BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011201
(491 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJN2|PP187_ARATH Pentatricopeptide repeat-containing protein At2g36240
OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1
Length = 497
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/477 (58%), Positives = 365/477 (76%), Gaps = 9/477 (1%)
Query: 17 SPPPPPAPSIPLPSRPETPPVTLP-SVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLL 75
+PP P IP P P+ P +++P ++TL+P+ H++ + FL+ +L P + +TP +LL
Sbjct: 23 TPPLPEIYRIPNPP-PKLPEISIPPTLTLSPSPKHSNFVNFLENNL--PHHQTLTPQTLL 79
Query: 76 HFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFI 135
FL+SK+ +HP + HYDF +F WA+T+D+FRHDH +FL++ RSLA+++RF +L+ +L+F+
Sbjct: 80 GFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFV 139
Query: 136 SANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV 195
+ANPCPCS+ GIFSCPE+E IF A++A+ +A +M+ LLAF+ M++LIDG+P+V +YN
Sbjct: 140 AANPCPCSS-GIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNT 198
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
++NG+VK + DKAL FY RM ++R KPDV TFNILI+G+CR+ KFDLAL LFREM+EKG
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
C PNVVSFNTLIRGF K +EGV MAYEMIELGC FS TCEILVDGLC EGRV AC
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDAC 318
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
LV+D + VLP +FDY LVEKLCGE A A+E+++ELWKKG P IACTTL+EGL
Sbjct: 319 GLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGL 378
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
R+ + +ASG MEKM+ GILPDSVTFN LL DLC + DA+RLRLLAS+KG +PD
Sbjct: 379 RKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDE 438
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN----ARKSVR 488
TYH+LVSG+T+E RRKEGE LVNEMLD+ +PD+ TYN MDGLS +RK VR
Sbjct: 439 TTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVR 495
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 173/329 (52%), Gaps = 4/329 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ + KA +N+ L + M P V YN ++ + +A+ DRM
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSV----SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ PDV+T+ ILI CR+ A+ L EMR++GC P+VV++N L+ G E +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
DE + +M GC+ + +T I++ +C+ GR + A +L+ D R+G P + L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC +G G A+++++++ + G P+ ++ L+ G + +K A +E+M+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N +L LC G+ DA + S+KG P +TY+ ++ G + + +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L++EM + PD TY+S + GLS K
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPC-------------PCSNDGIF-- 148
S D T+ I+RSL S + + VL+ + C C + G+
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 149 ----------SCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLIN 198
C ++ VN K R+++ + M +P+V +N+++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILR 317
Query: 199 GFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
+ A M+R P VVTFNILI+ CR A+ + +M + GC P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N +S+N L+ GF E+K D + M+ GC VT ++ LC +G+V A E++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
S +G P Y +++ L G G A++++DE+ K P I ++L+ GL R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K EA + + GI P++VTFN ++ LC +T A + +G P+ +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFI 467
IL+ G E KE L+NE+ ++G +
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 4/316 (1%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILI 232
A E + +++ D P V Y +LI + A+ D M RDR PDVVT+N+L+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLV 281
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C+ + D A+ +M GC PNV++ N ++R ++ + + +M+ G
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
S VT IL++ LC +G + +A +++ + G P Y L+ C E A+E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + +G P ++ T++ L + K +A ++ ++ +G P +T+N +++ L
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G+T A +L K L PD +TY LV G +RE + E +E G P+ T
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 473 YNSYMDGLSNARKSVR 488
+NS M GL +R++ R
Sbjct: 522 FNSIMLGLCKSRQTDR 537
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 8/360 (2%)
Query: 122 SYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMR 181
+ +F L S + + N S + F+ ++E H V+ + +G E M
Sbjct: 72 AQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHL--RQMVRTGELEEGFKFLENM- 128
Query: 182 KLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
+ G P + LI GF + + KA + + PDV+T+N++ISG+C+ +
Sbjct: 129 -VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
+ AL + M +P+VV++NT++R K + + + M++ C +T I
Sbjct: 188 INNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++ C + V A +L+ + RG P Y LV +C EG A++ ++++ G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P+VI ++ + + ++A L+ ML++G P VTFN L+ LC G A
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ G P+ ++Y+ L+ G+ +E + + M+ G PD+ TYN+ + L
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 200 FVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
V+ E ++ F + MV PD++ LI GFCR K A + + G P+
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V+++N +I G+ + + +++ M VT ++ LC+ G++ +A E++
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+R P Y L+E C + G A++++DE+ +G P V+ L+ G+ +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYH 439
+ EA + M G P+ +T N +L +C GR +DA++L KG P +T++
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 440 ILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
IL++ R+ +++ +M G P+ +YN + G +K R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 115/214 (53%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P+ YN L++GF K ++ D+A+ + +RMV PD+VT+N +++ C++ K + A+
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ ++ KGC+P ++++NT+I G K + + + EM + ++T LV GL
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+V +A + +F R G+ P + ++ LC A++ + + +G P+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+ T LIEGL EA L+ ++ +G++ S
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 149/299 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V YN+LI GF D AL +D+M P+VVT+N LI G+C+ +K D L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M KG PN++S+N +I G E + E + EM G VT L+ G C
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG +A + + R G+ P Y L+ +C GN A+E +D++ +G P+
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++G + EA ++ +M G P VT+N L+ C G+ DA +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
KGL PD ++Y ++SG+ R E + EM+++G PD TY+S + G R++
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 18/323 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+++ KA MN + + MR + G P+ Y L++GF + ++A M +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMR--VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
P VVT+N LI+G C K + A+ + +M+EKG +P+VVS++T++ GF DE
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM+E G + ++T L+ G C + R +AC+L + R G+ P +F Y L+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
C EG+ AL++ +E+ +KG LP V+ + LI GL + + EA L+ K+ E +P
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 400 SVTFNCLLED---------------LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
VT++ L+E+ C G +AD++ K PDG Y+I++ G
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 445 YTRENRRKEGENLVNEMLDEGFI 467
+ R ++ L EM+ GF+
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFL 672
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 1/323 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F A ++ L F+ M + P+V YN LI+G+ K R+ D M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++P+++++N++I+G CR + + EM +G + + V++NTLI+G+ E F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + M EM+ G S +T L+ +C G + +A E + RG+ P + Y L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
V+ +G A V+ E+ G PSV+ LI G K +A ++E M ++G+
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD V+++ +L C +A R++ KG+ PD +TY L+ G+ + R KE +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 457 LVNEMLDEGFIPDLATYNSYMDG 479
L EML G PD TY + ++
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINA 529
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 160/326 (49%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + RM + M + V+ YN LI G+ K F +AL + M
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT-YNTLIKGYCKEGNFHQALVMHAEM 336
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R + P V+T+ LI C+ + A+ +MR +G PN ++ TL+ GF +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E + EM + G S VT L++G C G++ A ++ D +G+ P Y +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C + AL V E+ +KG P I ++LI+G R+ EA L E+ML+ G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+ L+ C G A +L KG+ PD +TY +L++G +++R +E +
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L+ ++ E +P TY++ ++ SN
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEM 286
F++++ + R D AL + + G P V+S+N ++ +R N+ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E V P F Y L+ C GN
Sbjct: 197 LE-----------------------------------SQVSPNVFTYNILIRGFCFAGNI 221
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+AL + D++ KG LP+V+ TLI+G +LRK + L+ M +G+ P+ +++N +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC GR + + + +G D +TY+ L+ GY +E + + EML G
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 467 IPDLATYNSYMDGLSNA 483
P + TY S + + A
Sbjct: 342 TPSVITYTSLIHSMCKA 358
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 108/279 (38%), Gaps = 52/279 (18%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A R++++ +P Y+ LI GF + R +A Y+ M+R + PD T+ LI+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK------------FDEGV- 280
+C + AL L EM EKG P+VV+++ LI G + + ++E V
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 281 -NMAYEMIELGC---EFSSVTC---------------------------------EILVD 303
++ Y + C EF SV I++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 304 GLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLP 363
G C G + KA L + + G L LV+ L EG V+ + + L
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
L+E R ++ +M K+G LP+ ++
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 395 GILPDSVTFNCLLEDLCDVGRTVD-ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G +P +++N +L+ R + A+ + + P+ TY+IL+ G+
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L ++M +G +P++ TYN+ +DG RK
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 183/381 (48%), Gaps = 14/381 (3%)
Query: 104 SFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNA 163
F+H +T+ ++ L +F + VL + N +E ++ A+
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN---------VGNHMLEGVYVGAMKN 85
Query: 164 FVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VK 222
+ + ++ + + FE M D P+V YN +++ V FD+A Y RM RDR +
Sbjct: 86 YGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM-RDRGIT 143
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV +F I + FC+ + AL L M +GC NVV++ T++ GF+ E EG +
Sbjct: 144 PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVID-FSRRGVLPKDFDYFGLVEKLC 341
+M+ G T L+ LC +G V K CE ++D +RGVLP F Y ++ LC
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDV-KECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A+ +V L ++G P VI LI GL + K EA + KM+ EG+ PDS
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N L+ C G A+R+ A G PD TY L+ G E L NE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 462 LDEGFIPDLATYNSYMDGLSN 482
L +G P++ YN+ + GLSN
Sbjct: 383 LGKGIKPNVILYNTLIKGLSN 403
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 189/381 (49%), Gaps = 17/381 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI-FHFAVNAFVK 166
D +F ++S + R +LN +S+ C EM + + V F +
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC-----------EMNVVAYCTVVGGFYE 193
Query: 167 ANRMNDGLLAFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPD 224
N +G +E K++ S+ S +N L+ K + + D++++ V P+
Sbjct: 194 ENFKAEG---YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 225 VVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAY 284
+ T+N+ I G C+ + D A+ + + E+G P+V+++N LI G KF E
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
+M+ G E S T L+ G C G V A +V D G +P F Y L++ LC EG
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
AL + +E KG P+VI TLI+GL +EA+ L +M ++G++P+ TFN
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L+ LC +G DAD L + +KG PD T++IL+ GY+ + + + +++ MLD
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 465 GFIPDLATYNSYMDGLSNARK 485
G PD+ TYNS ++GL K
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSK 511
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN LI G K +F +A + +MV + ++PD T+N LI+G+C+ LA
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ + G P+ ++ +LI G E + + + + E + G + + + L+ GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
N+G +L+A +L + S +G++P+ + LV LC G A +V + KG P +
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI G K A +++ ML G+ PD T+N LL LC + D
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
KG P+ T++IL+ R + E L+ EM ++ PD T+ + +DG
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 143/300 (47%), Gaps = 11/300 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++ + +M + L + M L +G P V YN L+NG K +F+ + Y
Sbjct: 464 FNILIHGYSTQLKMENALEILDVM--LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV P++ TFNIL+ CR +K D ALGL EM+ K NP+ V+F TLI GF
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 276 FDEGVNMAYEMIE-LGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
D + +M E S+ T I++ + V A +L + R + P + Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
+V+ C GN + + + E+ + G +PS+ +I L + EA+G++ +M+++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 395 GILPDSVTFNCLLEDLCDVGRT-VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
G++P++V +CDV + V A +L L K Y +L G + RK+
Sbjct: 702 GLVPEAVN------TICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRKK 755
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 3/292 (1%)
Query: 197 INGFVKCREFD-KALGFYDRMVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
+ +KC++ KAL ++ M ++ K + T+ +I KF+ + +MRE
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 255 GCNPNVVSFNTLIRGFFGER-KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
N + +G + K E VN+ M CE + + ++ L + G +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A ++ + RG+ P + + ++ C AL +++ + +G +V+A T++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G E L KML G+ TFN LL LC G + ++L +G+ P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ TY++ + G + +V ++++G PD+ TYN+ + GL K
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F+ +N F K ++D F+ + K +P+V +N LING+ K D+ +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M + R +PDV T++ LI+ C+ K D A GLF EM ++G PN V F TLI G +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +M+ G + V LV+G C G ++ A +V RRG+ P Y
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G+ ALE+ E+ + G + + L+ G+ + + ++A + +ML+ G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD VT+ +++ C G +L + G P +TY++L++G + + K +
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 456 NLVNEMLDEGFIPDLATYNSYMDG 479
L++ ML+ G +PD TYN+ ++G
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEG 564
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 8/334 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N + K +++G M K RP V Y+ LIN K + D A G +D M
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEK-SRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ V F LI G RN + DL +++M KG P++V +NTL+ GF
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
N+ MI G +T L+DG C G V A E+ + + G+ + L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG--LMEKMLKE 394
V +C EG A + E+ + G P + T +++ +KG +G L+++M +
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF--CKKGDAQTGFKLLKEMQSD 514
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G +P VT+N LL LC +G+ +AD L G+ PD +TY+ L+ G+ R +
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR 574
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
E+ G + DLA+Y S ++ L A K R
Sbjct: 575 YIQKPEI---GIVADLASYKSIVNELDRASKDHR 605
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 10/426 (2%)
Query: 64 PTNNQITPSSLLHFLKSKLHHHPQF--THYDFHIFAWASTIDSFRHDHTTFLFIVRSLAS 121
P+ ++ PS +H + ++H+P F F + S+ FR T+ + R LA
Sbjct: 71 PSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAV 130
Query: 122 SYRFSELHSVLNFISANPCPCSNDGIF-SCPEMER--IFHFAVNA----FVKANRMNDGL 174
F+E S++ + + S +F S EM + F V+A + + D +
Sbjct: 131 HEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI 190
Query: 175 LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISG 234
F RK P N L++ +K GFY ++ +V FNIL++
Sbjct: 191 QCFRLSRKHRFDVPIRGCGN-LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNK 249
Query: 235 FCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFS 294
FC+ A +F E+ ++ P VVSFNTLI G+ DEG + ++M +
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 295 SVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD 354
T L++ LC E ++ A L + +RG++P D + L+ G + E
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 355 ELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVG 414
++ KG P ++ TL+ G + V A +++ M++ G+ PD +T+ L++ C G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 415 RTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
A +R G++ D + + LV G +E R + E + EML G PD TY
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 475 SYMDGL 480
MD
Sbjct: 490 MMMDAF 495
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A + +++ K + P V+FN L+ C VG + RL+ PD TY L+
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLS 481
+ +EN+ L +EM G IP+ + + + G S
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
C L++ + +L G ++L G + FN L+ C G DA ++
Sbjct: 207 GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + L P ++++ L++GY + EG L ++M PD+ TY++ ++ L K
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK 325
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 202/450 (44%), Gaps = 29/450 (6%)
Query: 37 VTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIF 96
+T PS T++ + H+ L LL +Q S+ L +F
Sbjct: 29 LTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALR------------------LF 70
Query: 97 AWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERI 156
AS +F + + I+ L S F ++ +L + ++ C
Sbjct: 71 NLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTS----------T 120
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + ++ + ++ L + M +P YN ++N V + +M
Sbjct: 121 FLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM 180
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+KPDV TFN+LI CR + A+ + +M G P+ +F T+++G+ E
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR-GVLPKDFDYFG 335
D + + +M+E GC +S+V+ ++V G C EGRV A + + S + G P + +
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
LV LC G+ A+E++D + ++G P V ++I GL +L + EA ++++M+
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P++VT+N L+ LC + +A L + ++KG+ PD T++ L+ G +
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM +G PD TYN +D L + K
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 159/336 (47%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
F C + V+ F K R+ D L + M P +N L+NG K
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
A+ D M+++ PDV T+N +ISG C+ + A+ + +M + C+PN V++NTLI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
E + +E +A + G T L+ GLC A EL + +G
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P +F Y L++ LC +G AL ++ ++ G SVI TLI+G + K EA +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
++M G+ +SVT+N L++ LC R DA +L +G PD TY+ L++ + R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
K+ ++V M G PD+ TY + + GL A
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 171/362 (47%), Gaps = 9/362 (2%)
Query: 128 LHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR 187
+ LNFI + DG F P+ + F+ VN KA + + + M L +G
Sbjct: 275 VEDALNFIQEMS---NQDGFF--PD-QYTFNTLVNGLCKAGHVKHAIEIMDVM--LQEGY 326
Query: 188 -PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
P V YN +I+G K E +A+ D+M+ P+ VT+N LIS C+ + + A
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L R + KG P+V +FN+LI+G R + + EM GCE T +L+D LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
++G++ +A ++ G Y L++ C A E+ DE+ G + +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+GL + R+ +A+ LM++M+ EG PD T+N LL C G A +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
++ G +PD +TY L+SG + R + L+ + +G YN + GL RK+
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 487 VR 488
Sbjct: 627 TE 628
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 149/318 (46%), Gaps = 3/318 (0%)
Query: 176 AFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A E + ++I D P+ YN LI+ K + ++A + + PDV TFN LI
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G C + +A+ LF EMR KGC P+ ++N LI + K DE +NM +M GC
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
S +T L+DG C + +A E+ + GV Y L++ LC A +++
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
D++ +G P +L+ R +A+ +++ M G PD VT+ L+ LC
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI-PDLAT 472
GR A +L KG++ Y+ ++ G R+ + E NL EML++ PD +
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 473 YNSYMDGLSNARKSVRQT 490
Y GL N +R+
Sbjct: 649 YRIVFRGLCNGGGPIREA 666
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ SL S + E ++L + + C S ++ ++ F KA
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS----------VITYNTLIDGFCKA 483
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N+ + F+ M R SV+ YN LI+G K R + A D+M+ + KPD T
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+N L++ FCR A + + M GC P++V++ TLI G + + + +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK-LC-GEGN 345
G + ++ GL + + +A L + + P D + +V + LC G G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
A++ + EL +KG +P + L EGL L
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 161/313 (51%), Gaps = 2/313 (0%)
Query: 175 LAFEAMRKLI--DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA + + +L+ + +P+V Y +LI + D+AL D M+ +KPD+ T+N +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
G C+ D A + R + KGC P+V+S+N L+R + K++EG + +M C+
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+ VT IL+ LC +G++ +A L+ +G+ P + Y L+ C EG +A+E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ + G LP ++ T++ L + K +A + K+ + G P+S ++N + L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G + A + L + G+DPD +TY+ ++S RE E L+ +M F P + T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 473 YNSYMDGLSNARK 485
YN + G A +
Sbjct: 511 YNIVLLGFCKAHR 523
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 8/340 (2%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREF 206
F +M +IFH + ++ + L E M RK + P V + LI GF R
Sbjct: 87 FRDTQMLKIFHRSC----RSGNYIESLHLLETMVRKGYN--PDVILCTKLIKGFFTLRNI 140
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
KA+ + ++ +PDV +N LI+GFC+ + D A + MR K +P+ V++N +
Sbjct: 141 PKAVRVME-ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I K D + + +++ C+ + +T IL++ EG V +A +L+ + RG+
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
P F Y ++ +C EG A E+V L KG P VI+ L+ L K E
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
LM KM E P+ VT++ L+ LC G+ +A L L KGL PD +Y L++ +
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
RE R + M+ +G +PD+ YN+ + L K+
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 178/382 (46%), Gaps = 17/382 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
F D T+ ++ SL S + VLN + ++ C + + + +
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT------------VITYTI--L 234
Query: 165 VKANRMNDGL-LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRV 221
++A + G+ A + M +++ +P + YN +I G K D+A +
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 222 KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVN 281
+PDV+++NIL+ K++ L +M + C+PNVV+++ LI + K +E +N
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 282 MAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLC 341
+ M E G + + + L+ C EGR+ A E + G LP +Y ++ LC
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
G A ALE+ +L + G P+ + T+ L + A ++ +M+ GI PD +
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
T+N ++ LC G +A L + + P +TY+I++ G+ + +R ++ N++ M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 462 LDEGFIPDLATYNSYMDGLSNA 483
+ G P+ TY ++G+ A
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFA 556
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 169/329 (51%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A K N+ + + E M+ L ++ Y++LIN F + + AL +M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +PD+VT N L++GFC + A+ L +M E G P+ +FNTLI G F +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + M+ GC+ VT I+V+GLC G + A L+ + + P Y +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC N AL + E+ KG P+V+ +LI L + +AS L+ M++ I
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VTF+ L++ G+ V+A++L + +DPD TY L++G+ +R E ++
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + P++ TYN+ + G A++
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR++D + M ++ +P +N LI+G + +A+ DRMV
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ I+++G C+ DLAL L ++M + P VV +NT+I + ++ +
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LCN GR A L+ D R + P + L++
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY L+ G+ + + + +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G +PD+ TY+ +DGL N K
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGK 481
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 165 VKANRMNDGLL--AFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDR 220
+ NR+ND L A ++ RP SI ++ L++ K +FD + ++M
Sbjct: 52 ISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+ ++ T++ILI+ FCR + LAL + +M + G P++V+ N+L+ GF + + V
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M+E+G + S T L+ GL R +A LV +G P Y +V L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C G+ +AL ++ ++ + P V+ T+I+ L + +A L +M +GI P+
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ LC+ GR DA RL + ++P+ +T+ L+ + +E + E E L +E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ PD+ TY+S ++G
Sbjct: 352 MIKRSIDPDIFTYSSLINGF 371
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 158/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++A +ND L F M K I RP+V YN LI + A
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ A V ++ G LP ++ + L++GL K A + E + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ +TY ++SG+ R+ ++E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM +EG +PD TYN+
