Query 011203
Match_columns 491
No_of_seqs 211 out of 2298
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 22:44:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011203.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011203hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2737 Putative metallopeptid 100.0 3.5E-90 7.6E-95 657.1 34.3 480 3-488 3-488 (492)
2 PRK10879 proline aminopeptidas 100.0 1.1E-77 2.4E-82 622.7 47.3 420 12-478 1-434 (438)
3 KOG2414 Putative Xaa-Pro amino 100.0 1.7E-72 3.8E-77 541.8 32.3 422 4-479 54-487 (488)
4 PRK13607 proline dipeptidase; 100.0 2.9E-71 6.3E-76 573.1 43.5 426 13-464 4-438 (443)
5 COG0006 PepP Xaa-Pro aminopept 100.0 1.8E-60 3.9E-65 489.5 33.4 367 10-472 3-383 (384)
6 TIGR02993 ectoine_eutD ectoine 100.0 1.4E-60 3E-65 490.0 31.8 369 10-470 4-388 (391)
7 PRK09795 aminopeptidase; Provi 100.0 3.4E-60 7.3E-65 483.3 33.4 345 19-470 2-356 (361)
8 PRK14575 putative peptidase; P 100.0 2.4E-56 5.1E-61 460.1 34.9 357 20-470 12-403 (406)
9 PRK14576 putative endopeptidas 100.0 2.7E-55 5.9E-60 452.1 36.4 240 167-470 161-402 (405)
10 PRK15173 peptidase; Provisiona 100.0 4.8E-51 1E-55 408.0 29.2 240 167-470 79-320 (323)
11 PRK12897 methionine aminopepti 100.0 6.1E-49 1.3E-53 380.1 27.5 241 182-465 3-248 (248)
12 PRK07281 methionine aminopepti 100.0 2.8E-48 6E-53 379.3 27.7 246 181-468 2-283 (286)
13 PRK12318 methionine aminopepti 100.0 1.9E-47 4.1E-52 375.8 27.4 251 174-467 33-291 (291)
14 cd01087 Prolidase Prolidase. E 100.0 2.7E-47 5.9E-52 368.0 27.8 243 189-464 1-243 (243)
15 TIGR00500 met_pdase_I methioni 100.0 8.4E-47 1.8E-51 365.5 27.8 240 182-464 2-246 (247)
16 PLN03158 methionine aminopepti 100.0 8.3E-47 1.8E-51 382.3 26.5 253 176-470 130-387 (396)
17 PRK05716 methionine aminopepti 100.0 2E-46 4.3E-51 364.0 28.0 245 181-468 3-252 (252)
18 cd01090 Creatinase Creatine am 100.0 1.7E-46 3.7E-51 357.7 25.8 222 189-464 1-228 (228)
19 PRK12896 methionine aminopepti 100.0 1.9E-45 4.2E-50 357.8 27.1 243 180-464 7-254 (255)
20 cd01091 CDC68-like Related to 100.0 1.1E-43 2.4E-48 340.5 23.0 225 189-464 1-243 (243)
21 cd01086 MetAP1 Methionine Amin 100.0 2.4E-42 5.1E-47 332.6 26.6 233 189-464 1-238 (238)
22 cd01092 APP-like Similar to Pr 100.0 3.5E-42 7.6E-47 324.5 25.6 208 189-459 1-208 (208)
23 cd01085 APP X-Prolyl Aminopept 100.0 4.1E-41 9E-46 319.2 24.6 210 190-462 5-222 (224)
24 PF00557 Peptidase_M24: Metall 100.0 3.4E-40 7.3E-45 310.9 21.4 206 190-456 1-207 (207)
25 cd01066 APP_MetAP A family inc 100.0 6.1E-38 1.3E-42 294.4 24.8 207 189-459 1-207 (207)
26 cd01089 PA2G4-like Related to 100.0 7.4E-38 1.6E-42 298.9 24.1 214 189-464 1-228 (228)
27 KOG2738 Putative methionine am 100.0 4E-36 8.6E-41 279.1 22.0 245 181-467 114-363 (369)
28 COG0024 Map Methionine aminope 100.0 1E-34 2.2E-39 273.9 27.4 243 182-466 4-253 (255)
29 KOG1189 Global transcriptional 100.0 9.4E-36 2E-40 305.0 16.5 357 57-477 8-390 (960)
30 PRK08671 methionine aminopepti 100.0 4.1E-32 8.9E-37 267.7 26.6 188 188-413 1-189 (291)
31 PTZ00053 methionine aminopepti 100.0 1.6E-31 3.5E-36 272.8 27.9 201 181-413 150-360 (470)
32 TIGR00495 crvDNA_42K 42K curve 100.0 5E-31 1.1E-35 268.0 28.3 210 181-416 11-235 (389)
33 cd01088 MetAP2 Methionine Amin 100.0 6.7E-31 1.5E-35 259.1 25.0 186 189-412 1-187 (291)
34 TIGR00501 met_pdase_II methion 100.0 3.1E-30 6.7E-35 254.5 24.0 189 186-412 2-191 (295)
35 COG5406 Nucleosome binding fac 100.0 5.1E-29 1.1E-33 250.8 19.2 398 10-482 4-435 (1001)
36 KOG2413 Xaa-Pro aminopeptidase 100.0 3.1E-28 6.8E-33 247.4 22.6 360 12-469 169-556 (606)
37 PF05195 AMP_N: Aminopeptidase 99.8 3.1E-20 6.8E-25 161.6 7.8 117 12-138 1-118 (134)
38 KOG2776 Metallopeptidase [Gene 99.3 1E-10 2.2E-15 113.0 15.3 150 183-336 15-179 (398)
39 KOG2775 Metallopeptidase [Gene 99.1 1.1E-09 2.3E-14 103.3 14.5 198 186-410 82-284 (397)
40 PF01321 Creatinase_N: Creatin 98.5 3.8E-08 8.2E-13 85.2 1.1 122 20-183 1-132 (132)
41 PF14826 FACT-Spt16_Nlob: FACT 98.1 4.3E-06 9.4E-11 75.1 4.5 78 12-98 1-79 (163)
42 PLN03158 methionine aminopepti 96.8 0.011 2.4E-07 60.8 11.0 120 280-456 126-247 (396)
43 cd01086 MetAP1 Methionine Amin 96.5 0.027 5.8E-07 54.0 11.1 43 297-343 2-44 (238)
44 KOG2738 Putative methionine am 96.4 0.018 3.9E-07 55.4 8.6 87 298-414 124-211 (369)
45 TIGR00501 met_pdase_II methion 96.0 0.21 4.6E-06 49.5 14.8 96 192-290 106-206 (295)
46 COG0024 Map Methionine aminope 95.8 0.058 1.3E-06 51.8 9.5 89 298-414 13-101 (255)
47 cd01088 MetAP2 Methionine Amin 95.7 0.089 1.9E-06 52.1 10.7 40 297-336 2-41 (291)
48 PRK05716 methionine aminopepti 95.2 0.17 3.8E-06 48.8 10.6 38 298-335 13-50 (252)
49 PRK12896 methionine aminopepti 95.1 0.16 3.4E-06 49.2 10.0 49 286-335 5-55 (255)
50 TIGR00495 crvDNA_42K 42K curve 94.8 0.28 6.1E-06 50.6 11.3 40 298-337 21-60 (389)
51 cd01066 APP_MetAP A family inc 94.4 0.58 1.3E-05 43.0 11.6 99 190-291 102-202 (207)
52 PTZ00053 methionine aminopepti 92.8 1.3 2.8E-05 46.5 11.9 88 299-414 161-248 (470)
53 cd01089 PA2G4-like Related to 92.7 1.3 2.9E-05 42.0 11.0 40 298-337 3-42 (228)
54 cd01092 APP-like Similar to Pr 91.8 2.4 5.3E-05 39.2 11.6 98 191-291 104-203 (208)
55 TIGR00500 met_pdase_I methioni 91.5 2.4 5.2E-05 40.7 11.5 95 192-291 118-236 (247)
56 cd01091 CDC68-like Related to 90.2 2.9 6.3E-05 40.2 10.6 99 191-291 120-232 (243)
57 PRK08671 methionine aminopepti 90.1 4.7 0.0001 39.9 12.3 97 192-291 103-204 (291)
58 TIGR02993 ectoine_eutD ectoine 89.8 3.5 7.6E-05 42.7 11.5 98 191-291 271-372 (391)
59 cd01090 Creatinase Creatine am 89.8 4.9 0.00011 38.2 11.7 96 192-291 111-218 (228)
60 PRK12897 methionine aminopepti 89.2 4.4 9.6E-05 39.0 11.1 96 192-291 119-237 (248)
61 PRK12318 methionine aminopepti 88.5 4.6 9.9E-05 40.0 10.8 82 191-278 159-246 (291)
62 KOG2776 Metallopeptidase [Gene 88.5 2.7 5.9E-05 41.9 8.8 117 298-464 23-140 (398)
63 PF00557 Peptidase_M24: Metall 87.6 8.5 0.00018 35.6 11.6 96 192-291 104-205 (207)
64 cd01087 Prolidase Prolidase. E 86.9 7.4 0.00016 37.2 11.0 39 297-335 2-40 (243)
65 KOG2775 Metallopeptidase [Gene 86.2 5.1 0.00011 39.0 9.0 90 297-415 86-176 (397)
66 PRK07281 methionine aminopepti 84.6 11 0.00025 37.1 11.2 82 192-278 150-237 (286)
67 PRK14576 putative endopeptidas 83.3 13 0.00027 38.8 11.5 99 191-291 285-386 (405)
68 PRK09795 aminopeptidase; Provi 82.3 17 0.00037 37.0 11.9 103 186-291 236-340 (361)
69 PRK15173 peptidase; Provisiona 81.8 16 0.00034 36.8 11.1 99 191-291 203-304 (323)
70 PRK14575 putative peptidase; P 81.4 16 0.00035 38.0 11.4 99 191-291 286-387 (406)
71 cd01085 APP X-Prolyl Aminopept 80.9 10 0.00022 35.9 9.0 39 297-335 4-44 (224)
72 COG0006 PepP Xaa-Pro aminopept 78.8 20 0.00044 36.8 11.1 98 192-291 264-365 (384)
73 PRK10879 proline aminopeptidas 72.2 33 0.00072 36.0 10.8 37 298-334 181-217 (438)
74 PF07305 DUF1454: Protein of u 57.8 60 0.0013 29.6 7.8 40 296-335 114-153 (200)
75 PRK13607 proline dipeptidase; 37.7 1.6E+02 0.0035 31.0 8.8 35 193-227 271-305 (443)
76 COG5406 Nucleosome binding fac 31.5 1.6E+02 0.0035 32.1 7.2 70 201-275 309-384 (1001)
77 KOG1189 Global transcriptional 30.2 2.5E+02 0.0054 31.4 8.5 100 183-291 253-366 (960)
78 KOG2413 Xaa-Pro aminopeptidase 28.2 64 0.0014 34.8 3.8 62 20-97 11-74 (606)
79 PF09851 SHOCT: Short C-termin 24.5 60 0.0013 20.2 1.8 15 11-25 16-30 (31)
80 PF05184 SapB_1: Saposin-like 21.9 2E+02 0.0044 18.3 4.1 33 195-227 3-35 (39)
No 1
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=3.5e-90 Score=657.05 Aligned_cols=480 Identities=65% Similarity=1.092 Sum_probs=448.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhhhhhcc--CCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEE
Q 011203 3 SSSSLSPPKVPKELYFINREKVLNSLRQHLTE--TSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFY 80 (491)
Q Consensus 3 ~~~~~~~~~~~~~~~~~R~~rl~~~~~~~~~~--~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~ 80 (491)
.-.++..-.+|.+.|..+|+|+.++++..... .++++..+|++.||++..++++|..+.|||++.|+||+|.+.|+++
T Consensus 3 ~~~~~~~~~vP~~lf~~nr~rl~~~lr~k~~~~nr~~~~~s~vllqgGeE~nrYctD~~~lFrQesYF~~lfGV~ep~~y 82 (492)
T KOG2737|consen 3 ALSGPSFWLVPMELFAGNRKRLLEALRKKLLSSNRSLDGGSFVLLQGGEEKNRYCTDTTELFRQESYFAYLFGVREPGFY 82 (492)
T ss_pred cccCCccceecHHHhhcchHHHHHHHHhhcccccccccCceEEEEecchhhcccccchHHHHhhhhHHHHhhcCCCccce
Confidence 33344444499999999999999999886432 2344456999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCC
Q 011203 81 GAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSK 160 (491)
Q Consensus 81 lvi~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~ 160 (491)
.+|....|+.+||+|+++.....|.|.+.+.+.+++.+.+|++.+.+++..++... +.+.++.+.|+++|.+.+..
T Consensus 83 g~idv~tgKstLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~~~~~----~~k~l~~l~g~nTDsg~v~~ 158 (492)
T KOG2737|consen 83 GAIDVGTGKSTLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQVLKGS----KPKLLYLLRGLNTDSGNVLK 158 (492)
T ss_pred EEEEecCCceEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHHhhcc----CccceeeeeccccCcccccC
Confidence 99988899999999999999999999999999999999999999999999988655 56788888999999888766
Q ss_pred ccccc----ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC
Q 011203 161 PAQFE----FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC 236 (491)
Q Consensus 161 ~~~~~----~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~ 236 (491)
++.|. +..+..-+.+++.+.|.|||+.||+.||.|++|++.++.++|.+++||+.|.++.+.+.......|||+..
T Consensus 159 e~~f~g~~kf~~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh~ 238 (492)
T KOG2737|consen 159 EASFAGISKFETDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRHL 238 (492)
T ss_pred cccccchhhcccCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCcccc
Confidence 66554 45555667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHH
Q 011203 237 SYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINA 316 (491)
Q Consensus 237 ~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~ 316 (491)
+|.+||+||.|++++||.+.+.|+++.||.||+.++|+|+.|++|.+|||++|+++|++|.+|+.+|++++.++.+++++
T Consensus 239 sYtcIc~sG~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a 318 (492)
T KOG2737|consen 239 SYTCICASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEA 318 (492)
T ss_pred ccceeeecCCCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCC
Q 011203 317 MKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRT 396 (491)
Q Consensus 317 lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~ 396 (491)
+|||+.+.|+|..+.+++-++|++.|+++++++++++++.+..|+||++||.+||++||+++||++.++|..|++.+++.
T Consensus 319 ~KpGv~W~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~ 398 (492)
T KOG2737|consen 319 MKPGVWWVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRT 398 (492)
T ss_pred cCCCCccccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHHHHHHH
Q 011203 397 VRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIM 476 (491)
Q Consensus 397 ~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~ie~~~ 476 (491)
.+.|++|||+|+|||+||+..|+++..+||+...++|.+.++.|.++|||||||+|+||++|+|+||.+|+..++||+.|
T Consensus 399 aR~L~e~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~vprtveeIEa~m 478 (492)
T KOG2737|consen 399 ARHLKEGMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTCVPRTVEEIEACM 478 (492)
T ss_pred hhhhhcCcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCC
Q 011203 477 AGAPWPSNKTAP 488 (491)
Q Consensus 477 ~~~~~~~~~~~~ 488 (491)
+.-+++ |++-
T Consensus 479 a~g~~~--p~~~ 488 (492)
T KOG2737|consen 479 AGGDKA--PTKF 488 (492)
T ss_pred hcCCCC--Cccc
Confidence 999998 5443
No 2
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.1e-77 Score=622.69 Aligned_cols=420 Identities=33% Similarity=0.529 Sum_probs=360.8
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCC---C
Q 011203 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIAT---G 88 (491)
Q Consensus 12 ~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~---g 88 (491)
++.++|.+||++|.+.|.+ ++++|+.|++...++ .|..|+|+|++||+||||+++|++++++.+.. .
T Consensus 1 ~~~~~~~~rR~~l~~~~~~---------~~~~v~~~~~~~~~~-~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~ 70 (438)
T PRK10879 1 MTQQEFQRRRQALLAKMQP---------GSAALIFAAPEATRS-ADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHN 70 (438)
T ss_pred CChHHHHHHHHHHHhhCCC---------CcEEEEeCCCccccC-CCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCC
Confidence 4678999999999999986 467888899888775 79999999999999999999999888775532 3
Q ss_pred eeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCC--CCcccc--
Q 011203 89 KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNF--SKPAQF-- 164 (491)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~--~~~~~~-- 164 (491)
+.+||+|+.+...+.|.|.+.+.++..+.+++|++.+.+++.+.|..++. +...++...+........ .+...+
T Consensus 71 ~~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (438)
T PRK10879 71 HSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLN--GLDVVYHAQGEYAYADEIVFSALEKLRK 148 (438)
T ss_pred eEEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhc--CCceEEecCCccccchhHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999999988753 234454322211000000 000000
Q ss_pred ---c---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCc
Q 011203 165 ---E---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSY 238 (491)
Q Consensus 165 ---~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~ 238 (491)
. ...+++|+.+++.++|+|||++||++||+|++++..++..+++.++||+||.||++.+.+.+.++ |+...+|
T Consensus 149 ~~~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~-G~~~~~~ 227 (438)
T PRK10879 149 GSRQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRH-GARYPSY 227 (438)
T ss_pred hhccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC-CCCCCCC
Confidence 0 12457789999999999999999999999999999999999999999999999999998888775 7777889
Q ss_pred ceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhC
Q 011203 239 TCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMK 318 (491)
Q Consensus 239 ~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lk 318 (491)
+++|++|.|++.+||.+ ++++|++||+|++|+|+.|+||++|+||||+++|++|++|+++|++++++++++++++|
T Consensus 228 ~~iv~~G~na~~~H~~~----~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~k 303 (438)
T PRK10879 228 NTIVGSGENGCILHYTE----NESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYR 303 (438)
T ss_pred CcEEEEcCccccccCCC----CccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999765 88999999999999999999999999999999899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCC
Q 011203 319 PGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVR 398 (491)
Q Consensus 319 pG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~ 398 (491)
||+++++|+.++.+++.++|.+.|+.++.++++++......+|+|++||+||+++||.|.+. ..++.
