++L FF K D + A S++ C
Sbjct: 677 GKVL------AEPDGSNHGQ---SSLFSEFFHRMKSDGWSDHA------AAYNSALVC-- 719
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
LC G V AC ++G P + ++ C GN+ + W+
Sbjct: 720 ----LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNS--------KQWRNM 767
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
+ ++ G + L V S ++E+ L + ++ ++ T
Sbjct: 768 DFCNL--------GEKGLEVAVRYSQVLEQHLPQPVICEASTI 802
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 158/330 (47%), Gaps = 14/330 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID---GR---PSVSIYNVLINGFVKCREFDKAL 210
+H +N + + + ND R+++D GR P++ Y +L+ G+ + ++A
Sbjct: 281 YHAVMNGYCEVGQTNDA-------RRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAE 333
Query: 211 GFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
G + +++ + D F +I+G+C+ + + A L EM + N+ +N +I G
Sbjct: 334 GVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMING 393
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + E N+ +EM +G + + LVDG C +G + KA E R G
Sbjct: 394 YCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAAT 453
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y L++ C G+ AL + + KKG P+ I+C+TL++G + K +A L +
Sbjct: 454 TLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWK 513
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+ L G+ ++ TFN ++ LC + R +A+ L PD +TY L SGY +
Sbjct: 514 ETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIG 573
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
++NE+ + GF P + +NS + G
Sbjct: 574 DMDRASRILNELENLGFAPTIEFFNSLITG 603
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 26/318 (8%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI G ++ K M + P+ V + LI+G+C+ A L
Sbjct: 592 PTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNL 651
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDE---------GVNMAYEM----IELG--CE 292
+ EM EKG PN+ ++L+ F+ + KFDE G +M ++ +E+G
Sbjct: 652 YLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVAN 711
Query: 293 F-----------SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
F + + I++ GLC GR+ A L+ D +G + +F Y L+
Sbjct: 712 FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCS 771
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G +A ++ D + G P+++ +LI GL + + A L +K+ +GI P+++
Sbjct: 772 ASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAI 831
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N L++ C G +A +L+ +G+ P TY IL++G + +E L+++M
Sbjct: 832 TYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQM 891
Query: 462 LDEGFIPDLATYNSYMDG 479
++ P+ TY + + G
Sbjct: 892 IENNVDPNYVTYWTLIQG 909
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 1/317 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +N + K RM + M + RP YN L++G+ K +KA Y+
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTG-VGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT 444
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+R+ +T+N L+ GFC D AL L+ M +KG PN +S +TL+ GFF K
Sbjct: 445 MLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGK 504
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ +N+ E + G ++ T +++GLC R+ +A ELV + P Y
Sbjct: 505 TEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRT 564
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L C G+ A +++EL G P++ +LI G ++ + + ++ +M G
Sbjct: 565 LFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRG 624
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P++V + L+ C G A L L KGL P+ LVS + R+ + E
Sbjct: 625 LSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEAN 684
Query: 456 NLVNEMLDEGFIPDLAT 472
++ ++ IPD++
Sbjct: 685 LVLQNLVGTDMIPDISA 701
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 145/353 (41%), Gaps = 61/353 (17%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+ + +N +ING K +A D+M + R PD++T+ L SG+C+ D A +
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
E+ G P + FN+LI G F ++ + ++ +EM G ++V L+ G C E
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV--- 365
G + A L ++ +G++P F LV +G A V+ L +P +
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAP 702
Query: 366 -----------------------IACTTLIEGLRRLRK---------------------- 380
I +I GL +L +
Sbjct: 703 RLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFT 762
Query: 381 ------GVEASG-------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
G ASG L + ML G+ P+ VT+N L+ LC G A L
Sbjct: 763 YSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLW 822
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG+ P+ +TY+ L+ + ++ E L M++EG P + TY+ ++GL
Sbjct: 823 TKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 163/374 (43%), Gaps = 47/374 (12%)
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI------FHFAV--NAFVKA 167
+R+L +S+LN ++ + +F +M+R F A+ A+ K
Sbjct: 199 MRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE--QMQRAGALPDKFTVAIMAKAYCKV 256
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ L E M K+ ++ Y+ ++NG+ + + + A D + P++VT
Sbjct: 257 KGVVHALEFVEEMTKM-GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVT 315
Query: 228 FNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
+ +L+ G+C K + A G+ +E+R+ K + F +I G+ + ++ + EM
Sbjct: 316 YTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEM 375
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
++ + + I+++G C GR+++A ++ + + GV P + Y LV+ C +G
Sbjct: 376 VDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLM 435
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A E + ML+ G ++T+N L
Sbjct: 436 NKAFETYN-----------------------------------TMLRNGFAATTLTYNAL 460
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L+ C +G DA RL L KG+ P+ ++ L+ G+ + + ++ NL E L G
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520
Query: 467 IPDLATYNSYMDGL 480
+ T+N+ ++GL
Sbjct: 521 AKNTTTFNTVINGL 534
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 157/365 (43%), Gaps = 63/365 (17%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDRMVRD 219
V+ + K MN + M L +G + ++ YN L+ GF D AL + M++
Sbjct: 426 VDGYCKKGLMNKAFETYNTM--LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+ ++ + L+ GF ++ K + AL L++E +G N +FNT+I G + E
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEG------RVL--------------------- 312
+ +M + C +T L G C G R+L
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603
Query: 313 --------KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
K +++ + S RG+ P Y L+ C EG+ A + E+ +KG +P+
Sbjct: 604 HFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPN 663
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ C++L+ R K EA+ +++ ++ ++PD + A RL +
Sbjct: 664 LFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPD-----------------ISAPRLEI 706
Query: 425 LASTKGLDPDG--------MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
+D + ++I++ G + R ++ +NL+ ++ D+GF+ D TY+S
Sbjct: 707 GKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSL 766
Query: 477 MDGLS 481
+ G S
Sbjct: 767 IHGCS 771
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
+ SF+ L+R + D + + EM LGC S +C +++ L G + +
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG---NL------------- 362
R G LP F + + C ALE V+E+ K G NL
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291
Query: 363 -------------------PSVIACTTLIEGLRRLRKGVEASGLMEKMLK-EGILPDSVT 402
P+++ T L++G + EA G+++++ K + ++ D
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
F ++ C +GR DA RL L + Y+I+++GY + R E N+++EM
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411
Query: 463 DEGFIPDLATYNSYMDG 479
G PD +YNS +DG
Sbjct: 412 GVGVRPDTYSYNSLVDG 428
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
FS+ + ++L+ L N G++ A ++ + G ++ +L G+ G +
Sbjct: 170 SFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVA 229
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
V +++ + G LP + + +++ V A +E+M K G+ + V ++ ++ C
Sbjct: 230 VFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYC 289
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML-DEGFIPDL 470
+VG+T DA R+ +G P+ +TY +LV GY E +E E +V E+ ++ + D
Sbjct: 290 EVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDE 349
Query: 471 ATYNSYMDG 479
A + + ++G
Sbjct: 350 AVFGAVING 358
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM 251
++N++I G K + A + D T++ LI G + D+A L M
Sbjct: 727 MWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTM 786
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
G PN+V++N+LI G + V++ ++ G +++T L+D C +G +
Sbjct: 787 LSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYI 846
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A +L G+ P F Y L+ LC +G A++++D++ + P+ + TL
Sbjct: 847 TEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTL 906
Query: 372 IEGLRR 377
I+G R
Sbjct: 907 IQGYVR 912
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%)
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ L G AL+V DE+ G S+ +C +++ L + + E+M + G
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
LPD T + + C V V A + G++ + + YH +++GY + +
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDAR 298
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+++ + GF P++ TY + G N +
Sbjct: 299 RMLDSLPGRGFSPNIVTYTLLVKGYCNEK 327
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ YN LI+ K +A RM+ + + P V T++ILI+G C + A+ L
Sbjct: 828 PNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKL 887
Query: 248 FREMREKGCNPNVVSFNTLIRGF 270
+M E +PN V++ TLI+G+
Sbjct: 888 LDQMIENNVDPNYVTYWTLIQGY 910
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 172 DGLL--AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
DG + AF+ +++I+ P+V Y++LING ++A+ D+M+ + V P+ VT
Sbjct: 843 DGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVT 902
Query: 228 FNILISGFCRNKKFDLAL 245
+ LI G+ R + D+ +
Sbjct: 903 YWTLIQGYVRCESVDVPI 920
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 165 VKANRMNDGLLAFEAM-------RKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDR 215
V N + DGL +AM +++ID P+ + YN LI+G++ ++ +A+
Sbjct: 157 VTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 216
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M RD +P+VVT+N+LI C++ A +F M + G P+ ++ +L+ G+ E
Sbjct: 217 MSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGN 276
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E N+ M++ G + T I + C GR+ +A I + G +P Y
Sbjct: 277 LVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTT 336
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC G A+ ++ G P++I TTLI G K +A L +M+ G
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD F +++ L G+ +A +L L G P+ ++Y+ ++ GY E
Sbjct: 397 IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 456
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
L+++ML G P T+N+ +DG+
Sbjct: 457 KLLDDMLLIGLKPTAVTFNTLLDGM 481
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 146/326 (44%), Gaps = 2/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ A +N G A + K +V+ +L K R D RM
Sbjct: 16 FGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRM 75
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG--CNPNVVSFNTLIRGFFGER 274
PDV +++ L+ G C KK + A L M E G C P+VVS++T+I GFF E
Sbjct: 76 PELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEG 135
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +M++ G + VTC ++DGLC + KA ++ ++P Y
Sbjct: 136 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 195
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ G A+ ++ E+ + G P+V+ LI+ L + EA + M++
Sbjct: 196 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQS 255
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD+ T+ LL G V+ + ++ L G+ + T+ I + Y + R E
Sbjct: 256 GPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEA 315
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+M GF+PD+ TY + +DGL
Sbjct: 316 SLTFIKMQQLGFMPDIVTYTTVIDGL 341
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+V PD+ TF ILIS C +L ++ + G + V+F L+R +++ +
Sbjct: 8 KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67
Query: 280 VNMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG--VLPKDFDYFGL 336
+N+ M ELGC + L+ GLC E + +A EL+ + G P Y +
Sbjct: 68 MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ EG+ G A + ++ G P+V+ C ++I+GL +++ +A ++++M+ E I
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 187
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+P+ T+N L+ G+ +A R+ S G P+ +TY++L+ + E
Sbjct: 188 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEARE 247
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
+ N M+ G PD TY S + G +
Sbjct: 248 IFNSMIQSGPKPDATTYGSLLHGYAT 273
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 16/288 (5%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y L++G+ + D MV++ ++ + TF+I I +C+ + D A
Sbjct: 258 KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASL 317
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F +M++ G P++V++ T+I G + D+ ++ +MI+ G + +T L+ G
Sbjct: 318 TFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFS 377
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G+ KA EL + RG+ P + ++++L EG A ++ D + + G P+V+
Sbjct: 378 MYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVV 437
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+ T+I G + E L++ ML G+ P +VTFN LL+ + +
Sbjct: 438 SYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM------------- 484
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
GL PD T L+ + R ++ L EML + D T N
Sbjct: 485 ---GLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 62/311 (19%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D TT+ ++ A+ E+++V + + N G+ S F + A+ K
Sbjct: 260 DATTYGSLLHGYATEGNLVEMNNVKDLMVQN-------GMRS---NHHTFSIEIYAYCKC 309
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
R+++ L F M++L P + Y +I+G K D A+ + +M+ D + P+++T
Sbjct: 310 GRLDEASLTFIKMQQL-GFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F LI GF K++ A LF EM ++G P+V F +I
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMI-------------------- 408
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
D L EG+V +A +L R G P Y ++ G G
Sbjct: 409 ---------------DRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 453
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
++++D++ G P+ + TL++G M+ G+ PD T L+
Sbjct: 454 EVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLI 497
Query: 408 EDLCDVGRTVD 418
+ C+ GR D
Sbjct: 498 DSCCEDGRIED 508
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 204/480 (42%), Gaps = 25/480 (5%)