Sbjct: 556 DALFREMKEEGPLPDSGTYNT 576
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 185/387 (47%), Gaps = 17/387 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
++ D TF ++ L R SE ++++ + C P++ + VN
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ---------PDLV-TYGIVVNGL 231
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K ++ LA ++K+ G+ P V IYN +I+ + + AL + M ++
Sbjct: 232 CKRGDID---LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+VVT+N LI C ++ A L +M E+ NPNVV+F+ LI F E K E +
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI+ + T L++G C R+ +A + + P Y L++ C
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ E+ ++G + + + TTLI G + R+ A + ++M+ +G+LPD +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
++ LL+ LC+ G+ A + ++PD TY+I++ G + + ++G +L +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQ 489
+G P++ TY + M G RK +++
Sbjct: 529 LKGVKPNVVTYTTMMSGF--CRKGLKE 553
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 144/275 (52%), Gaps = 4/275 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++AFVK ++ + ++ M ++ ID P + Y+ LINGF D+A ++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+VVT+N LI GFC+ K+ D + LFREM ++G N V++ TLI GFF R+
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ G +T IL+DGLCN G+V A + R + P + Y
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E +C G ++ L KG P+V+ TT++ G R EA L +M +EG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 396 ILPDSVTFNCLLE-DLCDVGRTVDADRLRLLASTK 429
LPDS T+N L+ L D + A+ +R + S +
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 152/302 (50%), Gaps = 10/302 (3%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL-- 305
F M K C PNVV++NTLI+GF ++ DEG+ + EM + G ++VT L+ G
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 306 ---CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
C+ +++ ++V D GVLP Y L++ LC G AL V + L +
Sbjct: 444 ARECDNAQIVFK-QMVSD----GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P + +IEG+ + K + L + +G+ P+ VT+ ++ C G +AD L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+G PD TY+ L+ + R+ + L+ EM F+ D +T + L +
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
Query: 483 AR 484
R
Sbjct: 619 GR 620
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL P + N L+NGF A+ +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD TFN LI G R+ + A+ L M KGC P++V++ ++ G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++D LCN V A L + +G+ P Y L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L+ G+ + R EG
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L EM G + + TY + + G AR+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARE 446
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 190/389 (48%), Gaps = 14/389 (3%)
Query: 95 IFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEME 154
+F A + SF+ +T ++ S A+S F + +L+ I N I +E
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-----NRVI-----IE 112
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R F A+ KA+ + + F M + SV +N ++N + + + L FYD
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYD 172
Query: 215 RMVRDR----VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
+V + P+ ++FN++I C+ + D A+ +FR M E+ C P+ ++ TL+ G
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
E + DE V + EM GC S V +L+DGLC +G + + +LV + +G +P +
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC +G A+ +++ + +P+ + TLI GL + R+ +A L+
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M + G + ++ L+ L G+ +A L + KG P+ + Y +LV G RE +
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDG 479
E + ++N M+ G +P+ TY+S M G
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKG 441
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 185/394 (46%), Gaps = 28/394 (7%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-------DGIFSCPEMERIFHFA 160
D T+ ++ L R E +L+ + + C S DG+ ++ R+
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV 280
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
N F+K P+ YN LI+G + DKA+ +RMV +
Sbjct: 281 DNMFLKG------------------CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ VT+ LI+G + ++ A+ L M E+G + N ++ LI G F E K +E +
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M E GC+ + V +LVDGLC EG+ +A E++ G LP + Y L++
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
G A++V E+ K G + + LI+GL + + EA + KML GI PD+
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 401 VTFNCLLEDLCDVGRTVDADRL---RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
V ++ +++ LC +G A +L L PD +TY+IL+ G + +L
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+N MLD G PD+ T N++++ LS S + R
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ + A K ++ + F M RK + P Y L++G K D+A+ D
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCL---PDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + P V +N+LI G C+ L M KGC PN V++NTLI G +
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ V++ M+ C + VT L++GL + R A L+ RG Y
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ L EG A A+ + ++ +KG P+++ + L++GL R K EA ++ +M+
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G LP++ T++ L++ G +A ++ G + Y +L+ G R KE
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ML G PD Y+S + GL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T + +I + + FD L +R + SF + R + D+ V++ + M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 287 I-ELGCEFSSVTCEILVDGLCNEG---RVLKACELVIDFSRR-GVLPKDFDYFGLVEKLC 341
+ E C+ S + +++ + NEG R L+ + V++ + + P + +++ LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A+EV + ++ LP TL++GL + + EA L+++M EG P V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEM 461
+N L++ LC G +L KG P+ +TY+ L+ G + + + +L+ M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 462 LDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ IP+ TY + ++GL R++ R
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 21/212 (9%)
Query: 150 CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKA 209
C + + ++ R+ + ++ + M I +P Y+ +I G D A
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT-IGIKPDTVAYSSIIKGLCGIGSMDAA 521
Query: 210 LGFYDRMV---RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
L Y M+ + +PDVVT+NIL+ G C K A+ L M ++GC+P+V++ NT
Sbjct: 522 LKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTF 581
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
+ E N C+ E LV L RV AC +V + +
Sbjct: 582 L------NTLSEKSN--------SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYL 627
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
PK + +V ++C A +D+ W+
Sbjct: 628 APKTSTWAMIVREICKPKKINAA---IDKCWR 656
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 159/302 (52%), Gaps = 2/302 (0%)
Query: 175 LAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E + + + +P+V Y +L++GF K + D+A + M D +KP+ V FN LI
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
S FC+ + A+ +FREM KGC P+V +FN+LI G + + + +MI G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
++VT L++ G + +A +LV + +G + Y L++ LC G A +
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+++ + G+ PS I+C LI GL R EA ++M+ G PD VTFN L+ LC
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
GR D + +G+ PD +T++ L+S + + L++E +++GF+P+ T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 473 YN 474
++
Sbjct: 707 WS 708
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 152/325 (46%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ ++ FV R++D M P V YN LI G+ K AL
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M KP+V ++ IL+ GFC+ K D A + EM G PN V FN LI F E +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E V + EM GC+ T L+ GLC + A L+ D GV+ Y
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ G A ++V+E+ +G+ I +LI+GL R + +A L EKML++G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
P +++ N L+ LC G +A + +G PD +T++ L++G R R ++G
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ EG PD T+N+ M L
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLAL 245
+P + I+N LI+GFV D A MV + PDV T+N LI G+ + LAL
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 246 GLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGL 305
+ +MR KGC PNV S+ L+ GF K DE N+ EM G + ++V L+
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 306 CNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSV 365
C E R+ +A E+ + R+G P + + L+ LC AL ++ ++ +G + +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 366 IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLL 425
+ TLI R + EA L+ +M+ +G D +T+N L++ LC G A L
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
G P ++ +IL++G R +E EM+ G PD+ T+NS ++GL A
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 186/437 (42%), Gaps = 21/437 (4%)
Query: 40 PSVTLTPTAHHTH-LLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAW 98
P + T +A+ LL+ L + ++ITP L KL P +F+W
Sbjct: 46 PEIGGTDSANEWEKLLKPFDLDSLRNSFHKITPFQLY-----KLLELPLNVSTSMELFSW 100
Query: 99 ASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFH 158
+ + +RH + ++ L ++ F + +L ++GI E +F
Sbjct: 101 TGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLL-------IQMKDEGIVF---KESLFI 150
Query: 159 FAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+ + KA MR + P+ YNV++ V A + M+
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++ P + TF +++ FC + D AL L R+M + GC PN V + TLI + +E
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ + EM +GC + T ++ GLC R+ +A ++V RG P D Y L+
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE-GIL 397
LC G A ++ + K P ++ TLI G + +A ++ M+ GI+
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD T+N L+ G A + KG P+ +Y ILV G+ + + E N+
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 458 VNEMLDEGFIPDLATYN 474
+NEM +G P+ +N
Sbjct: 447 LNEMSADGLKPNTVGFN 463
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 331 FDYFGLVEKLCGEGNA-GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
F + +V ++ GN +A V ++ + P++ +++ + + A L+
Sbjct: 182 FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M K G +P+SV + L+ L R +A +L G PD T++ ++ G + +
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
R E +VN ML GF PD TY M+GL
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N ++ + + + F+ L P + +N LING + + L + ++ +
Sbjct: 606 INGLCRSGMVEEAV-EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD VTFN L+S C+ A L E E G PN +++ L++ + D
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
+N + + R+++ + + M + G +P+ +N LI+G + +A+ DRMV
Sbjct: 158 LNGYCHSKRISEAVALVDQM--FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+PD+VT+ ++++G C+ DLA L +M + P V+ +NT+I G + D+
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+N+ EM G + VT L+ LCN GR A L+ D R + P F + L++
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
EG A ++ DE+ K+ PS++ ++LI G + EA + E M+ + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+N L++ C R + + S +GL + +TY+IL+ G + + +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
EM+ +G P++ TYN+ +DGL
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGL 476
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGI--RPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ PDV TF+ LI F + K A L+ EM ++ +P++V++++LI GF
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE M M+ C VT L+ G C RV + E+ + S+RG++ Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A E+ E+ G P+++ TL++GL + K +A + E + +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ YN+
Sbjct: 556 DALFKEMKEDGTLPNSGCYNT 576
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 169/330 (51%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K N+ + + E M+ L G P + Y++LIN F + + AL +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNL--GIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P++VT + L++G+C +K+ A+ L +M G PN V+FNTLI G F K
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
E + + M+ GC+ VT ++V+GLC G A L+ + + P Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC + AL + E+ KG P+V+ ++LI L + +AS L+ M++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
I PD TF+ L++ G+ V+A++L + +DP +TY L++G+ +R E +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ + PD+ TYN+ + G ++
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V ++ LI+ FVK + +A YD MV+ + P +VT++ LI+GFC + + D A +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ +EG+ + EM + G ++VT IL+ GL
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A E+ + GV P Y L++ LC G A+ V + L + P++
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ PD V +N ++ C G +AD L
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ Y+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 620
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 163/314 (51%), Gaps = 5/314 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++D + F M K RP SI ++ L++ K +FD + ++M + +
Sbjct: 61 KLDDAVALFGEMVK---SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T++ILI+ FCR + LAL + +M + G PN+V+ ++L+ G+ ++ E V + +M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
G + ++VT L+ GL + +A L+ +G P Y +V LC G+
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+A +++++ + P V+ T+I+GL + + +A L ++M +GI P+ VT++ L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ GR DA RL + ++PD T+ L+ + +E + E E L +EM+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 467 IPDLATYNSYMDGL 480
P + TY+S ++G
Sbjct: 358 DPSIVTYSSLINGF 371
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 142/311 (45%)
Query: 181 RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKK 240
R+ G+ S L + + D A+ + MV+ R P ++ F+ L+S + K
Sbjct: 37 RRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK 96
Query: 241 FDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEI 300
FD+ + L +M+ G N +++ LI F + + + +M++LG E + VT
Sbjct: 97 FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
L++G C+ R+ +A LV G P + L+ L A A+ ++D + KG
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
P ++ ++ GL + A L+ KM + + P + +N +++ LC DA
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L TKG+ P+ +TY L+S R + L+++M++ PD+ T+++ +D
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 481 SNARKSVRQTR 491
K V +
Sbjct: 337 VKEGKLVEAEK 347
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F + L +P V YN +I+GF + ++A + M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ +N LI R+ + + L +EMR G
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 154/298 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + +N LI G + +A+ DRMV + +PDVVT+N +++G CR+ LAL L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R+M E+ +V +++T+I + D +++ EM G + S VT LV GLC
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G+ L+ D R ++P + L++ EG A E+ E+ +G P++I
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TL++G + EA+ +++ M++ PD VTF L++ C V R D ++ S
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+GL + +TY ILV G+ + + K E L EM+ G +PD+ TY +DGL + K
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 162/312 (51%), Gaps = 2/312 (0%)
Query: 176 AFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A +++I RP S+ ++ + + ++F+ L F ++ + + ++ T NI+I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
FCR K A + ++ + G P+ +FNTLI+G F E K E V + M+E GC+
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
VT +V+G+C G A +L+ R V F Y +++ LC +G A+ +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG SV+ +L+ GL + K + + L++ M+ I+P+ +TFN LL+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G+ +A+ L T+G+ P+ +TY+ L+ GY +NR E N+++ M+ PD+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 474 NSYMDGLSNARK 485
S + G ++
Sbjct: 372 TSLIKGYCMVKR 383
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 5/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ V KA + NDG L + M R+++ P+V +NVL++ FVK + +A Y
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + P+++T+N L+ G+C + A + M C+P++V+F +LI+G+ +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + + + G ++VT ILV G C G++ A EL + GVLP Y
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G ALE+ ++L K ++ TT+IEG+ + K +A L + +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P+ +T+ ++ LC G +A+ L G P+ TY+ L+ + R+
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
L+ EM GF D ++ +D L
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDML 588
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ SV YN L+ G K +++ MV + P+V+TFN+L+ F + K A
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L++EM +G +PN++++NTL+ G+ + + E NM M+ C VT L+ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
RV ++ + S+RG++ Y LV+ C G +A E+ E+ G LP V+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
L++GL K +A + E + K + V + ++E +C G+ DA L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
KG+ P+ MTY +++SG ++ E L+ +M ++G P+ TYN+ +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 152/303 (50%), Gaps = 8/303 (2%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P V YN ++NG + + AL +M VK DV T++ +I CR+ D A+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG +VV++N+L+RG K+++G + +M+ + +T +L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++ +A EL + RG+ P Y L++ C + A ++D + + P ++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI+G +++ + + + K G++ ++VT++ L++ C G+ A+ L
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEG----ENLVNEMLDEGFIPDLATYNSYMDGLSN 482
+ G+ PD MTY IL+ G + ++ E+L +D G + Y + ++G+
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCK 485
Query: 483 ARK 485
K
Sbjct: 486 GGK 488
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 35/272 (12%)
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
D A+ + M+R R P +V F+ S R K+F+L L +++ G N+ + N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGV 326
I F K ++ ++++LG E + T L+ GL EG+V +A L
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL--------- 180
Query: 327 LPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG 386
VD + + G P V+ +++ G+ R A
Sbjct: 181 --------------------------VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 387 LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYT 446
L+ KM + + D T++ +++ LC G A L TKG+ +TY+ LV G
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 447 RENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
+ + +G L+ +M+ +P++ T+N +D
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR---EFDKALGFY 213
F+ +NA K +MN E M K+ P+V YN LI+G+ K + KA
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
MV + V P++ TFNILI GF ++ ++ +F+EM ++ PNV+S+N+LI G
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
K E ++M +M+ G + + +T L++G C + +A ++ +G +P Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ C G + +E+ ++G +P V LI GL R A L +++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G LPD VTF+ L+E C G + A L S GL P +TY+I++ GY +E K
Sbjct: 465 KG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 454 GENLVNEMLDEGFIP-DLATYNSYMDGLSNARK 485
N+ +M E + ++A+YN + G S K
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 181/410 (44%), Gaps = 47/410 (11%)
Query: 115 IVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEM-------ERIFHFAVNAFVKA 167
++ SLA++ R+S++ S L+ N IF M I V A+
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+R G AF+ ++S ++I + R D Y M+R +++P+V T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY-VYKEMIRRKIQPNVFT 225
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF---GERKFDEGVNMAY 284
FN++I+ C+ K + A + +M+ GC+PNVVS+NTLI G+ G K + +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 285 EMIELGCEFSSVTCEILVD-----------------------------------GLCNEG 309
EM+E + T IL+D GLCN G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
++ +A + GV P Y L+ C AL++ + +G +P+
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI+ +L K + L E+M +EGI+PD T+NCL+ LC G A +L ++K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 430 GLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
GL PD +T+HIL+ GY R+ ++ L+ EM G P TYN M G
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 36/308 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ F K + + + F+ M D +P+V YN LING + +A+ D+M
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V V+P+++T+N LI+GFC+N AL +F ++ +G P +N LI + K
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 277 DEGVNMAYEMIELG---------CEFSS-------------------------VTCEILV 302
D+G + EM G C + VT IL+
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILM 477
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+G C +G KA L+ + S+ G+ P+ Y +++ C EGN A + ++ K+ L
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 363 P-SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
+V + L++G + K +A+ L+ +ML++G++P+ +T+ + E++ D G D +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 422 LRLLASTK 429
STK
Sbjct: 598 HLFNVSTK 605
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 171/335 (51%), Gaps = 7/335 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N F + +R+ D L F+ M + +P+V IYN +I+G K ++ D AL +RM
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+D + PDVVT+N LISG C + ++ A + M ++ P+V +FN LI E +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E EMI + VT +L+ GLC R+ +A E+ +G P Y L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C +++ E+ ++G + + + T LI+G R K A + +M+ G+
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK--GLDPDGMTYHILVSGYTRENRRKEG 454
P+ +T+N LL LCD G+ A L +LA + G+D D +TY+I++ G + +
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKA--LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQ 489
++ + +G +PD+ TY + M GL +K +R+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGL--YKKGLRR 483
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 164/330 (49%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRP-SVSIYNVLINGFVKCREFDKALGFYDR 215
F ++A K + + + +E M+ L G P ++ N+L+N F +C + AL F +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQML--GIPHNLCTCNILLNCFCRCSQLSLALSFLGK 141
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ +P +VTF L++GFCR + AL +F +M G PNVV +NT+I G ++
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D +++ M + G VT L+ GLC+ GR A +V ++R + P F +
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ EG A E +E+ ++ P ++ + LI GL + EA + M+ +G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD VT++ L+ C + +L S +G+ + +TY IL+ GY R + E
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ M+ G P++ TYN + GL + K
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 153/299 (51%), Gaps = 2/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS++ ++ L++ K +++D + +++M + ++ T NIL++ FCR + LAL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 248 FREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+M + G P++V+F +L+ GF G+R +D + M +M+ +G + + V ++DGLC
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+V A +L+ + G+ P Y L+ LC G A +V + K+ P V
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
LI+ + + EA E+M++ + PD VT++ L+ LC R +A+ +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG PD +TY IL++GY + + + G L EM G + + TY + G A K
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 155/323 (47%), Gaps = 1/323 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + ++++ L M KL PS+ + L+NGF + AL +D+MV
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
KP+VV +N +I G C++K+ D AL L M + G P+VV++N+LI G ++ +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M M + T L+D EGRV +A E + RR + P Y L+ L
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C A E+ + KG P V+ + LI G + +K L +M + G++ ++
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+ L++ C G+ A+ + G+ P+ +TY++L+ G + ++ ++ +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 461 MLDEGFIPDLATYNSYMDGLSNA 483
M G D+ TYN + G+ A
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKA 444
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%)
Query: 191 SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFRE 250
S Y ++ ++ + D +L + MV+ R P + F+ L+S + KK+D+ + L+ +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
M+ G N+ + N L+ F + ++ +MI+LG E S VT L++G C R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
V A + G P Y +++ LC AL++++ + K G P V+ +
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI GL + +A+ ++ M K I PD TFN L++ GR +A+ +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
LDPD +TY +L+ G +R E E + M+ +G PD+ TY+ ++G ++K
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Query: 351 EVVDELWKKGNLPSV----IACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+VV LW++ + + C L+ R + A + KM+K G P VTF L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
L C R DA + G P+ + Y+ ++ G + + +L+N M +G
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 467 IPDLATYNSYMDGLSNARKSVRQTR 491
PD+ TYNS + GL ++ + TR
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATR 242
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 33/361 (9%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGF---------------V 201
F+ +N K ++ F + ++ +P++ YN L+ GF +
Sbjct: 228 FNIMINVLCKEGKLKKAK-GFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 202 KCREFDKALGFYD-----------------RMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
K + F + Y+ M + PD V++NILI G N ++A
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
EM ++G P ++NTLI G F E K + + E+ E G SVT IL++G
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
C G KA L + G+ P F Y L+ LC + A E+ +++ KG P
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ TL++G + A L+++M I PD VT+NCL+ LC G+ +A L
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
+G+ PD ++Y+ L+SGY+++ K + +EML GF P L TYN+ + GLS +
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 485 K 485
+
Sbjct: 587 E 587
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 213/516 (41%), Gaps = 68/516 (13%)
Query: 17 SPPPPPAPSIPLPSRPET--PPVTLPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSL 74
SP S+ S PE+ PP+T + + + H++ + L TP+ + ++L
Sbjct: 23 SPAAARLSSLAQTSTPESVLPPITSEILLESIRSSQWHIVEHVADKL-TPS---LVSTTL 78
Query: 75 LHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTT---FLFIVRSLASSYRFSELHSV 131
L +K+ P F + + ID +R D T + ++ L+S ++L +
Sbjct: 79 LSLVKT-----PNLA------FNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQL--L 125
Query: 132 LNFISANPCPCSN---DGIFSCPEMER----IFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
+++ N + + + +E +F V + +++ + F M++
Sbjct: 126 KEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK- 184
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
P N ++ + + A FY M R +K +V TFNI+I+ C+ K A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
G M G P +V++NTL++GF + + + EM G + T ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+CNEGR A E++ + G++P Y L+ G+ +A DE+ K+G +P+