T Consensus 304 pG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~-------------~~~~~ 370 (438)
T PRK10879 304 PGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG-------------QDRSR 370 (438)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC-------------CCCCC
Confidence 99999999999999999999999999988888877766678999999999999999977542 12467
Q ss_pred ccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCHHHHHHHHh
Q 011203 399 ELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIMA 477 (491)
Q Consensus 399 ~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~~~ie~~~~ 477 (491)
+|+||||||||||+|+.+ ++++++.+.+. |+||||+|+||++|+|+|| .+|+++++||++|+
T Consensus 371 ~L~~GmV~tvEPgiY~~~----------------~~~~~~~~~~~-GiRiED~VlVT~~G~e~LT~~~pk~~~~iE~~m~ 433 (438)
T PRK10879 371 ILEPGMVLTVEPGLYIAP----------------DADVPEQYRGI-GIRIEDDIVITETGNENLTASVVKKPDEIEALMA 433 (438)
T ss_pred cCCCCCEEEECCEEEECC----------------CcCcccccCcc-EEEeccEEEECCCcCeEcCccCCCCHHHHHHHHH
Confidence 999999999999999854 23444555565 9999999999999999999 69999999999996
Q ss_pred C
Q 011203 478 G 478 (491)
Q Consensus 478 ~ 478 (491)
+
T Consensus 434 ~ 434 (438)
T PRK10879 434 A 434 (438)
T ss_pred h
Confidence 5
No 3
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-72 Score=541.78 Aligned_cols=422 Identities=26% Similarity=0.402 Sum_probs=361.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEE
Q 011203 4 SSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI 83 (491)
Q Consensus 4 ~~~~~~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi 83 (491)
-+++.++.++..||..||.||.+.++. ++++|+.+++ ..+++++..|+|+|++||+||||+.+|+.++++
T Consensus 54 ~pgEltPgis~~Ey~~RR~rl~~ll~~---------~a~~il~sap-~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l 123 (488)
T KOG2414|consen 54 QPGELTPGISATEYKERRSRLMSLLPA---------NAMVILGSAP-VKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLL 123 (488)
T ss_pred CCCCcCCCccHHHHHHHHHHHHHhCCc---------ccEEEEccCc-hhhhcCccceeeecCCCeEEEeccCCCCeeEEE
Confidence 367889999999999999999999987 4788886654 566689999999999999999999999998888
Q ss_pred EeCCC---eeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCC--C
Q 011203 84 DIATG---KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNN--F 158 (491)
Q Consensus 84 ~~~~g---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~--~ 158 (491)
...+. ...+|+|+++...+.|+|.+.+.....+..++++....+++..+|.+..+. ..++.- .....+ .. +
T Consensus 124 ~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~--~~~i~~-d~~ss~-a~s~~ 199 (488)
T KOG2414|consen 124 LKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSAL--LYKIWQ-DKASSK-ASSAL 199 (488)
T ss_pred eecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhh--hhhhhh-hhccch-hhhHH
Confidence 64332 468999999999999999998887778888999988899999988876421 112211 111100 00 0
Q ss_pred CCccccc----ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC
Q 011203 159 SKPAQFE----FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR 234 (491)
Q Consensus 159 ~~~~~~~----~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~ 234 (491)
.....|. ..-.++.++.+|.++|.|||+.|+++||+||.|+.+++-..+-.-|++..|..+.+.++..++.+ |++
T Consensus 200 ~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~r-Gad 278 (488)
T KOG2414|consen 200 KNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRR-GAD 278 (488)
T ss_pred HHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeec-Ccc
Confidence 0000111 12236789999999999999999999999999999999999999999999999999999999865 899
Q ss_pred CCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHH
Q 011203 235 HCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVI 314 (491)
Q Consensus 235 ~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~ 314 (491)
..+|+|+|+.|.|+.++||.. ++..++++|+|++|.||.++||++|+||||+++|++|..|+++|+++++.|+.++
T Consensus 279 ~~AYpPVVAgG~na~tIHY~~----Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~eci 354 (488)
T KOG2414|consen 279 RLAYPPVVAGGKNANTIHYVR----NNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECI 354 (488)
T ss_pred ccccCCeeecCcccceEEEee----cccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 8889999999999999999999999999999999999999999999999999999
Q ss_pred HHhCC--CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCc
Q 011203 315 NAMKP--GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLK 392 (491)
Q Consensus 315 ~~lkp--G~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~ 392 (491)
+.++| |.+..+|+......+.+.|.+.|+.+..-.++. ....++||++||-+|++|||+|..+
T Consensus 355 k~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~---~~~klcPHhVgHyLGmDVHD~p~v~------------ 419 (488)
T KOG2414|consen 355 KYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMI---QAEKLCPHHVGHYLGMDVHDCPTVS------------ 419 (488)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHH---hhhhcCCcccchhcCcccccCCCCC------------
Confidence 99999 999999999999999999999997665444443 3457999999999999999987433
Q ss_pred CcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCHHH
Q 011203 393 SLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISD 471 (491)
Q Consensus 393 ~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~~~ 471 (491)
.+.+|+||||||||||+|++. +|+.+++|.|+ |+||||+|+|+|+|.++|| .+||++.+
T Consensus 420 ---r~~pL~pg~ViTIEPGvYIP~----------------d~d~P~~FrGI-GiRIEDDV~i~edg~evLT~a~pKei~~ 479 (488)
T KOG2414|consen 420 ---RDIPLQPGMVITIEPGVYIPE----------------DDDPPEEFRGI-GIRIEDDVAIGEDGPEVLTAACPKEIIE 479 (488)
T ss_pred ---CCccCCCCceEEecCceecCc----------------cCCCchHhcCc-eEEeecceEeccCCceeehhcccCCHHH
Confidence 357899999999999999976 57888999999 9999999999999999999 89999999
Q ss_pred HHHHHhCC
Q 011203 472 IEAIMAGA 479 (491)
Q Consensus 472 ie~~~~~~ 479 (491)
||.+|+..
T Consensus 480 ie~l~~~~ 487 (488)
T KOG2414|consen 480 IERLMKQA 487 (488)
T ss_pred HHHHHhcc
Confidence 99999864
No 4
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2.9e-71 Score=573.07 Aligned_cols=426 Identities=31% Similarity=0.462 Sum_probs=347.0
Q ss_pred CHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCC-CCCEEEEEEeCCC-ee
Q 011203 13 PKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVR-EPGFYGAIDIATG-KS 90 (491)
Q Consensus 13 ~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~-~~~~~lvi~~~~g-~~ 90 (491)
....|.++|+++.+++++.+...+. +.+|+.++....++++|+.|+|||+++|+||||+. .|++++++.+.++ +.
T Consensus 4 ~~~~~~~~~~~~~~r~~~~~~~~~~---~~i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~ 80 (443)
T PRK13607 4 LASLYKEHIATLQQRTRDALAREGL---DALLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKL 80 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC---CEEEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEE
Confidence 3567999999999998765443333 45777788888778899999999999999999996 7999998876534 55
Q ss_pred EEeecCCCCccccccccCCC-hhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc-ccc
Q 011203 91 ILFAPRLPPDYAVWLGKIKP-LSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE-FET 168 (491)
Q Consensus 91 ~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~-~~~ 168 (491)
+||.| .+ .|.+.... .+.|.+.++++.+.+.+++...|... +.....+ +...... ....+. +.+
T Consensus 81 ~l~~~-~d----~W~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~--~~~~~~~---~~~~~~~~~~ 146 (443)
T PRK13607 81 WFYQP-VD----YWHNVEPLPESFWTEEVDIKALTKADGIASLLPAD----RGNVAYI--GEVPERA---LALGFEASNI 146 (443)
T ss_pred EEEec-Cc----cccCCCCCchHHHHHhcChHhcccHHHHHHhhccC----CCceEEe--ccccccc---ccccCccccc
Confidence 66665 33 59887644 44467878888887878777776542 2222222 2111100 000111 234
Q ss_pred cccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCC
Q 011203 169 ELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS 248 (491)
Q Consensus 169 ~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~ 248 (491)
+..++.++|.++|+|||++||++||+|+++++++++++++.++||+||.||++.+.... ..++...+|++|+++|.|+
T Consensus 147 ~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~--~~~~~~~~y~~iva~G~na 224 (443)
T PRK13607 147 NPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT--GQRDNDVPYGNIVALNEHA 224 (443)
T ss_pred ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh--CCCCcCCCCCcEEEecCcc
Confidence 56678999999999999999999999999999999999999999999999998765442 2245567899999999999
Q ss_pred cccccCCCCCCCC-CccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Q 011203 249 AVLHYGHAAAPND-RTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMH 327 (491)
Q Consensus 249 ~~~h~~~~~~p~~-~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~ 327 (491)
+++||.+ ++ +.+++||+|++|+|+.|+||++|+||||+ |.++++++++|++++++++++++++|||++++||+
T Consensus 225 a~~H~~~----~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~ 298 (443)
T PRK13607 225 AVLHYTK----LDHQAPAEMRSFLIDAGAEYNGYAADITRTYA--AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLH 298 (443)
T ss_pred eEecCCc----cCCCCCCCCCEEEEEeeEEECCEEecceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHH
Confidence 9999865 55 46899999999999999999999999997 67899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCccC-ChHHHHHhhcccccCccccccccCCcccCCCCCCC---CCCCCCCCCCcCcCCCCccCCC
Q 011203 328 KLAEKIILESLKKGGVMVG-NVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPK---GTERSKEPGLKSLRTVRELQER 403 (491)
Q Consensus 328 ~~~~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~---~~~~~~~~~~~~~~~~~~L~~G 403 (491)
.++++++.+.|.+.|+.++ .+++++++++...||+|++||+|||++||.+++.. |..++..+.+.+.+..++|+||
T Consensus 299 ~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~G 378 (443)
T PRK13607 299 IQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPG 378 (443)
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCC
Confidence 9999999999999999986 88999999998889999999999999999887643 2222222233344667899999
Q ss_pred CEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 404 MVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 404 mv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
||||||||+|+.+.++++|.. +....+|||+.++.|+++|||||||+|+||++|+|+||.
T Consensus 379 mV~TvEPGiY~~~~ll~~~~~-~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 379 MVLTIEPGLYFIDSLLAPLRE-GPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred cEEEECCeeeeChhhhchhhh-hhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 999999999999999999884 467799999999999999999999999999999999994
No 5
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-60 Score=489.46 Aligned_cols=367 Identities=30% Similarity=0.437 Sum_probs=290.2
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCC---CCEEEEEEeC
Q 011203 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVRE---PGFYGAIDIA 86 (491)
Q Consensus 10 ~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~---~~~~lvi~~~ 86 (491)
..++..++..|+.+++..|.+. ++ +++ ++ ++.+||+||||+.. .....++++.
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~----~~--~~~-~~-----------------~~~~n~~yltg~~~~~~~~~~~~~~~~ 58 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEA----GL--DAL-LL-----------------TSPSNFYYLTGFDAFGFERLQALLVPA 58 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHc----CC--cEE-Ee-----------------cCCCceEEEeCCCCCcccceEEEEEcC
Confidence 4567789999999999999874 44 333 33 36788999999985 2234556677
Q ss_pred CCeeEEeecCCCCccccccccCC--ChhHHHHHhcCceec--chhHHHHHHHhcccCCCCCeEEEecCCCCCCCCC--CC
Q 011203 87 TGKSILFAPRLPPDYAVWLGKIK--PLSYFQEKYMVNMVY--YTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNF--SK 160 (491)
Q Consensus 87 ~g~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~--~~ 160 (491)
+++++||++..+.....|..... .+..+.. +... +.+.+.+.+.... ...+.+++ +.....+ ..
T Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~g~----~~~~~~~~~~~ 128 (384)
T COG0006 59 EGEPVLFVRGRDEEAAKETSWIKLENVEVYED----DEDPAAPLDLLGALLEELG--LAGKRIGI----ESASIFLTLAA 128 (384)
T ss_pred CCceEEEEcchhHHHHHhhcccccCceEEEec----CCccccHHHHHHHHHHhcc--ccccceEE----EeccCccCHHH
Confidence 88999999998876555543221 1211111 1110 2344555555431 02345654 2221111 11
Q ss_pred ccccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 011203 161 PAQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCS 237 (491)
Q Consensus 161 ~~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~ 237 (491)
...+. ...+++++++.+..+|+|||+.||+.||+|+++++.++.++++.++||+||.||++++...+.+. |+...+
T Consensus 129 ~~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~-G~~~~s 207 (384)
T COG0006 129 FERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKG-GAEGPS 207 (384)
T ss_pred HHHHHhhCCCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCCccC
Confidence 11111 12367899999999999999999999999999999999999999999999999999999998876 677789
Q ss_pred cceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 011203 238 YTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM 317 (491)
Q Consensus 238 ~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~l 317 (491)
|.+||++|+|++.+||.+ +++.+++||+|++|+|+.|+|||||+||||++ |+|+++|+++|+.++++|+++++++
T Consensus 208 f~~iv~~G~n~a~pH~~~----~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V~~aq~aa~~~~ 282 (384)
T COG0006 208 FDTIVASGENAALPHYTP----SDRKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAVLEAQEAAIAAI 282 (384)
T ss_pred cCcEEeccccccCcCCCC----CcccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999765 89999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC--CcccCCCCCCCCCCCCCCCCCcCcC
Q 011203 318 KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKSLR 395 (491)
Q Consensus 318 kpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~~~ 395 (491)
|||++++||+.++++++. +.|+ . .+|.|++|||+| +++||.|.+ ....
T Consensus 283 rpG~~~~~vd~~ar~~i~----~~g~-------------~-~~~~h~~GHgvG~~l~vhE~p~~------------~~~~ 332 (384)
T COG0006 283 RPGVTGGEVDAAARQVLE----KAGY-------------G-LYFLHGTGHGVGFVLDVHEHPQY------------LSPG 332 (384)
T ss_pred CCCCcHHHHHHHHHHHHH----hcCC-------------c-ccccCCccccCCCCcccCcCccc------------cCCC
Confidence 999999999999999975 4454 2 478999999999 999997631 1234
Q ss_pred CCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHHH
Q 011203 396 TVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDI 472 (491)
Q Consensus 396 ~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~i 472 (491)
++.+|+|||||++|||+|. +|.+||||||+|+||++|+|+||..|+++..+
T Consensus 333 ~~~~L~~GMv~t~Epg~y~--------------------------~g~~GirIEd~vlVte~G~e~LT~~~~~~~~~ 383 (384)
T COG0006 333 SDTTLEPGMVFSIEPGIYI--------------------------PGGGGVRIEDTVLVTEDGFEVLTRVPKELLVI 383 (384)
T ss_pred CCccccCCcEEEecccccc--------------------------CCCceEEEEEEEEEcCCCceecccCCcceeec
Confidence 6789999999999999997 67889999999999999999999888876543
No 6
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=1.4e-60 Score=490.01 Aligned_cols=369 Identities=16% Similarity=0.193 Sum_probs=280.6
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC---EEEEEEeC
Q 011203 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG---FYGAIDIA 86 (491)
Q Consensus 10 ~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~---~~lvi~~~ 86 (491)
..||.+||++|++||++.|+++ ++ |+++|+ ...|++|||||.... ..+++++.
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~----~l--Dalli~------------------~~~ni~YltG~~~~~~~~~~~l~v~~ 59 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEAR----GI--DLLIVT------------------DPSNMAWLTGYDGWSFYVHQCVLLPP 59 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHc----CC--CEEEEc------------------CcccceeeccCCCCceEEEEEEEEcC
Confidence 6799999999999999999985 77 666555 346799999998543 23345577
Q ss_pred CCeeEEeecCCCCcc---ccccc--cCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCC--CCC
Q 011203 87 TGKSILFAPRLPPDY---AVWLG--KIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSN--NFS 159 (491)
Q Consensus 87 ~g~~~l~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~--~~~ 159 (491)
+|+++++++..+... ..|.. .+..+....- ......+.+.+.+.+++.. ....+|++ +.+.. ++.
T Consensus 60 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g--~~~~~ig~----e~~~~~~~~~ 131 (391)
T TIGR02993 60 EGEPIWYGRGQDANGAKRTAFMDHDNIVGYPDHYV--QSTERHPMDYLSEILQDRG--WDSLTIGV----EMDNYYFSAA 131 (391)
T ss_pred CCceEEEehhhhhhhHhheeeccccceeecccccc--cCCCCCHHHHHHHHHHhcC--CCCCcEEE----ecCCCccCHH
Confidence 899999998776532 22321 1222211000 0000112345566665541 11236765 33321 111
Q ss_pred Cccccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---CCC
Q 011203 160 KPAQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---GGC 233 (491)
Q Consensus 160 ~~~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~---~g~ 233 (491)
....+. ..++++|+++++.++|+|||++||++||+|++|++++++++.+.++||+||.||++.+....... .|+
T Consensus 132 ~~~~l~~~l~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~ 211 (391)
T TIGR02993 132 AFASLQKHLPNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGG 211 (391)
T ss_pred HHHHHHHhCCCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCC
Confidence 112222 24678899999999999999999999999999999999999999999999999999886553321 244
Q ss_pred CCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHH
Q 011203 234 RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAV 313 (491)
Q Consensus 234 ~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~ 313 (491)
...++.++++||+|++.+|+. |++++|++||+|++|+|+.|+|||+|++|||++ |+|+++|+++|+.++++++++
T Consensus 212 ~~~~~~~iv~sG~~~a~pH~~----~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~~~~~~a~~~~ 286 (391)
T TIGR02993 212 DYPAIVPLLPSGADASAPHLT----WDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAEKAVLEGMEAG 286 (391)
T ss_pred CcCCcccccccCccccCCCCC----CCCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHHHHHHHHHHHH
Confidence 456777899999999999964 489999999999999999999999999999999 999999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcC
Q 011203 314 INAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKS 393 (491)
Q Consensus 314 ~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~ 393 (491)
++++|||++++||+++++++++ +.|+ . ..|++|||||+++|+.+. . ..| ..+
T Consensus 287 i~~ikpG~~~~dv~~~~~~~~~----~~G~-------------~---~~h~~GhgiGl~~~~~~~--e--~~~----~l~ 338 (391)
T TIGR02993 287 LEAAKPGNTCEDIANAFFAVLK----KYGI-------------H---KDSRTGYPIGLSYPPDWG--E--RTM----SLR 338 (391)
T ss_pred HHHcCCCCcHHHHHHHHHHHHH----HcCC-------------c---cCCCceeeeccCcCCCCC--C--ccc----ccc
Confidence 9999999999999999999874 4665 1 248999999999875211 0 011 123
Q ss_pred cCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 394 LRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 394 ~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
..++.+|++||||+||||+|+ ++. |+||||+|+||++|+|+||..|+++.
T Consensus 339 ~~~~~~L~~GMv~tvEpgiy~--------------------------~~~-Gvried~v~VT~~G~e~Lt~~p~~l~ 388 (391)
T TIGR02993 339 PGDNTVLKPGMTFHFMTGLWM--------------------------EDW-GLEITESILITETGVECLSSVPRKLF 388 (391)
T ss_pred CCCCceecCCCEEEEcceeEe--------------------------CCC-CeEEeeEEEECCCcceecccCCcccE
Confidence 456789999999999999997 454 89999999999999999999999974
No 7
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=3.4e-60 Score=483.25 Aligned_cols=345 Identities=24% Similarity=0.366 Sum_probs=265.2
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCCeeEEeecCCC
Q 011203 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLP 98 (491)
Q Consensus 19 ~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g~~~l~~~~~~ 98 (491)
+|+++|++.|++. ++ |+++|. ...|++|||||....++++| ..++ .+||++...
T Consensus 2 ~Rl~~l~~~m~~~----~l--Da~lI~------------------~~~n~~YLTGf~g~~g~llI-t~~~-~~l~td~ry 55 (361)
T PRK09795 2 TLLASLRDWLKAQ----QL--DAVLLS------------------SRQNKQPHLGISTGSGYVVI-SRES-AHILVDSRY 55 (361)
T ss_pred cHHHHHHHHHHHC----CC--CEEEEC------------------CccccccccCccCCCeEEEE-ECCC-CEEEcCcch
Confidence 5899999999874 66 666655 33578999999976665556 4344 567777643
Q ss_pred Ccc--ccccccCCChhHHHHHhcCceecc--hhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc--ccccccc
Q 011203 99 PDY--AVWLGKIKPLSYFQEKYMVNMVYY--TDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE--FETELNT 172 (491)
Q Consensus 99 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~~ 172 (491)
... ..+.+ .+-+.+ .+.+.+.+.+.++..+.++|++ +.+..++.....+. +...+++
T Consensus 56 ~~qa~~~~~~-------------~~v~~~~~~~~~~~~L~~~L~~~~~~~Ig~----e~~~~s~~~~~~L~~~l~~~~~~ 118 (361)
T PRK09795 56 YADVEARAQG-------------YQLHLLDATNTLTTIVNQIIADEQLQTLGF----EGQQVSWETAHRWQSELNAKLVS 118 (361)
T ss_pred HHHHHhhCCC-------------ceEEEecCCccHHHHHHHHHHhcCCcEEEE----ecCcccHHHHHHHHHhcCccccc
Confidence 221 11110 000000 1112233333333224567865 32221211111221 1223333
Q ss_pred hHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccc
Q 011203 173 LHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLH 252 (491)
Q Consensus 173 ~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h 252 (491)
. .+..+|+|||++||++||+|+++++++++.+.+.++||+||.||++.+...+.++ |+...+|++|++||.|++.||
T Consensus 119 ~--~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~-G~~~~~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 119 A--TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQ-GAEKASFDTIVASGWRGALPH 195 (361)
T ss_pred c--cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHC-CCCcCCCCeEEEEeccccccC
Confidence 3 3899999999999999999999999999999999999999999999999888775 778889999999999999999
Q ss_pred cCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCC-CCHH---HHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Q 011203 253 YGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-FTSD---QSLIYNAVLKAHNAVINAMKPGVCWVDMHK 328 (491)
Q Consensus 253 ~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~-~~~~---~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~ 328 (491)
+. |++++|++||+|++|+|+.|+|||+|+||||+++|+ ++++ ++++|++++++++++++++|||++++||++
T Consensus 196 ~~----~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~ 271 (361)
T PRK09795 196 GK----ASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDD 271 (361)
T ss_pred CC----CCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 54 589999999999999999999999999999999443 2333 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEE
Q 011203 329 LAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITV 408 (491)
Q Consensus 329 ~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~i 408 (491)
+++++++ +.|| + .+|.|++|||||+++||.|.+. ..++.+|+|||||+|
T Consensus 272 ~~~~~~~----~~g~-------------~-~~~~h~~GHgiGl~~he~p~i~-------------~~~~~~l~~gmv~~i 320 (361)
T PRK09795 272 AARRVIT----EAGY-------------G-DYFGHNTGHAIGIEVHEDPRFS-------------PRDTTTLQPGMLLTV 320 (361)
T ss_pred HHHHHHH----HcCC-------------C-ccCCCCCCccCCccccCCCCcC-------------CCCCCCcCCCCEEEE
Confidence 9999975 4565 2 4789999999999999976432 345789999999999
Q ss_pred CCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 409 EPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 409 epg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
|||+|+ ++++|+||||||+||++|+|+||..|+++.