Query: 10 PILIHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQI 69
P + + +P P P +IP P + V + H+HL+ L + +
Sbjct: 106 PNYMRSWNPIPVPHRTIPEPRGQDLDFVNVA---------HSHLINS-DWAKLNSMSTGL 155
Query: 70 TPSSLLH-FLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSEL 128
TP + H LK K H F F W + T+ I+ L +++F
Sbjct: 156 TPYRMKHIMLKIKKDHV-----LSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSA 210
Query: 129 HSVLNFISAN-----PCPCSNDGIFS---CPEMERIFHFAVNAFVKANRMNDGLLAFEAM 180
SVL I + P ++S C +F + + ++ + + F M
Sbjct: 211 ESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQM 270
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+ P V N I+ + + D AL FY M R R+ P+V T N+++ FC+ K
Sbjct: 271 KDY-GFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGK 329
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+ A+ +F+ M G +P + S+NTLI G+ + + G+ + M + G VT
Sbjct: 330 LEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNT 389
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C G++ +A ++ + V+P Y L+ GN+ + + DE+ + G
Sbjct: 390 LINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNG 449
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
++ LI GL + +A+ L++++ +E ++P+S TF+ L+ C + A
Sbjct: 450 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAF 509
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+L G P+ T+ +L+S + + +V EM + PD T + GL
Sbjct: 510 QLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGL 569
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 1/295 (0%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
AF K ++ + F+ M + P+++ YN LI G+ + + M ++ V+
Sbjct: 323 AFCKWGKLEKAIEVFKRMETM-GFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVR 381
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PD VTFN LI+GFCR K A +F EM+ PN +++NTLI G+ + G +
Sbjct: 382 PDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRL 441
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM+ G + +T L+ GLC EGR KA LV + R ++P + L+ C
Sbjct: 442 HDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCV 501
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
N+ A ++ + + G P+ LI + A ++ +M + I PDS T
Sbjct: 502 RKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDT 561
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
+ L L G+ A +L K L P+G ++ ++ GEN
Sbjct: 562 LSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTINFRAESEEKENGENF 616
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F + ++++ F M K D P+ YN LING+ + + +D M
Sbjct: 387 FNTLINGFCRGGKLHEANKIFSEM-KANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEM 445
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R+ +K D++T+N LI G C + A L +E+ + PN +F+ LI G +
Sbjct: 446 LRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNS 505
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + MI GC + T ++L+ C A E+V + S R + P L
Sbjct: 506 ERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSEL 565
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLP 363
L G +AL++ E+ K +P
Sbjct: 566 CRGLWLSGKEELALKLCKEMEMKHLMP 592
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 174/382 (45%), Gaps = 9/382 (2%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------PEME 154
T +FRH ++ ++ L + SE S++ + + S +F+ +
Sbjct: 5 TNSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRS 64
Query: 155 RIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
I+ F+ + A++++ + D + + R+ P + VL +K + F GF
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVL-EHLMKLKYFKLVWGF 123
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y+ ++ + FNIL+ FC+ +A +F + + G P+VVSFNTL+ G+
Sbjct: 124 YEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIR 183
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
DEG + M G + T +L++GLC E ++ A L + +G++P
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVT 243
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
+ L+ C +A+E+ ++ + P +I TLI GL + +A L+++M
Sbjct: 244 FTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+G+ PD +T+ L++ C G A R + + D + Y L+SG +E R
Sbjct: 304 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYL 363
Query: 453 EGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G PD TY
Sbjct: 364 DAEKVLREMLSVGLKPDTGTYT 385
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 36/246 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N +++ +++G AM +P V Y+VLING K + D A G +D M
Sbjct: 174 FNTLMNGYIRLGDLDEGFRLKSAMHA-SGVQPDVYTYSVLINGLCKESKMDDANGLFDEM 232
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTF LI+G C+N++ DLA+ ++++M + +P+++++NTLI G +
Sbjct: 233 LDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDG-------------------------------- 304
+ ++ EM G + +T L+DG
Sbjct: 293 KQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTAL 352
Query: 305 ---LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
LC EGR L A +++ + G+ P Y ++ + C +G+ +++ E+ + G+
Sbjct: 353 ISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 412
Query: 362 LPSVIA 367
+PSV++
Sbjct: 413 VPSVVS 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 328 PKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P +F L+ + C EG+ +A V + + K G PSV++ TL+ G RL E
Sbjct: 133 PASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L M G+ PD T++ L+ LC + DA+ L KGL P+G+T+ L++G+
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHC 252
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ R + +ML + PDL TYN+ + GL
Sbjct: 253 KNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 8/262 (3%)
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT---LIRGFFGERKFDE 278
+ D+ F+ LI+ + + A+ +R RE + V F+T ++ + F
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTRE---HKFWVPFDTCRKVLEHLMKLKYFKL 119
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLV 337
E+++ G S IL+ C EG + + +LV + ++ G+ P + L+
Sbjct: 120 VWGFYEEILDCGYPASLYFFNILMHRFCKEGDI-RVAQLVFNAITKWGLRPSVVSFNTLM 178
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
G+ + + G P V + LI GL + K +A+GL ++ML +G++
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLV 238
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ VTF L+ C R A + ++ L PD +TY+ L+ G ++ K+ +L
Sbjct: 239 PNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL 298
Query: 458 VNEMLDEGFIPDLATYNSYMDG 479
++EM +G PD TY + +DG
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDG 320
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K G+ P V+FN L+ +G + RL+ G+ PD TY +L++G +E++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 223
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ L +EMLD+G +P+ T+ + + G R+
Sbjct: 224 DANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRR 256
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 38/336 (11%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKL--IDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I++ + +VK + F+ MR + D RPS+ Y+ LI G + + +A +
Sbjct: 194 IYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELF 253
Query: 214 DRMV-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
+ M+ +DR+ PD +T+N+LI GFCR + + A +F MR+ C PN ++ TLI
Sbjct: 254 EDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLI----- 308
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+G C +G V A + + R GV P
Sbjct: 309 ------------------------------NGHCKKGEVEAARGVFEEMIRSGVQPDAVS 338
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y LV LC GN + +V E+W+KG V+ L+EGL + R+ EA L+EK+
Sbjct: 339 YTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLP 398
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
EG+ + ++ ++ LC G A L + +G P ++L+ G R
Sbjct: 399 SEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVS 458
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ + ++D GF+P+ + ++ + RK R
Sbjct: 459 DATVTLYGLVDTGFMPEARCWARLIESVFRERKLRR 494
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F + ++ F MRK + P+ Y LING K E + A G ++ M
Sbjct: 269 YNLLIGGFCRLGQVEKAQSIFGFMRK-NECEPNAFNYATLINGHCKKGEVEAARGVFEEM 327
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R V+PD V++ L+ CR+ D + L +EM +KGC +VV++N L+ G +R+
Sbjct: 328 IRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRI 387
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + ++ G + + + I+++ LC+ G + KA L+ RG +P L
Sbjct: 388 AEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNML 447
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ LC G A + L G +P LIE + R RK + L++ ++ EG
Sbjct: 448 LIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIESVFRERKLRRSIELLDVLIAEG 506
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 15/270 (5%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
F +F D D T+ ++ + + S+ F+ N C
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECE----------- 298
Query: 153 MERIFHFA--VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
F++A +N K + FE M + +P Y L+ + D+ +
Sbjct: 299 -PNAFNYATLINGHCKKGEVEAARGVFEEMIR-SGVQPDAVSYTSLVGCLCRHGNVDEGI 356
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M + K DVVT+N+L+ G C++++ A+ L ++ +G NV S+ ++
Sbjct: 357 NLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCL 416
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ ++ + M+ G +L+ GLC+ GRV A + G +P+
Sbjct: 417 CSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEA 476
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+ L+E + E ++E++D L +G
Sbjct: 477 RCWARLIESVFRERKLRRSIELLDVLIAEG 506
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 235/557 (42%), Gaps = 111/557 (19%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTL-PSVTLTPTAHHTH---------LLRFLKTHLLTPTN 66
SP P P P + ETP V P A H + R + T T
Sbjct: 49 SPGPKPDP------KTETPNVAQEKQYQRIPRAKQQHRSPEKLEDIICRMMANRDWT-TR 101
Query: 67 NQITPSSLL----HFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
Q + +L+ H L + H + + F W +HD T + I++ L
Sbjct: 102 LQNSIRALVPEFDHSLVYNVLHGARKPDHALQFFRWVERAGLIQHDRETHMKIIQILGR- 160
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEM-ERIFHFAVNAFVKANRMNDGLLAFEAMR 181
+S+LN C D E+ E +F ++++ KA + + + F M+
Sbjct: 161 ------YSMLNHAR---CIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMK 211
Query: 182 KL-----------------IDGR-----------------PSVSIYNVLINGFVKCREFD 207
+L GR P+ YNVLI GF
Sbjct: 212 ELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLR 271
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A+ FY+ M + PDVVT+N +I+G+ R+K+ + A LF EM+ K P V+S+ T+I
Sbjct: 272 TAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMI 331
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
+G+F + ++G+ + EM +G + ++VT L+ LC+ G++ +A +++ + RR +
Sbjct: 332 KGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIA 391
Query: 328 PKDFDYF-GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA-CTTLIEGLRRLRKGVEAS 385
PKD F L+ C G+ A++V+D + K ++PS LIE + + +A
Sbjct: 392 PKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKL-SIPSEAGHYGVLIENFCKAEEYDQAV 450
Query: 386 GLMEKMLKEGIL--PDSV------TFNCLLEDLCDVGRTVDADRL--RLLAS-------- 427
++K+++ I+ P S +N +++ LC G+T A+ L +LL
Sbjct: 451 KFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVEDPLAF 510
Query: 428 ------------------------TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD 463
KG+ D Y +L+ Y R+ + + ++ M++
Sbjct: 511 NNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIE 570
Query: 464 EGFIPDLATYNSYMDGL 480
+G +PD + + S M+ L
Sbjct: 571 DGHLPDSSVFRSVMESL 587
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 17/283 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+ + +R+NDGL E M K + +P+ Y L+ + +A MVR R
Sbjct: 331 IKGYFAVDRINDGLRLLEEM-KSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRR 389
Query: 221 VKP-DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P D F L++ C+ A+ + M + + LI F ++D+
Sbjct: 390 IAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQA 449
Query: 280 VNMAYEMIE--------LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
V ++IE E S ++ LC+ G+ KA L ++GV
Sbjct: 450 VKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGV----E 505
Query: 332 DYFGLVEKLCG---EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLM 388
D +CG EG A E++ + +KG A LIE R + +A +
Sbjct: 506 DPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTAL 565
Query: 389 EKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
+ M+++G LPDS F ++E L + GR A R+ KG+
Sbjct: 566 DSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGV 608
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 147/349 (42%), Gaps = 54/349 (15%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS-VSIYNVLINGFVKCREFDK 208
P+ IF +N+ KA + + + M KL PS Y VLI F K E+D+
Sbjct: 391 APKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKL--SIPSEAGHYGVLIENFCKAEEYDQ 448
Query: 209 ALGFYDRMVRDRV--KPDVV------TFNILISGFCRNKKFDLALGLFREMREKGCNPNV 260
A+ F D+++ + + +P +N +I C + + A LFR++ +KG +
Sbjct: 449 AVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVE-DP 507
Query: 261 VSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID 320
++FN LI C G EG A E++
Sbjct: 508 LAFNNLI------------------------------C-----GHAKEGTPDSAFEILKI 532
Query: 321 FSRRGVLPKDFD-YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
R+G+ P+D D Y L+E +G A +D + + G+LP +++E L
Sbjct: 533 MGRKGI-PRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDG 591
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA-DRLRLLASTKGLDPDGMTY 438
+ AS +M+ M+++G+ + +LE L G +A R+ LL S++ + +
Sbjct: 592 RVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQC----NVNF 647
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
L+S + + + L++ L D +Y+ +D L A K++
Sbjct: 648 DSLLSILSEKGKTIAALKLLDFGLQRDCDIDFKSYDKVLDALLAAGKTL 696
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 6/204 (2%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M + G E +L+D G V ++ ++ GV Y L + + +G
Sbjct: 174 DMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKG 233
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEGILPDSV 401
+A +++ +G P+ LI G RLR V E M GI PD V
Sbjct: 234 RYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVR---FYEDMKVRGISPDVV 290
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N ++ R +A++L K + P ++Y ++ GY +R +G L+ EM
Sbjct: 291 TYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEM 350
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
G P+ TY + + L +A K
Sbjct: 351 KSVGIKPNNVTYTTLLPDLCDAGK 374
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE--FDKALGFYDRMV 217
++A K R N+ F++M ++ G +P + Y+ +++G+ + ++ M+