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
TLI GL K A L+ ++ ++GI+ DSVT+N L+ C G A L
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLA------------- 471
T G+ P TY L+ R+N+ +E + L +++ +G PDL
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 472 ----------------------TYNSYMDGLSNARK 485
TYN M GL K
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YN+LING+ + + KA +D M+ D ++P T+ LI CR K A LF ++
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
KG P++V NTL+ G D ++ EM + VT L+ GLC EG+
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFE 519
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A EL+ + RRG+ P Y L+ +G+ A V DE+ G P+++ L+
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
+GL + ++G A L+ +M EGI+P+ +F ++E + ++
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
N +I FV+ D A+ Y +M R+ ++ +FNILI FC K +L F ++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 254 KGCNPNVVSFNTLIRGF------------FG---ERKFDEGVNMAYEMIELGCEFSSVTC 298
G P+VV+FNTL+ G FG E F E V + +M+E+G +T
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
L++GLC EGRVL+A LV +G+ Y +V +C G+ AL ++ ++ +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
P V+ + +I+ L + +A L +ML++GI P+ T+NC+++ C GR D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A RL + ++PD +T++ L+S +E + E E L +EML PD TYNS +
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 479 GL 480
G
Sbjct: 410 GF 411
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 156 IFHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++ K +D F E + K I P+V YN +I+GF + A
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGI--APNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PDV+TFN LIS + K A L EM + P+ V++N++I GF
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+FD+ A M +L VT ++D C RV + +L+ + SRRG++ Y
Sbjct: 416 RFDD----AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C N A ++ E+ G P I C L+ G K EA L E +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D+V +N ++ +C + +A L G++PD TY++++SG+ ++ +
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L ++M D G PD +TYN+ + G A
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 157/342 (45%), Gaps = 26/342 (7%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE----------- 205
F+ + F ++++ L F + KL +P V +N L++G C E
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKL-GFQPDVVTFNTLLHGL--CLEDRISEALALFG 200
Query: 206 ------FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPN 259
F +A+ +D+MV + P V+TFN LI+G C + A L +M KG + +
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
VV++ T++ G +N+ +M E + V ++D LC +G A L
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ +G+ P F Y +++ C G A ++ ++ ++ P V+ LI +
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTY 438
K EA L ++ML I PD+VT+N ++ C R DA + L+AS PD +T+
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTF 435
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ Y R R EG L+ E+ G + + TYN+ + G
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 161/409 (39%), Gaps = 86/409 (21%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMV 217
+ FV+ NR + +A RK+ R ++IY N+LI F C + +L + ++
Sbjct: 112 VIGVFVRMNRPD---VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLF---------------REMREKGCNPNVVS 262
+ +PDVVTFN L+ G C + AL LF +M E G P V++
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
FNTLI G E + E + +M+ G VT +V+G+C G A L+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL------- 375
+ P Y ++++LC +G+ A + E+ +KG P+V +I+G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 376 ---RRLR-------------------------KGVEASGLMEKMLKEGILPDSVT----- 402
R LR K EA L ++ML I PD+VT
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 403 --------------------------FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
FN +++ C R + +L S +GL +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY+ L+ G+ + ++L EM+ G PD T N + G K
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 157 FHFAVNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F+ ++ + +A R+++G LL + R L+ + + YN LI+GF + + A +
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLV---ANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ V PD +T NIL+ GFC N+K + AL LF ++ + + V++N +I G
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K DE ++ + G E T +++ G C + + A L G P + Y
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG 360
L+ G ++E++ E+ G
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
+ D A+ F+D MVR R V N +I F R + D+A+ L+R+M + N+ SF
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
N L I+ C+ C L L G++ K
Sbjct: 145 NIL--------------------IKCFCD-----CHKLSFSLSTFGKLTKL--------- 170
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
G P + L+ LC E AL + + + G L E
Sbjct: 171 -GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL--------------------E 209
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L ++M++ G+ P +TFN L+ LC GR ++A L KGL D +TY +V+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
G + K NL+++M + PD+ Y++ +D L
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 163 AFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
F + ++ + L FE ++ +V+ YN++I+G K + D+A + + V+
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVA-YNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+N++ISGFC A LF +M++ G P+ ++NTLIRG + D+ + +
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
EM G + T +++ D L +GR+ K+
Sbjct: 630 ISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 145/297 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P +Y LI+GF K + A F+ M + PDV+T+ +ISGFC+ A L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KG P+ V+F LI G+ + + MI+ GC + VT L+DGLC
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
EG + A EL+ + + G+ P F Y +V LC GN A+++V E G +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTL++ + + +A ++++ML +G+ P VTFN L+ C G D ++L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
KG+ P+ T++ LV Y N K + +M G PD TY + + G AR
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D P V Y +I+GF + + +A + M ++PD VTF LI+G+C+ A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
+ M + GC+PNVV++ TLI G E D + +EM ++G + + T +V+G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC G + +A +LV +F G+ Y L++ C G A E++ E+ KG P+
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
++ L+ G + L+ ML +GI P++ TFN L++ C A +
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
++G+ PDG TY LV G+ + KE L EM +GF ++TY+ + G +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 485 K 485
K
Sbjct: 681 K 681
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 160 AVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN + + ++ E M++ +P+ IY +I + + +A + M+R
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD V + LI GFC+ A F EM + P+V+++ +I GF E
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +EM G E SVT L++G C G + A + + G P Y L++
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC EG+ A E++ E+WK G P++ +++ GL + EA L+ + G+ D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
+VT+ L++ C G A + KGL P +T+++L++G+ ++GE L+N
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 460 EMLDEGFIPDLATYNS 475
ML +G P+ T+NS
Sbjct: 586 WMLAKGIAPNATTFNS 601
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V Y+ ++NG+ + E DK + M R +KP+ + +I CR K A
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM +G P+ V + TLI GF YEM +T ++ G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G +++A +L + +G+ P + L+ C G+ A V + + + G P+V+
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TTLI+GL + A+ L+ +M K G+ P+ T+N ++ LC G +A +L
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
GL+ D +TY L+ Y + + + ++ EML +G P + T+N M+G
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 224 DVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF--FGERKFDEGVN 281
+V ++NI+I C+ + A L M KG P+V+S++T++ G+ FGE ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE------LD 298
Query: 282 MAYEMIEL----GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+++IE+ G + +S ++ LC ++ +A E + R+G+LP Y L+
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ C G+ A + E+ + P V+ T +I G ++ VEA L +M +G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PDSVTF L+ C G DA R+ G P+ +TY L+ G +E L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNA 483
++EM G P++ TYNS ++GL +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKS 504
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 192 IYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRN-KKFDLALGLFRE 250
+++V V +A +++M+ + V + N+ ++ ++ K A+ +FRE
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 251 MREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGR 310
E G NV S+N +I + E ++ M G ++ +V+G C G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 311 VLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTT 370
+ K +L+ R+G+ P + Y ++ LC A E E+ ++G LP + TT
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 371 LIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
LI+G + AS +M I PD +T+ ++ C +G V+A +L KG
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 431 LDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L+PD +T+ L++GY + K+ + N M+ G P++ TY + +DGL
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ YN ++NG K ++A+ + D VT+ L+ +C++ + D A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+ +EM KG P +V+FN L+ GF ++G + M+ G ++ T LV C
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ A + D RGV P Y LV+ C N A + E+ KG SV
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
+ LI+G + +K +EA + ++M +EG+ D F+
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 40/320 (12%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+N + KA M D AF +I P+V Y LI+G K + D A M +
Sbjct: 428 INGYCKAGHMKD---AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
++P++ T+N +++G C++ + A+ L E G N + V++ TL+ + + D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
+ EM+ G + + VT +L++G C G + +L+ +G+ P + LV+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ C + NL + A+ + + M G+ P
Sbjct: 605 QYC----------------IRNNLKA-------------------ATAIYKDMCSRGVGP 629
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+ L++ C +A L KG TY +L+ G+ + + E +
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 459 NEMLDEGFIPDLATYNSYMD 478
++M EG D ++ + D
Sbjct: 690 DQMRREGLAADKEIFDFFSD 709
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 285 EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEG 344
E E+G ++ + I++ +C GR+ +A L++ +G P Y +V C G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 345 NAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFN 404
++++ + +KG P+ ++I L R+ K EA +M+++GILPD+V +
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 405 CLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDE 464
L++ C G A + ++ + PD +TY ++SG+ + E L +EM +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 465 GFIPDLATYNSYMDGLSNA 483
G PD T+ ++G A
Sbjct: 416 GLEPDSVTFTELINGYCKA 434
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
N+ VK + + L A A+ K + R P Y L+ G K R +A + M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V T+++LI GF + KKF A +F +MR +G + F+ FF + K+
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD-----FFSDTKY 712
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 198/442 (44%), Gaps = 40/442 (9%)
Query: 66 NNQITPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRF 125
+ ITPS ++ ++++ +D A A + + HD ++F ++V L S+ +F
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSMAVFDS---ATAEYANGYVHDQSSFGYMVLRLVSANKF 67
Query: 126 SELHSVLNFISANPCPCSNDGI-------------------------FSCPEMERIFHFA 160
++ + C S D + F C ++ +
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTV 127
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFYDRMV 217
+ V+ N++N ++ MR+ I P+V+ NVLI CR D L + M
Sbjct: 128 LAILVEENQLNLAFKFYKNMRE-IGLPPTVASLNVLIKAL--CRNDGTVDAGLKIFLEMP 184
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD T+ LISG CR + D A LF EM EK C P VV++ +LI G G + D
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
E + EM G E + T L+DGLC +GR L+A EL RG P Y L+
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
LC E A+E++D + +G P +I G + K EA+ +++M+ GI
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 398 PDSVTFNCLLEDLCDVGRTVDAD------RLRLLASTKGLDPDGMTYHILVSGYTRENRR 451
P+ +T+N ++ +V R + A+ L L ++G+ + T LV ++
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424
Query: 452 KEGENLVNEMLDEGFIPDLATY 473
++ LV+E++ +G IP T+
Sbjct: 425 QKAVQLVDEIVTDGCIPSKGTW 446
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 214 DRMVRDRVKPDVVTFNILISGFCR-----NKKFDLALGLFREMREKGCNPNVVSFNTLIR 268
D +VR +++ VV+ +IL+S CR ++ FD +L +F +M++ C+P+ ++ T++
Sbjct: 72 DLIVRMKIENCVVSEDILLS-ICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 269 GFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC-NEGRVLKACELVIDFSRRGVL 327
E + + M E+G + + +L+ LC N+G V ++ ++ +RG
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P + Y L+ LC G A ++ E+ +K P+V+ T+LI GL + EA
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+E+M +GI P+ T++ L++ LC GR++ A L + +G P+ +TY L++G +
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + +E L++ M +G PD Y + G K
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 329 KDFD-------YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKG 381
KDFD Y ++ L E +A + + + G P+V + LI+ L R
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT 172
Query: 382 VEAS-GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHI 440
V+A + +M K G PDS T+ L+ LC GR +A +L K P +TY
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 441 LVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
L++G E + EM +G P++ TY+S MDGL +S++
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 176/339 (51%), Gaps = 9/339 (2%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGF 212
R++ +N++V++ +N L+ +++D P + +N L+ V F++ F
Sbjct: 95 RLYEVIINSYVQSQSLN---LSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF 151
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
++ + +V DV +F ILI G C + + + L E+ E G +PNVV + TLI G
Sbjct: 152 FNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
+ + ++ ++ +EM +LG + T +L++GL G + E+ GV P +
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y ++ +LC +G A +V DE+ ++G +++ TLI GL R K EA+ ++++M
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+GI P+ +T+N L++ C VG+ A L ++GL P +TY+ILVSG+ R+
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLS---NARKSVR 488
+V EM + G P TY +D + N K+++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 152/299 (50%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y VLING K + Y++M D V P++ T+N +++ C++ + A +F EMR
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E+G + N+V++NTLI G E K +E + +M G + +T L+DG C G++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
KA L D RG+ P Y LV C +G+ A ++V E+ ++G PS + T LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ R +A L M + G++PD T++ L+ C G+ +A RL K +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
P+ + Y+ ++ GY +E L+ EM ++ P++A+Y ++ L RKS R
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 210/495 (42%), Gaps = 52/495 (10%)
Query: 35 PPVTLPSVTLTPTAH---HTH--------------LLRFLKTHLLTPTNNQI-----TPS 72
PP+ S+ +P H HTH L ++ LL + +I T S
Sbjct: 19 PPLKAFSLLNSPNFHEFQHTHESISILLRLLLSGNLFSHAQSLLLQVISGKIHSQFFTSS 78
Query: 73 SLLHFLKSKLHHHPQFTHYDFHIFAWASTI--------------DSFRHDHTTFLFIVRS 118
SLLH+L +F Y+ I ++ + + F F +++
Sbjct: 79 SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF 138
Query: 119 LASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFE 178
+ S F++ S F + N D ++S F + +A + +F+
Sbjct: 139 VVGSSSFNQWWS---FFNENKSKVVLD-VYS-------FGILIKGCCEAGEIEK---SFD 184
Query: 179 AMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
+ +L + P+V IY LI+G K E +KA + M + + + T+ +LI+G
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+N ++ +M+E G PN+ ++N ++ + + + + EM E G + V
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+ GLC E ++ +A ++V G+ P Y L++ CG G G AL + +L
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+G PS++ L+ G R A+ ++++M + GI P VT+ L++
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
A +LRL GL PD TY +L+ G+ + + E L M+++ P+ YN+
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 477 MDGLSNARKSVRQTR 491
+ G S R +
Sbjct: 485 ILGYCKEGSSYRALK 499
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 4/289 (1%)
Query: 145 DGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCR 204
DG+F P + ++ +N K R D F+ MR+ ++ YN LI G +
Sbjct: 262 DGVF--PNL-YTYNCVMNQLCKDGRTKDAFQVFDEMRER-GVSCNIVTYNTLIGGLCREM 317
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ ++A D+M D + P+++T+N LI GFC K AL L R+++ +G +P++V++N
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
L+ GF + M EM E G + S VT IL+D + KA +L +
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G++P Y L+ C +G A + + +K P+ + T+I G + A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
L+++M ++ + P+ ++ ++E LC ++ +A+RL G+DP
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ + + ++N+ + M+ DG P++ YN LI+GF + KAL
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKS--DGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
+ + P +VT+NIL+SGFCR A + +EM E+G P+ V++ LI F
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M ELG T +L+ G C +G++ +A L + P + Y
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ C EG++ AL+++ E+ +K P+V + +IE L + RK EA L+EKM+ G
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 396 ILPDS 400
I P +
Sbjct: 544 IDPST 548
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ ++ F +MN+ F++M + + P+ IYN +I G+ K +AL M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG 269
+ P+V ++ +I C+ +K A L +M + G +P+ + + R
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 170/329 (51%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A K N+ D +++F +++ ++ YN+LIN F +C AL +M
Sbjct: 81 FSKLLSAIAKMNKF-DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +PD+VT N L++GFC + A+ L +M E G P+ V+F TLI G F K
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + M++ GC+ VT +V+GLC G A L+ + Y +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC + AL + E+ KG P+VI ++LI L + +AS L+ M++ I
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VTF+ L++ G+ V A++L + +DP+ TY L++G+ +R E +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++ M+ + +P++ TYN+ ++G A++
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR++D + + M ++ +P + LI+G + +A+ DRMV+
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +++G C+ DLAL L +M NVV ++T+I R D+ +
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + +T L+ LCN GR A L+ D R + P + L++
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
+G A ++ +E+ K+ P++ ++LI G L + EA ++E M+++ LP+
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ C R L S +GL + +TY L+ G+ + + + +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ G P++ TYN +DGL
Sbjct: 454 MVSVGVHPNILTYNILLDGL 473
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 1/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + +R++ L M KL P + N L+NGF A+ D+M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD VTF LI G + K A+ L M ++GC P++V++ ++ G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M E + V ++D LC A L + +GV P Y L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+++ + LI+ + K V+A L E+M+K I
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ T++ L+ C + R +A ++ L K P+ +TY+ L++G+ + R +G
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM G + + TY + + G AR
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 158/293 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K +FD + F ++M + ++ T+NILI+ FCR + LAL L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + + V + +M+E+G + +VT L+ GL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ +RG P Y +V LC G+ +AL +++++ +V+
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+T+I+ L + R +A L +M +G+ P+ +T++ L+ LC+ GR DA RL
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++P+ +T+ L+ + ++ + + E L EM+ P++ TY+S ++G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 15/352 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
++ D TF ++ L + SE ++++ + C P++ + VN
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ---------PDLV-TYGAVVNGL 228
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K D LA + K+ + +V IY+ +I+ K R D AL + M V+
Sbjct: 229 CKRG---DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+V+T++ LIS C ++ A L +M E+ NPN+V+F+ LI F + K + +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI+ + + T L++G C R+ +A +++ R+ LP Y L+ C
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ E+ ++G + + + TTLI G + R A + ++M+ G+ P+ +T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+N LL+ LC G+ A + ++PD TY+I++ G + + K G
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 1/331 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++A K + D +++F +++ ++ YN++IN + + AL +M
Sbjct: 68 FSKLLSAIAKMKKF-DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ P +VT N L++GFC + A+ L +M E G P+ V+F TL+ G F K
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
E V + M+ GC+ VT +++GLC G A L+ + + Y +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ LC + AL + E+ KG P V ++LI L + +AS L+ ML+ I
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VTFN L++ G+ ++A++L + +DP+ +TY+ L++G+ +R E +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
+ M+ + +PD+ TYN+ ++G A+K V
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ +++ K ++D L F M K I RP V Y+ LI+ + A
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGI--RPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTFN LI F + K A LF EM ++ +PN+V++N+LI GF
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE + M+ C VT L++G C +V+ EL D SRRG++ Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ + A V ++ G P+++ TL++GL + K +A + E + K
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N + E +C G+ D L S KG+ PD + Y+ ++SG+ ++ ++E
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L +M ++G +PD TYN+
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNT 560
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 156/293 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K ++FD + F ++M V ++ T+NI+I+ CR + AL +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + E V + +M+E+G + +VT LV GL
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +G P Y ++ LC G +AL +++++ K V+
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+T+I+ L + R +A L +M +GI PD T++ L+ LC+ GR DA RL
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++P+ +T++ L+ + +E + E E L +EM+ P++ TYNS ++G
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + ++++ L M KL G PS+ N L+NGF +A+ D+M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD VTF L+ G ++ K A+ L M KGC P++V++ +I G +
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M + E V ++D LC V A L + +G+ P F Y L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ +LI+ + K +EA L ++M++ I
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ VT+N L+ C R +A ++ L +K PD +TY+ L++G+ + + +G
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L +M G + + TY + + G A
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR+++ + + M ++ +P + L++G + + +A+ +RMV
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +I+G C+ + DLAL L +M + +VV ++T+I R D+ +
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G T L+ LCN GR A L+ D R + P + L++
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ ++ P+++ +LI G + EA + M+ + LPD
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ C + VD L S +GL + +TY L+ G+ + + + + +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G P++ TYN+ +DGL
Sbjct: 441 MVSDGVHPNIMTYNTLLDGL 460
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 149/300 (49%), Gaps = 6/300 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++AF K ++ + F+ M ++ ID P++ YN LINGF D+A +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV PDVVT+N LI+GFC+ KK + LFR+M +G N V++ TLI GFF
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ G + +T L+DGLC G++ KA + + + P + Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+ E +C G ++ L KG P VIA T+I G + EA L KM ++G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 396 ILPDSVTFNCLLE-DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
LPDS T+N L+ L D + A+ ++ + S + D TY LV+ + R +G
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR-FAGDASTYG-LVTDMLHDGRLDKG 608
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N LI+ F K + +A +D M++ + P++VT+N LI+GFC + + D A +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI GF +K +G+ + +M G ++VT L+ G
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A + GV P Y L++ LC G A+ V + L K P +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+ EG+ + K + L + +G+ PD + +N ++ C G +A L +
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD TY+ L+ + R+ + L+ EM F D +TY D L + R
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D+A+ + MV+ R P +V F+ L+S + KKFDL + +M G + N+ ++N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
+I + + + +M++LG S VT L++G C+ R+ +A LV
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + LV L A A+ +V+ + KG P ++ +I GL + + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM K I D V ++ +++ LC DA L KG+ PD TY L+S
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++ML+ P++ T+NS +D + K + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 173/347 (49%), Gaps = 15/347 (4%)
Query: 150 CPEMER--IFH------FAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLING 199
C +ME I H +N F + +++ AF M K++ P I+N L+NG
Sbjct: 111 CKQMESKGIAHSIYTLSIMINCFCRCRKLS---YAFSTMGKIMKLGYEPDTVIFNTLLNG 167
Query: 200 F-VKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNP 258
++CR +AL DRMV KP ++T N L++G C N K A+ L M E G P
Sbjct: 168 LCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 259 NVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV 318
N V++ ++ + + + +M E + +V I++DGLC +G + A L
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 319 IDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRL 378
+ +G Y L+ C G +++ ++ K+ P+V+ + LI+ +
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 379 RKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTY 438
K EA L+++M++ GI P+++T+N L++ C R +A ++ L +KG DPD MT+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+IL++GY + NR +G L EM G I + TYN+ + G + K
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 171/347 (49%), Gaps = 12/347 (3%)
Query: 142 CSNDGIFSCPEMERIFH-FAVNAFVKANRMNDGLLAFEA------MRKLIDGRP--SVSI 192