T Consensus 321 Epgiy~--------------------------~~~~gvriEd~v~vt~~G~e~Lt~~~~~l~ 356 (361)
T PRK09795 321 EPGIYL--------------------------PGQGGVRIEDVVLVTPQGAEVLYAMPKTVL 356 (361)
T ss_pred CCEEEe--------------------------CCCCEEEEeeEEEECCCCcEeCcCCCceEE
Confidence 999997 678899999999999999999999999864
No 8
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=2.4e-56 Score=460.11 Aligned_cols=357 Identities=16% Similarity=0.205 Sum_probs=265.8
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC--------EEEEEEeCC-Cee
Q 011203 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG--------FYGAIDIAT-GKS 90 (491)
Q Consensus 20 R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~--------~~lvi~~~~-g~~ 90 (491)
-++|+++.|+++ ++ |+++|. +.+||+|||||.... .++++++.+ ++|
T Consensus 12 ~~~rlr~~m~~~----gl--D~lvl~------------------~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p 67 (406)
T PRK14575 12 VSRKLRTIMERD----NI--DAVIVT------------------TCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIP 67 (406)
T ss_pred HHHHHHHHHHHc----CC--CEEeec------------------CcchheeecccccccceecccCCceEEEEEcCCCCC
Confidence 366788888775 78 554433 456899999997432 123455666 556
Q ss_pred E-EeecCCCCcccccc------ccCCChhHHHHH----------hcCceecchh----HHHHHHHhcccCCCCCeEEEec
Q 011203 91 I-LFAPRLPPDYAVWL------GKIKPLSYFQEK----------YMVNMVYYTD----EIVGVLQGHYKEPGKPLLFLLH 149 (491)
Q Consensus 91 ~-l~~~~~~~~~~~~~------~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~l~~~~~~~~~~~i~~~~ 149 (491)
+ +++|.++....... .....+.+.... ..-+..++.+ .+.+.|++.. ...++|++
T Consensus 68 ~~~i~p~~E~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~igv-- 143 (406)
T PRK14575 68 SLIIMNEFEAASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDAR--VLNKKIAI-- 143 (406)
T ss_pred ceEEechhhhhhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcC--CcCCEEEE--
Confidence 6 77777765532111 011111110000 0001111223 3344454321 13567865
Q ss_pred CCCCCCCCCCCccccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 011203 150 GLNTDSNNFSKPAQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHH 226 (491)
Q Consensus 150 g~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~ 226 (491)
+.+..+......+. .+++++|+++++.++|+|||++||++||+|+++++++++++++.++||+||.||++.+...
T Consensus 144 --e~~~~~~~~~~~l~~~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~ 221 (406)
T PRK14575 144 --DLNIMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAA 221 (406)
T ss_pred --ccCCCCHHHHHHHHHhCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 33322211112221 3466889999999999999999999999999999999999999999999999999999888
Q ss_pred HHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHH
Q 011203 227 TYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAV 306 (491)
Q Consensus 227 ~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~ 306 (491)
+... |....++.+++.+|.+ ..+|+ .|+++++++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+++
T Consensus 222 ~~~~-g~~~~~~~~~v~~G~~-~~~h~----~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~~~~ 294 (406)
T PRK14575 222 VMSK-SETHFSRFHLISVGAD-FSPKL----IPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTI 294 (406)
T ss_pred HHHc-CCCcCCcCceEEECCC-cccCC----CCCCCcCCCCCEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHHHHH
Confidence 8765 4433444468889988 46784 4589999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC--CcccCCCCCCCCCC
Q 011203 307 LKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTE 384 (491)
Q Consensus 307 ~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~ 384 (491)
+++++++++++|||++++||+++++++++ +.|+ . .++.|++|||+| +.+||.|.+.
T Consensus 295 ~~a~~~~~~~~rpG~~~~dv~~a~~~~~~----~~G~-------------~-~~~~~~~GHGiG~~lg~~e~P~i~---- 352 (406)
T PRK14575 295 RTGHEHMLSMVAPGVKMKDVFDSTMEVIK----KSGL-------------P-NYNRGHLGHGNGVFLGLEESPFVS---- 352 (406)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcCC-------------c-cccCCCCCCcccCCCCCccCCCCC----
Confidence 99999999999999999999999999874 4665 2 367789999999 5889866332
Q ss_pred CCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 385 RSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
..++.+|+|||||++|||+|. ++.+|+|+||||+||++|+|+||.
T Consensus 353 ---------~~~~~~Le~GMv~tiEpgiy~--------------------------~g~gGvriEDtvlVT~~G~e~LT~ 397 (406)
T PRK14575 353 ---------THATESFTSGMVLSLETPYYG--------------------------YNLGSIMIEDMILINKEGIEFLSK 397 (406)
T ss_pred ---------CCCCCCcCCCCEEEECCeeec--------------------------CCCcEEEEEeEEEEcCCCcccCCC
Confidence 235689999999999999997 567899999999999999999999
Q ss_pred CCCCHH
Q 011203 465 VPREIS 470 (491)
Q Consensus 465 ~p~~~~ 470 (491)
.|+++.
T Consensus 398 ~p~~l~ 403 (406)
T PRK14575 398 LPRDLV 403 (406)
T ss_pred CCcccc
Confidence 999875
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.7e-55 Score=452.10 Aligned_cols=240 Identities=20% Similarity=0.301 Sum_probs=213.5
Q ss_pred cccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCC
Q 011203 167 ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE 246 (491)
Q Consensus 167 ~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~ 246 (491)
+.+++|+++++.++|+|||++||++||+|++++++++..+++.++||+||.||++.+...+... |....++.+++++|+
T Consensus 161 ~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~-g~~~~~~~~~v~~G~ 239 (405)
T PRK14576 161 GLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSF-PETNFSRFNLISVGD 239 (405)
T ss_pred CCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCcCCCCCEEEECC
Confidence 4678899999999999999999999999999999999999999999999999999998888765 533344447899999
Q ss_pred CCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Q 011203 247 NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDM 326 (491)
Q Consensus 247 ~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev 326 (491)
++ .+|+. |+++++++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+++.++++++++++|||++++||
T Consensus 240 ~~-~~h~~----~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv 313 (405)
T PRK14576 240 NF-SPKII----ADTTPAKVGDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAV 313 (405)
T ss_pred cc-cCCCC----CCCcccCCCCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 94 67854 589999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC--CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCC
Q 011203 327 HKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERM 404 (491)
Q Consensus 327 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gm 404 (491)
+.+++++++ +.|+ . .++.|++|||+| +.+||.|.+. ..++.+|++||
T Consensus 314 ~~a~~~~~~----~~G~-------------~-~~~~~~~GHgiG~~l~~~e~P~i~-------------~~~~~~Le~GM 362 (405)
T PRK14576 314 FDSTMAVIK----TSGL-------------P-HYNRGHLGHGDGVFLGLEEVPFVS-------------TQATETFCPGM 362 (405)
T ss_pred HHHHHHHHH----HcCC-------------c-cccCCCCCCCCCCCCCcCcCCCcC-------------CCCCCccCCCC
Confidence 999999874 4665 2 467789999999 8889866332 23568999999
Q ss_pred EEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 405 VITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 405 v~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
||++||++|. +|.+|+|+||||+||++|+|+||..|+++.
T Consensus 363 v~~vEp~~y~--------------------------~g~ggvriEDtvlVTe~G~e~LT~~p~~l~ 402 (405)
T PRK14576 363 VLSLETPYYG--------------------------IGVGSIMLEDMILITDSGFEFLSKLDRDLR 402 (405)
T ss_pred EEEECCceee--------------------------cCCCEEEEeeEEEECCCccccCCCCCcccc
Confidence 9999999997 577899999999999999999999998864
No 10
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=4.8e-51 Score=408.05 Aligned_cols=240 Identities=22% Similarity=0.353 Sum_probs=211.6
Q ss_pred cccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCC
Q 011203 167 ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE 246 (491)
Q Consensus 167 ~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~ 246 (491)
+++++|++.++.++|+|||++||++||+|++++++++..+.+.++||+||.||++.+...+.+. |....++.+++++|.
T Consensus 79 ~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~-g~~~~~~~~~i~~G~ 157 (323)
T PRK15173 79 NVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSK-SETHFSRFHLISVGA 157 (323)
T ss_pred CCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECC
Confidence 4678899999999999999999999999999999999999999999999999999998887765 444344446788888
Q ss_pred CCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Q 011203 247 NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDM 326 (491)
Q Consensus 247 ~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev 326 (491)
++ .+|+ .|+++++++||+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++++++++++|||++++||
T Consensus 158 ~~-~~h~----~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~v-G~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv 231 (323)
T PRK15173 158 DF-SPKL----IPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDV 231 (323)
T ss_pred CC-ccCC----CCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 84 5674 4589999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCC--cccCCCCCCCCCCCCCCCCCcCcCCCCccCCCC
Q 011203 327 HKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGI--DTHDPGGYPKGTERSKEPGLKSLRTVRELQERM 404 (491)
Q Consensus 327 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl--~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gm 404 (491)
+++++++++ +.|+ . .++.|++|||+|+ .+||.|.+. ..++.+|+|||
T Consensus 232 ~~a~~~~~~----~~G~-------------~-~~~~~~~GHGiG~~lg~~E~P~i~-------------~~~~~~Le~GM 280 (323)
T PRK15173 232 FDSTMEVIK----KSGL-------------P-NYNRGHLGHGNGVFLGLEESPFVS-------------THATESFTSGM 280 (323)
T ss_pred HHHHHHHHH----HcCC-------------c-cccCCCCCCcCCCCCCcCCCCCCC-------------CCCCCccCCCC
Confidence 999998874 4665 2 3677889999995 889866332 23467999999
Q ss_pred EEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 405 VITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 405 v~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
||+||||+|. ++.+|+|+||||+||++|+|+||..|+++.
T Consensus 281 V~tiEPgiy~--------------------------~g~ggvriEDtvlVTe~G~e~LT~~p~~l~ 320 (323)
T PRK15173 281 VLSLETPYYG--------------------------YNLGSIMIEDMILINKEGIEFLSKLPRDLV 320 (323)
T ss_pred EEEECCEEEc--------------------------CCCcEEEEeeEEEEcCCcceeCCCCCccce
Confidence 9999999996 467899999999999999999999998864
No 11
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=6.1e-49 Score=380.07 Aligned_cols=241 Identities=19% Similarity=0.199 Sum_probs=202.2
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccCCC
Q 011203 182 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA 256 (491)
Q Consensus 182 ~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~~ 256 (491)
.|||++||++||+|+++++++++.+++.++||+||.||++.+...+.++ |+. ..+|++++.+|.|+..+|+.+
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~i~~g~n~~~~H~~p- 80 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKH-GATSEQKGYNGYPYAICASVNDEMCHAFP- 80 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCcceEeccCCEeecCCC-
Confidence 6899999999999999999999999999999999999999999888876 554 346777888999999999654
Q ss_pred CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||+.+++++++
T Consensus 81 ---~~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~- 155 (248)
T PRK12897 81 ---ADVPLTEGDIVTIDMVVNLNGGLSDSAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVA- 155 (248)
T ss_pred ---CCcccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH-
Confidence 89999999999999999999999999999999 9999999999999999999999999999999999999998874
Q ss_pred HHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccc
Q 011203 337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID 416 (491)
Q Consensus 337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~ 416 (491)
+.|+ . .++|.+|||||+++||.|.+.. .....++.+|+|||||++||++|+..
T Consensus 156 ---~~g~-------------~--~~~~~~GHgiGl~~hE~P~i~~---------~~~~~~~~~l~~Gmv~tiEP~~~~~~ 208 (248)
T PRK12897 156 ---NEGF-------------S--VARDFTGHGIGKEIHEEPAIFH---------FGKQGQGPELQEGMVITIEPIVNVGM 208 (248)
T ss_pred ---HcCC-------------c--cCCCeEECccCCcccCCCccCC---------CCCCCCCCCcCCCCEEEECCeEecCC
Confidence 4565 2 3478899999999999774431 11223567899999999999999643
Q ss_pred ccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCC
Q 011203 417 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSV 465 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~ 465 (491)
.....+. +. |.. ...+|.+|+|+||||+||++|+|+||.+
T Consensus 209 ~~~~~~~-~~-------~~~-~~~~g~~g~r~edtv~Vt~~G~e~lt~~ 248 (248)
T PRK12897 209 RYSKVDL-NG-------WTA-RTMDGKLSAQYEHTIAITKDGPIILTKL 248 (248)
T ss_pred CceEECC-CC-------cEE-EcCCCCeEeecceEEEEeCCccEEeecC
Confidence 2211111 11 111 1126778999999999999999999963
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.8e-48 Score=379.34 Aligned_cols=246 Identities=19% Similarity=0.200 Sum_probs=204.1
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC---------CCCCcceEEeeCCCCccc
Q 011203 181 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC---------RHCSYTCICATGENSAVL 251 (491)
Q Consensus 181 R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~---------~~~~~~~iv~sG~~~~~~ 251 (491)
..|||++||++||+|++|+++++.++.+.++||+||.||++.+...+.+. |+ ...+|++++++|.|+..+
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~-g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEE-NVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCcccccCCCCcccCCCcceEEecccccc
Confidence 36899999999999999999999999999999999999999998888765 32 125788999999999999
Q ss_pred ccCCCCCCCCCccCCCCeEEEEece---------------------------EeCceEeeeeeEEeeCCCCCHHHHHHHH
Q 011203 252 HYGHAAAPNDRTFEDGDMALLDMGA---------------------------EYQFYGSDITCSFPVNGKFTSDQSLIYN 304 (491)
Q Consensus 252 h~~~~~~p~~~~l~~Gd~v~~D~g~---------------------------~~~gY~sd~tRt~~v~G~~~~~~~~~~~ 304 (491)
|+. |++++|++||+|++|+|+ .|+||++|++|||++ |+++++|+++|+
T Consensus 81 H~~----p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~ 155 (286)
T PRK07281 81 HAF----PRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMD 155 (286)
T ss_pred CCC----CCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHH
Confidence 954 589999999999999997 489999999999988 999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCC
Q 011203 305 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTE 384 (491)
Q Consensus 305 ~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~ 384 (491)
+++++++++++.+|||++++||+++++++++ +.|+ . .+.|++|||||+++||.|.++.
T Consensus 156 ~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~----~~G~-------------~--~~~~~~GHGIGl~~hE~P~i~~--- 213 (286)
T PRK07281 156 VTKEAMYRGIEQAVVGNRIGDIGAAIQEYAE----SRGY-------------G--VVRDLVGHGVGPTMHEEPMVPN--- 213 (286)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH----HcCC-------------c--cCCCeeeeeCCCccCCCCcCCC---
Confidence 9999999999999999999999999999874 4565 2 2578999999999999774321
Q ss_pred CCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 385 RSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
+.....+.+|+|||||+|||++|+....+.....|.|. ....+|.+|+|+||||+||++|+|+||.
T Consensus 214 ------~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~--------~~~~~g~~gvr~EdtvlVT~~G~e~LT~ 279 (286)
T PRK07281 214 ------YGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWA--------HKTLDGGLSCQYEHQFVITKDGPVILTS 279 (286)
T ss_pred ------cccCCCCCEECCCCEEEECCeeEcCCcceecccCCCce--------EEecCCCcEEEeccEEEEeCCcceECCC
Confidence 11233567899999999999999742211111112211 1123566799999999999999999998
Q ss_pred CCCC
Q 011203 465 VPRE 468 (491)
Q Consensus 465 ~p~~ 468 (491)
.+++
T Consensus 280 ~~~~ 283 (286)
T PRK07281 280 QGEE 283 (286)
T ss_pred CCcc
Confidence 7765
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.9e-47 Score=375.81 Aligned_cols=251 Identities=19% Similarity=0.233 Sum_probs=202.8
Q ss_pred HHHHHHhHh-cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-------CCCcceEEeeC
Q 011203 174 HPILSECRV-FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-------HCSYTCICATG 245 (491)
Q Consensus 174 ~~~i~~lR~-vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-------~~~~~~iv~sG 245 (491)
.+.++.+|. |||++||++||+|++|++++++++++.++||+||.||++.+...+... |+. ..+|++++.+|
T Consensus 33 ~~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~-G~~~~~~~~~~~~f~~~v~~g 111 (291)
T PRK12318 33 QLYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEY-NAIPAPLNYGSPPFPKTICTS 111 (291)
T ss_pred hhccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCccccccCCCCCCcceEee
Confidence 344555665 999999999999999999999999999999999999998887666554 432 24678888999
Q ss_pred CCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 011203 246 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVD 325 (491)
Q Consensus 246 ~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~e 325 (491)
.|+.++|+. |++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++.+|||++++|
T Consensus 112 ~n~~~~H~~----p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~d 186 (291)
T PRK12318 112 LNEVICHGI----PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKPGIPLYE 186 (291)
T ss_pred ccceeecCC----CCCCccCCCCEEEEEEeEEECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 999999954 489999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCE
Q 011203 326 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMV 405 (491)
Q Consensus 326 v~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv 405 (491)
|+.+++++++ +.|+- ...|.+||+||+++||.|.++. . ...++.+|+||||
T Consensus 187 v~~a~~~~~~----~~G~~---------------~~~~~~GHgIGl~~hE~P~i~~---------~-~~~~~~~L~~GMV 237 (291)
T PRK12318 187 IGEVIENCAD----KYGFS---------------VVDQFVGHGVGIKFHENPYVPH---------H-RNSSKIPLAPGMI 237 (291)
T ss_pred HHHHHHHHHH----HcCCc---------------cCCCcccCCcCccccCCCcccC---------c-CCCCCCEeCCCCE
Confidence 9999999874 46651 2357799999999999774431 1 1134578999999
Q ss_pred EEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCC
Q 011203 406 ITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPR 467 (491)
Q Consensus 406 ~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~ 467 (491)
|+|||++|...........+. |.+ ...+|..++++||||+||++|+|+||..|+
T Consensus 238 ~~iEP~i~~~~~~g~~~~~~~-------~~~-~~~~g~~~~~~edtv~VTe~G~e~LT~~~~ 291 (291)
T PRK12318 238 FTIEPMINVGKKEGVIDPINH-------WEA-RTCDNQPSAQWEHTILITETGYEILTLLDK 291 (291)
T ss_pred EEECCEEEcCCCceEEecCCC-------cEE-EecCCCeeeeeeeEEEEcCCcceeCCCCCC
Confidence 999999997421000000111 110 111355678899999999999999999885
No 14
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=2.7e-47 Score=368.01 Aligned_cols=243 Identities=51% Similarity=0.831 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCC
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 268 (491)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+. |+. .+|++++++|.|+..+|+. |++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~-G~~-~~~~~~v~~g~~~~~~H~~----~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSR-GAR-LAYSYIVAAGSNAAILHYV----HNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCC-cCCCCeEEECCCccccCCC----cCCCcCCCCC
Confidence 679999999999999999999999999999999999888876 555 6788999999999999965 4899999999
Q ss_pred eEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011203 269 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 348 (491)
Q Consensus 269 ~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~ 348 (491)
+|++|+|+.|+||++|++|||+++|+++++|+++|++++++++++++++|||++++||++++++++++.+.+.|+.+..+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999998679999999999999999999999999999999999999999998888888876544
Q ss_pred HHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccccccccc
Q 011203 349 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 428 (491)
Q Consensus 349 ~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~ 428 (491)
+++...+....+++|++||+||+++||.|.+. ....++.+|++||||++||++|+.....