Sbjct: 281 IHALFKHGRTNEAKCIFDSM--VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 338
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ P+ FNILI+ + R D A+ +F +M+ KG P+ V+F T+I + D
Sbjct: 339 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 398
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF-GL 336
+ ++ M+++G S L+ G CN G ++KA EL+ + + + P YF +
Sbjct: 399 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 458
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC EG +++D + + G P+V+ +L+EG + EA L++ M GI
Sbjct: 459 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 518
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ + L++ C GR DA + KG+ P + Y I++ G + R +
Sbjct: 519 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 578
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +EM++ G + TY + GL
Sbjct: 579 MFHEMIESGTTVSIHTYGVVLGGL 602
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 38/330 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + I N +I K +E DKA +MV + PD+ T++++I G C++K D A +
Sbjct: 167 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 226
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M E G PN +++N+LI G+ ++E V + +M G + C + L
Sbjct: 227 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 286
Query: 308 EGRVLKA-CEL-----------VIDFS-------------------------RRGVLPKD 330
GR +A C +I +S +G+ P
Sbjct: 287 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 346
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L+ G A+ + +++ KG +P + T+I L R+ + +A
Sbjct: 347 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 406
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY-HILVSGYTREN 449
M+ G+ P + CL++ C+ G V A L K + P G+ Y +++ +E
Sbjct: 407 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 466
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R EG+++++ M+ G P++ T+NS M+G
Sbjct: 467 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 496
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 3/295 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN+LI+ + + D L R++++ + PD +++ LI GF ++ + D A L
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P ++ N++I+ ++ D+ ++ +M++ G T +++DGLC
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA ++ G P Y L+ G ++ V ++ G +P+V
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL--L 425
C + I L + + EA + + M+ +G PD ++++ +L + AD + L
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG+ P+ ++IL++ Y R + + +M ++G IPD T+ + + L
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 391
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +++ + R++D L F M I PS ++Y LI G E KA M
Sbjct: 384 FATVISSLCRIGRLDDALHKFNHMVD-IGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442
Query: 217 V-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +D P V F+ +I+ C+ + + M + G PNVV+FN+L+ G+
Sbjct: 443 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 502
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M +G E + LVDG C GR+ A + D +GV P Y
Sbjct: 503 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 562
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ L A ++ E+ + G S+ ++ GL R EA+ L+EK+
Sbjct: 563 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 622
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +TFN ++ + VGR +A L ST GL P+ TY ++++ +E +E +
Sbjct: 623 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD 682
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
NL + G D N + L N + + +
Sbjct: 683 NLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 717
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI GFVK E DKA + M+ V P ++ N +I C+ K+ D A + ++M + G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P++ +++ +I G + D+ + +M+E G +S+T L+ G G ++
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ S GV+P + + L G A + D + KG P +I+ +T++ G
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319
Query: 376 RRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+ + ML +GI P+ FN L+ G A + KG+ P
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 379
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
D +T+ ++S R R + + N M+D G P A Y + G N + V+
Sbjct: 380 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 434
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 158/387 (40%), Gaps = 75/387 (19%)
Query: 180 MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
++K++D P + Y+++I+G K + DKA ++MV +P+ +T+N LI G+
Sbjct: 192 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 251
Query: 238 NKKFDLALGLFREMRE-----------------------------------KGCNPNVVS 262
+ ++ ++ +F++M KG P+++S
Sbjct: 252 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 311
Query: 263 FNTLIRGFFGERK-------------------------------------FDEGVNMAYE 285
++T++ G+ D+ + + +
Sbjct: 312 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 371
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M G +VT ++ LC GR+ A GV P + Y L++ C G
Sbjct: 372 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 431
Query: 346 AGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A E++ E+ K P V +++I L + + E +M+ M++ G P+ VTFN
Sbjct: 432 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 491
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+E C VG +A L ++ G++P+ Y LV GY + R + + +ML +
Sbjct: 492 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 551
Query: 465 GFIPDLATYNSYMDGLSNARKSVRQTR 491
G P Y+ + GL AR++ +
Sbjct: 552 GVKPTSVLYSIILHGLFQARRTTAAKK 578
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 1/302 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P + F +N K R+ +G + M + RP+V +N L+ G+ ++A
Sbjct: 449 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ-TGQRPNVVTFNSLMEGYCLVGNMEEAF 507
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
D M ++P+ + L+ G+C+N + D AL +FR+M KG P V ++ ++ G
Sbjct: 508 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 567
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F R+ M +EMIE G S T +++ GLC +A L+ V
Sbjct: 568 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 627
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ ++ + G A E+ D + G +P++ + +I L + EA L
Sbjct: 628 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 687
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ K G DS N ++ L + A + L + T +L S ++RE
Sbjct: 688 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGM 747
Query: 451 RK 452
K
Sbjct: 748 IK 749
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ L +V L K G P + +LI G + + +A L +M+++G+LP + N ++
Sbjct: 118 LGLAIVGRLLKNGLGPDDFS-YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSII 176
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
++LC + A+ + G+ PD TY +++ G + + E ++ +M++ G
Sbjct: 177 KELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTR 236
Query: 468 PDLATYNSYMDGLS 481
P+ TYNS + G S
Sbjct: 237 PNSITYNSLIHGYS 250
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + ++I+ +VSI Y V++ G + D+A +++ VK D++TFNI+IS
Sbjct: 576 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 635
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
+ + A LF + G PN+ +++ +I E ++E N+ + + G
Sbjct: 636 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 695
Query: 294 SSVTCEILVDGLCNEGRVLKAC---------ELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
S +V L N+ V KA L ++ S +L F G+++ L G
Sbjct: 696 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTA 755
Query: 345 NA 346
A
Sbjct: 756 PA 757
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 6/327 (1%)
Query: 162 NAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+A +AN+++ LAF AMR L+ P V N I+ ++ + + A+ F+ +M R
Sbjct: 141 SACARANKLSQATLAFRAMRAHGLL---PRVESCNTFISAALRLKRPEIAVAFFRQMRRC 197
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF-GERKFDE 278
+ PD T N++++ FC + A + EM E G VVSFNTLI + G +
Sbjct: 198 CISPDTYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLEN 257
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + M + GC +VT ++ GLC E ++ +A +L+I+ V P Y L+
Sbjct: 258 ALELKRRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNMLIH 317
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
G+ A V +E+ K G ++ TLI GL R K E+ L++++ K G+ P
Sbjct: 318 GHVMLGDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEP 377
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
++ TF L+ + A +L + G P+ T+ I+VS + + + +++
Sbjct: 378 NASTFAALITGHWKTQNSERALQLLNVMKKSGFHPNYDTFKIVVSTFCKNKDFEGAVDVM 437
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
++L PD A + + DGLS A+K
Sbjct: 438 KDILGRCMAPDKALLHEFFDGLSKAKK 464
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
++L S R K A FR MR G P V S NT I ++ + V +M
Sbjct: 136 IDVLFSACARANKLSQATLAFRAMRAHGLLPRVESCNTFISAALRLKRPEIAVAFFRQMR 195
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNA 346
+ T +++ C GRV A +++ + GV + L+ C G G
Sbjct: 196 RCCISPDTYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGL 255
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
ALE+ + K+G P + T+I GL + R+ +A+ L+ +M + P++VT+N L
Sbjct: 256 ENALELKRRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNML 315
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ +G A R+R GL D +TY+ L+ G RE + KE E+L+ E+ G
Sbjct: 316 IHGHVMLGDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGL 375
Query: 467 IPDLATYNSYMDGLSNARKSVR 488
P+ +T+ + + G + S R
Sbjct: 376 EPNASTFAALITGHWKTQNSER 397
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 4/323 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE--FDKALGFYDRMVR 218
++A K R N+ F++M L +P + Y+ +++G+ + ++ M+
Sbjct: 357 IHALFKHGRTNEAKCIFDSM-VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLT 415
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+ P+ FNILI+ + R D A+ +F +M+ KG P+ V+F T+I + D+
Sbjct: 416 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 475
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF-GLV 337
++ M+++G S L+ G CN G ++KA EL+ + + + P YF ++
Sbjct: 476 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 535
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC EG +++D + + G P+V+ +L+EG + EA L++ M GI
Sbjct: 536 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 595
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ + L++ C GR DA + KG+ P + Y I++ G + R + +
Sbjct: 596 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 655
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
+EM++ G + TY + GL
Sbjct: 656 FHEMIESGTTVSIHTYGVVLGGL 678
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 38/330 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + I N +I K +E DKA +MV + PD+ T++++I G C++K D A +
Sbjct: 243 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 302
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M E G PN +++N+LI G+ ++E V + +M G + C + L
Sbjct: 303 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 362
Query: 308 EGRVLKA-CEL-----------VIDFS-------------------------RRGVLPKD 330
GR +A C +I +S +G+ P
Sbjct: 363 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 422
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L+ G A+ + +++ KG +P + T+I L R+ + +A
Sbjct: 423 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 482
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY-HILVSGYTREN 449
M+ G+ P + CL++ C+ G V A L K + P G+ Y +++ +E
Sbjct: 483 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 542
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R EG+++++ M+ G P++ T+NS M+G
Sbjct: 543 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 572
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 3/295 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN+LI+ + + D L R++++ + PD +++ LI GF ++ + D A L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P ++ N++I+ ++ D+ ++ +M++ G T +++DGLC
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA ++ G P Y L+ G ++ V ++ G +P+V
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL--L 425
C + I L + + EA + + M+ +G PD ++++ +L + AD + L
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG+ P+ ++IL++ Y R + + +M ++G IPD T+ + + L
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 467
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +++ + R++D L F M I PS ++Y LI G E KA M
Sbjct: 460 FATVISSLCRIGRLDDALHKFNHMVD-IGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 518
Query: 217 V-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +D P V F+ +I+ C+ + + M + G PNVV+FN+L+ G+
Sbjct: 519 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 578
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M +G E + LVDG C GR+ A + D +GV P Y
Sbjct: 579 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 638
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ L A ++ E+ + G S+ ++ GL R EA+ L+EK+
Sbjct: 639 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 698
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +TFN ++ + VGR +A L ST GL P+ TY ++++ +E +E +
Sbjct: 699 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD 758
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
NL + G D N + L N + + +
Sbjct: 759 NLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 793
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI GFVK E DKA + M+ V P ++ N +I C+ K+ D A + ++M + G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P++ +++ +I G + D+ + +M+E G +S+T L+ G G ++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ S GV+P + + L G A + D + KG P +I+ +T++ G
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395
Query: 376 RRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+ + ML +GI P+ FN L+ G A + KG+ P
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 455
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
D +T+ ++S R R + + N M+D G P A Y + G N + V+
Sbjct: 456 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 510
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 1/303 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P + F +N K R+ +G + M + RP+V +N L+ G+ ++A
Sbjct: 525 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ-TGQRPNVVTFNSLMEGYCLVGNMEEAF 583
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
D M ++P+ + L+ G+C+N + D AL +FR+M KG P V ++ ++ G
Sbjct: 584 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 643
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F R+ M +EMIE G S T +++ GLC +A L+ V
Sbjct: 644 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 703
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ ++ + G A E+ D + G +P++ + +I L + EA L