C N+ +F C ER F F+ ++++ GL+ +A R +I RP +V
Sbjct: 34 CPNELLFCC---ERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVID 90
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N L + K ++++ L +M + + T +I+I+ FCR +K A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G P+ V FNTL+ G E + E + + M+E+G + + +T LV+GLC G+V
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L+ G P + Y ++ +C G +A+E++ ++ ++ + + +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + A L +M +G D +T+N L+ C+ GR D +L + +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +L+ + +E + +E + L+ EM+ G P+ TYNS +DG
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 167/381 (43%), Gaps = 51/381 (13%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K +++ F M I G + + YN LI GF +D
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEME--IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ P+VVTF++LI F + K A L +EM ++G PN +++N+LI GF E +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+E + M MI GC+ +T IL++G C R+ EL + S RGV+ Y
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKML 392
LV+ C G +A ++ E+ + P +++ L++GL L K +E G +EK
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 393 KE--------------------------------GILPDSVTFNCLLEDLCDVGRTVDAD 420
E G+ D+ +N ++ +LC AD
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY------- 473
L + +G PD +TY+IL+ + ++ L+ EM GF D++T
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Query: 474 ------NSYMDGLSNARKSVR 488
S++D LS R S++
Sbjct: 624 SSGELDKSFLDMLSTTRASLK 644
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 161/327 (49%), Gaps = 1/327 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
IF+ +N R+++ L + M ++ +P++ N L+NG + A+ DR
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEM-GHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +P+ VT+ +++ C++ + LA+ L R+M E+ + V ++ +I G +
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D N+ EM G + +T L+ G CN GR +L+ D +R + P +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ EG A +++ E+ ++G P+ I +LI+G + + EA +++ M+ +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
PD +TFN L+ C R D L S +G+ + +TY+ LV G+ + + + +
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ PD+ +Y +DGL +
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCD 485
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 152/340 (44%), Gaps = 43/340 (12%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E +RK+ + + Y+++I+G K D A ++ M K D++T+N LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 233 SGFCRNKKFDLALGLFR-----------------------------------EMREKGCN 257
GFC ++D L R EM ++G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
PN +++N+LI GF E + +E + M MI GC+ +T IL++G C R+ EL
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL-- 375
+ S RGV+ Y LV+ C G +A ++ E+ + P +++ L++GL
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 376 -RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L K +E G +EK E D + ++ +C+ + DA L KG+ D
Sbjct: 486 NGELEKALEIFGKIEKSKME---LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
Y+I++S R++ + + L +M +EG PD TYN
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 36/295 (12%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++S + L +G V + D A+ + M++ R P V+ FN L S + K+++L L L
Sbjct: 53 NLSYRDKLSSGLVGIKA-DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC 111
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
++M KG ++ + + +I F RK + ++++LG E +V L++GLC E
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
RV +A LE+VD + + G+ P++I
Sbjct: 172 CRVSEA-----------------------------------LELVDRMVEMGHKPTLITL 196
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
TL+ GL K +A L+++M++ G P+ VT+ +L +C G+T A L
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+ + D + Y I++ G ++ NL NEM +GF D+ TYN+ + G NA
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 156/292 (53%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +FD + +RM R+ D+ ++NILI+ FCR + LAL +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ E V + +M + + ++VT L+ GL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A L+ RG P F Y +V LC G+ +AL ++ ++ K V+
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+I+ L + +A L +M +GI P+ VT+N L+ LC+ GR DA RL
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+ ++P+ +T+ L+ + +E + E E L +EM+ PD+ TY+S ++G
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I+ ++A +ND L F M K I RP+V YN LI + A
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L G+ +A ++ ++ G P +I + L++GL + K +A + E + K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ + Y ++SG+ R+ ++E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
+ L EM ++G +P+ TYN+
Sbjct: 555 DALFREMKEDGTLPNSGTYNT 575
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C PNVV++NTLI+GF ++ +EG+ + EM + G ++VT L+ GL
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G A ++ GV P Y L++ LC G AL V + L K P +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + + ++ C G +AD L
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ + L+ EM GF+ D +T + ++ L + R
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + +++ L M KL P + + L+NG+ + +A+ D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+P+ VTFN LI G + K A+ L M +GC P++ ++ T++ G
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++D LCN V A L + +G+ P Y L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L+ G+ + R +EG
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM G + + TYN+ + GL A
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQA 443
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 149/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ DVV + +I C K + AL
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG PNVV++N+LIR ++ + + +MIE + VT L+D
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P F Y L+ C A + + + K P+V+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ E L +M + G++ ++VT+N L++ L G A ++
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD +TY IL+ G + + ++ + + PD+ TYN ++G+ A K
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 156/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R+++ + + M +++ +P+ +N LI+G + +A+ DRMV
Sbjct: 157 LNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+ T+ +++G C+ DLAL L ++M + +VV + T+I + ++ +
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LCN GR A L+ D R + P + L++
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R + L S +GL + +TY+ L+ G + + + +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G PD+ TY+ +DGL
Sbjct: 456 MVSDGVPPDIITYSILLDGL 475
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + KA ++ DG F ++ L +P+V IY +I+GF + ++A + M
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
D P+ T+N LI R+ + L +EMR G
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 2/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P VS+YN LING K ++ A MV + P+V++++ LI+ C + + +LA
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIE-LGCEFSSVTCEILVDGLC 306
+M ++GC+PN+ + ++L++G F + +++ +MI G + + V LV G C
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
+ G ++KA + G P Y L+ G+ A+ + +++ G P+V+
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLL 425
T ++E L R K EA L+E M KE P TFN ++ LCD GR A+++ R +
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
P+ +TY+ L+ G + NR +E L E+ G +TYN+ + G NA
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 168/396 (42%), Gaps = 21/396 (5%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPE 152
H F + + F+H TF ++R LA + + +L + CS D S
Sbjct: 60 LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 119
Query: 153 MERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGF 212
+ R A A R+ + PSV IYN +++ +
Sbjct: 120 VYRQVGLAERAVEMFYRIKE-----------FGCDPSVKIYNHVLDTLLGENRIQMIYMV 168
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
Y M RD +P+V T+N+L+ C+N K D A L EM KGC P+ VS+ T+I
Sbjct: 169 YRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC- 227
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTC--EILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
V + E EL F V L++GLC E A EL+ + +G+ P
Sbjct: 228 ------EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV 281
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ LC G +A + ++ K+G P++ ++L++G +A L +
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 391 MLKE-GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M++ G+ P+ V +N L++ C G V A + G P+ TY L++G+ +
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ N+ML G P++ Y + ++ L K
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 18/324 (5%)
Query: 175 LAFEAMRKLID--GRPSVSIYNVLING-FVKCREFDKALGFYDRMVRD-RVKPDVVTFNI 230
LAF + +++ P++ + L+ G F++ FD AL +++M+R ++P+VV +N
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNT 357
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L+ GFC + A+ +F M E GC+PN+ ++ +LI GF D V + +M+ G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C + V +V+ LC + +A L+ S+ P + ++ LC G A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 351 EVVDELWKKGNL-PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLED 409
+V ++ ++ P+++ L++GL + + EA GL ++ G+ S T+N LL
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 410 LCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLD------ 463
C+ G A +L G PD +T ++++ Y ++ + + +MLD
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA----QMLDLVSCGR 593
Query: 464 EGFIPDLATYNSYMDGL--SNARK 485
+ PD+ +Y + + GL SN R+
Sbjct: 594 RKWRPDVISYTNVIWGLCRSNCRE 617
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)
Query: 148 FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREF 206
C R + +N F K ++ + + M L G P+V +Y ++ + +F
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM--LTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG-CNPNVVSFNT 265
+A + M ++ P V TFN I G C + D A +FR+M ++ C PN+V++N
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G + +E + E+ G E+SS T L+ G CN G A +LV G
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDG 558
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVD--ELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
P + ++ C +G A A +++D ++ P VI+ T +I GL R +
Sbjct: 559 KSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRED 618
Query: 384 ASGLMEKMLKEGILPD----SVTFNCLLEDLCDVGRTVD 418
L+E+M+ GI+P SV NC + D D+ R D
Sbjct: 619 GVILLERMISAGIVPSIATWSVLINCFILD--DIVRAHD 655
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 56/288 (19%)
Query: 92 DFHIFAWASTIDS-FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSC 150
D ++ W + S + + +V +L +F E S++ +S C
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA--------- 454
Query: 151 PEMERIFHFAVNAFVK----ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREF 206
P + NAF+K A R++ F M + P++ YN L++G K
Sbjct: 455 PSVP-----TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 207 DKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTL 266
++A G + V+ T+N L+ G C +AL L +M G +P+ ++ N +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 267 IRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL--VIDFSRR 324
I +AY C +G+ +A ++ ++ RR
Sbjct: 570 I--------------LAY---------------------CKQGKAERAAQMLDLVSCGRR 594
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
P Y ++ LC + +++ + G +PS+ + LI
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 158/292 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K ++FD + ++M R + + T+NILI+ FCR + LAL L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G ++T L+ GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL +++++ V+
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R +A L ++M +GI P+ VT++ L+ LC GR DA +L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L ++M+ PD+ TYNS ++G
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 7/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M E V ++D LC V A L + +G+ P Y L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++ ++ +K P+++ LI+ + K VEA L + M+K I
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+N L+ C R A ++ +K PD +TY+ L+ G+ + R ++G
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL------SNARKSVRQ 489
L EM G + D TY + + GL NA+K +Q
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLAL L +M +VV FNT+I R D+ +
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LC+ GR A +L+ D + + P + L++
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ D++ K+ P + +L+ G + +A + E M+ + PD
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C R D L S +GL D +TY L+ G + + + +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ TY+ +DGL N K
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGK 485
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 148/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI+ FVK +F +A YD M++ + PD+ T+N L++GFC + + D A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P+VV++NTLI+GF ++ ++G + EM G +VT L+ GL +
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ GV P Y L++ LC G ALEV D + K +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+IEG+ + K + L + +G+ P+ VT+N ++ LC +A L
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ + R+ + L+ EM F+ D +T + L + R
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 624
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y V++NG K + D AL ++M +++ DVV FN +I C+ + D AL
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE + VT L+D
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+ ++A +L D +R + P F Y LV C A ++ + + K P V+
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ + + L +M G++ D+VT+ L++ L G +A ++
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + + M D+ Y + ++G+ A K
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ +++ K ++D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P++VTFN LI F + KF A L+ +M ++ +P++ ++N+L+ GF
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ C VT L+ G C RV EL + S RG++ Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L +G+ A +V ++ G P ++ + L++GL K +A + + M K
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D + ++E +C G+ D L S KG+ P+ +TY+ ++SG + +E
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L+ +M ++G +P+ TYN+
Sbjct: 560 YALLKKMKEDGPLPNSGTYNT 580
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+G + MV+ R P +V FN L+S + KKFD+ + L +M+ + ++N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
LI F + + + +M++LG E S VT L++G C+ R+ A LV
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + L+ L A A+ +VD + ++G P+++ ++ GL + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM I D V FN +++ LC DA L TKG+ P+ +TY L+S
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++M+++ P+L T+N+ +D K V +
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + KA +++DG F ++ L +P+V YN +I+G R +A +
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M D P+ T+N LI R+ + L REMR
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F VN F R+++ + + M ++ RP + + LING +AL DRM
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEM-KQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD VT+ +++ C++ LAL LFR+M E+ +VV ++ +I + F
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ +++ EM G + VT L+ GLCN+G+ +++ + R ++P + L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ +E+ +G P I +LI+G + EA+ + + M+ +G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT++ L+ C R D RL S+KGL P+ +TY+ LV G+ + + +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ G P + TY +DGL +
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCD 467
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 164/313 (52%), Gaps = 5/313 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + FE+M I RP + +N L + + +++D LGF M + ++ D+
Sbjct: 50 KVNDAIDLFESM---IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T I+I+ +CR KK A + + G P+ ++F+TL+ GF E + E V + M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+ VT L++GLC +GRV +A L+ G P + Y ++ +LC GN+
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+AL++ ++ ++ SV+ + +I+ L + +A L +M +GI D VT++ L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ G+ D ++ + + PD +T+ L+ + +E + E + L NEM+ G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 467 IPDLATYNSYMDG 479
PD TYNS +DG
Sbjct: 347 APDTITYNSLIDG 359
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ + +DG + +R++I GR P V ++ LI+ FVK + +A Y+ M+
Sbjct: 287 IGGLCNDGKWDDGA---KMLREMI-GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ PD +T+N LI GFC+ A +F M KGC P++V+++ LI + ++ D
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 278 EGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLV 337
+G+ + E+ G +++T LV G C G++ A EL + RGV P Y L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 338 EKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
+ LC G ALE+ +++ K + +I G+ K +A L + +G+
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
PD VT+N ++ LC G +AD L G PD TY+IL+ + + L
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 458 VNEMLDEGFIPDLATYNSYMDGLSNAR 484
+ EM GF D +T +D LS+ R
Sbjct: 583 IEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N R+++ L+ + M + +P Y ++N K AL + +M
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K VV ++I+I C++ FD AL LF EM KG +VV++++LI G + K+D+G
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
M EMI VT L+D EG++L+A EL + RG+ P Y L++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C E A ++ D + KG P ++ + LI + ++ + L ++ +G++P++
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
+T+N L+ C G+ A L ++G+ P +TY IL+ G + + +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M + YN + G+ NA K
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASK 505
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 148/291 (50%)
Query: 195 VLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK 254
++IN + + ++ A R + +PD +TF+ L++GFC + A+ L M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 255 GCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
P++V+ +TLI G + + E + + M+E G + VT +++ LC G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
+L R + Y +++ LC +G+ AL + +E+ KG V+ ++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L K + + ++ +M+ I+PD VTF+ L++ G+ ++A L T+G+ PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+TY+ L+ G+ +EN E + + M+ +G PD+ TY+ ++ A++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 122/290 (42%), Gaps = 36/290 (12%)
Query: 196 LINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKG 255
L NG V + D A+ ++ M++ R P + FN L S R K++DL LG + M G
Sbjct: 42 LRNGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
E T I+++ C + ++L A
Sbjct: 101 I-----------------------------------EHDMYTMTIMINCYCRKKKLLFAF 125
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
++ + G P + LV C EG A+ +VD + + P ++ +TLI GL
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
+ EA L+++M++ G PD VT+ +L LC G + A L + +
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV 245
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ Y I++ ++ + +L NEM +G D+ TY+S + GL N K
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
T +I R +K + A ++ + K G PD++TF+ L+ C GR +A L
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
PD +T L++G + R E L++ M++ GF PD TY ++ L + S
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I++ ++ A++++D F ++ +P V YNV+I G K +A + +
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M D PD T+NILI ++ L EM+ G + + + +I +R+
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI-DMLSDRR 609
Query: 276 FDE 278
D+
Sbjct: 610 LDK 612
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 156/332 (46%), Gaps = 34/332 (10%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ YN ++NG+ K ++A + ++V + PD T+ LI G+C+ K D A +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F EM KGC N V++ LI G R+ DE +++ +M + C + T +L+ LC
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R +A LV + G+ P Y L++ LC + A E++ ++ +KG +P+VI
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 368 CTTLIEGL----------------------------RRLRKGV------EASGLMEKMLK 393
LI G L KG +A G++ KML+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+LPD VT+N L++ C G A RL L + +GL PD TY ++ + R +E
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+L + + +G P++ Y + +DG A K
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 177 FEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
FE KLI G YN L+N + D+ Y M+ D+V P++ T+N +++G+C
Sbjct: 175 FELKYKLIIG-----CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ + A ++ E G +P+ ++ +LI G+ + D + EM GC + V
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
L+ GLC R+ +A +L + P Y L++ LCG AL +V E+
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
+ G P++ T LI+ L K +A L+ +ML++G++P+ +T+N L+ C G
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
DA + L ++ L P+ TY+ L+ GY + N K ++N+ML+ +PD+ TYNS
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSL 468
Query: 477 MDG 479
+DG
Sbjct: 469 IDG 471
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ +N + K + D + E M RKL P+ YN LI G+ K KA+G +
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKL---SPNTRTYNELIKGYCK-SNVHKAMGVLN 451
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+M+ +V PDVVT+N LI G CR+ FD A L M ++G P+ ++ ++I +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ +E ++ + + G + V L+DG C G+V +A ++ + LP +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC +G A + +++ K G P+V T LI L + A ++ML
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G PD+ T+ ++ C GR +DA+ + G+ PD TY L+ GY +
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGL 480
+++ M D G P T+ S + L
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 20/349 (5%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+++ K+ R+ + F+++ + P+V +Y LI+G+ K + D+A ++M+
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P+ +TFN LI G C + K A L +M + G P V + LI + FD
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +M+ G + + T + C EGR+L A +++ GV P F Y L++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASG-------------- 386
G A +V+ + G PS +LI+ L ++ G +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 387 ----LMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL-RLLASTKGLDPDGMTYHIL 441
L+EKM++ + P++ ++ L+ +C+VG A+++ + +G+ P + ++ L
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 442 VSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQT 490
+S + + E +V++M+ G +P L + + GL + R T
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 143/343 (41%), Gaps = 57/343 (16%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ ++ ++ + L E M K I +P+VS +LI+ +K +FD A + +M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVK-IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF------ 270
+ KPD T+ I +CR + A + +MRE G +P++ ++++LI+G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 271 ---------------------------------FGERK--------------FDEGVNMA 283
+G++K FD V +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 284 YEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR--GVLPKDFDYFGLVEKLC 341
+M+E ++ + E L+ G+C G L+ E V D +R G+ P + + L+ C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGN-LRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 342 GEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSV 401
A +VVD++ G+LP + +C LI GL + + + + + +L+ G D +
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 402 TFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
+ +++ + G L + G TY +L+ G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 86/223 (38%), Gaps = 35/223 (15%)
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
+NTL+ DE + EM+E + T +V+G C G V +A + V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G+ P F Y L+ C + A +V +E+ KG + +A T LI GL R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
EA L KM + P T+ L++ LC
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCG------------------------------ 335
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R+ E NLV EM + G P++ TY +D L + K
Sbjct: 336 -----SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 186/398 (46%), Gaps = 6/398 (1%)
Query: 93 FHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN-DGIFS-- 149
F F W+ T + F+H ++ + L + + + +SVL + + C D ++S
Sbjct: 126 FKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTR 185
Query: 150 --CPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFD 207
C +F + + + + + F M++ P N L++ F K + D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRF-RVFPKTRSCNGLLHRFAKLGKTD 244
Query: 208 KALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLI 267
F+ M+ +P V T+NI+I C+ + A GLF EM+ +G P+ V++N++I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 268 RGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL 327
GF + D+ V EM ++ CE +T L++ C G++ E + G+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 328 PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGL 387
P Y LV+ C EG A++ ++ + G +P+ T+LI+ ++ +A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 388 MEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTR 447
+ML+ G+ + VT+ L++ LCD R +A+ L T G+ P+ +Y+ L+ G+ +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 448 ENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
L+NE+ G PDL Y +++ GL + K
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 41/361 (11%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ F K R++D + FE M+ + P V YN LIN F K + L FY M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ +KP+VV+++ L+ FC+ A+ + +MR G PN ++ +LI
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+++G E++ VT L+DGLC+ R+ +A EL GV+P Y L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ N ALE+++EL +G P ++ T I GL L K A +M +M + GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 397 LPDS-----------------------------------VTFNCLLEDLCD---VGRTVD 418
+S VTF L++ LC V + V
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV- 597
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
D +++ GL + + ++ G ++N+ + L +M+ +G +PD Y S MD
Sbjct: 598 -DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 479 G 479
G
Sbjct: 657 G 657
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 139/282 (49%), Gaps = 34/282 (12%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+++ YN LI+GFVK + D+AL + + +KPD++ + I G C +K + A +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM+E G N + + TL+ +F EG+++ EM EL E + VT +L+DGLC
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
V KA +D+ R + DF GL + NA I
Sbjct: 590 NKLVSKA----VDYFNR--ISNDF---GL------QANAAIF------------------ 616
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T +I+GL + + A+ L E+M+++G++PD + L++ G ++A LR +