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~-----------~~~~~~~~l~~GMv~~iEp~iy~~~~~~--------- 214 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYL-----------RYLRRARPLEPGMVITIEPGIYFIPDLL--------- 214 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCcccc-----------ccCCCCCCCCCCCEEEECCEEEeCCccc---------
Confidence 44433444456899999999999999976431 1234578999999999999999743111
Q ss_pred ccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 429 SKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 429 ~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
+.++ ..+.+|+|+||||+||++|+|+||.
T Consensus 215 ------~~~~-~~~~~g~~ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 215 ------DVPE-YFRGGGIRIEDDVLVTEDGPENLTR 243 (243)
T ss_pred ------cccc-ccceeEEEeeeEEEEcCCcceeCcC
Confidence 0011 1245799999999999999999984
No 15
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=8.4e-47 Score=365.49 Aligned_cols=240 Identities=21% Similarity=0.287 Sum_probs=199.1
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccCCC
Q 011203 182 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA 256 (491)
Q Consensus 182 ~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~~ 256 (491)
+|||++||++||+|+++++++++.+.+.++||+||.||++.+.+.+.++ |+. ..+|++++.+|.|+..+|+.
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~H~~-- 78 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKH-GAKPAFLGYYGFPGSVCISVNEVVIHGI-- 78 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC-CCCccccCCCCCCceeEeccccEEEecC--
Confidence 6999999999999999999999999999999999999999998888775 543 23466788889999999965
Q ss_pred CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++.+|||++++||+.+++++++
T Consensus 79 --~~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~- 154 (247)
T TIGR00500 79 --PDKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAE- 154 (247)
T ss_pred --CCCcccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-
Confidence 489999999999999999999999999999999 8999999999999999999999999999999999999999874
Q ss_pred HHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccc
Q 011203 337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID 416 (491)
Q Consensus 337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~ 416 (491)
+.|+. .+.|.+||+||+++||.|.++ .+....++.+|++||||+|||++|+..
T Consensus 155 ---~~g~~---------------~~~~~~GHgiG~~~~e~p~i~---------~~~~~~~~~~l~~gmv~~iEp~i~~~~ 207 (247)
T TIGR00500 155 ---AKGFS---------------VVREYCGHGIGRKFHEEPQIP---------NYGKKFTNVRLKEGMVFTIEPMVNTGT 207 (247)
T ss_pred ---HcCCE---------------eccCccCCccCcccCCCCccC---------CcCcCCCCCEecCCCEEEEeeEEEcCC
Confidence 45652 235679999999999977432 111223578999999999999999753
Q ss_pred ccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 417 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
..+..+. +. |.... .+|.+|+|+||||+||++|+|+||.
T Consensus 208 ~~~~~~~-~~-------~~~~~-~~~~~g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 208 EEITTAA-DG-------WTVKT-KDGSLSAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred CcEEECC-CC-------CEEEc-cCCCeEEEEeEEEEEcCCccEEccC
Confidence 2111111 11 11111 1356799999999999999999984
No 16
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=8.3e-47 Score=382.27 Aligned_cols=253 Identities=19% Similarity=0.244 Sum_probs=208.3
Q ss_pred HHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC----CCCcceEEeeCCCCccc
Q 011203 176 ILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR----HCSYTCICATGENSAVL 251 (491)
Q Consensus 176 ~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~----~~~~~~iv~sG~~~~~~ 251 (491)
.+...|.|||++||+.||+|++++.++++.+.+.++||+||.||++++...+.++++.. +..|+.++.+|.|..++
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~ 209 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVIC 209 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccccccc
Confidence 35567999999999999999999999999999999999999999999998888764321 23577778889999999
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011203 252 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 331 (491)
Q Consensus 252 h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~ 331 (491)
| +.|++++|++||+|.+|+|+.++||++|++|||+| |+++++|+++|++++++++++++++|||++++||+++++
T Consensus 210 H----gip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~ 284 (396)
T PLN03158 210 H----GIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVIN 284 (396)
T ss_pred C----CCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 9 55699999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCc
Q 011203 332 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPG 411 (491)
Q Consensus 332 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg 411 (491)
+++. +.|| ..+.|.+|||||+.+||.|.++ .+.......+|+|||||||||+
T Consensus 285 ~~~~----~~G~---------------~~v~~~~GHGIG~~~He~P~i~---------~~~~~~~~~~l~~GMVfTIEP~ 336 (396)
T PLN03158 285 RHAT----MSGL---------------SVVKSYCGHGIGELFHCAPNIP---------HYARNKAVGVMKAGQVFTIEPM 336 (396)
T ss_pred HHHH----HcCC---------------CccCCccCCccccccCCCCCCC---------cccCCCCCCEecCCcEEEECCe
Confidence 8864 5665 1356778999999999976443 1111123468999999999999
Q ss_pred cccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCHH
Q 011203 412 CYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREIS 470 (491)
Q Consensus 412 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~~ 470 (491)
+|........|.++ |... ...|.+++|+||||+||++|+|+|| ..|+...
T Consensus 337 i~~g~~~~~~~~d~--------wt~~-t~dG~~~aq~E~tvlVTe~G~EiLT~~~~~~~~ 387 (396)
T PLN03158 337 INAGVWRDRMWPDG--------WTAV-TADGKRSAQFEHTLLVTETGVEVLTARLPSSPD 387 (396)
T ss_pred eccCcccceecCCC--------ceEE-ecCCceeeEeeeEEEEeCCcceECCCCCCCCcc
Confidence 99643222223221 1111 1146678999999999999999999 5777654
No 17
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2e-46 Score=364.05 Aligned_cols=245 Identities=21% Similarity=0.249 Sum_probs=203.5
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccCC
Q 011203 181 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGH 255 (491)
Q Consensus 181 R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~ 255 (491)
-+|||++||++||+|+++++++++++++.++||+||.|+++.+...+.+. |.. ..+|++++.+|.|+..+|+.
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~-G~~~~~~~~~~~~~~~~~g~~~~~~h~~- 80 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQ-GAIPAPLGYHGFPKSICTSVNEVVCHGI- 80 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHC-CCEecccCCCCCCcCeEecccceeecCC-
Confidence 47999999999999999999999999999999999999999998887775 442 24566778899999999954
Q ss_pred CCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 256 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 256 ~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||+++++++++
T Consensus 81 ---~~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~ 156 (252)
T PRK05716 81 ---PSDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAE 156 (252)
T ss_pred ---CCCcccCCCCEEEEEEEEEECCEEEEeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999 9999999999999999999999999999999999999999874
Q ss_pred HHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccc
Q 011203 336 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 415 (491)
Q Consensus 336 ~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~ 415 (491)
+.|+. ...|.+||+||+.+||.|.++ ......++.+|+|||||+|||++|+.
T Consensus 157 ----~~g~~---------------~~~~~~GHgiG~~~~e~p~~~---------~~~~~~~~~~le~Gmv~~vEp~i~~~ 208 (252)
T PRK05716 157 ----AEGFS---------------VVREYCGHGIGRKFHEEPQIP---------HYGAPGDGPVLKEGMVFTIEPMINAG 208 (252)
T ss_pred ----HcCCe---------------eecCccccccCCccCCCCccC---------cCCCCCCCCEecCCCEEEEccEEEcC
Confidence 45651 245779999999999976432 11133467899999999999999974
Q ss_pred cccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCC
Q 011203 416 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPRE 468 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~ 468 (491)
......+ .+++ .+... +|.+|+|+||||+||++|+|+||..|++
T Consensus 209 ~~~~~~~-~~~~-------~~~~~-~g~~g~~~ed~v~Vt~~G~e~Lt~~~~~ 252 (252)
T PRK05716 209 KREVKTL-KDGW-------TVVTK-DGSLSAQYEHTVAVTEDGPEILTLRPEE 252 (252)
T ss_pred CCceEEc-CCCC-------EEEcc-CCCcEEeeeeEEEEcCCccEEeeCCCCC
Confidence 3211111 1111 11111 4667999999999999999999999875
No 18
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.7e-46 Score=357.71 Aligned_cols=222 Identities=19% Similarity=0.260 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCc------ceEEeeCCCCcccccCCCCCCCCC
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSY------TCICATGENSAVLHYGHAAAPNDR 262 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~------~~iv~sG~~~~~~h~~~~~~p~~~ 262 (491)
|++||+|+++++++++++++.++||+||.||++.+.+.+.+. |+...++ .+++++|+|+..+|+. |+++
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~-ga~~~~~~~~~~~~~~v~~G~~~~~~H~~----~~~r 75 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVRE-IAKTFPEVELMDTWTWFQSGINTDGAHNP----VTNR 75 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCCcccccCcceEEEeeccccccCCC----CCCc
Confidence 679999999999999999999999999999999998888775 4333222 2678999999999954 4899
Q ss_pred ccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCC
Q 011203 263 TFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGG 342 (491)
Q Consensus 263 ~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G 342 (491)
+|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+++.++++++++++|||++++||+++++++++ +.|
T Consensus 76 ~l~~GD~v~~d~g~~~~GY~ad~~RT~~v-G~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~----~~G 150 (228)
T cd01090 76 KVQRGDILSLNCFPMIAGYYTALERTLFL-DEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYR----EHD 150 (228)
T ss_pred ccCCCCEEEEEEeEEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcC
Confidence 99999999999999999999999999998 9999999999999999999999999999999999999999874 566
Q ss_pred CccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccc
Q 011203 343 VMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPA 422 (491)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~ 422 (491)
+. .++.|++||+||+.+||.|... + ++. ...++.+|+|||||++||++|....
T Consensus 151 ~~--------------~~~~~~~GHgiGl~~he~~~~~-g---~~~----~~~~~~~Le~GMV~~iEP~i~~~~~----- 203 (228)
T cd01090 151 LL--------------RYRTFGYGHSFGVLSHYYGREA-G---LEL----REDIDTVLEPGMVVSMEPMIMLPEG----- 203 (228)
T ss_pred CC--------------cccccccCcccccccccCCCcc-c---ccc----CCCCCCccCCCCEEEECCEEeeccc-----
Confidence 62 3678999999999999965210 0 011 2235689999999999999997320
Q ss_pred ccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 423 MENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
.+|.+|+|+||||+||++|+|+||+
T Consensus 204 -----------------~~g~gG~ried~v~Vt~~G~e~Lt~ 228 (228)
T cd01090 204 -----------------QPGAGGYREHDILVINENGAENITG 228 (228)
T ss_pred -----------------CCCCcEEEeeeEEEECCCccccCcC
Confidence 1467899999999999999999984
No 19
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.9e-45 Score=357.77 Aligned_cols=243 Identities=21% Similarity=0.201 Sum_probs=201.1
Q ss_pred hHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccC
Q 011203 180 CRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYG 254 (491)
Q Consensus 180 lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~ 254 (491)
+++|||++||++||+|+++++++++.+++.++||+||.||++.+.+.+.+. |+. ...|++++.+|.|...+|+.
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEH-GAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHC-CCEeCcccCCCCCcceEecCCCeeEecC
Confidence 467999999999999999999999999999999999999999998888765 543 23566777888999999954
Q ss_pred CCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 255 HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 255 ~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++++++
T Consensus 86 ----p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 160 (255)
T PRK12896 86 ----PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFA 160 (255)
T ss_pred ----CCCccCCCCCEEEEEEeEEECcEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 488999999999999999999999999999998 999999999999999999999999999999999999999987
Q ss_pred HHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 335 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 335 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
+ +.|+ ..+.|.+||+||+.+||.|.... ......++.+|++||||+|||++|.
T Consensus 161 ~----~~G~---------------~~~~~~~GHgiG~~~he~p~~~~--------~~~~~~~~~~le~GmV~~iEp~i~~ 213 (255)
T PRK12896 161 K----KNGY---------------SVVRDLTGHGVGRSLHEEPSVIL--------TYTDPLPNRLLRPGMTLAVEPFLNL 213 (255)
T ss_pred H----HcCC---------------EeccCcccCCcCcccccCCCccc--------cCCCCCCCCEecCCcEEEEeceEEc
Confidence 4 4565 23568899999999999763321 0112345789999999999999986
Q ss_pred ccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 415 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
....+..+. +. |.+. .-+|.+|+|+||||+||++|+|+||.
T Consensus 214 g~~~~~~~~-~~-------~~~~-~~~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 214 GAKDAETLD-DG-------WTVV-TPDKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred CCCceEEcC-CC-------CEEE-ecCCCeEEEEEEEEEEcCCcceecCC
Confidence 432222221 11 1111 11567899999999999999999995
No 20
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.1e-43 Score=340.50 Aligned_cols=225 Identities=18% Similarity=0.212 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HccCC--CcHHHHHHHHHHHHHHcCCCC---------CCCcceEEeeCCCC-ccc
Q 011203 189 LALIQFANDISSEAHVEVMK-----KTRVG--MKEYQMESMFLHHTYMYGGCR---------HCSYTCICATGENS-AVL 251 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~-----~i~~G--~tE~ei~a~~~~~~~~~~g~~---------~~~~~~iv~sG~~~-~~~ 251 (491)
+++||+|++++..+|+..+. .|.+| +||.+|+..++..+... +.. .++|++|++||.|+ ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~-~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDK-KKYKAKLDPEQLDWCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCc-hhhhcCCCHHHcCcccCCeEeECcCcccCC
Confidence 46899999999999986654 88999 99999999999888754 332 57999999999999 788
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011203 252 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 331 (491)
Q Consensus 252 h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~ 331 (491)
|+.+ +++.++.|++|++|+|++|+|||+|++|||++ | |+++|+++|++++++++++++++|||++++||+++++
T Consensus 80 h~~~----s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~ 153 (243)
T cd01091 80 SSSS----SDKLLYHFGVIICSLGARYKSYCSNIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTL 153 (243)
T ss_pred CCCC----CccccCCCCEEEEEeCcccCCEeecceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 8554 88899999999999999999999999999999 5 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCc
Q 011203 332 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPG 411 (491)
Q Consensus 332 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg 411 (491)
+++++. |. ++ ..+|+|++||+||+++||.|... ..+++.+|++||||+||||
T Consensus 154 ~~i~~~----~~-----------~~-~~~~~~~~GHgiGle~hE~~~~l------------~~~~~~~L~~GMvf~vepG 205 (243)
T cd01091 154 DYIKKK----KP-----------EL-EPNFTKNLGFGIGLEFRESSLII------------NAKNDRKLKKGMVFNLSIG 205 (243)
T ss_pred HHHHHh----Ch-----------hH-HHhCcCCcccccCcccccCcccc------------CCCCCCCcCCCCEEEEeCC
Confidence 998652 21 01 24789999999999999965221 2345789999999999999
Q ss_pred cccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCe-eeCCC
Q 011203 412 CYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGS-KNMTS 464 (491)
Q Consensus 412 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~-e~LT~ 464 (491)
+|+.+. ++ ..+...+.+|+||||||+||++|+ ++||.
T Consensus 206 i~~~~~--------~~--------~~~~~~~~~gv~ieDtV~Vt~~G~~~~LT~ 243 (243)
T cd01091 206 FSNLQN--------PE--------PKDKESKTYALLLSDTILVTEDEPAIVLTN 243 (243)
T ss_pred cccccC--------cc--------ccCccCCeeEEEEEEEEEEcCCCCceecCC
Confidence 995431 00 000013467999999999999999 99984
No 21
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.4e-42 Score=332.64 Aligned_cols=233 Identities=24% Similarity=0.276 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccCCCCCCCCCc
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHAAAPNDRT 263 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~~~~p~~~~ 263 (491)
|++||+|+++++++++++++.++||+||.||++++.+.+.++ |+. ...|+..+.+|.|+..+|+. |++++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~h~~----~~~~~ 75 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEH-GAYPAPLGYYGFPKSICTSVNEVVCHGI----PDDRV 75 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCcccccCCCCCcceecCCCCceeCCC----CCCcc
Confidence 689999999999999999999999999999999998888776 543 23455677888999999954 58999
Q ss_pred cCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011203 264 FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV 343 (491)
Q Consensus 264 l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~ 343 (491)
|++||+|++|+|+.|+||++|++|||++ |+++++|+++|+.++++++++++++|||++++||+++++++++ +.|+
T Consensus 76 l~~Gd~v~id~g~~~~GY~ad~~RT~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~----~~G~ 150 (238)
T cd01086 76 LKDGDIVNIDVGVELDGYHGDSARTFIV-GEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAE----KNGY 150 (238)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HcCc
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999999874 4565
Q ss_pred ccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccc
Q 011203 344 MVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAM 423 (491)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~ 423 (491)
. .+.|.+||+||+.+||.|... .+....++.+|++||||++||++|+....+.-+.
T Consensus 151 -------------~--~~~~~~GHgiG~~~~e~p~~~---------~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~ 206 (238)
T cd01086 151 -------------S--VVREFGGHGIGRKFHEEPQIP---------NYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLP 206 (238)
T ss_pred -------------c--eecCccccCCCCccccCCCcC---------CccCCCCCCEecCCCEEEEeeEEECCCCceEECC
Confidence 1 246779999999999966432 1112345789999999999999997421111111
Q ss_pred cccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 424 ENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
.+ |.... .+|.+|+|+||||+||++|+|+||.
T Consensus 207 ~~--------~~~~~-~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 207 DG--------WTVVT-KDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CC--------CEEEc-CCCCEEEeeeeEEEEcCCcceeCCC
Confidence 10 11111 1467899999999999999999984
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=3.5e-42 Score=324.55 Aligned_cols=208 Identities=38% Similarity=0.557 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCC
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 268 (491)
|++||+|+++++.++.++.+.++||+||.||++.+...+.++ |+...+|++++++|.|+..+|+.+ ++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~~~~~~~~~v~~g~~~~~~h~~~----~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKL-GAEGPSFDTIVASGPNSALPHGVP----SDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECccccccCCCC----CCcCcCCCC
Confidence 679999999999999999999999999999999998888775 777788999999999999999654 889999999
Q ss_pred eEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011203 269 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 348 (491)
Q Consensus 269 ~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~ 348 (491)
+|++|+|+.|+||++|++||+++ |+++++|+++|+.+.++++++++.+|||++++||+++++++++ +.|+
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~----~~g~----- 145 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAV-GEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIE----EAGY----- 145 (208)
T ss_pred EEEEEeeeeECCEeccceeEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcCc-----
Confidence 99999999999999999999999 8999999999999999999999999999999999999998874 4665
Q ss_pred HHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccccccccc
Q 011203 349 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 428 (491)
Q Consensus 349 ~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~ 428 (491)
. .+++|++||+||+++||.|.+ ..+++.+|++||||+|||++|.
T Consensus 146 --------~-~~~~~~~Gh~iG~~~~e~p~i-------------~~~~~~~l~~gmv~~iep~~~~-------------- 189 (208)
T cd01092 146 --------G-EYFIHRTGHGVGLEVHEAPYI-------------SPGSDDVLEEGMVFTIEPGIYI-------------- 189 (208)
T ss_pred --------c-ccCCCCCccccCcccCcCCCc-------------CCCCCCCcCCCCEEEECCeEEe--------------
Confidence 2 368999999999999996632 2346789999999999999986
Q ss_pred ccccccchhcccCCcceeEEceEEEEeCCCe
Q 011203 429 SKFFNHEVIGRFKDFGGVRIESDVLVTANGS 459 (491)
Q Consensus 429 ~~~~~~~~~~~~~g~ggvried~v~Vte~G~ 459 (491)
++.+|+++||||+||++|+
T Consensus 190 ------------~~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 190 ------------PGKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ------------cCCCEEEeeeEEEECCCCC
Confidence 4568999999999999985
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=4.1e-41 Score=319.23 Aligned_cols=210 Identities=26% Similarity=0.345 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCC--CcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCC---CCcc
Q 011203 190 ALIQFANDISSEAHVEVMKKTRVG--MKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPN---DRTF 264 (491)
Q Consensus 190 ~~~r~A~~i~~~~~~~~~~~i~~G--~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~---~~~l 264 (491)
+.||.+..++ ++++.+.+.++|| +||.||++.+.+.+...++....+|++++++|+|++.+|+.+ + +++|
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p----~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVALV-EFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSP----TEESNRKI 79 (224)
T ss_pred HHHHHHHHHH-HHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCc----CcccCccc
Confidence 3566666664 7888899999999 999999999987666544444568999999999999999654 6 8999
Q ss_pred CCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhCCC
Q 011203 265 EDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMK-PGVCWVDMHKLAEKIILESLKKGGV 343 (491)
Q Consensus 265 ~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lk-pG~~~~ev~~~~~~~~~~~l~~~G~ 343 (491)
++||+|++|+|+.|+||++|++|||++ |+++++|+++|+.+++++.++++.++ ||+++.+|++++++++. +.|+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~----~~g~ 154 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHL-GEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLW----KAGL 154 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH----HhCC
Confidence 999999999999999999999999998 99999999999999999999999885 89999999999998864 3443
Q ss_pred ccCChHHHHHhhcccccCccccccccC--CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccc
Q 011203 344 MVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVP 421 (491)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~ 421 (491)
.|.|++||+|| +++||.|.++ ....++.+|+|||||+|||++|.