Sbjct: 704 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 763
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ K G DS N ++ L + A + L + T +L S ++RE +
Sbjct: 764 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 823
Query: 451 RKE 453
+E
Sbjct: 824 YRE 826
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 158/387 (40%), Gaps = 75/387 (19%)
Query: 180 MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
++K++D P + Y+++I+G K + DKA ++MV +P+ +T+N LI G+
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327
Query: 238 NKKFDLALGLFREMRE-----------------------------------KGCNPNVVS 262
+ ++ ++ +F++M KG P+++S
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387
Query: 263 FNTLIRGFFGERK-------------------------------------FDEGVNMAYE 285
++T++ G+ D+ + + +
Sbjct: 388 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M G +VT ++ LC GR+ A GV P + Y L++ C G
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507
Query: 346 AGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A E++ E+ K P V +++I L + + E +M+ M++ G P+ VTFN
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 567
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+E C VG +A L ++ G++P+ Y LV GY + R + + +ML +
Sbjct: 568 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 627
Query: 465 GFIPDLATYNSYMDGLSNARKSVRQTR 491
G P Y+ + GL AR++ +
Sbjct: 628 GVKPTSVLYSIILHGLFQARRTTAAKK 654
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ L +V L K G P + +LI G + + +A L +M+++G+LP + N ++
Sbjct: 194 LGLAIVGRLLKNGLGPDDFS-YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSII 252
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
++LC + A+ + G+ PD TY +++ G + + E ++ +M++ G
Sbjct: 253 KELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTR 312
Query: 468 PDLATYNSYMDGLS 481
P+ TYNS + G S
Sbjct: 313 PNSITYNSLIHGYS 326
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 1/317 (0%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE 205
G+ C + ++ K R++ + M K P+V Y ++++ F K
Sbjct: 338 GLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK-KGFAPNVVTYTIVLHSFCKNGM 396
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
+D + M + + +N +I C++ + D A+GL +EMR +GCNP++ S+NT
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I + +E +M ++E G + +T ++ L +GR A L + G
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
Y GL++ +C +GN +L +++E+ +KG P+ ++ LI L + R+ +A
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
L ++ML +G+ PD VT+N L+ LC +G A L + + PD +TY+IL+S +
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636
Query: 446 TRENRRKEGENLVNEML 462
+ + L+N +
Sbjct: 637 CKVRLLDDAAMLLNRAM 653
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 150/292 (51%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
+V ++N +I G + + +A Y+ M +PD T++IL+ G C+ + A+ L
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
REM +KG PNVV++ ++ F +D+ + EM G +S ++ LC +
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 429
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
GR+ +A L+ + +G P Y ++ LC A + + L ++G + + I
Sbjct: 430 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 489
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T+I L R + +A L ++M+ G D V++N L++ +C G + L +
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG+ P+ ++Y+IL+S +E R ++ L +ML++G PD+ TYN+ ++GL
Sbjct: 550 KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 152/325 (46%), Gaps = 2/325 (0%)
Query: 151 PEMERI-FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
PE+ + F+ + + ++ + +E M L +P Y++L++G K A
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRISSA 365
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ M + P+VVT+ I++ FC+N +D L EM KG N +N +I
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
+ + DE + + EM GC + ++ LCN ++ +A + + GV+
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
Y ++ L +G A+ + E+ G V++ LI+ + + + L+E
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
+M ++GI P++V++N L+ +LC R DA L +GL PD +TY+ L++G +
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 450 RRKEGENLVNEMLDEGFIPDLATYN 474
NL+ ++ +E PD+ TYN
Sbjct: 606 WMHAALNLLEKLHNENVHPDIITYN 630
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ L RL + EA L+ M + G +PD+V + ++ LCD G +A L
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
G D T+ +V G R +E LV+ M+ +G +P + TY + GL
Sbjct: 233 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292
Query: 483 ARKS 486
R++
Sbjct: 293 VRQA 296
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 191/434 (44%), Gaps = 24/434 (5%)
Query: 62 LTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWA-STIDSFRHDHTTFLFIVRSLA 120
+ P ++ P L+ + + Q IF +A + F H++ T+ I+ L+
Sbjct: 38 IKPWPQRLFPKRLVSMITQQ-----QNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS 92
Query: 121 SSYRFSELHSVLNFI--SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+ F + S++ + S P C E +F + + A R + F
Sbjct: 93 RARAFDPVESLMADLRNSYPPIKCG----------ENLFIDLLRNYGLAGRYESSMRIFL 142
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD-RVKPDVVTFNILISGFCR 237
+ R SV N L+N ++ + FD + + P++ T N+L+ C+
Sbjct: 143 RIPDFGVKR-SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCK 201
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ A + E+ G PN+V++ T++ G+ + + EM++ G ++T
Sbjct: 202 KNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAIT 261
Query: 298 CEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELW 357
+L+DG C GR +A ++ D + + P + Y ++ LC E +G A + DE+
Sbjct: 262 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 321
Query: 358 KKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTV 417
+ +P C +I+ L K EA GL KMLK +PD+ + L+ LC GR
Sbjct: 322 DRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVS 381
Query: 418 DADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+A +L KG P +TY+ L++G + E L ++M + P+ TYN +
Sbjct: 382 EARKL-FDEFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLI 440
Query: 478 DGLS---NARKSVR 488
+GLS N ++ VR
Sbjct: 441 EGLSKNGNVKEGVR 454
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
Query: 159 FAVNAFVKA-NRMNDGLLAFEAMRKLIDGRPSVSI------YNVLINGFVKCREFDKALG 211
F N VKA + ND E+ K++D P++ + Y ++ G+V + + A
Sbjct: 190 FTCNLLVKALCKKND----IESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKR 245
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+ M+ PD +T+ +L+ G+C+ +F A + +M + PN V++ +IR
Sbjct: 246 VLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 305
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF 331
E+K E NM EM++ S C ++D LC + +V +AC L + +P +
Sbjct: 306 KEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 365
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
L+ LC EG A ++ DE + KG++PS++ TLI G+ + EA L + M
Sbjct: 366 LLSTLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 424
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
+ P++ T+N L+E L G + R+ G P+ T+ IL G + +
Sbjct: 425 FERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKE 484
Query: 452 KEGENLVN 459
++ +V+
Sbjct: 485 EDAIKIVS 492
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P Y VL++G+ K F +A D M ++ ++P+ VT+ ++I C+ KK A +
Sbjct: 257 PDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 316
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM ++ P+ +I + K DE + +M++ C + L+ LC
Sbjct: 317 FDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 376
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGRV +A +L +F + G +P Y L+ +C +G A + D+++++ P+
Sbjct: 377 EGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFT 435
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LIEGL + E ++E+ML+ G P+ TF L E L +G+ DA ++ +A
Sbjct: 436 YNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAV 495
Query: 428 TKGLDPDGMTYHILVSGYTRE 448
G D ++ + ++ + E
Sbjct: 496 MNG-KVDKESWELFLNKFVGE 515
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 2/235 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++ + K R ++ + M K + P+ Y V+I K ++ +A +D M+
Sbjct: 266 MDGYCKLGRFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRS 324
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
PD +I C + K D A GL+R+M + C P+ +TLI E + E
Sbjct: 325 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEAR 384
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ ++ + G S +T L+ G+C +G + +A L D R P F Y L+E L
Sbjct: 385 KL-FDEFDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGL 443
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
GN + V++E+ + G P+ L EGL++L K +A ++ + G
Sbjct: 444 SKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG 498
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 2/161 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P ++ + LI+ K +A +D + + P ++T+N LI+G C + A L
Sbjct: 362 PDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSI-PSLLTYNTLIAGMCEKGELTEAGRL 420
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+ +M E+ C PN ++N LI G EGV + EM+E GC + T IL +GL
Sbjct: 421 WDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQK 480
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
G+ A ++V G + K+ + + K GE + G+
Sbjct: 481 LGKEEDAIKIVSMAVMNGKVDKE-SWELFLNKFVGELDKGV 520
>gi|296089845|emb|CBI39664.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 202/465 (43%), Gaps = 69/465 (14%)
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQF----THYDFH----IFAWASTIDSFRHDHTTFLFI 115
P +N+ P FL+++L T +D + +F WAS FRH T+ +
Sbjct: 23 PNDNEFEPK--FQFLRNRLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRV 80
Query: 116 VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLL 175
+ L + ++ + CS CP E +++FVK R+++ +
Sbjct: 81 ILKLGMGGKIEDMEAF----------CSEMVREKCPGGEETLIALISSFVKHRRLSEAIR 130
Query: 176 AFEAMRKLIDG-RPSVSIYNVLINGFVKCR-EFDKALGFYDRMVRDRVKPDVVTFNILIS 233
M +G + S+ +N L+ V+ R +F + L Y +V+ + P+V T N LI
Sbjct: 131 VLVIMTS--NGYKFSIIEFNGLLGALVRERRDFREILLVYKEIVKAGIVPNVDTLNYLIE 188
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE- 292
DLAL +R M +KGC+PN +F+ LI G ++ V + EMIEL CE
Sbjct: 189 ALFELNWIDLALDQYRRMSKKGCSPNSKTFDILISGLIARNLVEKSVVVLGEMIELECEA 248
Query: 293 ----FSSVT---CEI--LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++SV C + LV+ LC R+ +A E+ S G K L++ +C
Sbjct: 249 DLSFYTSVIPLFCSVHQLVETLCQMERIQEAAEVFCYMSSNGCALKSSSLDMLMKGICVT 308
Query: 344 GNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTF 403
G A+ ++ G + + ++ GL +L K + ++ KML EG + D +
Sbjct: 309 GKVDEAIRLLVLACYSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEGCILDVEAY 368
Query: 404 NCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT-------------------------- 437
L++ +C + RT D R L ++GL PD T
Sbjct: 369 CILVQSMCALSRTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLAS 428
Query: 438 ---------YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
Y++L+ G +E + E L++ ML++G++PD +T+
Sbjct: 429 DGEILNSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTH 473
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 199/484 (41%), Gaps = 64/484 (13%)
Query: 13 IHNKSPPPPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTN------ 66
+ N S PPP P + + + L P+ + +L L +N
Sbjct: 52 VFNSSSLPPPEWIEPFN---DVSDLVKSNRNLQPSPWVSQILNLLDGSASMESNLDGFCR 108
Query: 67 ---NQITPSSLLHFLKS-KLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASS 122
+++P+ + LKS ++ P + F W+ + H+ ++ +V LA +
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKPDIA---WSFFCWSRKQKKYTHNLECYVSLVDVLALA 165
Query: 123 YRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRK 182
+ + CS F P + + +F K + + L + M++
Sbjct: 166 KDVDRIRFI----------CSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKE 215
Query: 183 LIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
+G P++ YN L+NG V D A ++ M R+KPDVVT+N +I G+C+ +
Sbjct: 216 --NGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQT 273
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
AL R M KG + +++ T+I+ + + F V + EM E G + ++
Sbjct: 274 QKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLV 333
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ GLC EG++ N G A V + + +KG+
Sbjct: 334 IGGLCKEGKL---------------------------------NEGYA--VFENMIRKGS 358
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V T LI+G + +A L+ +M+ EG PD VT++ ++ LC GR +A
Sbjct: 359 KPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMD 418
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
GL + M Y L+ G + R E E L EM ++G D YN+ +D +
Sbjct: 419 YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 482 NARK 485
K
Sbjct: 479 KHGK 482
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 11/315 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F + K ++N+G FE M RK +P+V+IY VLI+G+ K + A+ R
Sbjct: 330 FSLVIGGLCKEGKLNEGYAVFENMIRK--GSKPNVAIYTVLIDGYAKTGSVEDAIRLLHR 387
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ + PDVVT++++++G C+N + + A+ F+ R G N + +++LI G +
Sbjct: 388 MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 447
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR----RGVLPKDF 331
DE + EM E GC S L+D G+V +A L F R G +
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALAL---FKRMEEEEGCDQTVY 504
Query: 332 DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM 391
Y L+ + E AL++ D + KG P+ L GL K A +++++
Sbjct: 505 TYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDEL 564
Query: 392 LKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
G++ D+ + ++ LC GR +A +L + +G + G ++++ + +
Sbjct: 565 APMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 452 KEGENLVNEMLDEGF 466
L++ + G+
Sbjct: 624 DLAMKLMHSKIGIGY 638
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 12/264 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI-YNVLINGFVKCREFDKALGFYDR 215
+ VN K R+ + + F+ R +G S+ Y+ LI+G K D+A ++
Sbjct: 400 YSVVVNGLCKNGRVEEAMDYFQTCR--FNGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK-GCNPNVVSFNTLIRGFFGER 274
M D +N LI F ++ K D AL LF+ M E+ GC+ V ++ LI G F E
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEH 517
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E + + MI+ G ++ L GLC G+V +AC+++ + + GV+ D
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVIL-DAACE 576
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEKML- 392
++ LC G A ++ D + ++G +P I T +I LR++ K A LM +
Sbjct: 577 DMINTLCKAGRIKEACKLADGITERGREVPGRIR-TVMINALRKVGKADLAMKLMHSKIG 635
Query: 393 ----KEGILPDSVTFNCLLEDLCD 412
+ G + V F LLE D
Sbjct: 636 IGYERMGSVKRRVKFTTLLETCFD 659
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 36/176 (20%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C ++ ++AF K ++++ L F+ M + +V Y +LI+G K ++A