Sbjct: 617 -TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
G+ D + Y LV G + N+ ++ + + EM+ EG PD
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ ++A+ K+ +GL + M++L D +V + VLI+G K + KA+ +++R
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKEL-DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 216 MVRD-RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
+ D ++ + F +I G C++ + + A LF +M +KG P+ ++ +L+ G F +
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
E + + +M E+G + + LV GL + ++ KA + + G+ P +
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
+++K G A+E+ L K L S
Sbjct: 723 SVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 65/146 (44%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+ + +I+ +I+G K + + A +++MV+ + PD + L+ G + AL
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L +M E G +++++ +L+ G + + + EMI G V C ++
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFD 332
G + +A EL + +L D D
Sbjct: 730 ELGCIDEAVELQSYLMKHQLLTSDND 755
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 158/292 (54%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K ++FD + ++M R + ++ T+NILI+ FCR + LAL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G ++T L+ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +A +++++ V+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R +A L ++M +GI P+ VT++ L+ LC GR DA +L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L ++M+ PD+ TYNS ++G
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 7/339 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ +M E V ++D LC V A L + +G+ P Y L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++ ++ +K P+++ LI+ + K VEA L + M+K I
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T+N L+ C R A ++ +K PD TY+ L+ G+ + R ++G
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL------SNARKSVRQ 489
L EM G + D TY + + GL NA+K +Q
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 87 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLA L +M +VV FNT+I R D+ +
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + VT L+ LC+ GR A +L+ D + + P + L++
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ D++ K+ P + +LI G + +A + E M+ + PD
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N L++ C R D L S +GL D +TY L+ G + + + +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
M+ +G PD+ TY+ +DGL N K
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGK 410
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P++ +N LI+ FVK +F +A +D M++ + PD+ T+N LI+GFC + + D A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C P++ ++NTLI+GF ++ ++G + EM G +VT L+ GL +
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+G A ++ GV P Y L++ LC G ALEV D + K +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TT+IEG+ + K + L + +G+ P+ VT+N ++ LC +A L
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G PD TY+ L+ + R+ + L+ EM F+ D +T + L + R
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGR 549
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P++ Y V++NG K + D A ++M +++ DVV FN +I C+ + D AL
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF+EM KG PNVV++++LI ++ + + +MIE + VT L+D
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG+ ++A +L D +R + P F Y L+ C A ++ + + K P +
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI+G + ++ + + L +M G++ D+VT+ L++ L G +A ++
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ PD MTY IL+ G + ++ + + M D+ Y + ++G+ A K
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
IF+ +++ K ++D L F+ M K I RP+V Y+ LI+ + A
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGI--RPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P++VTFN LI F + KF A L +M ++ +P++ ++N+LI GF
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+ M M+ C T L+ G C RV EL + S RG++ Y
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ L +G+ A +V ++ G P ++ + L++GL K +A + + M K
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
I D + ++E +C G+ D L S KG+ P+ +TY+ ++SG + +E
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
L+ +M ++G +PD TYN+
Sbjct: 485 YALLKKMKEDGPLPDSGTYNT 505
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ + KA +++DG F ++ L +P+V YN +I+G R +A +
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
M D PD T+N LI R+ + L REMR
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRP--SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
++ND + F M K RP S+ +N L++ VK +++D + +M ++ D+
Sbjct: 65 KLNDAIDLFSDMVK---SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
TFNI+I+ FC + LAL + +M + G P+ V+ +L+ GF + + V++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+G + V ++D LC RV A + + R+G+ P Y LV LC
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
A ++ ++ KK P+VI + L++ + K +EA L E+M++ I PD VT++ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC R +A+++ L +KG D ++Y+ L++G+ + R ++G L EM G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 467 IPDLATYNSYMDGLSNA 483
+ + TYN+ + G A
Sbjct: 362 VSNTVTYNTLIQGFFQA 378
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN F + NR++D + + M + I +P + YN +I+ K + + A F+ + R
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
++P+VVT+ L++G C + ++ A L +M +K PNV++++ L+ F K E
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM+ + + VT L++GLC R+ +A ++ +G L Y L+
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C +++ E+ ++G + + + TLI+G + +A +M GI PD
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
T+N LL LCD G A + + +D D +TY ++ G + + +E +L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
+ +G PD+ TY + M GL
Sbjct: 461 LSLKGLKPDIVTYTTMMSGL 480
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 152/332 (45%), Gaps = 7/332 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F+ +N F +++ L M KL P L+NGF + A+ D+M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD+V +N +I C+ K+ + A F+E+ KG PNVV++ L+ G ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +MI+ + +T L+D G+VL+A EL + R + P Y L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ D + KG L V++ TLI G + ++ + L +M + G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK---GLDPDGMTYHILVSGYTRENRRKE 453
+ ++VT+N L++ G D D+ + S G+ PD TY+IL+ G ++
Sbjct: 362 VSNTVTYNTLIQGFFQAG---DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +M D+ TY + + G+ K
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 3/317 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAF-EAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
++ +++ K R+ND F E RK I RP+V Y L+NG + A
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGI--RPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ P+V+T++ L+ F +N K A LF EM +P++V++++LI G +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE M M+ GC V+ L++G C RV +L + S+RG++ Y
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ G+ A E ++ G P + L+ GL + +A + E M K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D VT+ ++ +C G+ +A L S KGL PD +TY ++SG + E E
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 456 NLVNEMLDEGFIPDLAT 472
L +M EG + + T
Sbjct: 491 ALYTKMKQEGLMKNDCT 507
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 11/311 (3%)
Query: 161 VNAFVKANRMNDGL-LAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
VN ++R +D L + ++K I P+V Y+ L++ FVK + +A ++ MVR
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKI--TPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ PD+VT++ LI+G C + + D A +F M KGC +VVS+NTLI GF ++ ++G
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + EM + G ++VT L+ G G V KA E G+ P + Y L+
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G AL + +++ K+ ++ TT+I G+ + K EA L + +G+ PD
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
VT+ ++ LC G + + L +GL + T + L+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIK 521
Query: 460 EMLDEGFIPDL 470
+ML G+ P L
Sbjct: 522 KMLSCGYAPSL 532
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 156/305 (51%), Gaps = 4/305 (1%)
Query: 182 KLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNK 239
K+I RP SI ++ +++ K + +D + + M + D+ ++NI+I+ CR
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFF-GERKFDEGVNMAYEMIELGCEFSSVTC 298
+F +AL + +M + G P+VV+ ++LI GF G R FD +++ +M E+G V
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIY 177
Query: 299 EILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
++DG C G V A EL R GV Y LV LC G A ++ ++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
+ +P+VI T +I+ + K EA L E+M + + PD T+N L+ LC GR +
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ L TKG PD +TY+ L++G+ + R EG L EM G + D TYN+ +
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 479 GLSNA 483
G A
Sbjct: 358 GYFQA 362
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 33/340 (9%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F + NR+ D + M ++ RP V IYN +I+G K + A+ +DRM RD
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEM-GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V+ D VT+N L++G C + ++ A L R+M + PNV++F +I F E KF E +
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ EM + T L++GLC GRV +A +++ +G LP Y L+
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR----------------------- 377
C ++ E+ ++G + I T+I+G +
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Query: 378 --LRKGV-------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L G+ +A L E M K I D T+N ++ +C +G DA L S
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
KGL PD ++Y ++SG+ R+ + + + L +M ++G +P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 5/289 (1%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCR-NKKFDLALGLFREM 251
YN++IN +C F AL +M++ +PDVVT + LI+GFC+ N+ FD A+ L +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKM 165
Query: 252 REKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRV 311
E G P+VV +NT+I G ++ V + M G +VT LV GLC GR
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 312 LKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
A L+ D R ++P + +++ EG A+++ +E+ ++ P V +L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I GL + EA +++ M+ +G LPD VT+N L+ C R + +L + +GL
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
D +TY+ ++ GY + R + + + M P++ TY+ + GL
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 142/280 (50%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
++ + + +M++ R P +V F+ ++S ++K +DL + LF M G ++ S+N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
+I +F +++ +M++ G E VT L++G C RV A +LV G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
P Y +++ C G A+E+ D + + G + +L+ GL + +A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
LM M+ I+P+ +TF +++ G+ +A +L + + +DPD TY+ L++G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
R E + +++ M+ +G +PD+ TYN+ ++G +++
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N + +R L M K P V + LINGF + A+ +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+PDVV +N +I G C+ + A+ LF M G + V++N+L+ G ++
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + +M+ + +T ++D EG+ +A +L + +RR V P F Y L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A +++D + KG LP V+ TLI G + ++ E + L +M + G+
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
+ D++T+N +++ GR D + + S P+ TY IL+ G R ++
Sbjct: 346 VGDTITYNTIIQGYFQAGR---PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALV 402
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L M D+ TYN + G+
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGM 426
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + + +A R + F M D RP++ Y++L+ G +KAL ++ M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ ++ D+ T+NI+I G C+ + A LFR + KG P+VVS+ T+I GF +R++
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 277 DEGVNMAYEMIELG 290
D+ + +M E G
Sbjct: 468 DKSDLLYRKMQEDG 481
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 168/314 (53%), Gaps = 5/314 (1%)
Query: 169 RMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRMVRDRVKPDVV 226
+++D + F M K RP SI+ N L++ K ++FD + ++M R + ++
Sbjct: 65 KLDDAIGLFGGMVK---SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 227 TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
T+NILI+ FCR + LAL L +M + G P++V+ ++L+ G+ ++ + V + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 287 IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNA 346
+E+G ++T L+ GL + +A LV +RG P Y +V LC G+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 347 GIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCL 406
+A +++++ +V+ +T+I+ L + R +A L +M +G+ P+ +T++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 407 LEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF 466
+ LC+ R DA RL + ++P+ +T++ L+ + +E + E E L +EM+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 467 IPDLATYNSYMDGL 480
PD+ TY+S ++G
Sbjct: 362 DPDIFTYSSLINGF 375
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N F + ++++ L M KL PS+ + L+NG+ + A+ D+M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +PD +TF LI G + K A+ L M ++GC PN+V++ ++ G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ +M E + V ++D LC A L + +GV P Y L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC A ++ ++ ++ P+V+ LI+ + K VEA L ++M+K I
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY+ L++G+ + R EG
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM G + + TY + + G AR
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + R++D + + M ++ RP + LI+G + +A+ DRMV+
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+P++VT+ ++++G C+ DLA L +M NVV ++T+I R D+ +
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G + +T L+ LCN R A L+ D R + P + L++
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L+ C R + L S +GL + +TY L+ G+ + + + +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ +G P++ TYN+ +DGL
Sbjct: 461 MVSDGVHPNIMTYNTLLDGL 480
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 1/317 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
I+ +++ K +D L F M RP+V Y+ LI+ + A
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ ++ P+VVTFN LI F + K A L+ EM ++ +P++ ++++LI GF +
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
DE +M MI C + VT L++G C R+ + EL + S+RG++ Y
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ + A V ++ G P+++ TL++GL + K +A + E + +
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ P T+N ++E +C G+ D L S KG+ PD + Y+ ++SG+ R+ ++E +
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 456 NLVNEMLDEGFIPDLAT 472
L +M ++G +PD T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 181/387 (46%), Gaps = 17/387 (4%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
+R D TF ++ L + SE ++++ + C P + + VN
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ---------PNLV-TYGVVVNGL 235
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K ++ LAF + K+ + +V IY+ +I+ K R D AL + M V+
Sbjct: 236 CKRGDID---LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
P+V+T++ LIS C +++ A L +M E+ NPNVV+FN LI F E K E +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EMI+ + T L++G C R+ +A + + P Y L+ C
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
+E+ E+ ++G + + + TTLI G + R A + ++M+ +G+ P+ +T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+N LL+ LC G+ A + ++P TY+I++ G + + ++G +L +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 463 DEGFIPDLATYNSYMDGLSNARKSVRQ 489
+G PD+ YN+ + G RK +++
Sbjct: 533 LKGVKPDVIIYNTMISGF--CRKGLKE 557
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 176 AFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
A+ ++++I RP+V IY LI F++ F A+ M + PD+ +N LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEF 293
G + K+ D A EM E G PN ++ I G+ +F EM E G
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 294 SSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVV 353
+ V C L++ C +G+V++AC +G+L Y L+ L A E+
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
E+ KG P V + LI G +L +AS + ++M++EG+ P+ + +N LL C
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATY 473
G A L S KGL P+ +TY ++ GY + E L +EM +G +PD Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 474 NSYMDG 479
+ +DG
Sbjct: 736 TTLVDG 741
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 13/318 (4%)
Query: 166 KANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDV 225
KA + DG++A LI P Y LI G+ CRE + G Y+ +V + + V
Sbjct: 365 KAKALFDGMIA----SGLI---PQAQAYASLIEGY--CREKNVRQG-YELLVEMKKRNIV 414
Query: 226 V---TFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
+ T+ ++ G C + D A + +EM GC PNVV + TLI+ F +F + + +
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 283 AYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCG 342
EM E G L+ GL R+ +A +++ G+ P F Y +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 343 EGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVT 402
A + V E+ + G LP+ + CT LI + K +EA M+ +GIL D+ T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 403 FNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEML 462
+ L+ L + DA+ + KG+ PD +Y +L++G+++ ++ ++ +EM+
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 463 DEGFIPDLATYNSYMDGL 480
+EG P++ YN + G
Sbjct: 655 EEGLTPNVIIYNMLLGGF 672
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 50/364 (13%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALG 211
+ + +N K ++++D F MR G+ P V Y VLINGF K KA
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMR----GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 212 FYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
+D MV + + P+V+ +N+L+ GFCR+ + + A L EM KG +PN V++ T+I G+
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 272 GERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL-------------- 317
E + EM G S LVDG C V +A +
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 318 -------VIDFSR--------RGVLPKDFDYFG---------LVEKLCGEGNAGIALEVV 353
V F + ++ FD FG +++ LC EGN A E+
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 354 DELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDV 413
++ +P+VI T+L+ G ++ + E + ++ + GI PD + ++ ++
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 414 GRTVDADRLRLLASTKGLDPDGMTYHI-----LVSGYTRENRRKEGENLVNEMLDEGFIP 468
G T A L K DG I L+SG+ + + E ++ M+ +IP
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 469 DLAT 472
D AT
Sbjct: 949 DSAT 952
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y+VLI+G K + + A M V D T+++LI G + + D A GL EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
G N ++ I E ++ + MI G + L++G C E V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ EL+++ +R ++ + Y +V+ +C G+ A +V E+ G P+V+ TTLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+ + + +A ++++M ++GI PD +N L+ L R +A + GL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
P+ TY +SGY + + V EM + G +P+
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 141/347 (40%), Gaps = 84/347 (24%)
Query: 156 IFHFAV--NAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGF 212
+F + V N F K M F+ M + +G P+V IYN+L+ GF + E +KA
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRG--- 269
D M + P+ VT+ +I G+C++ A LF EM+ KG P+ + TL+ G
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 270 ---------FFGERK---------FDEGVNMAYEM--IELGCEF---------------S 294
FG K F+ +N ++ EL E +
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 295 SVTCEILVDGLCNEGRVLKACEL------------VIDFS----------RR-------- 324
VT I++D LC EG + A EL VI ++ RR
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 325 -----GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK-----GNLPSVIACTTLIEG 374
G+ P Y ++ EG AL +VD+++ K G S+ C L+ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDAD 420
++ + A +ME M++ +PDS T L+ + C + V+AD
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEAD 971
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 175 LAFEAMRKLIDG------RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTF 228
L E + +L+DG +P+ YN++I+ K + A + +M + P V+T+
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 229 NILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM-- 286
L++G+ + + +F E G P+ + ++ +I F E + + + +M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 287 ---IELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGE 343
++ GC+ S TC L+ G G + A +++ + R +P L+ + C
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Query: 344 GNAGIALEVV 353
N + + V
Sbjct: 964 SNQRVEADAV 973
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 155/293 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +F+ + ++M + D+ T++I I+ FCR + LAL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G + + T L+ GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL ++ ++ K V+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L +M +GI PD T++ L+ LC+ GR DA RL
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++P+ +T+ L+ + +E + E E L +EM+ PD+ TY+S ++G
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 153/293 (52%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y++ IN F + + AL +M++ +PD+VT + L++G+C +K+ A+ L +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
E G P+ +F TLI G F K E V + +M++ GC+ VT +V+GLC G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
A L+ + + Y +++ LC + AL + E+ KG P V ++LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
L + +AS L+ M++ I P+ VTF+ L++ G+ V+A++L + +D
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
PD TY L++G+ +R E +++ M+ + P++ TY++ + G A++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 1/328 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL P + + L+NG+ + A+ D+M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD TF LI G + K A+ L +M ++GC P++V++ T++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +++ +M + E V ++DGLC + A L + +G+ P F Y L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ ++ ++ P+V+ + LI+ + K VEA L ++M+K I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD T++ L+ C R +A + L +K P+ +TY L+ G+ + R +EG
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L EM G + + TY + + G AR
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 141/266 (53%), Gaps = 8/266 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++AFVK ++ + ++ M ++ ID P + Y+ LINGF D+A ++
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M+ P+VVT++ LI GFC+ K+ + + LFREM ++G N V++ TLI GFF R
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ +G + +T IL+DGLC G++ KA + R + P + Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E +C G E+ L KG P+VIA T+I G R EA L++KM ++G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADR 421
LP+S T+N L+ R D DR
Sbjct: 569 PLPNSGTYNTLIR-----ARLRDGDR 589
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 162/321 (50%), Gaps = 3/321 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM-RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
I++ ++ K M+D L F M K I RP V Y+ LI+ + A
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGI--RPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ ++ P+VVTF+ LI F + K A L+ EM ++ +P++ ++++LI GF
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ DE +M MI C + VT L+ G C RV + EL + S+RG++ Y
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ + A V ++ G P+++ L++GL + K +A + E + +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
+ PD T+N ++E +C G+ D L S KG+ P+ + Y+ ++SG+ R+ ++E
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 455 ENLVNEMLDEGFIPDLATYNS 475
++L+ +M ++G +P+ TYN+
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNT 578
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 155/320 (48%), Gaps = 1/320 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N + + R++D + + M ++ +P + LI+G + +A+ D+MV+
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +++G C+ DLAL L ++M + +VV +NT+I G + D+ +
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
N+ EM G T L+ LCN GR A L+ D R + P + L++
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
EG A ++ DE+ K+ P + ++LI G + EA + E M+ + P+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT++ L++ C R + L S +GL + +TY L+ G+ + + + +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 461 MLDEGFIPDLATYNSYMDGL 480
M+ G P++ TYN +DGL
Sbjct: 459 MVSVGVHPNILTYNILLDGL 478
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 143/297 (48%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V ++ LI+ FVK + +A YD M++ + PD+ T++ LI+GFC + + D A +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F M K C PNVV+++TLI+GF ++ +EG+ + EM + G ++VT L+ G
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A + GV P Y L++ LC G A+ V + L + P +
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+IEG+ + K + L + +G+ P+ + +N ++ C G +AD L
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ R+ L+ EM GF D +T + L + R
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 147/299 (49%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + Y ++NG K + D AL +M + +++ DVV +N +I G C+ K D AL
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
LF EM KG P+V ++++LI ++ + + +MIE + VT L+D
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG++++A +L + +R + P F Y L+ C A + + + K P+V+
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
+TLI+G + ++ E L +M + G++ ++VT+ L+ +A +
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ G+ P+ +TY+IL+ G + + + + + PD+ TYN ++G+ A K
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 7/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRK--LIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F ++ ++ L+ F ++++ LI P IY +LI G+ + A+ +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLI---PDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M++ DVVT+N ++ G C+ K A LF EM E+ P+ + LI G
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ + +M E VT L+DG G + A E+ D + +LP Y
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
LV LC +G+ A V DE+ K P+V+ C ++I+G R + +EKM+ E
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRL--RLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G +PD +++N L+ A L ++ GL PD TY+ ++ G+ R+N+ K
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E E ++ +M++ G PD +TY ++G
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 39/343 (11%)
Query: 176 AFEAMRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRD------------- 219
AFE M + G+ P V YN +ING K ++++A + M+R
Sbjct: 289 AFELMNAM-PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 220 ----------------------RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCN 257
V PD+V F+ ++S F R+ D AL F ++E G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 258 PNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACEL 317