T Consensus 155 ----------------~~~h~~GHgIG~~l~~hE~P~i~-----------~~~~~~~~L~~GmvftiEP~iy~------- 200 (224)
T cd01085 155 ----------------DYGHGTGHGVGSFLNVHEGPQSI-----------SPAPNNVPLKAGMILSNEPGYYK------- 200 (224)
T ss_pred ----------------CCCCCCCCCCCCCCcCCCCCCcC-----------CcCCCCCCcCCCCEEEECCEeEe-------
Confidence 36799999999 6889966431 01234689999999999999996
Q ss_pred cccccccccccccchhcccCCcceeEEceEEEEeCCCeeeC
Q 011203 422 AMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNM 462 (491)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~L 462 (491)
+|.+|+|+||+|+||++|+.-+
T Consensus 201 -------------------~g~~gvried~v~Vt~~G~~~~ 222 (224)
T cd01085 201 -------------------EGKYGIRIENLVLVVEAETTEF 222 (224)
T ss_pred -------------------CCCeEEEeeEEEEEeeCCcCCC
Confidence 5678999999999999998644
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=3.4e-40 Score=310.89 Aligned_cols=206 Identities=33% Similarity=0.561 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCe
Q 011203 190 ALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDM 269 (491)
Q Consensus 190 ~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~ 269 (491)
++||+|+++++++++++++.++||+||.||++.+.+.++.+.|....+|++++.+|.|+..+|+.+ ++++|++||+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----~~~~l~~gd~ 76 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTP----TDRRLQEGDI 76 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBC----CSSBESTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceec----cceeeecCCc
Confidence 589999999999999999999999999999999998854445777788999999999999999754 8999999999
Q ss_pred EEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChH
Q 011203 270 ALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVD 349 (491)
Q Consensus 270 v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~ 349 (491)
|.+|+|+.|+||++|++||+++ | ++++|+++|+.++++++.+++.+|||++++||++++.+++.+ .|+
T Consensus 77 v~id~~~~~~gy~~d~~Rt~~~-G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~----~g~------ 144 (207)
T PF00557_consen 77 VIIDFGPRYDGYHADIARTFVV-G-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEE----YGL------ 144 (207)
T ss_dssp EEEEEEEEETTEEEEEEEEEES-S-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHH----TTE------
T ss_pred ceeeccceeeeeEeeeeeEEEE-e-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHh----hcc------
Confidence 9999999999999999999998 8 999999999999999999999999999999999999998753 454
Q ss_pred HHHHhhcccccCccccccccCCcccCC-CCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccccccccc
Q 011203 350 EMMAARLGAVFMPHGLGHFLGIDTHDP-GGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 428 (491)
Q Consensus 350 ~~~~~~~~~~~~~h~~GH~iGl~~he~-~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~ 428 (491)
...++|.+||+||+++||. |.+. ..+++.+|++||||++||++++.
T Consensus 145 --------~~~~~~~~GH~iG~~~~~~~P~i~------------~~~~~~~l~~gmv~~iep~~~~~------------- 191 (207)
T PF00557_consen 145 --------EEPYPHGLGHGIGLEFHEPGPNIA------------RPGDDTVLEPGMVFAIEPGLYFI------------- 191 (207)
T ss_dssp --------GEEBTSSSEEEESSSSSEEEEEES------------STTTSSB--TTBEEEEEEEEEEE-------------
T ss_pred --------cceeeecccccccccccccceeee------------cccccceecCCCceeEeeeEEcc-------------
Confidence 1477899999999999985 4321 13467899999999999999853
Q ss_pred ccccccchhcccCCcceeEEceEEEEeC
Q 011203 429 SKFFNHEVIGRFKDFGGVRIESDVLVTA 456 (491)
Q Consensus 429 ~~~~~~~~~~~~~g~ggvried~v~Vte 456 (491)
++++|+++||+|+|||
T Consensus 192 ------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 192 ------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp ------------TTSEEEEEBEEEEEES
T ss_pred ------------CCCcEEEEEEEEEECc
Confidence 4678999999999996
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=6.1e-38 Score=294.39 Aligned_cols=207 Identities=31% Similarity=0.519 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCC
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 268 (491)
|+.||+|+++++.+++.+.+.++||+||.|+.+.+.+.+.++ |+ ..++.+++++|.|+..+|+.+ +++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~-~~~~~~~v~~g~~~~~~h~~~----~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAA-GG-YPAGPTIVGSGARTALPHYRP----DDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CC-CCCCCcEEEECccccCcCCCC----CCCCcCCCC
Confidence 578999999999999999999999999999999999998876 55 567789999999999999754 789999999
Q ss_pred eEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011203 269 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 348 (491)
Q Consensus 269 ~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~ 348 (491)
+|++|+|+.|+||++|++||+++ |+++++|+++|+.+.++++.+++.+|||+++.||++++++++++ .|+
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~----~g~----- 144 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVI-GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEE----HGL----- 144 (207)
T ss_pred EEEEEeceeECCCccceeceeEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH----cCc-----
Confidence 99999999999999999999999 89999999999999999999999999999999999999998754 443
Q ss_pred HHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccccccccc
Q 011203 349 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 428 (491)
Q Consensus 349 ~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~ 428 (491)
. .++.|++||++|+++||.|.+ ....+.+|++||||++||++|.
T Consensus 145 --------~-~~~~~~~Gh~iG~~~~e~~~~-------------~~~~~~~l~~gmv~~iep~~~~-------------- 188 (207)
T cd01066 145 --------G-PNFGHRTGHGIGLEIHEPPVL-------------KAGDDTVLEPGMVFAVEPGLYL-------------- 188 (207)
T ss_pred --------c-ccCCCCCccccCcccCCCCCc-------------CCCCCCCcCCCCEEEECCEEEE--------------
Confidence 1 367899999999999996632 2345789999999999999986
Q ss_pred ccccccchhcccCCcceeEEceEEEEeCCCe
Q 011203 429 SKFFNHEVIGRFKDFGGVRIESDVLVTANGS 459 (491)
Q Consensus 429 ~~~~~~~~~~~~~g~ggvried~v~Vte~G~ 459 (491)
++.+|+++||+|+||++|+
T Consensus 189 ------------~~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 189 ------------PGGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ------------CCCcEEEeeeEEEEeCCCC
Confidence 3346999999999999985
No 26
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=7.4e-38 Score=298.87 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---------cCCCCCCCcceEEeeCCCCcccccCCCCCC
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---------YGGCRHCSYTCICATGENSAVLHYGHAAAP 259 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~---------~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p 259 (491)
++.||+|++|++++++.+.+.++||+||.||....+..+.. ..|..+.+|+++++ .|+..+|+.+...+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCC
Confidence 36899999999999999999999999999997766555544 13556678887877 48889997641114
Q ss_pred CCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCH-----HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 260 NDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTS-----DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 260 ~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~-----~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
++++|++||+|++|+|+.|+||++|++|||++ |++++ +++++|++++++++++++++|||++++||++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 78899999999999999999999999999999 88874 8999999999999999999999999999999999997
Q ss_pred HHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 335 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 335 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
+ +.|+.. -..++.|++||++| .++. +. +...+|++||||++||+++.
T Consensus 158 ~----~~G~~~-----------~~~~~~h~~g~~~~--~~~~------~~----------~~~~~l~~gmvf~~ep~~~~ 204 (228)
T cd01089 158 V----DYGCTP-----------VEGVLSHQLKRVVS--SGEG------KA----------KLVECVKHGLLFPYPVLYEK 204 (228)
T ss_pred H----HcCCEE-----------ecCccccCcCceEe--cCCC------Cc----------cchhhccCCcccccceeEcc
Confidence 4 567421 12477899999544 3431 10 12578999999999999986
Q ss_pred ccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 415 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
+|.+++++||||+||++|+|.||.
T Consensus 205 --------------------------~g~~~~~~~~Tv~vt~~G~e~lt~ 228 (228)
T cd01089 205 --------------------------EGEVVAQFKLTVLLTPNGVTVLTG 228 (228)
T ss_pred --------------------------CCCeEEEEEEEEEEcCCCCeeCCC
Confidence 678899999999999999999984
No 27
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-36 Score=279.14 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=204.4
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC----CCCCcceEEeeCCCCcccccCCC
Q 011203 181 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC----RHCSYTCICATGENSAVLHYGHA 256 (491)
Q Consensus 181 R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~----~~~~~~~iv~sG~~~~~~h~~~~ 256 (491)
--|.++++|+.||+||+++.+.++.+...++||+|..||..++.+++++++.. .+..|+--|.+..|-.++|
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCH---- 189 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICH---- 189 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeec----
Confidence 35789999999999999999999999999999999999999999999887332 1335553344448999999
Q ss_pred CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
|+|+.|+|++||+|.+|+..-++||++|.++||+| |+.++..+++.+..+++++.+|+.+|||+++.+|.+.+++..
T Consensus 190 GIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha-- 266 (369)
T KOG2738|consen 190 GIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHA-- 266 (369)
T ss_pred CCCCcCcCCCCCEEeEEEEEEeccccCccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHh--
Confidence 88999999999999999999999999999999999 999999999999999999999999999999999999988775
Q ss_pred HHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccc
Q 011203 337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID 416 (491)
Q Consensus 337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~ 416 (491)
.+.||. .+ ..-+|||||--+|-.|++ |.+..-+...++++||+|||||.+....
T Consensus 267 --~~~g~s--VV-------------r~ycGHGig~~FH~~Pni---------pHya~n~a~GvM~~G~tFTIEPmit~G~ 320 (369)
T KOG2738|consen 267 --TKNGYS--VV-------------RSYCGHGIGRVFHCAPNI---------PHYAKNKAPGVMKPGQTFTIEPMITIGT 320 (369)
T ss_pred --hhcCce--ee-------------hhhhccccccccccCCCc---------hhhcccCCcceeecCceEEeeeeecccc
Confidence 457762 12 222799999999976544 3443333457899999999999888766
Q ss_pred ccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC-CCC
Q 011203 417 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS-VPR 467 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~-~p~ 467 (491)
.....|++|++.... .|....++|+|+|||++|+|+||. .|.
T Consensus 321 ~~d~tWPD~WT~vTa---------DG~~sAQFEhTlLVT~tG~EILT~r~~~ 363 (369)
T KOG2738|consen 321 WEDITWPDDWTAVTA---------DGKRSAQFEHTLLVTETGCEILTKRLPN 363 (369)
T ss_pred cccccCCCCceEEec---------CCceecceeeEEEEecccceehhcccCC
Confidence 555667776554433 566689999999999999999994 454
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-34 Score=273.89 Aligned_cols=243 Identities=24% Similarity=0.321 Sum_probs=193.3
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcC------CCCCCCcceEEeeCCCCcccccCC
Q 011203 182 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG------GCRHCSYTCICATGENSAVLHYGH 255 (491)
Q Consensus 182 ~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~------g~~~~~~~~iv~sG~~~~~~h~~~ 255 (491)
.+|+++||+.||+|++|+.++++.+.+.++||+|..||.....+.+.+++ |..+.++ ++|.| .|....|+.+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~-~~ciS-vNe~v~HgiP 81 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPF-PTCIS-VNEVVAHGIP 81 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCc-ceEee-hhheeeecCC
Confidence 38999999999999999999999999999999999999999998888631 2223334 45555 8999999654
Q ss_pred CCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCC-HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 256 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFT-SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 256 ~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~-~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
. .+++|++||+|.+|+|+.++||++|.++|+.| |+.+ +..+++.+++.+++.++++.+|||++++||-+++++++
T Consensus 82 -~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~ 157 (255)
T COG0024 82 -G--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYA 157 (255)
T ss_pred -C--CCcccCCCCEEEEEEEEEECCeeeeEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 1 46789999999999999999999999999999 8655 47778999999999999999999999999999999987
Q ss_pred HHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 335 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 335 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
+ +.||.. ++ .-+|||||..+||.|..+ .+.......+|+|||||+|||.+..
T Consensus 158 ~----~~G~~v--Vr-------------~~~GHgig~~~He~p~ip---------~y~~~~~~~~l~~Gmv~aIEPmi~~ 209 (255)
T COG0024 158 E----SRGFSV--VR-------------NLTGHGIGRELHEEPSIP---------NYGKDGTGVRLKEGMVFAIEPMINT 209 (255)
T ss_pred H----HcCCEE--ee-------------cccCCccCcccCCCCeec---------cccCCCCCcccCCCCEEEEeeEEEc
Confidence 4 677732 21 226999999999966544 3333334479999999999998766
Q ss_pred ccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCC
Q 011203 415 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVP 466 (491)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p 466 (491)
.......+..+.|. .. +-++-..+++|+||+||++|+++||..+
T Consensus 210 G~~~~~~~~~d~Wt-------~~-t~d~~~~aq~EHTv~Vt~~g~eilT~~~ 253 (255)
T COG0024 210 GSGEVVEGPSDRWT-------LV-TKDGSLSAQFEHTVIVTEDGCEILTLRP 253 (255)
T ss_pred CCCceEecCCCCeE-------EE-eCCCCEEeEEEEEEEEeCCCcEEeeCCC
Confidence 54333333333222 11 1234458999999999999999999655
No 29
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-36 Score=305.02 Aligned_cols=357 Identities=15% Similarity=0.193 Sum_probs=257.6
Q ss_pred CcccccccCCCc-eeecCCCCCCEEEEEEeCCCeeEEeecCCCCccccc-------cccCCChhHHHHHhcCceecchhH
Q 011203 57 DHLELFRQESYF-AYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVW-------LGKIKPLSYFQEKYMVNMVYYTDE 128 (491)
Q Consensus 57 d~~~~f~~~~~~-~YLtG~~~~~~~lvi~~~~g~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 128 (491)
+...+|+.++.+ .||.||++|++++++++ ++.++++.+..+....- .+..+.+..+.+.-.-+....++.
T Consensus 8 ~dd~~Y~KssAL~~WLlGYEfpdTilv~~~--~~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdk 85 (960)
T KOG1189|consen 8 EDDNPYQKSSALFTWLLGYEFPDTILVLCK--DKIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDK 85 (960)
T ss_pred ccccchhHHHHHHHHHhccccCceEEEEec--CcEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHH
Confidence 344566666665 59999999999988854 67777777654431110 111112111111000111112344
Q ss_pred HHHHHHhcccCCCCCeEEEecCCCCCCCCC--CCccccc-ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHH
Q 011203 129 IVGVLQGHYKEPGKPLLFLLHGLNTDSNNF--SKPAQFE-FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVE 205 (491)
Q Consensus 129 ~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~--~~~~~~~-~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~ 205 (491)
+-+.++. .++++|+. +.+.-.+-| .|-..+. .+.+.+|++..+..+-+||++.||+.+|+|+.++...|..
T Consensus 86 ii~~ik~-----~gk~vGvf-~ke~~~G~F~~~W~~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k 159 (960)
T KOG1189|consen 86 IIKAIKS-----AGKKVGVF-AKEKFQGEFMESWNKRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNK 159 (960)
T ss_pred HHHHHHh-----cCCeeeee-cccccchhHHHHHHHHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHH
Confidence 4444443 35678764 334334433 2433443 3567789999999999999999999999999999999985
Q ss_pred HH-----HHccCC--CcHHHHHHHHHHHHHHc---CCC----CCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEE
Q 011203 206 VM-----KKTRVG--MKEYQMESMFLHHTYMY---GGC----RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMAL 271 (491)
Q Consensus 206 ~~-----~~i~~G--~tE~ei~a~~~~~~~~~---~g~----~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~ 271 (491)
.+ .+|..+ +|+..+...+...+... .|. -.++|+||++||.+..+-.. +..+++.| + +|+
T Consensus 160 ~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~s---a~s~~~~L--~-~I~ 233 (960)
T KOG1189|consen 160 YLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPS---AVSDDNHL--H-VIL 233 (960)
T ss_pred HHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCccccccc---cccccccc--c-eEE
Confidence 43 455555 68888887777666432 111 25799999999999865442 44577777 4 999
Q ss_pred EEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHH
Q 011203 272 LDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEM 351 (491)
Q Consensus 272 ~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~ 351 (491)
+.+|++|++||++++||+.| .|+.+|++.|+.++.+|+++++.||||+..++||.++.+++++. +. ++
T Consensus 234 cs~G~RynsYCSNv~RT~Li--dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~----~P------el 301 (960)
T KOG1189|consen 234 CSLGIRYNSYCSNVSRTYLI--DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN----KP------EL 301 (960)
T ss_pred eeccchhhhhhccccceeee--cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc----Cc------ch
Confidence 99999999999999999999 89999999999999999999999999999999999999998752 11 12
Q ss_pred HHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccc
Q 011203 352 MAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKF 431 (491)
Q Consensus 352 ~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~ 431 (491)
+ .-|+..+|.+|||+++|.... .+++++.+|++||||.|..|+.... ++..
T Consensus 302 ~------~~~~k~lG~~iGlEFREssl~------------inaKnd~~lk~gmvFni~lGf~nl~--------n~~~--- 352 (960)
T KOG1189|consen 302 V------PNFTKNLGFGIGLEFRESSLV------------INAKNDRVLKKGMVFNISLGFSNLT--------NPES--- 352 (960)
T ss_pred h------hhhhhhcccccceeeeccccc------------ccccchhhhccCcEEEEeecccccc--------Cccc---
Confidence 1 245667999999999995422 2567889999999999999987543 1111
Q ss_pred cccchhcccCCcceeEEceEEEEeCCCe-eeCCCCCCCHHHHHHHHh
Q 011203 432 FNHEVIGRFKDFGGVRIESDVLVTANGS-KNMTSVPREISDIEAIMA 477 (491)
Q Consensus 432 ~~~~~~~~~~g~ggvried~v~Vte~G~-e~LT~~p~~~~~ie~~~~ 477 (491)
.+-+.+-|.|||+|+++++ ++||.+++....|..+++
T Consensus 353 ---------~~~yaL~l~DTvlv~e~~p~~vLT~~~K~~~dv~~~f~ 390 (960)
T KOG1189|consen 353 ---------KNSYALLLSDTVLVGEDPPAEVLTDSAKAVKDVSYFFK 390 (960)
T ss_pred ---------ccchhhhccceeeecCCCcchhhcccchhhcccceeec
Confidence 1235888999999999997 999999999998877775
No 30
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=4.1e-32 Score=267.70 Aligned_cols=188 Identities=24% Similarity=0.312 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCC
Q 011203 188 ELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDG 267 (491)
Q Consensus 188 EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~G 267 (491)
+|++||+|++|++++++.+.+.++||+||.||++.++..+.+. |. .++|++++++|. ..+||.+ ...+++.|++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~-g~-~~afp~~vs~n~--~~~H~~p-~~~d~~~l~~G 75 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIREL-GA-KPAFPCNISINE--VAAHYTP-SPGDERVFPEG 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CC-ccCCCCEEeeCC--CccCCCC-CCCCCcccCCC
Confidence 5899999999999999999999999999999999999988876 54 478888887655 4579865 22236889999
Q ss_pred CeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCC
Q 011203 268 DMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGN 347 (491)
Q Consensus 268 d~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~ 347 (491)
|+|.+|+|+.++||++|++||+++ | ++++++++++.+|++++++.+|||++++||+++++++++ +.|+.