Sbjct: 463 CTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEA 522
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
L +D M+ + P L +G C + K A + E+ G
Sbjct: 523 LKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGV------------- 569
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
CE +++ LC GR+ +AC+L + RG
Sbjct: 570 -----------------------ILDAACEDMINTLCKAGRIKEACKLADGITERG 602
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 9/329 (2%)
Query: 157 FHFAVNAFVKANRMND--GLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+ + K R++D GLL +R ++ PSV YN +I+G+ K ALG
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVV---PSVWTYNAMIDGYCKSGRMKDALGIKA 343
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M ++ PD T+N LI G C K D A L +G P V++F LI G+
Sbjct: 344 LMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ + + MI C+ +L++ L + R+ +A E + + G+ P Y
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYT 462
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+++ C G G ALEV + +G P+ +LI GL + +K +A L+ KM ++
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
GI P +T+ L++ C +A RL + GL PD Y++L + R +E
Sbjct: 523 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 582
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ ++ +G + TY S +DG S A
Sbjct: 583 YSF---LVRKGVVLTKVTYTSLVDGFSKA 608
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 39/354 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + KA R++D L M + + + Y VLIN +K +A + M +
Sbjct: 395 INGYCKAERIDDALRVKSNMIS-SNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+VVT+ +I G+C+ AL +F+ M +GC+PN ++ +LI G ++K + +
Sbjct: 454 LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M E G +T L+ G C + A L + G+ P + Y L + L
Sbjct: 514 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDAL 573
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G A E L +KG + + + T+L++G + A+ L+EKM+ EG D
Sbjct: 574 CKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630
Query: 401 VTFNCLLEDLCDVGR-----------TVDADRLRLLAST--------------------- 428
T++ LL+ LC + TV + ++A T
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690
Query: 429 ---KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
G P TY + +S Y + R +E E+L+ EM +G PD+ TYN +++G
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFING 744
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 1/292 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P YN +I + K A ++ + ++ D T N L+ G+CR A L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M GC N S+ LI+G R E + + + M+ GC + T +L+ GLC
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EGR+ A L+ + RGV+P + Y +++ C G AL + + + G P
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+LI GL K EA L+ + G P +TF L+ C R DA R++
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ D Y +L++ ++ R KE + +NEM G P++ TY S +DG
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDG 467
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 1/300 (0%)
Query: 180 MRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
M L+ R + Y +LI G + R +AL MV D ++ T+ +LI G C+
Sbjct: 239 MMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEG 298
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ A GL EM +G P+V ++N +I G+ + + + + M + GC T
Sbjct: 299 RIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYN 358
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
L+ GLC G++ +A EL+ RG P + L+ C AL V +
Sbjct: 359 SLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISS 417
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
+ A LI L + + EA + +M G+ P+ VT+ +++ C VG A
Sbjct: 418 NCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAA 477
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ L +G P+ TY L+ G ++ + + L+ +M ++G P + TY + + G
Sbjct: 478 LEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQG 537
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 26/348 (7%)
Query: 154 ERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
E+ ++ +A K+ R + +F + ++ + + Y L++GF K D A
Sbjct: 563 EQAYNVLTDALCKSGRAEEAY-SFLVRKGVVLTKVT---YTSLVDGFSKAGNTDFAAVLI 618
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
++MV + K D+ T+++L+ C+ KK + AL + +M G N+V++ +I E
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K D ++ EMI G + S+ T + + C GR+ +A L+ + R GV P Y
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTY 738
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG-------VEASG 386
+ G G+ G L + + C T L+ K V+ SG
Sbjct: 739 NIFIN---GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSG 795
Query: 387 ------------LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L+E+M+K G+ P VT++ ++ C R +A L K + P+
Sbjct: 796 MWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 855
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
Y +L+ + + V +M++ GF P L +Y+ + GL +
Sbjct: 856 EEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCD 903
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 138/331 (41%), Gaps = 22/331 (6%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ K + ++ FE M + +G P YNVL + K ++A F +VR
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEQ--NGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRK 589
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V VT+ L+ GF + D A L +M +GC ++ +++ L++ ++K +E
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEA 649
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+++ +M G + + V I++ + EG+ A L + G P Y +
Sbjct: 650 LSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISS 709
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C G A ++ E+ + G P V+ I G + A +++M+ P+
Sbjct: 710 YCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPN 769
Query: 400 SVTFNCLLE-------------DLCDVGRTVDADRLRLLAS---TKGLDPDGMTYHILVS 443
T+ LL+ D + ++ + + L GL+P +TY +++
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIA 829
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
G+ + R +E L++ ML + P+ Y
Sbjct: 830 GFCKATRLEEACVLLDHMLGKDISPNEEIYT 860
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 42/313 (13%)
Query: 179 AMRKLIDGRPSVSIYNVLINGFVKC-------REFDKALGFYDRMVRDRVKPDVVTFNIL 231
A+ +L+ R + + Y+ L+ + C RE A+ R+ R+ +N+
Sbjct: 91 ALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLA 150
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
+ R + L+ + ++G P+ V++NT+I + + + E G
Sbjct: 151 LRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGM 210
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
+ + TC L+ G C + KAC L++ G ++ Y
Sbjct: 211 QMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSY------------------ 252
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
T LI+GL R EA L+ M+ +G + T+ L++ LC
Sbjct: 253 -----------------TILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLC 295
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
GR DA L +G+ P TY+ ++ GY + R K+ + M G PD
Sbjct: 296 KEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDW 355
Query: 472 TYNSYMDGLSNAR 484
TYNS + GL +
Sbjct: 356 TYNSLIYGLCGGK 368
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCR----------------EFDKALGFYDRMV 217
AF +++++D P+ Y +L+ F+K E + +RM+
Sbjct: 754 AFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMM 813
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ + P VVT++ +I+GFC+ + + A L M K +PN + LI+ + F
Sbjct: 814 KHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFG 873
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+ V+ +MIE G + + L+ GLC+EG +A L D +L D+++ +
Sbjct: 874 KAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCD-----LLGMDYNHNEVA 928
Query: 338 EKLCGEG 344
K+ +G
Sbjct: 929 WKILNDG 935
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 112/293 (38%), Gaps = 66/293 (22%)
Query: 106 RHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFV 165
+ D T+ ++++L + +E S+L+ ++ + C+ + ++ +
Sbjct: 627 KADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVA----------YTIIISEMI 676
Query: 166 KANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
K + + F M + G +PS + Y V I+ + K ++A M RD V PD
Sbjct: 677 KEGKHDHAKSLFNEM--ISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPD 734
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF------------- 271
VVT+NI I+G D A + M + C PN ++ L++ F
Sbjct: 735 VVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTS 794
Query: 272 GERKFDEGVNMAYEMIEL----GCEFSSVTCEILVDGLCNEGRVLKACEL---------- 317
G + E +NM ++++E G + VT ++ G C R+ +AC L
Sbjct: 795 GMWNWIE-LNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDIS 853
Query: 318 -------------------------VIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
V D G P+ Y L+ LC EG+
Sbjct: 854 PNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGD 906
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V Y+ +I GF K ++A D M+ + P+ + +LI C K F A+
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 878
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M E G P + S++ LI G E +D ++ +++ + + V +IL DGL
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938
Query: 308 EGRV 311
G V
Sbjct: 939 AGHV 942
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K R + F++M K +P ++ Y L+ G+ + G D M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
VR+ + P+ F+ILI + + K D A+ +F +MR++G NP+ V++ T+I +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
++ + +MI+ ++ L+ LC + KA EL+++ RG+ + +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG + ++ D + + G P +I +TLI+G K EA+ L+ M+ G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+ C + R DA L + G+ PD +TY+I++ G + R +
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L + + G +L+TYN + GL
Sbjct: 606 LYVGITESGTQLELSTYNIILHGL 629
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 169/363 (46%), Gaps = 38/363 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+ A KA M+ + +M K +G P+ YN +++G+ + +A+GF +M D
Sbjct: 241 IAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD 298
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
V+PDVVT+N L+ C+N + A +F M ++G P + ++ TL++G+ + E
Sbjct: 299 GVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 358
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ M+ G + IL+ +G+V +A + ++G+ P Y ++
Sbjct: 359 HGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGI 418
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G A+ +++ + P I +LI L K +A L+ +ML GI D
Sbjct: 419 LCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLD 478
Query: 400 SVTFNCLLEDLCDVGRTVDADRL---------------------------------RLLA 426
++ FN +++ C GR +++++L +LLA
Sbjct: 479 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 538
Query: 427 S--TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
S + G+ PD +TY+ L++GY + +R ++ L EM G PD+ TYN + GL R
Sbjct: 539 SMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTR 598
Query: 485 KSV 487
++
Sbjct: 599 RTA 601
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 16/378 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSE-LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
FR D F +++ L + R S+ + VL ++ C +FS ++ +
Sbjct: 122 FRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCI---PNVFS-------YNILLKG 171
Query: 164 FVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
NR + L + M DG P V Y +INGF K + DKA G Y M+
Sbjct: 172 LCDENRSQEALELLQMMPD--DGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRG 229
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ P+VVT++ +I+ C+ + D A+ + M + G PN ++N+++ G+ + E +
Sbjct: 230 ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI 289
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+M G E VT L+D LC GR +A ++ ++RG+ P+ Y L++
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGY 349
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+G ++D + + G P+ + LI + K +A + KM ++G+ PD+
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ ++ LC GR DA R + L P + Y+ L+ ++ + + L+ E
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 461 MLDEGFIPDLATYNSYMD 478
MLD G D +NS +D
Sbjct: 470 MLDRGICLDTIFFNSIID 487
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 3/285 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ Y +LI D +++ + D + F L+ G C +K+ A+ +
Sbjct: 89 PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148
Query: 248 -FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG--CEFSSVTCEILVDG 304
R M + GC PNV S+N L++G E + E + + M + G C V+ +++G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
EG + KA + RG+LP Y ++ LC A+EV+ + K G +P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+++ G + EA G ++KM +G+ PD VT+N L++ LC GR +A ++
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
+ +GL P+ TY L+ GY + E L++ M+ G P+
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 165/366 (45%), Gaps = 13/366 (3%)
Query: 110 TTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANR 169
TT+ +++ A+ E+H +L+ + N GI P +F + A+ K +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRN-------GIH--PN-HYVFSILICAYAKQGK 389
Query: 170 MNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
++ +L F MR+ G P Y +I K + A+ ++++M+ +R+ P + +
Sbjct: 390 VDQAMLVFSKMRQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
N LI C K+D A L EM ++G + + FN++I E + E + M+
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGI 348
+G + +T L+DG C G++ +A +L+ G+ P Y L+ C
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
AL + E+ G P +I +++GL + R+ A L + + G + T+N +L
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC T +A R+ L + T++I++ + R E ++L + G +P
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
Query: 469 DLATYN 474
D+ TY+
Sbjct: 688 DVRTYS 693
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 34/192 (17%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK------------LIDG------------------ 186
++ +N + K +RM D L+ F M ++ G
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611
Query: 187 ----RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFD 242
+ +S YN++++G K D+AL + + ++ + TFNI+I + + D
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 671
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A LF + G P+V +++ + + +E ++ M E GC +S +V
Sbjct: 672 EAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIV 731
Query: 303 DGLCNEGRVLKA 314
L G + +A
Sbjct: 732 RKLLQRGDITRA 743
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 6/308 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y++L++GF + ++A+ + MV + + PD+ T+ IL+ C+ K A +