P+ V + LI+G+ + +N+ EM++ GC VT ++ GLC + +A +L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 318 VIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRR 377
+ + R + P + L++ C GN A+E+ ++ +K V+ TL++G +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 378 LRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMT 437
+ A + M+ + ILP ++++ L+ LC G +A R+ +K + P M
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 438 YHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ ++ GY R +GE+ + +M+ EGF+PD +YN+ + G
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 17/384 (4%)
Query: 100 STIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHF 159
ST + + + F ++R+ + + E H + + S D
Sbjct: 156 STFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID-------------- 201
Query: 160 AVNAFVKA-NRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYDRM 216
A NA + + R+ LA+ +++ +++Y N+++N K + +K F ++
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V PD+VT+N LIS + + A L M KG +P V ++NT+I G K+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + EM+ G S T L+ C +G V++ ++ D R V+P + +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ GN AL + + + G +P + T LI+G R A L +ML++G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D VT+N +L LC +AD+L + + L PD T IL+ G+ + +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
L +M ++ D+ TYN+ +DG
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGF 525
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 161 VNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K + + + F+ M+ K I R V YN L++GF K + D A + MV
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRI--RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P ++++IL++ C A ++ EM K P V+ N++I+G+ +G
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +MI G ++ L+ G E + KA FGLV+K
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA-------------------FGLVKK 645
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
+ E + G +P V +++ G R + EA ++ KM++ G+ PD
Sbjct: 646 M--------------EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
T+ C++ +A R+ +G PD
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
+ VNA + + AF ++I +P+V I N +I G+ + F +
Sbjct: 553 YSILVNALCSKGHLAE---AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREK--GCNPNVVSFNTLIRGFFG 272
+M+ + PD +++N LI GF R + A GL ++M E+ G P+V ++N+++ GF
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
+ + E + +MIE G T +++G ++ + +A + + +RG P D
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 349 ALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLE 408
A E L KG S+ AC LI L R+ A G+ +++ + G+ + T N ++
Sbjct: 184 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243
Query: 409 DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIP 468
LC G+ KG+ PD +TY+ L+S Y+ + +E L+N M +GF P
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 469 DLATYNSYMDGLSNARKSVR 488
+ TYN+ ++GL K R
Sbjct: 304 GVYTYNTVINGLCKHGKYER 323
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 6/323 (1%)
Query: 162 NAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNV--LINGFVKCREFDKALGFYDRMVRD 219
N K R + LAF RK+++ ++ ++ L+ +V+ R+ A G M++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+V NIL+ G CRN + A+ L REMR P+V S+NT+IRGF ++ ++
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ +A EM GC +S VT IL+D C G++ +A + + G+ Y L+
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 340 L--CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGIL 397
CGE + G AL DE+ ++G+ P I TLI G +L + EAS + E M++ G+
Sbjct: 257 FCDCGELDRGKAL--FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 398 PDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENL 457
P+ T+ L++ LC VG+T +A +L L K +P+ +TY+I+++ ++ + +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 458 VNEMLDEGFIPDLATYNSYMDGL 480
V M PD TYN + GL
Sbjct: 375 VELMKKRRTRPDNITYNILLGGL 397
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P V YN +I GF + +E +KAL + M +VT+ ILI FC+ K D A+G
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM+ G ++V + +LIRGF + D G + E++E G ++T L+ G C
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G++ +A E+ RGV P + Y GL++ LCG G AL++++ + +K P+ +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL--RLL 425
+I L + +A ++E M K PD++T+N LL LC G +A +L +L
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 426 ASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ DPD ++Y+ L+ G +ENR + ++ + ++++ D T N
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 2/290 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+N+L+ G + E KA+ M R+ + PDV ++N +I GFC K+ + AL L EM+
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
GC+ ++V++ LI F K DE + EM +G E V L+ G C+ G +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+ L + RG P Y L+ C G A E+ + + ++G P+V T LI
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + K EA L+ M+++ P++VT+N ++ LC G DA + L +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEML-DEGFI-PDLATYNSYMDGL 480
PD +TY+IL+ G + E L+ ML D + PD+ +YN+ + GL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 156/356 (43%), Gaps = 38/356 (10%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
++AF KA +M++ + + M K + + +Y LI GF C E D+ +D ++
Sbjct: 219 IDAFCKAGKMDEAMGFLKEM-KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
P +T+N LI GFC+ + A +F M E+G PNV ++ LI G G K E +
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ MIE E ++VT I+++ LC +G V A E+V +R P + Y L+ L
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 341 CGEGNAGIALEVVDELWKKGNL--PSVIACTTLIEGL---RRLRKGVEASGLMEKMLKEG 395
C +G+ A +++ + K + P VI+ LI GL RL + ++ L+ + L G
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 396 --------------------------------ILPDSVTFNCLLEDLCDVGRTVDADRLR 423
I+ +S T+ +++ C G A L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 424 LLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L P Y+ L+S +E + L EM + PD+ ++N +DG
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 16/335 (4%)
Query: 151 PEMERIFHFAVNAFVKAN-----RMNDGLLAF----EAMRKL-----IDGRPSVSIYNVL 196
E IF F + V+ N + DGL EA++ L D P+ YN++
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
IN K A+ + M + R +PD +T+NIL+ G C D A L M +
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 257 --NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
+P+V+S+N LI G E + + +++ ++E VT IL++ G V KA
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 315 CELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
EL S ++ Y +++ C G +A ++ ++ PSV L+
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
L + +A L E+M ++ PD V+FN +++ G A+ L + S GL PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPD 469
TY L++ + + E + ++M+D GF PD
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 139/319 (43%), Gaps = 17/319 (5%)
Query: 180 MRKLIDGRPSVSIYNVLINGF----VKCR--------EFDKALGFYDRMVRDRVKPDVVT 227
+RKL++ R +Y+ L+N F K R + A+ + + V D
Sbjct: 20 VRKLLNPR----VYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAV-DSGSSLAFA 74
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
N L++ R++ +LA +R+M E N VS + L+ + RK + M+
Sbjct: 75 GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
+ G F+ IL+ GLC KA L+ + R ++P F Y ++ C
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
ALE+ +E+ G S++ LI+ + K EA G +++M G+ D V + L+
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
CD G L +G P +TY+ L+ G+ + + KE + M++ G
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 468 PDLATYNSYMDGLSNARKS 486
P++ TY +DGL K+
Sbjct: 315 PNVYTYTGLIDGLCGVGKT 333
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ K NR++ L ++ + + + V+ N+L+N +K + +KA+ + ++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQI 485
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ + T+ +I GFC+ ++A GL +MR P+V +N L+ E
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D+ + EM V+ I++DG G + A L++ SR G+ P F Y L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ + G A+ D++ G P C ++++ + + + L++K++ + I
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
+ D +++ +C+ +D + RLL T
Sbjct: 666 VLDKELTCTVMDYMCNSSANMDLAK-RLLRVT 696
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 220/467 (47%), Gaps = 22/467 (4%)
Query: 35 PPVT--LPSVTLTPTAHHTHLLRFLKTHLLTPTNNQITPSSLLHFLKSKLHHHPQFTHYD 92
PP + L ++T T+ TH FL+T L P QIT L L S T
Sbjct: 6 PPESQLLKTLTSILTSEKTH---FLET--LNPYIPQITQPLLTSLLSSPSLAKKPETLVS 60
Query: 93 FHIFAWASTIDSFRHDHTT-FLFIVRSLASSYRFSELHSVL-NFISANPCPCS--NDGI- 147
F +A S ++F D + +VRSL S ++F++ S+L ++I + S N +
Sbjct: 61 FFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLH 120
Query: 148 ----FSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVK- 202
S P + +F A++A++ + + L F+ M +L +P++ N L+ G V+
Sbjct: 121 PNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRL-KLKPNLLTCNTLLIGLVRY 179
Query: 203 --CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREM-REKGCNPN 259
A +D MV+ V +V TFN+L++G+C K + ALG+ M E NP+
Sbjct: 180 PSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPD 239
Query: 260 VVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVI 319
V++NT+++ + + + + +M + G + VT LV G C G + +A ++V
Sbjct: 240 NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 320 DFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLR 379
+ VLP Y L+ LC G+ LE++D + P V+ TLI+G L
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 380 KGVEASGLMEKMLKEGILPDSVTFNCLLEDLC-DVGRTVDADRLRLLASTKGLDPDGMTY 438
+EA LME+M +G+ + VT N L+ LC + R +++ L G PD +TY
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 439 HILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
H L+ Y + ++ EM +G + T N+ +D L RK
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 158/330 (47%), Gaps = 3/330 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ +N A M +GL +AM+ L +P V YN LI+G + +A ++M
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE-KGCNPNVVSFNTLIRGFFGERK 275
D VK + VT NI + C+ +K + +E+ + G +P++V+++TLI+ +
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ M EM + G + +++T ++D LC E ++ +A L+ +RG + + Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L+ E ALE+ DE+ K P+V +LI GL K A +++ + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+LPD TFN ++ C GR A + PD T +IL++G +E ++
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
N N +++E + D TYN+ + +K
Sbjct: 612 NFFNTLIEEREV-DTVTYNTMISAFCKDKK 640
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 39/304 (12%)
Query: 180 MRKLIDGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFC 236
+++L+D P + Y+ LI ++K + AL M + +K + +T N ++ C
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 237 RNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV 296
+ +K D A L ++G + V++ TLI GFF E K ++ + M EM ++ +
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 297 TCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDEL 356
T L+ GLC+ G+ A E + + G+LP D + ++ C EG A E +E
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 357 WKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRT 416
K P C L+ GL + G+ EK L FN L+E+ R
Sbjct: 583 IKHSFKPDNYTCNILLNGLCK-------EGMTEKALN--------FFNTLIEE-----RE 622
Query: 417 VDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSY 476
VD +TY+ ++S + ++ + KE +L++EM ++G PD TYNS+
Sbjct: 623 VDT----------------VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 477 MDGL 480
+ L
Sbjct: 667 ISLL 670
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF---GERKFDEG 279
P F+I +S + K +AL +F++M PN+++ NTL+ G
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDF-SRRGVLPKDFDYFGLVE 338
+ +M+++G + T +LV+G C EG++ A ++ S V P + Y +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
+ +G E++ ++ K G +P+ + L+ G +L EA ++E M + +LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N L+ LC+ G + L + L PD +TY+ L+ G E L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+M ++G + T+N + L K TR
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 154/299 (51%), Gaps = 1/299 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ ++ L++ K +FD + ++M + ++ T++I I+ FCR + LAL +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ N+L+ GF + E V + +M+E+G + +VT LV GL
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +G P Y ++ LC G +AL +++++ K V+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+GL + + +A L KM +GI PD T+N L+ LC+ GR DA RL
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGF-IPDLATYNSYMDGLSNARK 485
K ++PD + ++ L+ + +E + E E L +EM+ PD+ YN+ + G ++
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 1/221 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDR-VKPDVVTFNILISGFCRNKKFDLALG 246
P + +N LI+ FVK + +A YD MV+ + PDVV +N LI GFC+ K+ + +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+FREM ++G N V++ TLI GFF R D + +M+ G +T IL+DGLC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
N G V A + +R + Y ++E LC G ++ L KG P+V+
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
TT++ G R EA L +M ++G LP+S T+N L+
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 173/418 (41%), Gaps = 51/418 (12%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAF 164
++ D TF +V L + SE +++ + C P++ + +N
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ---------PDL-VTYGAVINGL 225
Query: 165 VKANRMNDGLLAFEAMRKLIDGR--PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVK 222
K + LA + K+ G+ V IYN +I+G K + D A +++M +K
Sbjct: 226 CKRGEPD---LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 223 PDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNM 282
PDV T+N LIS C ++ A L +M EK NP++V FN LI F E K E +
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 283 AYEMIELG-CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVL-------------- 327
EM++ C V L+ G C RV + E+ + S+RG++
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 328 ---------------------PKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
P Y L++ LC GN AL V + + K+ ++
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TT+IE L + K + L + +G+ P+ VT+ ++ C G +AD L +
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ L+ EM GF D +T+ + L + R
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGR 580
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 171/386 (44%), Gaps = 72/386 (18%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
+N F NR+++ + + M ++ +P + L++G + + +A+ +RMV
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+PD+VT+ +I+G C+ + DLAL L +M + +VV +NT+I G + D+
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
++ +M G + T L+ LCN GR A L+ D + + P + L++
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 341 CGEGNAGIALEVVDELWK-KGNLPSVIACTTLIEGL---RRLRKGVE------------- 383
EG A ++ DE+ K K P V+A TLI+G +R+ +G+E
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 384 -------------------ASGLMEKMLKEGILPDSVTFNCLL----------------- 407
A + ++M+ +G+ PD +T+N LL
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 408 ------------------EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
E LC G+ D L S KG+ P+ +TY ++SG+ R+
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNS 475
++E + L EM ++G +P+ TYN+
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNT 536
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%)
Query: 205 EFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFN 264
+ D A+G + MV+ R P +V F+ L+S + KFDL + L +M+ G + N+ +++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 265 TLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRR 324
I F + + + +M++LG S VT L++G C+ R+ +A LV
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 325 GVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEA 384
G P + LV L A A+ +V+ + KG P ++ +I GL + + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 385 SGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSG 444
L+ KM K I D V +N +++ LC DA L TKG+ PD TY+ L+S
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 445 YTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
R + L+++ML++ PDL +N+ +D K V +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F + K N+ + + + M L S + +LI+ F +C AL +M
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS-FTILIHCFCRCSRLSLALALLGKM 140
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
++ +P +VT L++GFC+ +F A+ L M G PNVV +NT+I G R
Sbjct: 141 MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ + + Y M + G +VT L+ GL N GR A L+ D +R + P + L
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EGN A + E+ ++ +P+V +LI G +A + + M+ +G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD VT+N L+ C R D +L + +GL D TY+ L+ GY + + +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ N M+D G PD+ TYN +D L N K
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
RPS+ L+NGF + F +A+ D M P+VV +N +I+G C+N+ + AL
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
+F M +KG + V++NTLI G ++ + + +M++ + + + L+D
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
EG +L+A L + RR V+P F Y L+ C G G A + D + KG P V+
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
TLI G + ++ + L +M +G++ D+ T+N L+ C G+ A ++
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
G+ PD +TY+IL+ + ++ +V ++ D+ TYN + GL K
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 42/352 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG---RPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+N F + NR + + ++M DG P+V IYN +ING K R+ + AL + M
Sbjct: 156 LNGFCQGNRFQEAVSLVDSM----DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 218 RDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFD 277
+ ++ D VT+N LISG + ++ A L R+M ++ +PNV+ F LI F E
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 278 EGVNMAYEMIEL-----------------------------------GCEFSSVTCEILV 302
E N+ EMI GC VT L+
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
G C RV +L + + +G++ F Y L+ C G +A +V + + G
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P ++ L++ L K +A ++E + K + D +T+N +++ LC + +A L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
+ KG+ PD + Y ++SG R+ ++E + L M ++GF+P Y+
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 157 FHFAVNAFVK-ANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F ++ FVK N + L E +R+ + P+V YN LINGF A +D
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSV--VPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV PDVVT+N LI+GFC++K+ + + LF EM +G + ++NTLI G+ K
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
+ + M++ G VT IL+D LCN G++ KA +V D + + Y
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
+++ LC A + L +KG P IA T+I GL R EA L +M ++G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 396 ILPDSVTFNCLLED 409
+P ++ L D
Sbjct: 495 FMPSERIYDETLRD 508
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%)
Query: 203 CREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVS 262
C +FD A + M++ R P +V F +++ + KFD+ + L+ +M G + ++ S
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 263 FNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFS 322
F LI F + + + +M++LG S VT L++G C R +A LV
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 323 RRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGV 382
G +P Y ++ LC + ALEV + KKG + TLI GL +
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 383 EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILV 442
+A+ L+ M+K I P+ + F L++ G ++A L + + P+ TY+ L+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 443 SGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+G+ + + + + M+ +G PD+ TYN+ + G +++
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++ L+ E ++K + + YN++I G + + +A + +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQK-SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFF 271
R VKPD + + +ISG CR A L R M+E G P+ ++ +R +
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 15/334 (4%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIY--NVLINGFVKCREFDKALGFYD 214
+ ++ F + ++ D L+F + +++D +S+Y N LING K + A GF
Sbjct: 405 YSILIDMFCRRGKL-DTALSF--LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ +++P VVT+ L+ G+C K + AL L+ EM KG P++ +F TL+ G F
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ V + EM E + + VT ++++G C EG + KA E + + + +G++P + Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ LC G A A VD L K + I T L+ G R K EA + ++M++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK-----GLDPDGMTYHILVSGYTREN 449
G+ D V + L++ G DR K GL PD + Y ++ ++
Sbjct: 642 GVDLDLVCYGVLID-----GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
KE + + M++EG +P+ TY + ++GL A
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 1/328 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+++ +++ K + ++ L F+ M K I RP+ Y++LI+ F + + D AL F
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGK-IGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV +K V +N LI+G C+ A G EM K P VV++ +L+ G+ + K
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + +EM G S T L+ GL G + A +L + + V P Y
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E C EG+ A E + E+ +KG +P + LI GL + EA ++ + K
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ + + LL C G+ +A + +G+D D + Y +L+ G + RK
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNA 483
L+ EM D G PD Y S +D S
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 140/288 (48%), Gaps = 2/288 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
YNVLI+G K ++ +A+G + +KPDVVT+ L+ G C+ ++F++ L + EM
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+P+ + ++L+ G K +E +N+ +++ G + L+D LC +GR
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC-KGRKF 383
Query: 313 KACELVID-FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTL 371
EL+ D + G+ P D Y L++ C G AL + E+ G SV +L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G + A G M +M+ + + P VT+ L+ C G+ A RL + KG+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P T+ L+SG R ++ L NEM + P+ TYN ++G
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 42/421 (9%)
Query: 105 FRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSN--DGIFSCPEMERI-----F 157
F H +F ++ +L + F S+L + S+ + +FSC E ++ F
Sbjct: 100 FDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSF 159
Query: 158 HFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMV 217
+ +V++ R+ DG+L F+ M + P V + L++G VK R F A+ ++ MV
Sbjct: 160 DLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV 219
Query: 218 RDRVKPDV-----------------------------------VTFNILISGFCRNKKFD 242
++PDV V +N+LI G C+ +K
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 243 LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILV 302
A+G+ +++ K P+VV++ TL+ G ++F+ G+ M EM+ L S LV
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 303 DGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNL 362
+GL G++ +A LV GV P F Y L++ LC A + D + K G
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 363 PSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL 422
P+ + + LI+ R K A + +M+ G+ +N L+ C G A+
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 423 RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSN 482
K L+P +TY L+ GY + + + L +EM +G P + T+ + + GL
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 483 A 483
A
Sbjct: 520 A 520
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 181/419 (43%), Gaps = 21/419 (5%)
Query: 69 ITPSSLL---HFLKSKLHHHPQFTHYDFHIFAWASTID-SFRHDHTTFLFIVRSLASSYR 124
IT SLL L + LH +F H+ + + + R D + ++RSL
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 125 FSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLI 184
S ++ + A C + P ++ ++ K ++ + + ++K +
Sbjct: 243 LSRAKEMIAHMEATGCD-----VNIVP-----YNVLIDGLCKKQKVWEAV----GIKKDL 288
Query: 185 DGR---PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
G+ P V Y L+ G K +EF+ L D M+ R P + L+ G + K
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
+ AL L + + + G +PN+ +N LI RKF E + M ++G + VT IL
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+D C G++ A + + G+ + Y L+ C G+ A + E+ K
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 362 LPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADR 421
P+V+ T+L+ G K +A L +M +GI P TF LL L G DA +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 422 LRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
L + + P+ +TY++++ GY E + + EM ++G +PD +Y + GL
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 9/328 (2%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ +A + D + F M + + +P+ YNV+I G+ + + KA F M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEW-NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ PD ++ LI G C + A + + C N + + L+ GF E K
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+E +++ EM++ G + V +L+DG L+ + RG+ P D Y +
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ G+ A + D + +G +P+ + T +I GL + EA L KM
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 397 LPDSVTFNCLLEDL----CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
+P+ VT+ C L+ L D+ + V+ A KGL + TY++L+ G+ R+ R +
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHN----AILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGL 480
E L+ M+ +G PD TY + ++ L
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINEL 832
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 2/281 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
Y L++GF + + ++AL MV+ V D+V + +LI G ++K L GL +EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
++G P+ V + ++I F E + MI GC + VT +++GLC G V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLC-GEGNAGIALEVVDELWKKGNLPSVIACTTL 371
+A L +P Y ++ L GE + A+E+ + + K G L + L
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNML 793
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
I G R + EAS L+ +M+ +G+ PD +T+ ++ +LC A L + KG+
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
PD + Y+ L+ G + L NEML +G IP+ T
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 21/299 (7%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
S + + +LI+ VK F A ++ +KP V FN+L S +
Sbjct: 103 STASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCY------------- 148
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSV-TCEILVDGLCN 307
EK + SF+ LI+ + R+ +GV + MI V T L+ GL
Sbjct: 149 ----EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVK 204
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
A EL D G+ P + Y G++ LC + A E++ + G +++
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGR-TVDADRLRLLA 426
LI+GL + +K EA G+ + + + + PD VT+ L+ LC V + + + +
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ P LV G + + +E NLV ++D G P+L YN+ +D L RK
Sbjct: 325 CLR-FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
+ + YN+LI GF + ++A RM+ D V PD +T+ +I+ CR A+ L