T Consensus 76 DvV~iD~G~~~dGY~aD~arT~~v-G---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~----~~G~~--- 144 (291)
T PRK08671 76 DVVKLDLGAHVDGYIADTAVTVDL-G---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIR----SYGFK--- 144 (291)
T ss_pred CEEEEEEeEEECCEEEEEEEEEEe-C---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HcCCc---
Confidence 999999999999999999999999 6 588999999999999999999999999999999999874 56652
Q ss_pred hHHHHHhhcccccCccccccccCC-cccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 348 VDEMMAARLGAVFMPHGLGHFLGI-DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 348 ~~~~~~~~~~~~~~~h~~GH~iGl-~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
.+.|.+||+||+ .+|+.|.+| .+ ...++.+|+|||||+|||.+.
T Consensus 145 ------------~~~~~~GHgiG~~~~he~p~ip---------~~-~~~~~~~le~GmV~aIEp~~t 189 (291)
T PRK08671 145 ------------PIRNLTGHGLERYELHAGPSIP---------NY-DEGGGVKLEEGDVYAIEPFAT 189 (291)
T ss_pred ------------ccCCCcccCcCCCcccCCCccC---------cc-CCCCCceeCCCCEEEEcceEE
Confidence 235779999996 888866443 11 234578999999999999653
No 31
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.6e-31 Score=272.79 Aligned_cols=201 Identities=14% Similarity=0.116 Sum_probs=164.1
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---CCC-CCCCcceEEeeCCCCcccccCCC
Q 011203 181 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---GGC-RHCSYTCICATGENSAVLHYGHA 256 (491)
Q Consensus 181 R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~---~g~-~~~~~~~iv~sG~~~~~~h~~~~ 256 (491)
+..+|++||+.||+|++|+.++++.+.+.++||+|+.||++.++..+++. .|. .+.+|++.++ .|.+.+|+.+
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~vS--~N~~aaH~tP- 226 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGCS--LNHCAAHYTP- 226 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCceee--cCccccCCCC-
Confidence 34579999999999999999999999999999999999999887765432 244 3678887654 7888999765
Q ss_pred CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
...++++|++||+|.||+|+.++||++|++||+++ | ++++++++++++|+++++++++||++++||.++++++++
T Consensus 227 ~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevie- 301 (470)
T PTZ00053 227 NTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIE- 301 (470)
T ss_pred CCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-
Confidence 11136789999999999999999999999999988 5 789999999999999999999999999999999999985
Q ss_pred HHHhCCCccCChHHHHHhhccccc-----CccccccccCC-cccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECC
Q 011203 337 SLKKGGVMVGNVDEMMAARLGAVF-----MPHGLGHFLGI-DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEP 410 (491)
Q Consensus 337 ~l~~~G~~~~~~~~~~~~~~~~~~-----~~h~~GH~iGl-~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iep 410 (491)
+.|+- +...+ ..|.+||+||+ .+|+.+.+| .+ ...+..+|++||||+|||
T Consensus 302 ---s~G~e-----------~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP---------~v-~~~~~~~LeeGmVfaIEP 357 (470)
T PTZ00053 302 ---SYEVE-----------IKGKTYPIKSIRNLNGHSIGPYIIHGGKSVP---------IV-KGGENTRMEEGELFAIET 357 (470)
T ss_pred ---HcCCc-----------ccCcccccccccCCcccCCCCccccCCCcCC---------ee-CCCCCCEecCCCEEEEcc
Confidence 45651 01122 47999999997 899844322 11 123467999999999999
Q ss_pred ccc
Q 011203 411 GCY 413 (491)
Q Consensus 411 g~y 413 (491)
.+.
T Consensus 358 f~s 360 (470)
T PTZ00053 358 FAS 360 (470)
T ss_pred eee
Confidence 543
No 32
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=5e-31 Score=268.02 Aligned_cols=210 Identities=16% Similarity=0.143 Sum_probs=167.0
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---------CCCCCCCcceEEeeCCCCccc
Q 011203 181 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---------GGCRHCSYTCICATGENSAVL 251 (491)
Q Consensus 181 R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~---------~g~~~~~~~~iv~sG~~~~~~ 251 (491)
-.+|+++||+.||+|++|+.++++.+.+.++||+|+.||++..+..+.++ .+..+++|+++++ .|...+
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS--vN~~v~ 88 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS--VNNCVG 88 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--cCCeee
Confidence 46899999999999999999999999999999999999998776666542 1235678887776 789999
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCC-----CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Q 011203 252 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-----FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDM 326 (491)
Q Consensus 252 h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev 326 (491)
||.+....+++.|++||+|.+|+|+.++||++|++||++| |+ ++++++++++++++|++++++.+|||++++||
T Consensus 89 H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI 167 (389)
T TIGR00495 89 HFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQV 167 (389)
T ss_pred CCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 9764100124789999999999999999999999999999 64 57899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccC-CCCCCCCCCCCCCCCCcCcCCCCccCCCCE
Q 011203 327 HKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHD-PGGYPKGTERSKEPGLKSLRTVRELQERMV 405 (491)
Q Consensus 327 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he-~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv 405 (491)
+.+++++++ ++|+. -..+-+||+||..+|| .|.+++.+. +.......+..|++|||
T Consensus 168 ~~ai~~v~~----~~G~~---------------~v~~~~gH~igr~~~~g~~~Ii~~~~----~~~~~~~~~~~le~gev 224 (389)
T TIGR00495 168 TEAINKVAH----SYGCT---------------PVEGMLSHQLKQHVIDGEKVIISNPS----DSQKKDHDTAEFEENEV 224 (389)
T ss_pred HHHHHHHHH----HcCCe---------------ecCCceeecccceeccCCCeeeecCC----ccccCCCCCCEecCCCE
Confidence 999999974 56762 2344579999999998 443221110 00001124578999999
Q ss_pred EEECCcccccc
Q 011203 406 ITVEPGCYFID 416 (491)
Q Consensus 406 ~~iepg~y~~~ 416 (491)
|+|||.+....
T Consensus 225 ~aIEp~vs~G~ 235 (389)
T TIGR00495 225 YAVDILVSTGE 235 (389)
T ss_pred EEEeeeecCCC
Confidence 99999655443
No 33
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.98 E-value=6.7e-31 Score=259.09 Aligned_cols=186 Identities=20% Similarity=0.233 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCC
Q 011203 189 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 189 I~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 268 (491)
++.||+|++|++++++++.+.++||+||.||++.+++.+.+. |. .++|++.+ +.|...+||.+ ...++++|++||
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~-G~-~~afp~~i--s~n~~~~H~~p-~~~d~~~l~~GD 75 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIREL-GA-GPAFPVNL--SINECAAHYTP-NAGDDTVLKEGD 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc-CC-CCCCCcee--ccCCEeeCCCC-CCCCCcccCCCC
Confidence 368999999999999999999999999999999999888876 54 57787654 47788899875 222458899999
Q ss_pred eEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011203 269 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 348 (491)
Q Consensus 269 ~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~ 348 (491)
+|.+|+|+.++||++|++||+++ |+ .++++|+++++|++++++.+|||++++||+++++++++ +.|+.
T Consensus 76 vV~iD~G~~~dGY~sD~arT~~v-g~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~----~~G~~---- 143 (291)
T cd01088 76 VVKLDFGAHVDGYIADSAFTVDF-DP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIE----SYGFK---- 143 (291)
T ss_pred EEEEEEEEEECCEEEEEEEEEec-Ch---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH----HcCCE----
Confidence 99999999999999999999998 53 88899999999999999999999999999999999975 46662
Q ss_pred HHHHHhhcccccCccccccccC-CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcc
Q 011203 349 DEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGC 412 (491)
Q Consensus 349 ~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~ 412 (491)
-..|.+||+|| +.+|+.+.+| .+ ...++.+|+|||||+|||.+
T Consensus 144 -----------~~~~~~GHgig~~~~h~~~~ip---------~~-~~~~~~~le~gmV~aIEp~~ 187 (291)
T cd01088 144 -----------PIRNLTGHSIERYRLHAGKSIP---------NV-KGGEGTRLEEGDVYAIEPFA 187 (291)
T ss_pred -----------EeecCCccCccCccccCCCccC---------cc-CCCCCCEeCCCCEEEEceeE
Confidence 13578999999 5788754322 22 12346899999999999955
No 34
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.97 E-value=3.1e-30 Score=254.46 Aligned_cols=189 Identities=22% Similarity=0.296 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccC
Q 011203 186 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFE 265 (491)
Q Consensus 186 ~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~ 265 (491)
-+||+.||+|++|++++++.+.+.++||++|.||++.++..+.++ |+. .+|+++++ .|...+||.+ ..++++.|+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~-g~~-~aFp~~vs--~n~~~~H~~p-~~~d~~~l~ 76 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIREL-GAE-PAFPCNIS--INECAAHFTP-KAGDKTVFK 76 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCC-CCCCccee--cCCEeeCCCC-CCCcCccCC
Confidence 478999999999999999999999999999999999999888876 554 68888876 4777889876 223467899
Q ss_pred CCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCcc
Q 011203 266 DGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMV 345 (491)
Q Consensus 266 ~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~ 345 (491)
+||+|.+|+|+.++||++|++||+++ |. .++++|+++.+|++++++.+|||++++||+++++++++ +.|+.
T Consensus 77 ~GDvV~iD~G~~~dGY~aD~arT~~v-G~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~----~~G~~- 147 (295)
T TIGR00501 77 DGDVVKLDLGAHVDGYIADTAITVDL-GD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIE----SYGVK- 147 (295)
T ss_pred CCCEEEEEEeEEECCEEEEEEEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HcCCe-
Confidence 99999999999999999999999999 64 37899999999999999999999999999999999975 46652
Q ss_pred CChHHHHHhhcccccCccccccccC-CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcc
Q 011203 346 GNVDEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGC 412 (491)
Q Consensus 346 ~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~ 412 (491)
-+.|.+||++| +.+|+.+.+ |.+ ...++.+|++||||+|||.+
T Consensus 148 --------------~i~~~~GHgig~~~~h~g~~i---------p~i-~~~~~~~le~GmV~aIEP~~ 191 (295)
T TIGR00501 148 --------------PISNLTGHSMAPYRLHGGKSI---------PNV-KERDTTKLEEGDVVAIEPFA 191 (295)
T ss_pred --------------eecCCCCcceecccccCCCcc---------Cee-cCCCCCEeCCCCEEEEceeE
Confidence 23588999999 577764322 211 22346899999999999964
No 35
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.96 E-value=5.1e-29 Score=250.84 Aligned_cols=398 Identities=15% Similarity=0.135 Sum_probs=271.0
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCc-eeecCCCCCCEEEEEEeCCC
Q 011203 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF-AYLFGVREPGFYGAIDIATG 88 (491)
Q Consensus 10 ~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~-~YLtG~~~~~~~lvi~~~~g 88 (491)
..++.+.|.+|..-|+..|.+. ..+.|+++|+.|.. +...||+.+..+ .||.||++|.+++++. ++
T Consensus 4 ~~ide~~F~kR~~~l~~~~ne~----dG~p~sllv~lG~s-------~d~npyqk~taLh~wLLgYEFP~Tli~l~--~~ 70 (1001)
T COG5406 4 IRIDEERFEKRSRDLRKHLNEE----DGGPDSLLVMLGKS-------QDVNPYQKNTALHIWLLGYEFPETLIILD--DV 70 (1001)
T ss_pred ccccHHHHHHHHHHHHHhhhhc----cCCCceEEEEeccc-------cccChhhhhhHHHHHHHhccCcceEEEEe--cc
Confidence 4578899999999999999663 23448899999863 455688777765 4999999999987774 46
Q ss_pred eeEEeecCCCCccc---ccc--ccCCChhHHHHHhcCceecchhHHHHHHHh---cccCCCCCeEEEecCCCCCCCCC--
Q 011203 89 KSILFAPRLPPDYA---VWL--GKIKPLSYFQEKYMVNMVYYTDEIVGVLQG---HYKEPGKPLLFLLHGLNTDSNNF-- 158 (491)
Q Consensus 89 ~~~l~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~i~~~~g~~~~~~~~-- 158 (491)
+.++.+....+... ... +.+.....+.. ....++..+++.. .++. ..++||+.. .+.-.+.|
T Consensus 71 ~~~I~ts~~kA~~lqk~l~~~~~~~v~~n~~~r------~k~~eenkKlF~~~i~~i~s-~~k~VG~f~-kD~~qgkfi~ 142 (1001)
T COG5406 71 CTAITTSKKKAILLQKGLAETSLNIVVRNKDNR------TKNMEENKKLFKGSIYVIGS-ENKIVGDFC-KDVLQGKFIN 142 (1001)
T ss_pred eEEEEechhhHHHHHhhhccCcchhhhhhhhhc------ccCHHHHHHHHhhhheeccc-CCcccCccc-hhhhhccccc
Confidence 77777765543211 110 11111111111 1122333333332 2211 124454311 11112222
Q ss_pred CCccccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHH---c-cCC--CcHHHHHHHHHHHHHH
Q 011203 159 SKPAQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKK---T-RVG--MKEYQMESMFLHHTYM 229 (491)
Q Consensus 159 ~~~~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~---i-~~G--~tE~ei~a~~~~~~~~ 229 (491)
.|-.-|. ...+..|++--+..+-.+|+++||+.+|.+++.++..|....+. + ..+ +|...+...+...+-.
T Consensus 143 ew~~i~e~vk~efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~idd 222 (1001)
T COG5406 143 EWDSIFEPVKSEFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDD 222 (1001)
T ss_pred ccchhhhhhhhhcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcch
Confidence 2333332 23456788888999999999999999999999999998843322 2 122 3444444443332110
Q ss_pred ---------cCC-----CCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCC
Q 011203 230 ---------YGG-----CRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKF 295 (491)
Q Consensus 230 ---------~~g-----~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~ 295 (491)
..| .-.++|.||++||....+.- ++...++.+ .||+|++.+|.+|+|||++++||+++ .|
T Consensus 223 v~f~q~~s~~l~~~~~d~lew~ytpiiqsg~~~Dl~p---sa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~--dp 296 (1001)
T COG5406 223 VEFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSIDLTP---SAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT--DP 296 (1001)
T ss_pred hhhhhhcCccccccchhhhhhhcchhhccCceeeccc---ccccCchhh-cCceEEEEeeeeeccccccccceEEe--CC
Confidence 001 01478999999998764322 133345555 47899999999999999999999987 89
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccC
Q 011203 296 TSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHD 375 (491)
Q Consensus 296 ~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he 375 (491)
+.+|++.|+.++.+|+.++..+|||+..++||..+.+++...-.+.| .-|...+|-+||+++++
T Consensus 297 ~~e~~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~----------------pnF~~nvG~~igiefR~ 360 (1001)
T COG5406 297 DSEQQKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELG----------------PNFIYNVGLMIGIEFRS 360 (1001)
T ss_pred chHhhhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccC----------------chHhhhhhhhccccccc
Confidence 99999999999999999999999999999999999999864211211 24556789999999997
Q ss_pred CCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEe
Q 011203 376 PGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVT 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vt 455 (491)
.-. ..+..++++||.||+|.|.-|+-+ |+++.+. +.+++.+-||+-|+
T Consensus 361 s~~------------~~nvkn~r~lq~g~~fnis~gf~n---l~~~~~~-----------------Nnyal~l~dt~qi~ 408 (1001)
T COG5406 361 SQK------------PFNVKNGRVLQAGCIFNISLGFGN---LINPHPK-----------------NNYALLLIDTEQIS 408 (1001)
T ss_pred ccc------------ceeccCCceeccccEEEEeecccc---cCCCCcc-----------------cchhhhhccceEee
Confidence 321 124567899999999999998864 3333332 23588899999999
Q ss_pred CCCeeeCCCCCCCHHHHHHHHhCCCCC
Q 011203 456 ANGSKNMTSVPREISDIEAIMAGAPWP 482 (491)
Q Consensus 456 e~G~e~LT~~p~~~~~ie~~~~~~~~~ 482 (491)
-+.+.++|..|+.--+|.++++..+..
T Consensus 409 ls~p~~~t~~~kaq~~isf~fgedd~~ 435 (1001)
T COG5406 409 LSNPIVFTDSPKAQGDISFLFGEDDET 435 (1001)
T ss_pred cCCceecccCcccccceeEEecCCCCC
Confidence 888999999999999999999855543
No 36
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.1e-28 Score=247.41 Aligned_cols=360 Identities=23% Similarity=0.270 Sum_probs=245.6
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC--------EEEEE
Q 011203 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG--------FYGAI 83 (491)
Q Consensus 12 ~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~--------~~lvi 83 (491)
+.-.........|+++|++. +. +++ |+.+- ..+.||.+.+..+ .+++|
T Consensus 169 ~~G~~~~~Kv~~LR~~l~~~----~~--~a~-Vvs~L-----------------deIaWllNLRGsDipynPv~~sY~~i 224 (606)
T KOG2413|consen 169 FAGLSVDDKVDNLRKKLKEK----KC--DAF-VVTAL-----------------DEIAWLLNLRGSDIPYNPVFYSYAII 224 (606)
T ss_pred ccCcchhHHHHHHHHHHhhc----CC--cEE-ehhhH-----------------HHHHHHHhcccCcCCCCchhhhhhhh
Confidence 44455666778889999874 33 343 44332 1277988887544 22233
Q ss_pred EeCCCeeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccc
Q 011203 84 DIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQ 163 (491)
Q Consensus 84 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 163 (491)
...+..||+.........- ..+. ..++ .+.+.+++...++.........++.+ ..+.+.+. ...
T Consensus 225 --t~dei~lfvd~~k~~~~~~-------~~~~-~~~v-~i~pY~~i~~~i~~~~~~~~~~~i~i--a~~~~~~i---~~~ 288 (606)
T KOG2413|consen 225 --TMDEIFLFVDNSKLSDESK-------KHLR-EDGV-EIRPYDQIWSDIKNWASAFADKKIWI--SPETNYGI---GEL 288 (606)
T ss_pred --hhhhhheeecCcccCchhH-------HHHh-hCce-eeeeHHHHHHHHHHHhcccCceeEee--cccceeee---ccc
Confidence 2357888887643321110 0011 1122 23344445444444321111234433 21221111 001
Q ss_pred ccccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CcHHHHHHHHHHHHHHcCCCCCCC
Q 011203 164 FEFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVM----KKTRVG--MKEYQMESMFLHHTYMYGGCRHCS 237 (491)
Q Consensus 164 ~~~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~----~~i~~G--~tE~ei~a~~~~~~~~~~g~~~~~ 237 (491)
+ ..-........|..++++|...|++.||.|----..|+...+ +.+..| +||.+++..++..-.++.+..+.+
T Consensus 289 i-~~~~~~~~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglS 367 (606)
T KOG2413|consen 289 I-GEDHSMIDPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLS 367 (606)
T ss_pred c-cccccccccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcC
Confidence 1 001112234457799999999999999887544444444444 444566 899999999998877777888999
Q ss_pred cceEEee-CCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHH
Q 011203 238 YTCICAT-GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINA 316 (491)
Q Consensus 238 ~~~iv~s-G~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~ 316 (491)
|++|.+| |+|++++||.++ .-+++++.+..+.+||-|+.|.-=.+|+|||+.. |+||+++++.|..++..+-+..++
T Consensus 368 FeTIS~s~G~NgAviHYsP~-~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~VLkGhi~la~~ 445 (606)
T KOG2413|consen 368 FETISSSVGPNGAVIHYSPP-AETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTLVLKGHIALARA 445 (606)
T ss_pred cceeeccCCCCceeeecCCC-ccccceecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHHHHHhhhHhhhc
Confidence 9999977 999999999872 2246789999999999999999999999999998 999999999999999999999999
Q ss_pred hCC-CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC--CcccCCCCCCCCCCCCCCCCCcC
Q 011203 317 MKP-GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKS 393 (491)
Q Consensus 317 lkp-G~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~ 393 (491)
.-| |.....++..++.. |++.|+ .|.|++||||| |.+||.|.-. ++..