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
M + N +VV ++TL+ G+ + + + Y M ++G I+++GLC
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
RV +A L + ++ ++P Y L++ LC G ++ DE+ +G P VI
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI+ L + A L KM + I P+ TF LL+ LC VGR +A
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLL 470
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN----SYMDGLSN- 482
TKG + TY ++++G +E E L + M D G I D T+ ++ D N
Sbjct: 471 TKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDEND 530
Query: 483 -ARKSVRQ 489
A K VR+
Sbjct: 531 KAEKLVRE 538
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 142/294 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RP+V IY+++I+ K D+A Y MV + PDVVT++IL+SGFC + + A+
Sbjct: 195 RPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAID 254
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM + NP++ ++ L+ E K E N+ M++ V L+DG C
Sbjct: 255 LLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYC 314
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
V A + ++ GV P Y ++ LC AL + +E+ +K +P +
Sbjct: 315 LVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV 374
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+ L + + L ++ML G PD +T+N L++ LC G A L
Sbjct: 375 TYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM 434
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ + P+ T+ IL+ G + R K ++L +G+ ++ TY ++GL
Sbjct: 435 KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGL 488
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N ++ V + + A+ Y +M V+PD T NI+I+ FC + LA ++
Sbjct: 61 FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G PN ++ NTL++G E K E + +++ G S ++ IL++G+C G
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L+ R + P Y ++++LC + A ++ E+ KG P V+ + L+
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
G + + A L+ +M+ E I PD T+ L++ LC G+ +A+ + + ++
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D + Y L+ GY N + + M G PD+ Y+ ++GL ++
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKR 353
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 149/309 (48%), Gaps = 2/309 (0%)
Query: 174 LLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNIL 231
+LAF + K++ +P+ N L+ G + +AL F+D+++ + +++ IL
Sbjct: 110 VLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGIL 169
Query: 232 ISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGC 291
I+G C+ + A+ L R + PNVV ++ +I + DE ++ EM+ G
Sbjct: 170 INGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGI 229
Query: 292 EFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALE 351
VT ILV G C G++ +A +L+ + + P + Y LV+ LC EG A
Sbjct: 230 SPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAEN 289
Query: 352 VVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC 411
V+ + K V+ +TL++G + + A + M + G+ PD ++ ++ LC
Sbjct: 290 VLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLC 349
Query: 412 DVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA 471
+ R +A L K + PD +TY L+ + R +L +EMLD G PD+
Sbjct: 350 KIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVI 409
Query: 472 TYNSYMDGL 480
TYN+ +D L
Sbjct: 410 TYNNLIDAL 418
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ V+ F ++N + M L + P + Y +L++ K + +A M
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEM-VLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ V DVV ++ L+ G+C + + A +F M + G P+V ++ +I G ++
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE +N+ E+ + +VT L+D LC GR+ +L + RG P Y L
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC G+ A+ + +++ + P+V T L++GL ++ + A + +L +G
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ T+ ++ LC G +A L+ G D +T+ I++ + ++ + E
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEK 534
Query: 457 LVNEMLDEGFI 467
LV EM+ G +
Sbjct: 535 LVREMIARGLL 545
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 2/245 (0%)
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG-CEFSSVTCEI 300
D A+ F M P+ FN ++ +++ +++ Y+ +EL E T I
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISL-YKQMELSEVEPDYFTLNI 98
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+++ C+ G+V+ A V + G P L++ LC EG AL D++ +G
Sbjct: 99 IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
S I+ LI G+ ++ + A L+ ++ + I P+ V ++ +++ LC +A
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L KG+ PD +TY ILVSG+ + +L+NEM+ E PD+ TY +D L
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278
Query: 481 SNARK 485
K
Sbjct: 279 CKEGK 283
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 146/286 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ + YN+L++G+VK +F K+L Y MVR ++PD VT+ +LI G D+A+
Sbjct: 784 PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 843
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M +G P+ + F+ LI F + K + + M L SS T +++GL
Sbjct: 844 LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIR 903
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G + + +++ + + G+ P Y LV C G A + +E+ G +P+ +A
Sbjct: 904 KGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVA 963
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+++I GL R K EA + M++ G++P TF L+ LC + DA L+ L
Sbjct: 964 ESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLME 1023
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
L D ++Y++L++G ++ + +L EM +G P++ TY
Sbjct: 1024 LCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTY 1069
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 145/302 (48%), Gaps = 5/302 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN +++ +VK F AL + M RD V+ DV T+NI+I CR K+ A L + MR
Sbjct: 263 YNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR 322
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ P+ ++NTLI GFF E K + + M+ S T ++DG C R+
Sbjct: 323 KDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRID 382
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA ++ + GV+P + Y L+ C G A+ ++++L +G + T LI
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILI 442
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G ++ + +A +++ M ++GI PD +T++ L+ +C + + + + G+
Sbjct: 443 DGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGIL 502
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNS-----YMDGLSNARKSV 487
P+ + Y L+ Y + KE ++ G + + +N+ Y +G+ +
Sbjct: 503 PNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHF 562
Query: 488 RQ 489
RQ
Sbjct: 563 RQ 564
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + R L + MRK D P YN LINGF + + + A ++ M
Sbjct: 298 YNIMIDKLCRIKRSTRAFLLLKRMRK-DDLTPDECTYNTLINGFFREGKINHARYVFNHM 356
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R + P V T+ +I G+CRN++ D AL + EM+ G P+ ++++ L+ G+
Sbjct: 357 LRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSML 416
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + ++ G + IL+DG C G + KA +++ G+ P Y L
Sbjct: 417 GPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSAL 476
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ +C E++ + K G LP+ + TTLI + EA + + G+
Sbjct: 477 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGL 536
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ + V N LL G +A+ R S + D ++++ ++ Y +
Sbjct: 537 VANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFS 596
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ ++M+ G+ P++ TY + + GL
Sbjct: 597 VYDDMVRYGYSPNVCTYQNLLRGL 620
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 3/313 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ ++ +VK + + L ++ M RK I RP Y +LI G +C D A+ F ++
Sbjct: 789 YNILMHGYVKRGQFSKSLYLYKYMVRKGI--RPDNVTYRLLILGLSECGLIDIAVKFLEK 846
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV + + PD + F+ILI+ F K AL +F M+ +P+ +F+ +I G +
Sbjct: 847 MVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGY 906
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +EM+++G + + LV+ C G + +A L + G++P +
Sbjct: 907 LDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESS 966
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC G A+ V + + G +P+V TTL+ L + K +A L M
Sbjct: 967 IIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCR 1026
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D V++N L+ LC DA L +KGL P+ TY L R + GE
Sbjct: 1027 LRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGE 1086
Query: 456 NLVNEMLDEGFIP 468
L+ ++ + G IP
Sbjct: 1087 ELLEDIEERGLIP 1099
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 134/301 (44%), Gaps = 7/301 (2%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ LING + + + RM + + P+ V + LI +C+ AL
Sbjct: 468 PDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKH 527
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F ++ +G N V N L+ F+ E E + M + F SV+ ++D C+
Sbjct: 528 FVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCH 587
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G ++ A + D R G P Y L+ LC G+ A + + L ++P I
Sbjct: 588 RGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLL---DIPFAID 644
Query: 368 CTT---LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
T L+ G+ R EA L EKM+K LPD T+ LL C G+ + A +
Sbjct: 645 EKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQ 704
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML-DEGFIPDLATYNSYMDGLSNA 483
+ KG+ PD + Y L++G E + K + +E++ EG D YNS M+G +
Sbjct: 705 MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKS 764
Query: 484 R 484
R
Sbjct: 765 R 765
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 177/399 (44%), Gaps = 17/399 (4%)
Query: 99 ASTIDSFRHDHTTFLFI--VRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC------ 150
+S ++ D T+++ V L + S+ SVL ++ C+ IF+
Sbjct: 92 SSIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCT--AIFTSLLRTIS 149
Query: 151 ---PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
P +F V A+VK ++ D +A M VS N ++N V+ E
Sbjct: 150 RFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSC-NTILNALVEEGESK 208
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN-PNVVSFNTL 266
F + + V T NIL++ C N +F A + ++M K C+ N V++NT+
Sbjct: 209 HVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM--KSCHISNSVTYNTI 266
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ + + +F + + +M + T I++D LC R +A L+ + +
Sbjct: 267 LHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDL 326
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P + Y L+ EG A V + + ++ +PSV TT+I+G R R+ +A
Sbjct: 327 TPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALS 386
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
++ +M G++P +T++ LL C V A L ++G+ + IL+ G+
Sbjct: 387 ILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFC 446
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + + ++ M ++G PD+ TY++ ++G+ K
Sbjct: 447 QVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAK 485
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 134/301 (44%), Gaps = 5/301 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKA-LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P Y L+NG + + A F++ + ++ + D + +N L++G+ +++ +
Sbjct: 713 PDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKR 772
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +M + PN S+N L+ G+ +F + + + M+ G +VT +L+ GL
Sbjct: 773 MMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLS 832
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G + A + + G+ P + L+ + AL+V + + PS
Sbjct: 833 ECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSK 892
Query: 367 ACTTLIEGLRRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +I GL +RKG + ++ +ML+ G+ P+ + L+ C VG A RL+
Sbjct: 893 TFSAMINGL--IRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKE 950
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G+ P + ++ G R + +E + + M+ G +P +AT+ + M L
Sbjct: 951 EMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKES 1010
Query: 485 K 485
K
Sbjct: 1011 K 1011
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFV--- 201
+GIF P+ +F + AF + ++M++ L F M K + PS ++ +ING +
Sbjct: 850 EGIF--PD-RLVFDILITAFSEKSKMHNALQVFNCM-KWLHMSPSSKTFSAMINGLIRKG 905
Query: 202 ------------------------------KCR--EFDKALGFYDRMVRDRVKPDVVTFN 229
KCR E D+A + M + P V +
Sbjct: 906 YLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAES 965
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
+I G CR K + A+ +F M G P V +F TL+ E K + +++ M
Sbjct: 966 SIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELC 1025
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIA 349
V+ +L+ GLC + + A +L + +G+ P Y L + G
Sbjct: 1026 RLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNG 1085
Query: 350 LEVVDELWKKGNLPS 364
E+++++ ++G +P+
Sbjct: 1086 EELLEDIEERGLIPA 1100
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 175/380 (46%), Gaps = 37/380 (9%)
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
SA PCS C + + A K++ + + + MR P++ YNV
Sbjct: 169 SATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNV 227
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
+ING + D A +R+ +PD+V++ ++ G C +++D LF EM +K
Sbjct: 228 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 287
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PN V+F+ L+R F + + + +M + GC ++ C I+++ +C +GRV A
Sbjct: 288 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ + + G P Y ++ LC G A E++ E+ +K P+ + T I L
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 407
Query: 376 RRLRKGV--EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT----------------- 416
+KG+ +A L+E M + G VT+N L+ C GR
Sbjct: 408 --CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTI 465
Query: 417 ---------VDADRL----RLLAS--TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
A+RL LLA K + +T+++LVS + ++ +E LVN+M
Sbjct: 466 TYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 525
Query: 462 LDEGFIPDLATYNSYMDGLS 481
++ G P+L T+N+ +DG++
Sbjct: 526 MEHGCTPNLITFNTLLDGIT 545
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 183/413 (44%), Gaps = 53/413 (12%)
Query: 111 TFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRM 170
T+ ++ ++ S F E +VL+ + A C P + ++ +N + R+
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT---------PNI-VTYNVIINGMCREGRV 238
Query: 171 NDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
+D A E + +L +P + Y ++ G R +D + MV + P+ VTF
Sbjct: 239 DD---AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE 288
++L+ FCR + A+ + ++M + GC PN N +I + + D+ + M
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355