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
+ M EKG P+ V++NTLI G + + + EM+ G
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ +N L++ K +F+ + ++M + D+ T++I I+ FCR + LAL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+ ++L+ G+ ++ + V + +M+E+G + + T L+ GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +A LV +RG P Y +V LC G+ +AL +++++ +V+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T+I+ L + R A L +M +GI P+ VT+N L+ LC+ GR DA RL
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
K ++P+ +T++ L+ + +E + E E L EM+ PD TYN ++G
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 1/327 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
+ +N F + ++++ L M KL P + + L+NG+ + A+ D+M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V KPD TF LI G + K A+ L +M ++GC P++V++ T++ G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D +N+ +M + + V ++D LC V A +L + +G+ P Y L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A ++ + +K P+V+ LI+ + K VEA L E+M++ I
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
PD++T+N L+ C R +A ++ +K P+ TY+ L++G+ + R ++G
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNA 483
L EM G + + TY + + G A
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 5/298 (1%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+V +N LI+ F K + +A ++ M++ + PD +T+N+LI+GFC + + D A +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F+ M K C PN+ ++NTLI GF ++ ++GV + EM + G ++VT ++ G
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 308 EGRVLKACELVIDFSRRGVLPKDF-DYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVI 366
G A ++V +P D Y L+ LC G AL + L K ++
Sbjct: 446 AGDCDSA-QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 367 ACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+IEG+ + K EA L + I PD VT+N ++ LC +AD L
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
G P+ TY+ L+ R+ R L+ EM GF+ D +T + + L + R
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 157 FHFAVNAFVKANRMNDG-LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
F+ ++AF K ++ + L E +++ ID P YN+LINGF D+A +
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSID--PDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV P++ T+N LI+GFC+ K+ + + LFREM ++G N V++ T+I+GFF
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D + +M+ +T IL+ GLC+ G++ A + + + F Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++E +C G G A ++ L K P V+ T+I GL R EA L KM ++G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 396 ILPDSVTFNCLLE-DLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
LP+S T+N L+ +L D R A+ ++ + S+ G D T ++ +
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS-GFVGDASTISLVTN 613
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ + L+ R ++ + F +M + D+ +F ILI FCR + AL +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+M + G P++V+F +L+ GF + + ++ M++ G E + V L+DGLC
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + A EL+ + ++G+ Y L+ LC G A ++ ++ K+ P V+
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
T LI+ + EA L ++M++ + P++VT+N ++ LC GR DA + L +
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+KG P+ +TY+ L+SG+ + EG L M EGF D+ TYN+ + G K
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 1/329 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F ++ F + +R++ L M KL PS+ + L++GF A M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V+ +P+VV +N LI G C+N + ++AL L EM +KG +VV++NTL+ G ++
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
+ M +M++ VT L+D +G + +A EL + + V P + Y +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ LC G A + D + KG P+V+ TLI G + R E L ++M EG
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D T+N L+ C VG+ A + ++ + PD +T+ IL+ G +
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++M + + YN + GL A K
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 40/368 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG--RPSVSIYNVLINGFVKCREFDKALGFYD 214
F ++ F NR+ D AF + ++ P+V +YN LI+G K E + AL +
Sbjct: 144 FGSLLHGFCLVNRIGD---AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + + DVVT+N L++G C + ++ A + R+M ++ NP+VV+F LI F +
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
DE + EMI+ + ++VT +++GLC GR+ A + + +G P Y
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L+ C +++ + +G + TLI G ++ K A + M+
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 395 GILPDSVT-----------------------------------FNCLLEDLCDVGRTVDA 419
+ PD +T +N ++ LC + A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L +G+ PD TY I++ G + R+E + L+ M +EG I + + +++
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEE 500
Query: 480 LSNARKSV 487
S++ K +
Sbjct: 501 HSSSNKEI 508
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 140/298 (46%), Gaps = 12/298 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS+ YN+L++G K A M R+ V PD VT+ L+ G+C K D A L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
+EM C PN + N L+ + + E + +M E G +VTC I+VDGLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + KA E+V G L GN+ I L V D L + LP +I
Sbjct: 479 SGELDKAIEIVKGMRVHGSAA-----------LGNLGNSYIGL-VDDSLIENNCLPDLIT 526
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
+TL+ GL + + EA L +M+ E + PDSV +N + C G+ A R+
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
KG TY+ L+ G +N+ E L++EM ++G P++ TYN+ + L K
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 160/360 (44%), Gaps = 40/360 (11%)
Query: 161 VNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
V+ F K+N ++ F+ +R + + +PSV +YN+L+ +K R + Y MV
Sbjct: 82 VSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLC 141
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P TFN+LI C + D A LF EM EKGC PN +F L+RG+ D+G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
+ + M G + V +V C EGR + ++V G++P + +
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 340 LCGEGNAGIALEV-----VDE-------------LWKKG--------------------- 360
LC EG A + +DE L KG
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDAD 420
+L S+ + ++GL R K +EA ++++M +GI P ++N L++ LC +G DA
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 421 RLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+ L G+ PD +TY L+ GY + ++L+ EM+ +P+ T N + L
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 30/350 (8%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGR-PSVSIYNVLINGFVKCREFDKALGFYD 214
I++ V++F + R +D E MR+ +G P + +N I+ K + A +
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMRE--EGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 215 RMVRDRV----KPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGF 270
M D +P+ +T+N+++ GFC+ + A LF +RE ++ S+N ++G
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 271 FGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKD 330
KF E + +M + G S + IL+DGLC G + A +V R GV P
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 331 FDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK 390
Y L+ C G A ++ E+ + LP+ C L+ L ++ + EA L+ K
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 391 MLKEGILPDSVTFNCLLEDLCDVG------RTVDADRLRLLASTKGLD------------ 432
M ++G D+VT N +++ LC G V R+ A+ L
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 433 -----PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
PD +TY L++G + R E +NL EM+ E PD YN ++
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P + Y+ L+NG K F +A + M+ ++++PD V +NI I FC+ K A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
++M +KGC+ ++ ++N+LI G + + E + EM E G + T + LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV----VDELWKKGNLP 363
+V A L+ + ++ + P F + L+E C + +A EV V +K L
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRL- 422
S++ L G + ++A+ L+E +L G + + L+E LC A +
Sbjct: 702 SLMFNELLAAG-----QLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGIL 756
Query: 423 -RLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+++ G DP + ++ G + +KE + ++M++ + ++A
Sbjct: 757 HKMIDRGYGFDPAALM--PVIDGLGKMGNKKEANSFADKMMEMASVGEVAN 805
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 34/315 (10%)
Query: 194 NVLINGFVKCREFDKALGFY-----------------------DRMVRDRVKPDVVTFNI 230
N++++G E DKA+ D ++ + PD++T++
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
L++G C+ +F A LF EM + P+ V++N I F + K + +M + G
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
C S T L+ GL + ++ + L+ + +G+ P Y ++ LC A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML-----KEGILPDSVTFNC 405
++DE+ +K P+V + LIE ++ A + E + KEG+ S+ FN
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY--SLMFNE 707
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
LL G+ + A L +G + Y LV +++ + ++++M+D G
Sbjct: 708 LLA----AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 466 FIPDLATYNSYMDGL 480
+ D A +DGL
Sbjct: 764 YGFDPAALMPVIDGL 778
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 105/273 (38%), Gaps = 47/273 (17%)
Query: 161 VNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKAL-------- 210
+N KA R + F M KL +P YN+ I+ F K + A
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKL---QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 211 ---------------------------GFYDRMVRDRVKPDVVTFNILISGFCRNKKFDL 243
G D M + P++ T+N I C +K +
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 244 ALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG---CEFSSVTCEI 300
A L EM +K PNV SF LI F FD MA E+ E C +
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFD----MAQEVFETAVSICGQKEGLYSL 703
Query: 301 LVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKG 360
+ + L G++LKA EL+ RG F Y LVE LC + +A ++ ++ +G
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 361 NLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
A +I+GL ++ EA+ +KM++
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
A L ++M ++G P+ TF L+ C G T L + G+ P+ + Y+ +VS
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 444 GYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVRQTR 491
+ RE R + E +V +M +EG +PD+ T+NS + L K + +R
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 1/330 (0%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDR 215
+F A+NAF K ++ + + F M + P+V +N +I+G C +D+A F ++
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEE-AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 333
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
MV ++P ++T++IL+ G R K+ A + +EM +KG PNV+ +N LI F
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
++ + + M+ G +S T L+ G C G+ A L+ + G +
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
++ LC AL V E+ + P TTLI GL + K +A L + L +G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D+ T N LL LC+ G+ +A R++ +G D ++Y+ L+SG + + E
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Query: 456 NLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
++EM+ G PD TY+ + GL N K
Sbjct: 574 MFLDEMVKRGLKPDNYTYSILICGLFNMNK 603
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 157/345 (45%), Gaps = 35/345 (10%)
Query: 170 MNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFN 229
M D L F L + P + LI+G K + KAL + + + D T N
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 230 ILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIEL 289
L+ G C K D A + +E+ +GC + VS+NTLI G G++K DE EM++
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 290 GCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF--------------- 334
G + + T IL+ GL N +V +A + D R G+LP + Y
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 335 --------------------GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEG 374
L+ C G +ALE+ +++ KG P+ T+LI+G
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 375 LRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPD 434
+ + + EA L E+M EG+ P+ + L++ +G+ V + L +K + P+
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 435 GMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
+TY +++ GY R+ E L+NEM ++G +PD TY ++ G
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS + N+L+ V+ EF K +D + + V PDV F I+ FC+ K + A+ L
Sbjct: 237 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKL 295
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
F +M E G PNVV+FNT+I G ++DE +M+E G E + +T ILV GL
Sbjct: 296 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 355
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
R+ A ++ + +++G P Y L++ G+ A+E+ D + KG +
Sbjct: 356 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 415
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
TLI+G + + A L+++ML G + +F ++ LC A R
Sbjct: 416 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 475
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ + P G L+SG + + + L + L++GF+ D T N+ + GL A K
Sbjct: 476 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%)
Query: 206 FDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNT 265
FD AL F M+ + P LISG C++ K AL L+ + KG + + N
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523
Query: 266 LIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRG 325
L+ G K DE + E++ GC V+ L+ G C + ++ +A + + +RG
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583
Query: 326 VLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEAS 385
+ P ++ Y L+ L A++ D+ + G LP V + +I+G + + E
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643
Query: 386 GLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGY 445
++M+ + + P++V +N L+ C GR A LR KG+ P+ TY L+ G
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703
Query: 446 TRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSVR 488
+ +R +E + L EM EG P++ Y + +DG + V+
Sbjct: 704 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 16/264 (6%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P Y++LI G + ++A+ F+D R+ + PDV T++++I G C+ ++ +
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
F EM K PN V +N LIR + + + + +M G +S T L+ G+
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 307 NEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV---VDELWKKGNLP 363
RV +A L + G+ P F Y L++ G G G ++V + E+ K P
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALID---GYGKLGQMVKVECLLREMHSKNVHP 761
Query: 364 SVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLR 423
+ I T +I G R EAS L+ +M ++GI+PDS+T+ + G ++A
Sbjct: 762 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA---- 817
Query: 424 LLASTKGLDPDGMTYHILVSGYTR 447
KG D + Y ++ G+ +
Sbjct: 818 ----FKGSDEE--NYAAIIEGWNK 835
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 229 NILISGFCRNKKFD---LALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYE 285
++LI +C K D LAL +F + KG P+ + N L+ +F + A++
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFD 263
Query: 286 MIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGN 345
++ G ++ C G+V +A +L GV P + +++ L G
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 323
Query: 346 AGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNC 405
A +++ ++G P++I + L++GL R ++ +A ++++M K+G P+ + +N
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383
Query: 406 LLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEG 465
L++ + G A ++ L +KGL TY+ L+ GY + + E L+ EML G
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443
Query: 466 FIPDLATYNS 475
F + ++ S
Sbjct: 444 FNVNQGSFTS 453
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLR-------------KGV------------ 382
+AL+V L KG PS C L+ L R KGV
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAIN 281
Query: 383 ---------EASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
EA L KM + G+ P+ VTFN +++ L GR +A + +G++P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
+TY ILV G TR R + ++ EM +GF P++ YN+ +D A
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAMR-KLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
+++ + A+ ++ R++ L E M+ K I P+ + Y LI G ++A ++
Sbjct: 660 VYNHLIRAYCRSGRLSMALELREDMKHKGIS--PNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M + ++P+V + LI G+ + + L REM K +PN +++ +I G+ +
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKA 314
E + EM E G S+T + + G +G VL+A
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 6/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCRE---FDKALGFY 213
F ++A+ K + +F M++ D RP V YNV++ V RE F A Y
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEF-DCRPDVFTYNVILR--VMMREEVFFMLAFAVY 186
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+ M++ P++ TF IL+ G + + A +F +M +G +PN V++ LI G
Sbjct: 187 NEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQR 246
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+ + YEM G SV L+DG C GR+++A EL+ F + G + Y
Sbjct: 247 GSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY 306
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ L A E+ + KK P +I T LI+GL + K +A L+ M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+GI PD+ +N +++ LC G + L+L S PD T+ IL+ R +E
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
E + E+ G P +AT+N+ +DGL +
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 148/333 (44%), Gaps = 15/333 (4%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVR 218
++ F K RM + AFE +R + + Y+ LI+G + R + +A Y M++
Sbjct: 275 LDGFCKLGRMVE---AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD++ + ILI G + K + AL L M KG +P+ +N +I+ G +E
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
G ++ EM E + T IL+ +C G V +A E+ + + G P + L++
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEK------ML 392
LC G A ++ ++ + P+ + G R VE+ +++
Sbjct: 452 GLCKSGELKEARLLLHKM--EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
G PD V++N L+ C G A +L + KGL PD +TY+ L++G R R +
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E L D P A Y S M RK
Sbjct: 570 EAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRK 600
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
V D F +LIS + + + A+ F M+E C P+V ++N ++R E F
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLA 182
Query: 281 NMAY-EMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
Y EM++ C + T IL+DGL +GR A ++ D + RG+ P Y L+
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+A A ++ E+ GN P +A L++G +L + VEA L+ K+G +
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVN 459
++ L++ L R A L K + PD + Y IL+ G ++ + ++ L++
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 460 EMLDEGFIPDLATYNSYMDGL 480
M +G PD YN+ + L
Sbjct: 363 SMPSKGISPDTYCYNAVIKAL 383
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 348 IALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLL 407
+A V +E+ K P++ L++GL + + +A + + M GI P+ VT+ L+
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 408 EDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFI 467
LC G DA +L T G PD + ++ L+ G+ + R E L+ +GF+
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 468 PDLATYNSYMDGLSNARK 485
L Y+S +DGL AR+
Sbjct: 301 LGLRGYSSLIDGLFRARR 318
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 5/330 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
++ + F A R +DG M RK+ P+V ++VLI+ FVK + +A +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKI---NPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
M+ + PD +T+ LI GFC+ D A + M KGC+PN+ +FN LI G+
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
+ D+G+ + +M G +VT L+ G C G++ A EL + R V P Y
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKE 394
L++ LC G + ALE+ +++ K + +I G+ K +A L + +
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 395 GILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEG 454
G+ P T+N ++ LC G +A+ L G PDG TY+IL+ + + +
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 455 ENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ E+ GF D +T +D LS+ R
Sbjct: 598 VKLIEELKRCGFSVDASTIKMVIDMLSDGR 627
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 149/303 (49%), Gaps = 3/303 (0%)
Query: 189 SVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLF 248
++ YN+LI GF +D M++ ++ P+VVTF++LI F + K A L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 249 REMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNE 308
+EM +G P+ +++ +LI GF E D+ M M+ GC+ + T IL++G C
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 309 GRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIAC 368
R+ EL S RGV+ Y L++ C G +A E+ E+ + P+++
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 369 TTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAST 428
L++GL + +A + EK+ K + D +N ++ +C+ + DA L
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 429 KGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD---GLSNARK 485
KG+ P TY+I++ G ++ E E L +M ++G PD TYN + G +A K
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 486 SVR 488
SV+
Sbjct: 597 SVK 599
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 12/347 (3%)
Query: 142 CSNDGIFSCPEMERIFH-FAVNAFVKANRMNDGLL------AFEAMRKLIDGRP--SVSI 192
C N+ F C ER F F+ R+ GL+ A + R +I RP +V
Sbjct: 34 CPNELSFCC---ERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVID 90
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
++ L + K +++D L +M + ++ T +I+I+ FCR +K LA ++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G PN ++F+TLI G E + E + + M+E+G + +T LV+GLC G+
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLI 372
+A L+ G P Y ++ +C G +A+E++ ++ ++ + + +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+GL + A L +M +GI + +T+N L+ C+ GR D +L + ++
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
P+ +T+ +L+ + +E + +E E L EM+ G PD TY S +DG
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 157/325 (48%), Gaps = 1/325 (0%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDR 220
VN + + + +L + M + +P+ Y ++N K + A+ +M
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 221 VKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGV 280
+K D V ++I+I G C++ D A LF EM KG N++++N LI GF ++D+G
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 281 NMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKL 340
+ +MI+ + VT +L+D EG++ +A EL + RG+ P Y L++
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 341 CGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDS 400
C E + A ++VD + KG P++ LI G + + + L KM G++ D+
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 401 VTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNE 460
VT+N L++ C++G+ A L ++ + P+ +TY IL+ G ++ + +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 461 MLDEGFIPDLATYNSYMDGLSNARK 485
+ D+ YN + G+ NA K
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASK 523
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 151/292 (51%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+++IN F +CR+ A ++++ +P+ +TF+ LI+G C + AL L M E
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P++++ NTL+ G K E + + +M+E GC+ ++VT +++ +C G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL+ R + Y +++ LC G+ A + +E+ KG ++I LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + + + L+ M+K I P+ VTF+ L++ G+ +A+ L +G+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
D +TY L+ G+ +EN + +V+ M+ +G P++ T+N ++G A +
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 40/367 (10%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYD 214
+N F + ++ LAF AM K+I P+ ++ LING +AL D
Sbjct: 126 LSIMINCFCRCRKL---CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF----------- 263
RMV KPD++T N L++G C + K A+ L +M E GC PN V++
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 264 ------------------------NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
+ +I G D N+ EM G + +T
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
IL+ G CN GR +L+ D +R + P + L++ EG A E+ E+ +
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G P I T+LI+G + +A+ +++ M+ +G P+ TFN L+ C R D
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L S +G+ D +TY+ L+ G+ + + L EM+ P++ TY +DG
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 480 LSNARKS 486
L + +S
Sbjct: 483 LCDNGES 489
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%)
Query: 240 KFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCE 299
K D A+ LFR+M P V+ F+ L +++D + + +M G + T
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 300 ILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKK 359
I+++ C ++ A + + G P + L+ LC EG ALE+VD + +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 360 GNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDA 419
G+ P +I TL+ GL K EA L++KM++ G P++VT+ +L +C G+T A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 420 DRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDG 479
L + + D + Y I++ G + NL NEM +G ++ TYN + G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 480 LSNA 483
NA
Sbjct: 308 FCNA 311
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 155 RIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYD 214
R F+ +N + KANR++DGL F M L YN LI GF + + + A +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 215 RMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGER 274
MV +V P++VT+ IL+ G C N + + AL +F ++ + ++ +N +I G
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 275 KFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYF 334
K D+ ++ + G + T I++ GLC +G + +A L G P + Y
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 335 GLVEKLCGEGNAGIALEVVDELWKKG 360
L+ G+G+A ++++++EL + G
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCG 608
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 155/331 (46%), Gaps = 5/331 (1%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I+ + F A R +DG M RK+ P V ++ LI+ FVK + +A +
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT---PDVVAFSALIDCFVKEGKLREAEELH 340
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
M++ + PD VT+ LI GFC+ + D A + M KGC PN+ +FN LI G+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
D+G+ + +M G +VT L+ G C G++ A EL + R V P Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
L++ LC G ALE+ +++ K + +I G+ K +A L +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+G+ PD T+N ++ LC G +AD L G P+G TY+IL+ + E +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNAR 484
L+ E+ GF D +T +D LS+ R
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 150/307 (48%), Gaps = 2/307 (0%)
Query: 175 LAFEAMRKLID--GRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LAF AM K+I P ++ LING +AL DRMV KP ++T N L+
Sbjct: 125 LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV 184
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
+G C N K A+ L M E G PN V++ +++ + + + +M E +
Sbjct: 185 NGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+V I++DGLC +G + A L + +G Y L+ C G ++