T Consensus 446 vFP~~t~g~~lD~laR~~----LW~~gL----------------Dy~HgTGHGVG~fLnVhE~P~~i---------s~r~ 496 (606)
T KOG2413|consen 446 VFPKGTKGSVLDALARSA----LWKAGL----------------DYGHGTGHGVGSFLNVHEGPIGI---------GYRP 496 (606)
T ss_pred ccCCCCCcchhHHHHHHH----HHhhcc----------------ccCCCCCcccccceEeccCCcee---------eeee
Confidence 988 78888888888776 467775 67899999999 9999966221 1111
Q ss_pred cCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCC----------eeeCC
Q 011203 394 LRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANG----------SKNMT 463 (491)
Q Consensus 394 ~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G----------~e~LT 463 (491)
..++.+|++||++++|||.|. .|.+|+|||+.+.|.+.+ .|.||
T Consensus 497 ~~~~~~l~ag~~~s~EPGYY~--------------------------dg~fGIRienv~~vvd~~~~~~~~~~L~fe~lT 550 (606)
T KOG2413|consen 497 YSSNFPLQAGMVFSIEPGYYK--------------------------DGEFGIRIENVVEVVDAGTKHNFRGFLTFEPLT 550 (606)
T ss_pred cCCCchhcCceEeccCCcccc--------------------------cCcceEEEeeEEEEEeccccccccceeeeccce
Confidence 235678999999999999996 577899999999987654 34566
Q ss_pred CCCCCH
Q 011203 464 SVPREI 469 (491)
Q Consensus 464 ~~p~~~ 469 (491)
-+|.+.
T Consensus 551 ~vP~q~ 556 (606)
T KOG2413|consen 551 LVPYQT 556 (606)
T ss_pred ecceec
Confidence 555443
No 37
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.81 E-value=3.1e-20 Score=161.58 Aligned_cols=117 Identities=38% Similarity=0.548 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEE-EeCCCee
Q 011203 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI-DIATGKS 90 (491)
Q Consensus 12 ~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi-~~~~g~~ 90 (491)
+|+++|++||++|.+.|++ ++++|+.|+....++ .|..|+|||++||+||||+++|++++++ ...+++.
T Consensus 1 i~~~~~~~RR~~l~~~l~~---------~~~vil~~~~~~~~~-~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~ 70 (134)
T PF05195_consen 1 IPAEEYAERRKKLAEKLPD---------NSIVILPGGPEKYRS-NDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKS 70 (134)
T ss_dssp -EHHHHHHHHHHHHHHSHS---------SEEEEEE----EEEE-TTEEE-----HHHHHHH---STT-EEEEEECTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCC---------CcEEEEECCCeeeec-CCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeE
Confidence 5789999999999999987 488999999999998 9999999999999999999999999888 5566799
Q ss_pred EEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhccc
Q 011203 91 ILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYK 138 (491)
Q Consensus 91 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 138 (491)
+||+|+.+...+.|.|.+.+.+++++.+++|++.+.+++.+.|.++++
T Consensus 71 ~LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~ 118 (134)
T PF05195_consen 71 TLFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLK 118 (134)
T ss_dssp EEEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHT
T ss_pred EEEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999998865
No 38
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.27 E-value=1e-10 Score=112.97 Aligned_cols=150 Identities=16% Similarity=0.188 Sum_probs=125.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcC---------CCCCCCcceEEeeCCCCccccc
Q 011203 183 FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG---------GCRHCSYTCICATGENSAVLHY 253 (491)
Q Consensus 183 vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~---------g~~~~~~~~iv~sG~~~~~~h~ 253 (491)
+-++.-+-.+|-|++|+.++++.+.+.+.||.+-.||...-...+.++- --.+.+||+.+. .|.+.+||
T Consensus 15 ia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is--vnncv~h~ 92 (398)
T KOG2776|consen 15 IANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS--VNNCVCHF 92 (398)
T ss_pred cccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--ccceeecc
Confidence 4456667889999999999999999999999999999876555553321 113578887776 68889999
Q ss_pred CCCCCCC-CCccCCCCeEEEEeceEeCceEeeeeeEEeeCCC-----CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Q 011203 254 GHAAAPN-DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-----FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMH 327 (491)
Q Consensus 254 ~~~~~p~-~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~ 327 (491)
.+ ...+ +..|+.||+|.||+|+.++||.+.++.|++| +. .+.+..++..+++-|.+++++.+|||.+-..|-
T Consensus 93 sP-lksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 93 SP-LKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred Cc-CCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 86 3333 6789999999999999999999999999999 43 457889999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 011203 328 KLAEKIILE 336 (491)
Q Consensus 328 ~~~~~~~~~ 336 (491)
+++.+.++.
T Consensus 171 ~~i~k~aas 179 (398)
T KOG2776|consen 171 RAIVKTAAS 179 (398)
T ss_pred HHHHHHHHH
Confidence 999988753
No 39
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.14 E-value=1.1e-09 Score=103.32 Aligned_cols=198 Identities=15% Similarity=0.135 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---cCCC-CCCCcceEEeeCCCCcccccCCCCCCCC
Q 011203 186 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---YGGC-RHCSYTCICATGENSAVLHYGHAAAPND 261 (491)
Q Consensus 186 ~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~---~~g~-~~~~~~~iv~sG~~~~~~h~~~~~~p~~ 261 (491)
.....-+|+|+.+..++-+.+...|+||||-.||...++...++ ++|. .+.+||+=++ -|.+..||++. .-..
T Consensus 82 ~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpN-aGd~ 158 (397)
T KOG2775|consen 82 SDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPN-AGDK 158 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCC-CCCc
Confidence 34457789999999999999999999999999999888876542 3333 2567776555 57788899872 2234
Q ss_pred CccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhC
Q 011203 262 RTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKG 341 (491)
Q Consensus 262 ~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~ 341 (491)
.+||.+|+..+|+|...+|--.|.+.|+.+ .+....+..++++|...+|+..---++.+||.++++++++..-.+.
T Consensus 159 tVLqydDV~KiDfGthi~GrIiDsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi 234 (397)
T KOG2775|consen 159 TVLKYDDVMKIDFGTHIDGRIIDSAFTVAF----NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEI 234 (397)
T ss_pred eeeeecceEEEeccccccCeEeeeeeEEee----CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEe
Confidence 689999999999999999999999999765 4667788999999999999999999999999999999986521121
Q ss_pred CCccCChHHHHHhhcccccCccccccccC-CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECC
Q 011203 342 GVMVGNVDEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEP 410 (491)
Q Consensus 342 G~~~~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iep 410 (491)
+=....++. ...-.||+|+ .-+|- |. ++|. ...+..+.+++|.+|+||.
T Consensus 235 ~Gk~~~VKp----------IrnLnGHSI~~yrIH~------gk---sVPi-Vkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 235 NGKTYQVKP----------IRNLNGHSIAQYRIHG------GK---SVPI-VKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred CCceeccee----------ccccCCCcccceEeec------Cc---ccce-ecCCcceeecCCeeEEEEe
Confidence 110011111 1112599998 33443 11 1221 1234568999999999986
No 40
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=98.48 E-value=3.8e-08 Score=85.19 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=73.2
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCC---CCCCEEEEEEeCCCeeEEeecC
Q 011203 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGV---REPGFYGAIDIATGKSILFAPR 96 (491)
Q Consensus 20 R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~---~~~~~~lvi~~~~g~~~l~~~~ 96 (491)
|++||++.|++. ++ |++++. ...|++||||| .....++++++.++. ++|++.
T Consensus 1 Rl~rl~~~m~~~----gi--d~lll~------------------~~~ni~YltG~~~~~~~~~~~l~i~~~~~-~l~~~~ 55 (132)
T PF01321_consen 1 RLERLRAAMAEA----GI--DALLLT------------------SPENIRYLTGFRWQPGERPVLLVITADGA-VLFVPK 55 (132)
T ss_dssp HHHHHHHHHHHT----T---SEEEEE------------------SHHHHHHHHS--ST-TSSEEEEEEESSSE-EEEEEG
T ss_pred CHHHHHHHHHHC----CC--CEEEEc------------------ChhhceEecCCCcCCCcceEEEEecccCc-EEEecc
Confidence 899999999985 67 665554 33579999999 555566665577787 999986
Q ss_pred CCCccc---c-ccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc---cccc
Q 011203 97 LPPDYA---V-WLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE---FETE 169 (491)
Q Consensus 97 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~---~~~~ 169 (491)
.+.... . +...+..+.. +.+.+.+.|++.+. ..++|++.. +..++.....+. .+.+
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~-----------~~~~~~~~l~~~~~--~~~~igve~----~~~~~~~~~~l~~~~~~~~ 118 (132)
T PF01321_consen 56 GEYERAAEESAPDDEVVEYED-----------PYEAIAEALKKLGP--EGKRIGVEP----DSLSAAEYQRLQEALPGAE 118 (132)
T ss_dssp GGHHHHHHHHTTSSEEEEEST-----------HHHHHHHHHHHHTT--TTSEEEEET----TTSBHHHHHHHHHHSTTSE
T ss_pred ccHHHHHHhhcCCceEEEEec-----------ccchHHHHHHHhCC--CCCEEEEcC----CcChHHHHHHHHHhCCCCE
Confidence 544311 1 1111111110 24567777877632 247887633 221211122222 3568
Q ss_pred ccchHHHHHHhHhc
Q 011203 170 LNTLHPILSECRVF 183 (491)
Q Consensus 170 ~~~~~~~i~~lR~v 183 (491)
++++++++.++|+|
T Consensus 119 ~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 119 FVDASPLIEELRMI 132 (132)
T ss_dssp EEEEHHHHHHHHTS
T ss_pred EEEcHHHHHHcCcC
Confidence 89999999999987
No 41
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=98.05 E-value=4.3e-06 Score=75.09 Aligned_cols=78 Identities=14% Similarity=0.214 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCC-ceeecCCCCCCEEEEEEeCCCee
Q 011203 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESY-FAYLFGVREPGFYGAIDIATGKS 90 (491)
Q Consensus 12 ~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~-~~YLtG~~~~~~~lvi~~~~g~~ 90 (491)
++.+.|.+|+++|++.|++.......+.|+++|+.|.. |...+|..... +.||+||++|+|++++++ .+.
T Consensus 1 iD~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~-------~e~~~Y~Ks~aLq~WLlGYEfpdTiiv~tk--~~i 71 (163)
T PF14826_consen 1 IDKETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKA-------DEDNPYSKSTALQTWLLGYEFPDTIIVFTK--KKI 71 (163)
T ss_dssp --HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S---------TTSTT-HHHHHHHHHHSS--SSEEEEEET--TEE
T ss_pred CCHHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCc-------ccCccchhHHHHHHHHhcccHhhhhhhhcC--CEE
Confidence 57889999999999999986322223458999998863 22334444444 469999999999998865 488
Q ss_pred EEeecCCC
Q 011203 91 ILFAPRLP 98 (491)
Q Consensus 91 ~l~~~~~~ 98 (491)
++++....
T Consensus 72 ~~ltS~KK 79 (163)
T PF14826_consen 72 HFLTSKKK 79 (163)
T ss_dssp EEEEEHHH
T ss_pred EEEeCHHH
Confidence 88887543
No 42
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.75 E-value=0.011 Score=60.80 Aligned_cols=120 Identities=17% Similarity=0.265 Sum_probs=77.6
Q ss_pred ceEeeeeeEEeeCCCCC--HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcc
Q 011203 280 FYGSDITCSFPVNGKFT--SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLG 357 (491)
Q Consensus 280 gY~sd~tRt~~v~G~~~--~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 357 (491)
..++++.|+..| ..+. +.+|++.+.+.++++++++.+|||++-.||..++++.+. +.|..+. +..
T Consensus 126 ~~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~----~~Ga~ps--------~l~ 192 (396)
T PLN03158 126 EPNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATI----AAGGYPS--------PLN 192 (396)
T ss_pred ccccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH----HcCCccc--------ccc
Confidence 445677777777 4544 457889999999999999999999999999999987753 3442110 000
Q ss_pred cccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchh
Q 011203 358 AVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVI 437 (491)
Q Consensus 358 ~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~ 437 (491)
...|+..+ ..|+. +. +..| ..++++|++|+++.++.|.+.
T Consensus 193 y~~fp~sv--cts~N--~~--i~Hg-----------ip~~r~L~~GDiV~iDvg~~~----------------------- 232 (396)
T PLN03158 193 YHFFPKSC--CTSVN--EV--ICHG-----------IPDARKLEDGDIVNVDVTVYY----------------------- 232 (396)
T ss_pred ccCCCcee--eeccc--cc--ccCC-----------CCCCccCCCCCEEEEEEeEEE-----------------------
Confidence 01122211 12221 10 0001 124678999999999999875
Q ss_pred cccCCcceeEEceEEEEeC
Q 011203 438 GRFKDFGGVRIESDVLVTA 456 (491)
Q Consensus 438 ~~~~g~ggvried~v~Vte 456 (491)
.|+ ..-+..|++|++
T Consensus 233 ---~GY-~aD~tRT~~VG~ 247 (396)
T PLN03158 233 ---KGC-HGDLNETFFVGN 247 (396)
T ss_pred ---CCE-EEeEEeEEEcCC
Confidence 454 457899999864
No 43
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.49 E-value=0.027 Score=53.96 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV 343 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~ 343 (491)
+.+|++.+.+.++++++++.++||++-.||..++.+.+ .+.|.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~----~~~G~ 44 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFI----EEHGA 44 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH----HHcCC
Confidence 45789999999999999999999999999998887765 44554
No 44
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.36 E-value=0.018 Score=55.37 Aligned_cols=87 Identities=14% Similarity=0.263 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC-CcccCC
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG-IDTHDP 376 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he~ 376 (491)
.+|++-+..+++++.+..++|||+|-.||++++++.+- ++|--++ ..+...||.++--++- .-.|-
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~I----erg~YPS--------PLnYy~FPKS~CTSVNEviCHG- 190 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAII----ERGAYPS--------PLNYYGFPKSVCTSVNEVICHG- 190 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHH----hcCCcCC--------CcccCCCchhhhcchhheeecC-
Confidence 46778888999999999999999999999999998763 4554332 1223356666554443 22221
Q ss_pred CCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 377 GGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
+| +.++||.|..++|...+|.
T Consensus 191 --IP---------------D~RpLedGDIvNiDVtvY~ 211 (369)
T KOG2738|consen 191 --IP---------------DSRPLEDGDIVNIDVTVYL 211 (369)
T ss_pred --CC---------------CcCcCCCCCEEeEEEEEEe
Confidence 21 4579999999999999986
No 45
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.00 E-value=0.21 Score=49.52 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCC---C-CCCCCCccCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGH---A-AAPNDRTFEDG 267 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~---~-~~p~~~~l~~G 267 (491)
.++..+++..+++++++.++||++-.||..++...+.+. |+... ...+.-|-....+|... . ...++.+|++|
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~-G~~~i--~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~G 182 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESY-GVKPI--SNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEG 182 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCeee--cCCCCcceecccccCCCccCeecCCCCCEeCCC
Confidence 366777888889999999999999999999998887764 54321 11111111101122110 0 01135689999
Q ss_pred CeEEEEeceEe-CceEeeeeeEEe
Q 011203 268 DMALLDMGAEY-QFYGSDITCSFP 290 (491)
Q Consensus 268 d~v~~D~g~~~-~gY~sd~tRt~~ 290 (491)
+++.++.+... .|+..+-.+|-.
T Consensus 183 mV~aIEP~~~~G~G~v~~~~~~~i 206 (295)
T TIGR00501 183 DVVAIEPFATDGVGYVTDGGEVSI 206 (295)
T ss_pred CEEEEceeEECCcCeEecCCCeEE
Confidence 99999987653 577777766543
No 46
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.84 E-value=0.058 Score=51.83 Aligned_cols=89 Identities=20% Similarity=0.253 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCC
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPG 377 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~ 377 (491)
..|++-+.+.++++.+.+.++||++..||.+.+++++.+ .|..+. ...-+++...+.+.+-|.-
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~----~ga~pa------------~~gy~g~~~~~ciSvNe~v 76 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIRE----KGAYPA------------FLGYKGFPFPTCISVNEVV 76 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH----cCceeh------------hccCcCCCcceEeehhhee
Confidence 467777888889999999999999999999999999853 454321 1112223455555555421
Q ss_pred CCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 378 GYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
..| .+.++.+|++|.++.|..|..+
T Consensus 77 --~Hg----------iP~d~~vlk~GDiv~IDvg~~~ 101 (255)
T COG0024 77 --AHG----------IPGDKKVLKEGDIVKIDVGAHI 101 (255)
T ss_pred --eec----------CCCCCcccCCCCEEEEEEEEEE
Confidence 001 1125789999999999999876
No 47
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=95.71 E-value=0.089 Score=52.14 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~ 41 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRE 41 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999887643
No 48
>PRK05716 methionine aminopeptidase; Validated
Probab=95.19 E-value=0.17 Score=48.78 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
.+|++.+.+.++++++++.++||++..||..++...+.
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~ 50 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIR 50 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998877653
No 49
>PRK12896 methionine aminopeptidase; Reviewed
Probab=95.11 E-value=0.16 Score=49.19 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=39.6
Q ss_pred eeEEeeCCCCCH--HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 286 TCSFPVNGKFTS--DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 286 tRt~~v~G~~~~--~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
.|++.| ..+.+ ..|++.+.+.++.+++++.++||++-.||...+...+.
T Consensus 5 ~~~~~v-Ks~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~ 55 (255)
T PRK12896 5 GRGMEI-KSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLE 55 (255)
T ss_pred CCceeE-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 578777 34333 46788889999999999999999999999998877653
No 50
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=94.78 E-value=0.28 Score=50.61 Aligned_cols=40 Identities=20% Similarity=0.299 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILES 337 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~ 337 (491)
..|++-+.+.++++.+++.++||++..||.+.+.+.+.+.
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~ 60 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEE 60 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHh
Confidence 4677888888999999999999999999999999888653
No 51
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=94.38 E-value=0.58 Score=42.99 Aligned_cols=99 Identities=15% Similarity=0.079 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCC-CCCCCCccCCCC
Q 011203 190 ALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA-AAPNDRTFEDGD 268 (491)
Q Consensus 190 ~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~-~~p~~~~l~~Gd 268 (491)
..++++.+.+..+++.+++.++||++-.||..++...+.++ |.. ..+...+.-|..-. .|-.+. ...++.+|++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~-g~~-~~~~~~~Gh~iG~~-~~e~~~~~~~~~~~l~~gm 178 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEH-GLG-PNFGHRTGHGIGLE-IHEPPVLKAGDDTVLEPGM 178 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-Ccc-ccCCCCCccccCcc-cCCCCCcCCCCCCCcCCCC
Confidence 46788889999999999999999999999999998888765 542 01111122111111 121110 011467899999
Q ss_pred eEEEEeceEeC-ceEeeeeeEEee
Q 011203 269 MALLDMGAEYQ-FYGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~~~-gY~sd~tRt~~v 291 (491)
++.++.+.... ++..-+.-|++|
T Consensus 179 v~~iep~~~~~~~~g~~~ed~v~v 202 (207)
T cd01066 179 VFAVEPGLYLPGGGGVRIEDTVLV 202 (207)
T ss_pred EEEECCEEEECCCcEEEeeeEEEE
Confidence 99999998876 588888888887
No 52
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=92.78 E-value=1.3 Score=46.52 Aligned_cols=88 Identities=16% Similarity=0.149 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCC
Q 011203 299 QSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGG 378 (491)
Q Consensus 299 ~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~ 378 (491)
.|++-+.+.++.+.+.+.++||++..||.+.++..+.+...+.|... ..-||. ++++. +..++
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~------------g~aFPt----~vS~N-~~aaH 223 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC------------GWAFPT----GCSLN-HCAAH 223 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc------------cCCCCc----eeecC-ccccC
Confidence 56777778888888899999999999999998887765434444310 011232 22322 11122
Q ss_pred CCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 379 YPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
+.+ ...++++|++|.++.|+.|...
T Consensus 224 ~tP-----------~~gd~~vLk~GDvVkID~G~~v 248 (470)
T PTZ00053 224 YTP-----------NTGDKTVLTYDDVCKLDFGTHV 248 (470)
T ss_pred CCC-----------CCCCCcEecCCCeEEEEEeEEE
Confidence 211 1224678999999999998764
No 53
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=92.65 E-value=1.3 Score=42.03 Aligned_cols=40 Identities=28% Similarity=0.292 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILES 337 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~ 337 (491)
..|++-+.+.++++.+++.++||++-.||...+++.+.+.