Query: 289 LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD--FDYF-------GLVEK 339
GC +++ ++ GLC GR A EL+ + R+ P + F+ F GL+E+
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415
Query: 340 --------------------------LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
C +G ALE+ + L + P+ I TTL+
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLT 472
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
GL + A+ L+ +M+++ ++VTFN L+ C G +A L G P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
+ +T++ L+ G T++ +E L++ ++ +G D TY+S +D LS ++
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 585
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 156/333 (46%), Gaps = 4/333 (1%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C + + +NA K R++D M + P Y ++ G + ++ A
Sbjct: 323 CTPNTTLCNIVINAICKQGRVDDAYDFLNNM-GMYGCNPDTISYTTVLRGLCRAGRWEHA 381
Query: 210 LGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
MVR P+ VTFN I C+ + A+ L M E GC+ +V++N L+ G
Sbjct: 382 KELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHG 441
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F + + D + + L CE +++T L+ GLC+ R+ A EL+ + ++
Sbjct: 442 FCVQGRVDSALEL---FNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLN 498
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ LV C +G A+E+V+++ + G P++I TL++G+ + EA L+
Sbjct: 499 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 558
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
++ +G+ D++T++ +++ L RT +A ++ G+ P Y+ ++ +
Sbjct: 559 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRC 618
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ + M+ G +P+ +TY ++GL++
Sbjct: 619 ETDQAIDFFAYMVSNGCMPNESTYIILIEGLAH 651
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 152/355 (42%), Gaps = 16/355 (4%)
Query: 114 FIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDG 173
++ ++ R + + LN N G++ C + + +A R
Sbjct: 332 IVINAICKQGRVDDAYDFLN----------NMGMYGCNPDTISYTTVLRGLCRAGRWEHA 381
Query: 174 L-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
L E +RK + P+ +N I + ++A+ + M +VT+N L+
Sbjct: 382 KELLPEMVRK--NCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 439
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC + D AL LF + C PN +++ TL+ G + D + EMI+ C
Sbjct: 440 HGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCP 496
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++VT +LV C +G V +A ELV G P + L++ + + N+ ALE+
Sbjct: 497 LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALEL 556
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ L KG I +++++ L R + EA ++ + G+ P +N +L LC
Sbjct: 557 LHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCK 616
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
T A + G P+ TY IL+ G E KE +++E+ +G +
Sbjct: 617 RCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ V+ F R++ L F + P+ Y L+ G D A M
Sbjct: 435 YNALVHGFCVQGRVDSALELFNNL----PCEPNTITYTTLLTGLCHAERLDAAAELLAEM 490
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + VTFN+L+S FC+ + A+ L +M E GC PN+++FNTL+ G +
Sbjct: 491 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 550
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + + + ++ G ++T +VD L E R +A +++ G+ PK Y +
Sbjct: 551 EEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI 610
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A++ + G +P+ LIEGL EA ++ ++ +G+
Sbjct: 611 LFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
Query: 397 LPDSVTFNCLLED 409
L S LLED
Sbjct: 671 LSKS-----LLED 678
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%)
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M++ GC+ S VT +L++ +C +A ++ + +G P Y ++ +C EG
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A E+++ L G P +++ TT+++GL R+ + L +M+ + +P+ VTF+
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L+ C G A ++ S G P+ +I+++ ++ R + + +N M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 466 FIPDLATYNSYMDGLSNARK 485
PD +Y + + GL A +
Sbjct: 358 CNPDTISYTTVLRGLCRAGR 377
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 194/462 (41%), Gaps = 20/462 (4%)
Query: 28 LPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQ 87
L +P T L V + H+HL+ LT + +TP + H L H
Sbjct: 21 LSLKPXTKGQDLDFVNVA----HSHLIHS-DWKKLTSLSTHLTPFRVKHILLKIQKDHV- 74
Query: 88 FTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGI 147
F W T + H T I+ L + +F +L + D +
Sbjct: 75 ---LSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKL 131
Query: 148 FS--------CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLING 199
F C R+F + + F M K P+V N ++
Sbjct: 132 FEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQM-KGYGFLPTVESCNAYLSS 190
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
+ D AL FY M R R+ P+V T N+++ FC++ K + A+ +F EM G +PN
Sbjct: 191 LLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPN 250
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
S+NTLI G+ + + V + M G E + VT L+DG C EG++ +A ++
Sbjct: 251 DTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFS 310
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ V P Y L+ GN+ + + +E+ + G ++ LI GL +
Sbjct: 311 EMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEG 370
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
K +A+ +++++ KE ++P++ TF+ L+ C + A +L G P+ T++
Sbjct: 371 KTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFN 430
Query: 440 ILVSGYTRENRRKEGENLV-NEMLDEGFIPDLATYNSYMDGL 480
+LVS + + N EG LV EM + F P + GL
Sbjct: 431 MLVSAFCK-NEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGL 471
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 11/270 (4%)
Query: 223 PDVVTFNILISGFCR--NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+++ ++L+ GF +K F+ L +R C+ + F++L + +KF
Sbjct: 112 AELILKSVLVKGFIDLPDKLFEAILYSYRM-----CDSSPRVFDSLFKTLAHMKKFRNAT 166
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M G + +C + L + RV A + R + P + ++
Sbjct: 167 DTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAF 226
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV--EASGLMEKMLKEGILP 398
C G A++V +E+ G P+ + TLI G RKG+ A L M +G+
Sbjct: 227 CKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGY--CRKGLLNSAVKLKNSMRAKGVEA 284
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
+ VTFN L++ C G+ +A ++ + P+ +TY+ L++G+++ + G L
Sbjct: 285 NVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLY 344
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
EM G D+ TYN+ + GL K+ +
Sbjct: 345 EEMSRNGVKADILTYNALILGLCKEGKTKK 374
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 148/324 (45%), Gaps = 18/324 (5%)
Query: 178 EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
E MRK P S Y+ +I + +KA + M V PDV T+ ILI FC+
Sbjct: 278 EMMRKGF--VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 238 NKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVT 297
+ A LF EMR GC+P VV++ LI + ++ + ++ + M++ GC + VT
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395
Query: 298 CEILVDGLCNEGRVLKACELVI-----------DF-----SRRGVLPKDFDYFGLVEKLC 341
LVDGLC G + KA E+ DF R + P Y LV+ LC
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A E++D + G P+ I LI+G + K A + +M K G LP
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+ L++ + GR A ++ P+ +TY ++ G R ++ L++ M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 462 LDEGFIPDLATYNSYMDGLSNARK 485
++G P++ TY + +DGL A K
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGK 599
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 173/416 (41%), Gaps = 40/416 (9%)
Query: 98 WASTID-----SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
WA +D F+ D ++ L + F E S L+ + N SC
Sbjct: 91 WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN----------SCIP 140
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALG 211
+ ++ F+K ++ M + +G P+ S++N L++ + +++ A
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMM--MTEGCNPNPSLFNSLVHSYCNEKDYAYAYK 198
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKF------DLALGLFREMREKGCNPNVVSFNT 265
+RM P V +NI I C +K DLA ++ EM C N V+
Sbjct: 199 LLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 258
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
R G KFD+ + EM+ G + T ++ LC+ +V KA L + G
Sbjct: 259 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 318
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
V P + Y L++ C G A + +E+ G P+V+ T LI + ++ +A+
Sbjct: 319 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 378
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLD----------- 432
+ +M+ G P+ VT+ L++ LC G A + +L+ ++ D
Sbjct: 379 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438
Query: 433 ---PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
P+ +TY LV G + ++ L++ ML G P+ Y++ +DG A K
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 165/400 (41%), Gaps = 65/400 (16%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLL------------AFEAMRKLIDGR----------- 187
P+ IFH V+A + N + G L AFE KLI
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434
Query: 188 -------PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
P+V Y L++G K + D A D M+ +P+ + ++ LI GFC+ K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
D A +F +M + G P+V ++ +LI F + + D + + +M++ C + VT
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
++DGLC G KA +L+ +G P Y L++ L G ++L++ ++ +KG
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 361 NLPSVIACTTLI----------------------------EGLRRLRKGVEAS-----GL 387
P+ + LI +G R +G S G+
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGY 445
+E+M G +P + + L++ GR A L ++ + D Y L+
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQAL 734
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ +E L +EM GF+P+L+ + + GL +K
Sbjct: 735 CLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKK 774
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 25/344 (7%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMV- 217
++A++KA ++ A + +++D RP+ Y L++G K KA Y +++
Sbjct: 365 IHAYLKAKQVPQ---ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421
Query: 218 ---------------RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
R + P+VVT+ L+ G C+ K D A L M GC PN +
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
++ LI GF K D + +M + G S T L+D + +GR+ A +++
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
+ P Y +++ LC G + AL+++ + +KG P+V+ T LI+GL + K
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT-YHIL 441
+ L +M ++G P+ VT+ L+ LC G +D RL L + P + Y
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG-LLDKARLLLGEMKQTYWPKYLQGYRCA 660
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+++ G ++ EM G +P Y +D S A +
Sbjct: 661 IQGFSKSFIASLG--ILEEMESYGTVPIAPVYGMLIDCFSKAGR 702
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 37/247 (14%)
Query: 175 LAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + + +++ P+V Y +I+G + E +KAL M P+VVT+ LI
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI------------RGFFGERK----- 275
G + K DL+L LF +M KGC+PN V++ LI R GE K
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWP 651
Query: 276 ----------------FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
F + + EM G + +L+D GR+ A EL
Sbjct: 652 KYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHK 711
Query: 320 DFSR--RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ V + Y L++ LC A + E+ ++G +P + LI+GL
Sbjct: 712 EMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVE 771
Query: 378 LRKGVEA 384
++K EA
Sbjct: 772 VKKWDEA 778
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 125/370 (33%), Gaps = 108/370 (29%)
Query: 222 KPDVVTFNILI---------------------SGFCRNK--------------------- 239
+P VT+N L+ SGFC ++
Sbjct: 37 RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALD 96
Query: 240 -------------------------KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
FD A+ MR C PNVV++ TL+ GF ++
Sbjct: 97 MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 156
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDF--- 331
+ + M+ GC + LV CNE A +L+ + G P
Sbjct: 157 QLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN 216
Query: 332 ---------------DYFGLVEK-----------------------LCGEGNAGIALEVV 353
D L EK LCG G A +++
Sbjct: 217 IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 276
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ +KG +P + +I L K +A L ++M G+ PD T+ L++ C
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L + G P +TY L+ Y + + + ++ + M+D G P+ TY
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396
Query: 474 NSYMDGLSNA 483
+ +DGL A
Sbjct: 397 GALVDGLCKA 406
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 105/278 (37%), Gaps = 48/278 (17%)
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
+++ G P+ V++N L++ + D G + EM E G T LC EGR
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 311 VLKACELV--IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
A +++ DF VL ++ L A+ + + +P+V+
Sbjct: 91 WADALDMIEREDFKLDTVLCTH-----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TL+ G + ++ ++ M+ EG P+ FN L+ C+ A +L +T
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205
Query: 429 KGLDPDGMTYHILVSGYTRENR-----------RKEGE---------------------- 455
G P + Y+I + + + + GE
Sbjct: 206 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 265
Query: 456 --------NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+ EM+ +GF+PD +TY+ + L +A K
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 303
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P+ + + A+ F K+ + G+L E M P +Y +LI+ F K + A+
Sbjct: 651 PKYLQGYRCAIQGFSKSFIASLGIL--EEMESY-GTVPIAPVYGMLIDCFSKAGRLEIAM 707
Query: 211 GFYDRM--VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
+ M V VK D + LI C + + A L+ EM +G P + F LI+
Sbjct: 708 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 767
Query: 269 GFFGERKFDEGVNMAYEMI-ELGCEFSSVT 297
G +K+DE + + Y + E+G S T
Sbjct: 768 GLVEVKKWDEALQLCYGICHEVGLLLSYTT 797
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 178/395 (45%), Gaps = 38/395 (9%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIF---- 148
IF + F H++ T+ I+ LA S +F + +VL+ ++ C ++GIF
Sbjct: 147 LEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCK-FHEGIFLNLM 205
Query: 149 ----SCPEMERIFHF-------------------AVNAFVKANR---------MNDGLLA 176
ER+ +N V++N+ ++
Sbjct: 206 KHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEV 265
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV-RDRVKPDVVTFNILISGF 235