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
+ ++ K+ P V+A + LI+ + K EA L ++M++ GI PD+VT+ L++ C
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
+ A+ + L +KG P+ T++IL++GY + N +G L +M G + D T
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 473 YNSYMDG 479
YN+ + G
Sbjct: 425 YNTLIQG 431
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 159/336 (47%), Gaps = 6/336 (1%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDR 215
+ ++ K +++ F M I G + + IY LI GF +D
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEME--IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 216 MVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERK 275
M++ ++ PDVV F+ LI F + K A L +EM ++G +P+ V++ +LI GF E +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 276 FDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFG 335
D+ +M M+ GC + T IL++G C + EL S RGV+ Y
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 336 LVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEG 395
L++ C G +A E+ E+ + P +++ L++GL + +A + EK+ K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 396 ILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGE 455
+ D +N ++ +C+ + DA L KG+ PD TY+I++ G ++ E +
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 456 NLVNEMLDEGFIPDLATYNSYMD---GLSNARKSVR 488
L +M ++G P+ TYN + G +A KS +
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
+++IN +CR+ A ++++ +PD VTF+ LI+G C + AL L M E
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
G P +++ N L+ G K + V + M+E G + + VT ++ +C G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIE 373
A EL+ R + Y +++ LC +G+ A + +E+ KG +I TTLI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 374 GLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDP 433
G + + + L+ M+K I PD V F+ L++ G+ +A+ L +G+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 434 DGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNA 483
D +TY L+ G+ +EN+ + ++++ M+ +G P++ T+N ++G A
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 175 LAFEAMRKLIDGRPSVSI--YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILI 232
LA E +RK+ + + + Y+++I+G K D A ++ M K D++ + LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 233 SGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCE 292
GFC ++D L R+M ++ P+VV+F+ LI F E K E + EMI+ G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 293 FSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEV 352
+VT L+DG C E ++ KA ++ +G P + L+ C LE+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 353 VDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCD 412
++ +G + + TLI+G L K A L ++M+ + PD V++ LL+ LCD
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 413 VGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLAT 472
G A + ++ D Y+I++ G ++ + +L + +G PD+ T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 473 YNSYMDGL 480
YN + GL
Sbjct: 530 YNIMIGGL 537
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 1/326 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
F +N R+++ L + M ++ +P++ N L+NG + A+ DRM
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEM-GHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
V +P+ VT+ ++ C++ + LA+ L R+M E+ + V ++ +I G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D N+ EM G + + L+ G C GR +L+ D +R + P + L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
++ EG A E+ E+ ++G P + T+LI+G + + +A+ +++ M+ +G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
P+ TFN L+ C D L S +G+ D +TY+ L+ G+ + + +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 457 LVNEMLDEGFIPDLATYNSYMDGLSN 482
L EM+ PD+ +Y +DGL +
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCD 469
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
DG+ VS L +G V +E D A+ + M R R +P ++ F+ L S R K++DL
Sbjct: 33 DGKGKVSYRERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLV 91
Query: 245 LGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDG 304
L L ++M KG N+ + + +I RK + ++I+LG E +VT L++G
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 305 LCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPS 364
LC EGRV +A ELV G P LV LC G A+ ++D + + G P+
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 365 VIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRL 424
+ +++ + + + A L+ KM + I D+V ++ +++ LC G +A L
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 425 LASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
KG D + Y L+ G+ R +G L+ +M+ PD+ +++ +D
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T+ ++ + + + +L+ + + C P + R F+ +N + KA
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG---------PNI-RTFNILINGYCKA 400
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
N ++DGL F M L YN LI GF + + + A + MV RV+PD+V+
Sbjct: 401 NLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
+ IL+ G C N + + AL +F ++ + ++ +N +I G K D+ ++ +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAG 347
G + T I++ GLC +G + +A L G P Y L+ GEG+A
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 348 IALEVVDELWKKG 360
+ ++++E+ + G
Sbjct: 580 KSAKLIEEIKRCG 592
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
+ IYN++I+G + D A + + VKPDV T+NI+I G C+ A LFR
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
+M E G +PN ++N LIR GE + + E+ G + T +++VD L ++G
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDG 610
Query: 310 RVLKA 314
R+ K+
Sbjct: 611 RLKKS 615
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 200/474 (42%), Gaps = 53/474 (11%)
Query: 20 PPPAPSIPLPSRPETPPVTLPSVTLTPTAHHTHLLRFLKTHLLTPT----------NNQI 69
PPPA S + + P T T L KT TP N+
Sbjct: 20 PPPADSAAIAKLILSSPNT--------THQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGP 71
Query: 70 TPSSLLHFLKSKLHHHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELH 129
HFL + HH ++ H D F A I + H H T ++ + S
Sbjct: 72 KALQFFHFLDN---HHREYVH-DASSFDLAIDIAARLHLHPTVWSLIHRMRS-------- 119
Query: 130 SVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPS 189
+ P P + F + A + + + F M +
Sbjct: 120 -----LRIGPSP-------------KTFAIVAERYASAGKPDKAVKLFLNMHEH-GCFQD 160
Query: 190 VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFR 249
++ +N +++ K + +KA + R +R R D VT+N++++G+C K+ AL + +
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 250 EMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEG 309
EM E+G NPN+ ++NT+++GFF + EM + CE VT +V G G
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 310 RVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACT 369
+ +A + + R GVLP Y +++ LC + N A+ + +E+ ++G P+V
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 370 TLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTK 429
LI GL + LM++M EG P+ T+N ++ + A L +
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 430 GLDPDGMTYHILVSGYTRENRRKE---GENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+SG R ++ L+ EM++ GFIP T+N ++GL
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGL 453
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 116/277 (41%), Gaps = 39/277 (14%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ + F +A ++ F M+K D V Y +++GF E +A +D M
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+R+ V P V T+N +I C+ + A+ +F EM +G PNV ++N LIRG F +F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
G + M GCE + T +++ V KA GL
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA-------------------LGL 392
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL---RRLRKGVEASGLMEKMLK 393
EK+ G G+ LP++ LI G+ +R V A L+ +M++
Sbjct: 393 FEKM-GSGDC---------------LPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVE 436
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKG 430
G +P TFN +L L G A + L S G
Sbjct: 437 RGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 174/367 (47%), Gaps = 40/367 (10%)
Query: 156 IFHFAVNAFVKANRMNDGLLAFEAM--RKLIDGRPSVSIYNVLINGFVKCREFDKALGFY 213
I++ ++ K RMND F+ M R+L+ PS+ YN LI+G+ K +K+
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLL---PSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 214 DRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGE 273
+RM D ++P ++TFN L+ G + + A + +EM++ G P+ +F+ L G+
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELV--------------- 318
K + + + ++ G + ++ TC IL++ LC EG++ KA E++
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 319 ---ID-----------------FSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWK 358
ID ++G+ P Y L+ + C G A + V+++
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 359 KGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVD 418
KG PSV LI G R + + ++++M G +P+ V++ L+ LC + ++
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 419 ADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMD 478
A ++ +G+ P Y++L+ G + + ++ EML +G +L TYN+ +D
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 479 GLSNARK 485
GLS K
Sbjct: 573 GLSMTGK 579
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 35/336 (10%)
Query: 185 DGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLA 244
D RPS +Y I VK + K L ++RM DR+ P V +N+LI G C+ K+ + A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 245 LGLFREM-------------------------------REK----GCNPNVVSFNTLIRG 269
LF EM RE+ P++++FNTL++G
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 270 FFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPK 329
F ++ N+ EM +LG + T IL DG + + A + GV
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 330 DFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLME 389
+ L+ LC EG A E++ KG +P+ + T+I+G R V A +E
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 390 KMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTREN 449
M K+G+ PD + +NCL+ C++G +A++ KG+ P TY+IL+ GY R+
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473
Query: 450 RRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
+ +++ EM D G +P++ +Y + ++ L K
Sbjct: 474 EFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 31/336 (9%)
Query: 182 KLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKF 241
KL PSV YN+LI G+ + EFDK M + P+VV++ LI+ C+ K
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 242 DLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEIL 301
A + R+M ++G +P V +N LI G + K ++ + EM++ G E + VT L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 302 VDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN 361
+DGL G++ +A +L+++ SR+G+ P F Y L+ GN + + +E+ + G
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 362 LPSVIACTTLI-----EGLRRLRK---------------GV-----------EASGLMEK 390
P++ LI EG+ + GV +A L ++
Sbjct: 631 KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 391 MLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENR 450
M+++ I D T+N L+ VG+ + L + + ++P+ TY+I+V G+
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 451 RKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
EM ++GF+ D+ N + GL +S
Sbjct: 751 YMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 154/320 (48%), Gaps = 11/320 (3%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
+NA K ++ +L E + L+ P+ IYN +I+G+ + + A + M +
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLV---PNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+KPD + +N LI FC + + A +M+ KG +P+V ++N LI G+ + +FD+
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 279 GVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVE 338
++ EM + G + V+ L++ LC ++L+A + D RGV PK Y L++
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 339 KLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILP 398
C +G A E+ KKG +++ TLI+GL K EA L+ ++ ++G+ P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 399 DSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLV 458
D T+N L+ G L G+ P TYH+L+S T KEG L
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT-----KEGIELT 652
Query: 459 NEMLDE-GFIPDLATYNSYM 477
+ E PDL YN +
Sbjct: 653 ERLFGEMSLKPDLLVYNGVL 672
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 2/282 (0%)
Query: 194 NVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMRE 253
++L+N K + +KA R + + P+ V +N +I G+CR A M +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 254 KGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLK 313
+G P+ +++N LIR F + + +M G S T IL+ G + K
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 314 ACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVD-ELWKKGNLPSVIACTTLI 372
+++ + G +P Y L+ LC +G+ + ++V ++ +G P V LI
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLC-KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 373 EGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLD 432
+G K +A ++MLK+GI + VT+N L++ L G+ +A+ L L S KGL
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 433 PDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYN 474
PD TY+ L+SGY + L EM G P L TY+
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%)
Query: 274 RKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDY 333
+ E ++ + + G SS + +L+D L + + ++ P F Y
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 334 FGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLK 393
++ + G LE+ + + PSV LI+GL + ++ +A L ++ML
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 394 EGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKE 453
+LP +T+N L++ C G + ++R ++P +T++ L+ G + ++
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 454 GENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
EN++ EM D GF+PD T++ DG S+ K+
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 176 AFEAMRKLIDGRPSV--SIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILIS 233
AF +++I+ + + YN LI G +K + + D M ++P+ T+NI++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 234 GFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEM 286
G C K + A +REM+EKG +V N L+ G E + E + EM
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 187 RPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALG 246
+P + +YN +++ + + +KA +M+ + D T+N LI G + K
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 247 LFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLC 306
L EM + P ++N +++G + + EM E G LV GL
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLK 781
Query: 307 NEGRVLKACELVI 319
E R K E+VI
Sbjct: 782 EEWRS-KEAEIVI 793
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 151/324 (46%), Gaps = 1/324 (0%)
Query: 157 FHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRM 216
++ ++ ++NR+ G L MRK + P+ YN LINGF + A + M
Sbjct: 266 YNMLIHDLCRSNRIAKGYLLLRDMRKRMI-HPNEVTYNTLINGFSNEGKVLIASQLLNEM 324
Query: 217 VRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKF 276
+ + P+ VTFN LI G F AL +F M KG P+ VS+ L+ G +F
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 277 DEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGL 336
D M G +T ++DGLC G + +A L+ + S+ G+ P Y L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 337 VEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGI 396
+ C G A E+V +++ G P+ I +TLI R+ EA + E M+ EG
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504
Query: 397 LPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGEN 456
D TFN L+ LC G+ +A+ ++ G+ P+ +++ L++GY + +
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 457 LVNEMLDEGFIPDLATYNSYMDGL 480
+ +EM G P TY S + GL
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGL 588
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 6/318 (1%)
Query: 177 FEAMRKLIDGRPS------VSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNI 230
F+A +L+D S V YN+LI+ + K M + + P+ VT+N
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 231 LISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELG 290
LI+GF K +A L EM G +PN V+FN LI G E F E + M Y M G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 291 CEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIAL 350
S V+ +L+DGLC A + R GV Y G+++ LC G A+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 351 EVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDL 410
+++E+ K G P ++ + LI G ++ + A ++ ++ + G+ P+ + ++ L+ +
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 411 CDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDL 470
C +G +A R+ +G D T+++LV+ + + E E + M +G +P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 471 ATYNSYMDGLSNARKSVR 488
+++ ++G N+ + ++
Sbjct: 544 VSFDCLINGYGNSGEGLK 561
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 11/344 (3%)
Query: 146 GIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLID---------GRPSVSIYNVL 196
GI+ +M+ + H V N M DG + K D G P+++ YN+L
Sbjct: 703 GIYFREQMDNLGH--TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 197 INGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGC 256
++G+ K ++ + Y ++ + + PD +T + L+ G C + ++ L + + +G
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 257 NPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACE 316
+ +FN LI + + ++ M LG TC+ +V L R ++
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 880
Query: 317 LVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLR 376
++ + S++G+ P+ Y GL+ LC G+ A V +E+ P +A + ++ L
Sbjct: 881 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 940
Query: 377 RLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGM 436
+ K EA+ L+ MLK ++P +F L+ C G ++A LR++ S GL D +
Sbjct: 941 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1000
Query: 437 TYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
+Y++L++G + L EM +GF+ + TY + + GL
Sbjct: 1001 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 142/333 (42%), Gaps = 35/333 (10%)
Query: 188 PSVSIYNVLIN-----------------------------------GFVKCREFDKALGF 212
P V+ +N+LIN + K F A+
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 213 YDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFG 272
D M V DV T+N+LI CR+ + L R+MR++ +PN V++NTLI GF
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 273 ERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFD 332
E K + EM+ G + VT L+DG +EG +A ++ +G+ P +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 333 YFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKML 392
Y L++ LC +A + + G I T +I+GL + EA L+ +M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 393 KEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVSGYTRENRRK 452
K+GI PD VT++ L+ C VGR A + GL P+G+ Y L+ R K
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 453 EGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
E + M+ EG D T+N + L A K
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
PS Y VL++G K EFD A GFY RM R+ V +T+ +I G C+N D A+ L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + G +P++V+++ LI GF +F + + +G + + L+ C
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + G F + LV LC G A E + + G LP+ ++
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
LI G +G++A + ++M K G P T+ LL+ LC G +A++
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKSV 487
D + Y+ L++ + + +L EM+ +PD TY S + GL K+V
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 165/431 (38%), Gaps = 88/431 (20%)
Query: 84 HHPQFTHYDFHIFAWASTIDSFRHDHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCS 143
H Q HI A D RH + S SS+ F L + ++NP
Sbjct: 70 HIVQLVCITTHILVRARMYDPARHILKELSLM--SGKSSFVFGALMTTYRLCNSNP---- 123
Query: 144 NDGIFSCPEMERIFHFAVNAFVKANRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKC 203
++ + +++ + D L F M L PSV N ++ VK
Sbjct: 124 -----------SVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKS 171
Query: 204 REFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSF 263
E F M++ ++ PDV TFNILI+ C F+ + L ++M + G P +V++
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 264 NTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSR 323
NT++ + + +F + + M G + T +L+ LC R+ K L+ D +
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 324 RGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVE 383
R + P + Y TLI G K +
Sbjct: 292 RMIHPNEVTY-----------------------------------NTLINGFSNEGKVLI 316
Query: 384 ASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDGMTYHILVS 443
AS L+ +ML G+ P+ VTFN L++ G +A ++ + KGL P ++Y +L+
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 444 G-------------YTRENRR----------------------KEGENLVNEMLDEGFIP 468
G Y R R E L+NEM +G P
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 469 DLATYNSYMDG 479
D+ TY++ ++G
Sbjct: 437 DIVTYSALING 447
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 161 VNAFVKANRMNDGLLAFEAMRKLIDG-RPSVSIYNVLINGFVKCREFDKALGFYDRMVRD 219
++ K +++ ++ M K DG P + Y+ LINGF K F A R+ R
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSK--DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467
Query: 220 RVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEG 279
+ P+ + ++ LI CR A+ ++ M +G + +FN L+ K E
Sbjct: 468 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527
Query: 280 VNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKACELVIDFSRRGVLPKDFDYFGLVEK 339
M G ++V+ + L++G N G LKA + + ++ G P F Y L++
Sbjct: 528 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587
Query: 340 LCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGLRRLRKGVEASGLMEKMLKEGILPD 399
LC G+ A + + L + TL+ + + +A L +M++ ILPD
Sbjct: 588 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 400 SVTFNCLLEDLCDVGRTVDADRLRLLASTKG-LDPDGMTYHILVSGYTRENRRKEGENLV 458
S T+ L+ LC G+TV A A +G + P+ + Y V G + + K G
Sbjct: 648 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707
Query: 459 NEMLDEGFIPDLATYNSYMDGLSNARK 485
+M + G PD+ T N+ +DG S K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 2/304 (0%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ IY+ LI + +A+ Y+ M+ + D TFN+L++ C+ K A
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
R M G PN VSF+ LI G+ + + ++ EM ++G + T L+ GLC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
G + +A + + Y L+ +C GN A+ + E+ ++ LP
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEG-ILPDSVTFNCLLEDLCDVGRTVDADRLRLLA 426
T+LI GL R K V A ++ G +LP+ V + C ++ + G+ R
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 427 STKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARKS 486
G PD +T + ++ GY+R + ++ +L+ EM ++ P+L TYN + G S RK
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK-RKD 769
Query: 487 VRQT 490
V +
Sbjct: 770 VSTS 773
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 193 YNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGLFREMR 252
+NVL+ K + +A F M D + P+ V+F+ LI+G+ + + A +F EM
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 253 EKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVL 312
+ G +P ++ +L++G E + + +V L+ +C G +
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 313 KACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGN-LPSVIACTTL 371
KA L + +R +LP + Y L+ LC +G IA+ E +GN LP+ + T
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 372 IEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGL 431
++G+ + + E+M G PD VT N +++ +G+ + L +
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 432 DPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGL 480
P+ TY+IL+ GY++ L ++ G +PD T +S + G+
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%)
Query: 188 PSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVTFNILISGFCRNKKFDLALGL 247
P+ +Y ++G K ++ + F ++M PD+VT N +I G+ R K + L
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 248 FREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCN 307
EM + PN+ ++N L+ G+ + + +I G +TC LV G+C
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 801
Query: 308 EGRVLKACELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIA 367
+ +++ F RGV + + L+ K C G A ++V + G
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Query: 368 CTTLIEGLRRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLAS 427
C ++ L R + E+ ++ +M K+GI P+S + L+ LC VG A ++
Sbjct: 862 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
Query: 428 TKGLDPDGMTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYM 477
+ P + +V + + E L+ ML +P +A++ + M
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 256 CNPNVVSFNTLIRGFFGERKFDEGVNMAYEMIELGCEFSSVTCEILVDGLCNEGRVLKAC 315
CN N ++ LIR + E + + + M G S TC ++ + G +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 316 ELVIDFSRRGVLPKDFDYFGLVEKLCGEGNAGIALEVVDELWKKGNLPSVIACTTLIEGL 375
+ + +R + P + L+ LC EG+
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFE---------------------------- 210
Query: 376 RRLRKGVEASGLMEKMLKEGILPDSVTFNCLLEDLCDVGRTVDADRLRLLASTKGLDPDG 435
++S LM+KM K G P VT+N +L C GR A L +KG+D D
Sbjct: 211 -------KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 436 MTYHILVSGYTRENRRKEGENLVNEMLDEGFIPDLATYNSYMDGLSNARK 485
TY++L+ R NR +G L+ +M P+ TYN+ ++G SN K
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 161 VNAFVKANRMNDG--LLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVR 218
V A K + ++ LL F KL+ P+++ + L++ K +AL M
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLV---PTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 219 DRVKPDVVTFNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDE 278
+K D+V++N+LI+G C LA L+ EM+ G N ++ LIRG
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1052
Query: 279 GVNM 282
G ++
Sbjct: 1053 GADI 1056
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 12/221 (5%)
Query: 108 DHTTFLFIVRSLASSYRFSELHSVLNFISANPCPCSNDGIFSCPEMERIFHFAVNAFVKA 167
D T +V L ++RF E VL+ S GI PE R + +N +
Sbjct: 858 DKDTCDAMVSVLNRNHRFQESRMVLH-------EMSKQGI--SPE-SRKYIGLINGLCRV 907
Query: 168 NRMNDGLLAFEAMRKLIDGRPSVSIYNVLINGFVKCREFDKALGFYDRMVRDRVKPDVVT 227
+ + E M P+V+ + ++ KC + D+A M++ ++ P + +
Sbjct: 908 GDIKTAFVVKEEMIAHKICPPNVA-ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIAS 966
Query: 228 FNILISGFCRNKKFDLALGLFREMREKGCNPNVVSFNTLIRGFFGERKFDEGVNMAYEMI 287
F L+ C+N AL L M G ++VS+N LI G + + EM
Sbjct: 967 FTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1026
Query: 288 ELGCEFSSVTCEILVDGLCNEGRVLKACELVI-DFSRRGVL 327
G ++ T + L+ GL ++++ D RG +
Sbjct: 1027 GDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,089,521
Number of Sequences: 539616
Number of extensions: 8847185
Number of successful extensions: 55588
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 43551
Number of HSP's gapped (non-prelim): 6650
length of query: 491
length of database: 191,569,459
effective HSP length: 122
effective length of query: 369
effective length of database: 125,736,307
effective search space: 46396697283
effective search space used: 46396697283
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)