E M+K P++ Y+ LING +A+ ++ MV +D++ PD +T+N LI+GF
Sbjct: 266 VEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGF 325
Query: 236 CRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSS 295
C K D AL + M++ GCNPNV +++ L+ GF E + +E + EM LG + +
Sbjct: 326 CHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDT 385
Query: 296 VTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDE 355
V L++ C GRV +A EL+ D + ++ LC EG A +++
Sbjct: 386 VGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLER 445
Query: 356 LWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR 415
L +G + + ++ L R + +A+ L+ ML G+LP T N LL LC+ G+
Sbjct: 446 LPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGK 505
Query: 416 TVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
DA L G P+ ++ +LV RE +
Sbjct: 506 VGDAVMALLGLLELGFKPEPNSWALLVELICRERK 540
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +N F +++ L E M+K +G P+V Y+ L+NGF K ++A +D
Sbjct: 318 YNALINGFCHGXKVDRALKIMEFMKK--NGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 375
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M +KPD V + LI+ FCR + D A+ L ++M E C + V+FN ++ G E +
Sbjct: 376 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGR 435
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
F+E M + G + + I+++ LC EG + KA +LV RGVLP
Sbjct: 436 FEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNE 495
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKM-LKE 394
L+ LC G G A+ + L + G P + L+E + R RK + A L++ + ++E
Sbjct: 496 LLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQE 555
Query: 395 GILPDS 400
IL +
Sbjct: 556 PILSNQ 561
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 160/352 (45%), Gaps = 36/352 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N + NR+ D + F+ + + +P+V Y LI K R + A+ +++M
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGM-GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK- 275
+ +P+VVT+N L++G C ++ A L R+M ++ PNV++F LI F K
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 276 ----------------------------------FDEGVNMAYEMIELGCEFSSVTCEIL 301
DE M Y M GC + V L
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+ G C RV ++ + S++GV+ Y L++ C G +A EV +++ +
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P + L++GL K +A + E M K + + VT+ +++ +C +G+ DA
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
L +KG+ P+ +TY ++SG+ R E ++L +M ++GF+P+ + Y
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 145/298 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + + L+NG+ + A+ +D+++ KP+VVT+ LI C+N+ + A+ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M G PNVV++N L+ G ++ + + +M++ E + +T L+D
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++++A EL + V P F Y L+ LC G A ++ + + G P+ +
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI G + ++ + + +M ++G++ +++T+ L++ C VGR A + S
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ PD TY++L+ G + ++ + M ++ TY + G+ K
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 144/306 (47%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A + +++ RP SI + L++ K +D + +++M + P + T NI++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
C + + A +M + G P++V+F +L+ G+ + ++ + + +++ +G +
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ VT L+ LC + A EL G P Y LV LC G G A ++
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ K+ P+VI T LI+ ++ K +EA L M++ + PD T+ L+ LC
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G +A ++ L G P+ + Y L+ G+ + R ++G + EM +G + + TY
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 474 NSYMDG 479
+ G
Sbjct: 367 TVLIQG 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+F+ AL + RMV R P ++ F L+S + ++D+ + LF +M+ G P + + N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
++ + +M++LG E VT L++G C+ R+ A L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P Y L+ LC + A+E+ +++ G+ P+V+ L+ GL + + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ L+ M+K I P+ +TF L++ VG+ ++A L + + PD TY L++G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + M G P+ Y + + G +++
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCRE--FDKALGFYDRMV 217
++A K R N+ F++M ++ G +P + Y+ +++G+ + ++ M+
Sbjct: 195 IHALFKHGRTNEAKCIFDSM--VLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 252
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ P+ FNILI+ + R D A+ +F +M+ KG P+ V+F T+I + D
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF-GL 336
+ ++ M+++G S L+ G CN G ++KA EL+ + + + P YF +
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 372
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC EG +++D + + G P+V+ +L+EG + EA L++ M GI
Sbjct: 373 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 432
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ + L++ C GR DA + KG+ P + Y I++ G + R +
Sbjct: 433 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 492
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +EM++ G + TY + GL
Sbjct: 493 MFHEMIESGTTVSIHTYGVVLGGL 516
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 38/330 (11%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + I N +I K +E DKA +MV + PD+ T++++I G C++K D A +
Sbjct: 81 PKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERV 140
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M E G PN +++N+LI G+ ++E V + +M G + C + L
Sbjct: 141 LEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFK 200
Query: 308 EGRVLKA-CEL-----------VIDFS-------------------------RRGVLPKD 330
GR +A C +I +S +G+ P
Sbjct: 201 HGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNK 260
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L+ G A+ + +++ KG +P + T+I L R+ + +A
Sbjct: 261 HVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 320
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY-HILVSGYTREN 449
M+ G+ P + CL++ C+ G V A L K + P G+ Y +++ +E
Sbjct: 321 MVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEG 380
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
R EG+++++ M+ G P++ T+NS M+G
Sbjct: 381 RVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 410
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 3/295 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN+LI+ + + D L R++++ + PD +++ LI GF ++ + D A L
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM E+G P ++ N++I+ ++ D+ ++ +M++ G T +++DGLC
Sbjct: 71 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ KA ++ G P Y L+ G ++ V ++ G +P+V
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL--L 425
C + I L + + EA + + M+ +G PD ++++ +L + AD + L
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
TKG+ P+ ++IL++ Y R + + +M ++G IPD T+ + + L
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 305
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +++ + R++D L F M I PS ++Y LI G E KA M
Sbjct: 298 FATVISSLCRIGRLDDALHKFNHMVD-IGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 356
Query: 217 V-RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ +D P V F+ +I+ C+ + + M + G PNVV+FN+L+ G+
Sbjct: 357 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 416
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M +G E + LVDG C GR+ A + D +GV P Y
Sbjct: 417 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 476
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ L A ++ E+ + G S+ ++ GL R EA+ L+EK+
Sbjct: 477 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 536
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +TFN ++ + VGR +A L ST GL P+ TY ++++ +E +E +
Sbjct: 537 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD 596
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
NL + G D N + L N + + +
Sbjct: 597 NLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 631
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
LI GFVK E DKA + M+ V P ++ N +I C+ K+ D A + ++M + G
Sbjct: 54 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
P++ +++ +I G + D+ + +M+E G +S+T L+ G G ++
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ S GV+P + + L G A + D + KG P +I+ +T++ G
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 233
Query: 376 RRLRKG--VEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
+ + ML +GI P+ FN L+ G A + KG+ P
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 293
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
D +T+ ++S R R + + N M+D G P A Y + G N + V+
Sbjct: 294 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVK 348
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 1/303 (0%)
Query: 151 PEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKAL 210
P + F +N K R+ +G + M + RP+V +N L+ G+ ++A
Sbjct: 363 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQ-TGQRPNVVTFNSLMEGYCLVGNMEEAF 421
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
D M ++P+ + L+ G+C+N + D AL +FR+M KG P V ++ ++ G
Sbjct: 422 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 481
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
F R+ M +EMIE G S T +++ GLC +A L+ V
Sbjct: 482 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 541
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ ++ + G A E+ D + G +P++ + +I L + EA L
Sbjct: 542 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 601
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
+ K G DS N ++ L + A + L + T +L S ++RE +
Sbjct: 602 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 661
Query: 451 RKE 453
+E
Sbjct: 662 YRE 664
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 159/387 (41%), Gaps = 75/387 (19%)
Query: 180 MRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR 237
++K++D P + Y+++I+G K + DKA ++MV +P+ +T+N LI G+
Sbjct: 106 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 165
Query: 238 NKKFDLALGLFREMREKG-------CN----------------------------PNVVS 262
+ ++ ++ +F++M G CN P+++S
Sbjct: 166 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 225
Query: 263 FNTLIRGFFGERK-------------------------------------FDEGVNMAYE 285
++T++ G+ D+ + + +
Sbjct: 226 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 285
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
M G +VT ++ LC GR+ A GV P + Y L++ C G
Sbjct: 286 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 345
Query: 346 AGIALEVVDELWKKG-NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
A E++ E+ K P V +++I L + + E +M+ M++ G P+ VTFN
Sbjct: 346 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFN 405
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+E C VG +A L ++ G++P+ Y LV GY + R + + +ML +
Sbjct: 406 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 465
Query: 465 GFIPDLATYNSYMDGLSNARKSVRQTR 491
G P Y+ + GL AR++ +
Sbjct: 466 GVKPTSVLYSIILHGLFQARRTTAAKK 492
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+ L +V L K G P + +LI G + + +A L +M+++G+LP + N ++
Sbjct: 32 LGLAIVGRLLKNGLGPDDFS-YSLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSII 90
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
++LC + A+ + G+ PD TY +++ G + + E ++ +M++ G
Sbjct: 91 KELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTR 150
Query: 468 PDLATYNSYMDGLS 481
P+ TYNS + G S
Sbjct: 151 PNSITYNSLIHGYS 164
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 173/384 (45%), Gaps = 13/384 (3%)
Query: 101 TIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMER----- 155
T +FRH ++ ++ L + E +++ + + S +F+ R
Sbjct: 5 TNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRS 64
Query: 156 ---IFHFAVNAFVKANRMNDGLLAFEAMR--KLIDGRPSVSIYNVLINGFVKCREFDKAL 210
+F + A++++ + D A E R K R ++ +K + F
Sbjct: 65 DIYVFSGLITAYLESGFLRD---AIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVW 121
Query: 211 GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
GFY+ + + FNIL+ FC+ + LA +F + + G P+VVSFNTL+ G+
Sbjct: 122 GFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+EG + M G + T +L++GLC E ++ A EL + G++P
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNG 241
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
+ L++ C G +A+E+ ++ + P +I TLI GL + +A L+++
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M +G+ PD +T+ L++ C G A R + + + D + Y L+SG +E R
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGR 361
Query: 451 RKEGENLVNEMLDEGFIPDLATYN 474
+ E ++ EML G ++ TY
Sbjct: 362 SVDAEKMLREMLSVGLKLEIGTYT 385
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 1/281 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +++F K + F+A+ K RPSV +N L+NG++K + ++ + M
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKW-GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM 197
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+PDV T+++LI+G C+ K D A LF EM + G PN V+F TLI G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D + + +M+ +T L+ GLC +G + +A +L+ + S +G+ P Y L
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ C EG+ A E + K+ +A T LI GL + + V+A ++ +ML G+
Sbjct: 318 IDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ T+ ++ + C G +L G P +T
Sbjct: 378 KLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E +E G S IL+ C EG + A + ++ G+ P + L+ G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ + + + G P V + LI GL + K +A+ L ++ML G++P+ VTF
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C GR A + ++ L PD +TY+ L+ G ++ K+ ++L++EM +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 465 GFIPDLATYNSYMDG 479
G PD TY + +DG
Sbjct: 306 GLKPDKITYTTLIDG 320
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 312 LKACELVIDFSRRGV---LPKDFDYFG-LVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
LK +LV F + P +F L+ C EG +A V D + K G PSV++
Sbjct: 114 LKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVS 173
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL+ G +L E L M G+ PD T++ L+ LC + DA+ L
Sbjct: 174 FNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL P+G+T+ L+ G+ + R + +ML + PDL TYN+ + GL
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,146,673,900
Number of Sequences: 23463169
Number of extensions: 368316582
Number of successful extensions: 2173902
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6043
Number of HSP's successfully gapped in prelim test: 4626
Number of HSP's that attempted gapping in prelim test: 2011707
Number of HSP's gapped (non-prelim): 73979
length of query: 491
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 344
effective length of database: 8,910,109,524
effective search space: 3065077676256
effective search space used: 3065077676256
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)