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~ 42 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEE 42 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHh
Confidence 5788999999999999999999999999998888877653
No 54
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=91.77 E-value=2.4 Score=39.20 Aligned_cols=98 Identities=15% Similarity=0.116 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCC-CCCCCccCCCCe
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAA-APNDRTFEDGDM 269 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~-~p~~~~l~~Gd~ 269 (491)
.++++.+.+.++++.+++.++||++-.||.+.+...+.+. |... .|...+.-|... ..|-.+.. ..++..|++|.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~-g~~~-~~~~~~Gh~iG~-~~~e~p~i~~~~~~~l~~gmv 180 (208)
T cd01092 104 ELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEA-GYGE-YFIHRTGHGVGL-EVHEAPYISPGSDDVLEEGMV 180 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-Cccc-cCCCCCccccCc-ccCcCCCcCCCCCCCcCCCCE
Confidence 4567888888999999999999999999999888887765 5421 121111111110 11211100 115678999999
Q ss_pred EEEEeceEeCc-eEeeeeeEEee
Q 011203 270 ALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 270 v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
+.++.+....| +..-+.-|+.|
T Consensus 181 ~~iep~~~~~~~~g~~~ed~v~v 203 (208)
T cd01092 181 FTIEPGIYIPGKGGVRIEDDVLV 203 (208)
T ss_pred EEECCeEEecCCCEEEeeeEEEE
Confidence 99998876543 34556777776
No 55
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=91.50 E-value=2.4 Score=40.70 Aligned_cols=95 Identities=8% Similarity=0.146 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCC------CCcccccCCCCCCCCCccC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE------NSAVLHYGHAAAPNDRTFE 265 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~------~~~~~h~~~~~~p~~~~l~ 265 (491)
.+++.+++..+++++++.++||++-.|+..++.+.+.+. |.... ...+.-|. ...++++.. ..++.+|+
T Consensus 118 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~-g~~~~--~~~~GHgiG~~~~e~p~i~~~~~--~~~~~~l~ 192 (247)
T TIGR00500 118 AEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAK-GFSVV--REYCGHGIGRKFHEEPQIPNYGK--KFTNVRLK 192 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEec--cCccCCccCcccCCCCccCCcCc--CCCCCEec
Confidence 456777778888999999999999999999988887765 53211 01111111 111111110 11367899
Q ss_pred CCCeEEEEeceEe------------------CceEeeeeeEEee
Q 011203 266 DGDMALLDMGAEY------------------QFYGSDITCSFPV 291 (491)
Q Consensus 266 ~Gd~v~~D~g~~~------------------~gY~sd~tRt~~v 291 (491)
+|.++.++.+..+ +++..-+.-|+.|
T Consensus 193 ~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~V 236 (247)
T TIGR00500 193 EGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVI 236 (247)
T ss_pred CCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEE
Confidence 9999999987654 3456667778887
No 56
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=90.23 E-value=2.9 Score=40.20 Aligned_cols=99 Identities=17% Similarity=0.098 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-CcceEEeeCCCCcccccCCC--CCCCCCccCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGENSAVLHYGHA--AAPNDRTFEDG 267 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~-~~~~iv~sG~~~~~~h~~~~--~~p~~~~l~~G 267 (491)
..+++.+++.++.+++++.+|||++-.++..+....+.+. +.... .|..-++.|.--. .|-.+. ..-++++|++|
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~-~~~~~~~~~~~~GHgiGle-~hE~~~~l~~~~~~~L~~G 197 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK-KPELEPNFTKNLGFGIGLE-FRESSLIINAKNDRKLKKG 197 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh-ChhHHHhCcCCcccccCcc-cccCccccCCCCCCCcCCC
Confidence 4566788888899999999999999999998888777654 31111 1111111111100 010000 01146789999
Q ss_pred CeEEEEeceE-e----------CceEeeeeeEEee
Q 011203 268 DMALLDMGAE-Y----------QFYGSDITCSFPV 291 (491)
Q Consensus 268 d~v~~D~g~~-~----------~gY~sd~tRt~~v 291 (491)
.++.+..|.. . +.|..-++-|+.|
T Consensus 198 Mvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~V 232 (243)
T cd01091 198 MVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILV 232 (243)
T ss_pred CEEEEeCCcccccCccccCccCCeeEEEEEEEEEE
Confidence 9999999975 2 3688889999988
No 57
>PRK08671 methionine aminopeptidase; Provisional
Probab=90.11 E-value=4.7 Score=39.86 Aligned_cols=97 Identities=15% Similarity=0.082 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCC----CCCCCCccCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA----AAPNDRTFEDG 267 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~----~~p~~~~l~~G 267 (491)
.+++.+.+..+++.+++.++||++-.||.+.++..+.+. |+... ...+.-|-.-...|-... ...++.+|++|
T Consensus 103 ~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~-G~~~~--~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~G 179 (291)
T PRK08671 103 YEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSY-GFKPI--RNLTGHGLERYELHAGPSIPNYDEGGGVKLEEG 179 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccc--CCCcccCcCCCcccCCCccCccCCCCCceeCCC
Confidence 356777777889999999999999999999988887764 54321 111111111111221110 01146789999
Q ss_pred CeEEEEeceE-eCceEeeeeeEEee
Q 011203 268 DMALLDMGAE-YQFYGSDITCSFPV 291 (491)
Q Consensus 268 d~v~~D~g~~-~~gY~sd~tRt~~v 291 (491)
+++.++.+.. -.|+..+-.||-..
T Consensus 180 mV~aIEp~~t~G~G~v~~~~~~~iy 204 (291)
T PRK08671 180 DVYAIEPFATDGEGKVVEGPEVEIY 204 (291)
T ss_pred CEEEEcceEECCCCeEecCCceEEE
Confidence 9999998866 36788887777654
No 58
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=89.81 E-value=3.5 Score=42.66 Aligned_cols=98 Identities=17% Similarity=0.161 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCC---CCCC-CCCccCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGH---AAAP-NDRTFED 266 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~---~~~p-~~~~l~~ 266 (491)
.++++.+++.++.+++++.++||++-.||.++....+.+. |....... =-.-|-.. .+++.. .-.| ++.+|++
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~-G~~~~h~~-GhgiGl~~-~~~~~e~~~~l~~~~~~~L~~ 347 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKY-GIHKDSRT-GYPIGLSY-PPDWGERTMSLRPGDNTVLKP 347 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccCCCc-eeeeccCc-CCCCCCccccccCCCCceecC
Confidence 3567788889999999999999999999999888877664 54321000 00112111 011100 0111 4678999
Q ss_pred CCeEEEEeceEeCceEeeeeeEEee
Q 011203 267 GDMALLDMGAEYQFYGSDITCSFPV 291 (491)
Q Consensus 267 Gd~v~~D~g~~~~gY~sd~tRt~~v 291 (491)
|-++.++-|.-..|+..-+.-|++|
T Consensus 348 GMv~tvEpgiy~~~~Gvried~v~V 372 (391)
T TIGR02993 348 GMTFHFMTGLWMEDWGLEITESILI 372 (391)
T ss_pred CCEEEEcceeEeCCCCeEEeeEEEE
Confidence 9999999988777766677788888
No 59
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=89.81 E-value=4.9 Score=38.19 Aligned_cols=96 Identities=10% Similarity=-0.019 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCc-ccccCCC------CCCCCCcc
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA-VLHYGHA------AAPNDRTF 264 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~-~~h~~~~------~~p~~~~l 264 (491)
.|++.+++..+++++++.++||++-.||.+++...+.++ |.... +. ...|..-. ..|..+. ...++.+|
T Consensus 111 ~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~-G~~~~-~~--~~~GHgiGl~~he~~~~~g~~~~~~~~~~L 186 (228)
T cd01090 111 HLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREH-DLLRY-RT--FGYGHSFGVLSHYYGREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCcc-cc--cccCcccccccccCCCccccccCCCCCCcc
Confidence 567788888999999999999999999999998888765 53321 00 01111110 1121100 01145789
Q ss_pred CCCCeEEEEeceEeC----c-eEeeeeeEEee
Q 011203 265 EDGDMALLDMGAEYQ----F-YGSDITCSFPV 291 (491)
Q Consensus 265 ~~Gd~v~~D~g~~~~----g-Y~sd~tRt~~v 291 (491)
++|.++.++-+..+. | ...-+..|+.|
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~V 218 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVI 218 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEE
Confidence 999999999987652 2 23347778777
No 60
>PRK12897 methionine aminopeptidase; Reviewed
Probab=89.21 E-value=4.4 Score=38.96 Aligned_cols=96 Identities=7% Similarity=0.017 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCC----C-CCCCCccCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA----A-APNDRTFED 266 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~----~-~p~~~~l~~ 266 (491)
.+++.+++..+++.+++.++||++-.|+..++...+.+. |... +...+.-|... ..|-.+. . ..+..+|++
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~-g~~~--~~~~~GHgiGl-~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANE-GFSV--ARDFTGHGIGK-EIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHc-CCcc--CCCeEECccCC-cccCCCccCCCCCCCCCCCcCC
Confidence 456667777888999999999999999998888877765 5431 12222222211 1121110 0 113468999
Q ss_pred CCeEEEEeceEe-----------------Cc-eEeeeeeEEee
Q 011203 267 GDMALLDMGAEY-----------------QF-YGSDITCSFPV 291 (491)
Q Consensus 267 Gd~v~~D~g~~~-----------------~g-Y~sd~tRt~~v 291 (491)
|.++.+.-|... +| +..-+.-|+.|
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~V 237 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAI 237 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEE
Confidence 999999988752 34 67777788877
No 61
>PRK12318 methionine aminopeptidase; Provisional
Probab=88.52 E-value=4.6 Score=39.99 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCC------CcccccCCCCCCCCCcc
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGEN------SAVLHYGHAAAPNDRTF 264 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~------~~~~h~~~~~~p~~~~l 264 (491)
.+|++.+++.++++++++.++||++-.+|..++...+.+. |..... ..+.-|.- ..++++.. -++.+|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~-G~~~~~--~~~GHgIGl~~hE~P~i~~~~~---~~~~~L 232 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKY-GFSVVD--QFVGHGVGIKFHENPYVPHHRN---SSKIPL 232 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCC--CcccCCcCccccCCCcccCcCC---CCCCEe
Confidence 3567788888899999999999999999999988887765 543110 11111111 11111110 134679
Q ss_pred CCCCeEEEEeceEe
Q 011203 265 EDGDMALLDMGAEY 278 (491)
Q Consensus 265 ~~Gd~v~~D~g~~~ 278 (491)
++|.++.++-+...
T Consensus 233 ~~GMV~~iEP~i~~ 246 (291)
T PRK12318 233 APGMIFTIEPMINV 246 (291)
T ss_pred CCCCEEEECCEEEc
Confidence 99999999877654
No 62
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=88.45 E-value=2.7 Score=41.92 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCC-
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDP- 376 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~- 376 (491)
..|.+-+.+..+.+.+++.++||++..||....-..|.+...+ +.... +-+-.|+....-+.+..+
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~k---iYK~e----------K~~~KGIAfPT~Isvnncv 89 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGK---IYKKE----------KDFEKGIAFPTSISVNNCV 89 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHH---HHhhh----------hhhhccccccceeccccee
Confidence 4566778889999999999999999999999988887653321 00000 112223333333333331
Q ss_pred CCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeC
Q 011203 377 GGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTA 456 (491)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte 456 (491)
.+|.+.. + ..+..|++|.|+-|..|+.+ +|+ -.-+.+|++|++
T Consensus 90 ~h~sPlk---s-------d~~~~Lk~GDvVKIdLG~Hi--------------------------DGf-iA~vaHT~VV~~ 132 (398)
T KOG2776|consen 90 CHFSPLK---S-------DADYTLKEGDVVKIDLGVHI--------------------------DGF-IALVAHTIVVGP 132 (398)
T ss_pred eccCcCC---C-------CCcccccCCCEEEEEeeeee--------------------------ccc-eeeeeeeEEecc
Confidence 1222111 0 12678999999999999986 344 667899999986
Q ss_pred CCeeeCCC
Q 011203 457 NGSKNMTS 464 (491)
Q Consensus 457 ~G~e~LT~ 464 (491)
.---.+|+
T Consensus 133 ~~~~~vtG 140 (398)
T KOG2776|consen 133 APDTPVTG 140 (398)
T ss_pred CCCCcccC
Confidence 43334443
No 63
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=87.64 E-value=8.5 Score=35.59 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEE--eeCCCCc--ccccCCCCCCCCCccCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENSA--VLHYGHAAAPNDRTFEDG 267 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv--~sG~~~~--~~h~~~~~~p~~~~l~~G 267 (491)
.+++.+.+..+++.+++.++||++-.||.+++.+.+.+. |.. ..++..+ +-|.... .|.... .-++.+|++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~-g~~-~~~~~~~GH~iG~~~~~~~P~i~~--~~~~~~l~~g 179 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEY-GLE-EPYPHGLGHGIGLEFHEPGPNIAR--PGDDTVLEPG 179 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHT-TEG-EEBTSSSEEEESSSSSEEEEEESS--TTTSSB--TT
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhh-ccc-ceeeecccccccccccccceeeec--ccccceecCC
Confidence 677778888899999999999999999999999888875 541 1111111 1121111 122110 1157799999
Q ss_pred CeEEEEeceE-eCce-EeeeeeEEee
Q 011203 268 DMALLDMGAE-YQFY-GSDITCSFPV 291 (491)
Q Consensus 268 d~v~~D~g~~-~~gY-~sd~tRt~~v 291 (491)
-++.++.+.. ..|. ..-+.-|+.|
T Consensus 180 mv~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 180 MVFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp BEEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred CceeEeeeEEccCCCcEEEEEEEEEE
Confidence 9999999765 3333 6666666655
No 64
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=86.89 E-value=7.4 Score=37.16 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
+..|++.+.+.++.+++++.++||++-.||...+.+.+.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~ 40 (243)
T cd01087 2 ELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFR 40 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999877653
No 65
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=86.16 E-value=5.1 Score=39.04 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCC
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDP 376 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~ 376 (491)
.+.|++.++=+++...+...+|||++.-||.+..+...++-+.+.|+. -++|+..|+...-+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~------------------aGi~FPtG~SlN~c 147 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN------------------AGIGFPTGCSLNHC 147 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc------------------ccccCCCcccccch
Confidence 456777888888889999999999999999999988776544555541 23455555443322
Q ss_pred -CCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccc
Q 011203 377 -GGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 415 (491)
Q Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~ 415 (491)
.+|. +++.+.++|+.+.|.-|.-|..+.
T Consensus 148 AAHyT-----------pNaGd~tVLqydDV~KiDfGthi~ 176 (397)
T KOG2775|consen 148 AAHYT-----------PNAGDKTVLKYDDVMKIDFGTHID 176 (397)
T ss_pred hhhcC-----------CCCCCceeeeecceEEEecccccc
Confidence 1222 234567899999999998887653
No 66
>PRK07281 methionine aminopeptidase; Reviewed
Probab=84.61 E-value=11 Score=37.06 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCc------ccccCCCCCCCCCccC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA------VLHYGHAAAPNDRTFE 265 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~------~~h~~~~~~p~~~~l~ 265 (491)
.+++.+++..+++++++.++||++-.+|..++...+.+. |... +...+.-|.--. ++++.. ..++.+|+
T Consensus 150 ~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~-G~~~--~~~~~GHGIGl~~hE~P~i~~~~~--~~~~~~Le 224 (286)
T PRK07281 150 VKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESR-GYGV--VRDLVGHGVGPTMHEEPMVPNYGT--AGRGLRLR 224 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCcc--CCCeeeeeCCCccCCCCcCCCccc--CCCCCEEC
Confidence 577888899999999999999999999999888777654 4431 211222221110 111110 01356899
Q ss_pred CCCeEEEEeceEe
Q 011203 266 DGDMALLDMGAEY 278 (491)
Q Consensus 266 ~Gd~v~~D~g~~~ 278 (491)
+|.++.++-+...
T Consensus 225 ~GMV~tiEPgiy~ 237 (286)
T PRK07281 225 EGMVLTIEPMINT 237 (286)
T ss_pred CCCEEEECCeeEc
Confidence 9999999988854
No 67
>PRK14576 putative endopeptidase; Provisional
Probab=83.34 E-value=13 Score=38.76 Aligned_cols=99 Identities=14% Similarity=-0.013 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCC-cccccCCCCC-CCCCccCCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS-AVLHYGHAAA-PNDRTFEDGD 268 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~-~~~h~~~~~~-p~~~~l~~Gd 268 (491)
..+++.+++.++.+++++++|||++-.|+..++...+.+. |.... +...+.-|.-. .-.|..+.-. .++.+|++|.
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GM 362 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTS-GLPHY-NRGHLGHGDGVFLGLEEVPFVSTQATETFCPGM 362 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCC
Confidence 4667788888999999999999999999999888877665 54311 10001111000 0001111011 1467899999
Q ss_pred eEEEEeceEeCc-eEeeeeeEEee
Q 011203 269 MALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
++.++.+....| ...-+.-|+.|
T Consensus 363 v~~vEp~~y~~g~ggvriEDtvlV 386 (405)
T PRK14576 363 VLSLETPYYGIGVGSIMLEDMILI 386 (405)
T ss_pred EEEECCceeecCCCEEEEeeEEEE
Confidence 999987654333 34446778877
No 68
>PRK09795 aminopeptidase; Provisional
Probab=82.27 E-value=17 Score=37.02 Aligned_cols=103 Identities=14% Similarity=0.065 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCC-CCCCCcc
Q 011203 186 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAA-APNDRTF 264 (491)
Q Consensus 186 ~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~-~p~~~~l 264 (491)
+.+-+.++++.+++..+.+++++.++||++-.||.++....+.+. |... .|..-+.-|..- ..|-.+.- ..++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~-g~~~-~~~h~~GHgiGl-~~he~p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEA-GYGD-YFGHNTGHAIGI-EVHEDPRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCc-cCCCCCCccCCc-cccCCCCcCCCCCCCc
Confidence 444456788899999999999999999999999999988887765 4321 111111111111 11211101 1146789
Q ss_pred CCCCeEEEEeceEeCc-eEeeeeeEEee
Q 011203 265 EDGDMALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 265 ~~Gd~v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
++|.++.++-|.-..| ...-+.-|++|
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 9999999998876544 24456677777
No 69
>PRK15173 peptidase; Provisional
Probab=81.75 E-value=16 Score=36.78 Aligned_cols=99 Identities=11% Similarity=0.044 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCC-cccccCCCC-CCCCCccCCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS-AVLHYGHAA-APNDRTFEDGD 268 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~-~~~h~~~~~-~p~~~~l~~Gd 268 (491)
..|++.+++.++++++++.++||++-.+|.++....+.+. |.... +...+.-|.-. .-.|..+.. ..++.+|++|.
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GM 280 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRGHLGHGNGVFLGLEESPFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCC
Confidence 4567788888999999999999999999999888777665 54311 10011111110 001211101 12467899999
Q ss_pred eEEEEeceE-eCceEeeeeeEEee
Q 011203 269 MALLDMGAE-YQFYGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~-~~gY~sd~tRt~~v 291 (491)
++.++.|.- .+.+..-+.-|+.|
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlV 304 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILI 304 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEE
Confidence 999998864 33344667888888
No 70
>PRK14575 putative peptidase; Provisional
Probab=81.39 E-value=16 Score=37.99 Aligned_cols=99 Identities=10% Similarity=0.006 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCC-cccccCCCCC-CCCCccCCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS-AVLHYGHAAA-PNDRTFEDGD 268 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~-~~~h~~~~~~-p~~~~l~~Gd 268 (491)
..+++.+++..+.+++++.++||++-.++.+++...+.+. |.... +...+.-|.-. .-.|..+... -++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~-G~~~~-~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRGHLGHGNGVFLGLEESPFVSTHATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCCCCCCcccCCCCCccCCCCCCCCCCCcCCCC
Confidence 3467777888999999999999999999999988877765 54311 10000100000 0011111011 1467899999
Q ss_pred eEEEEeceEe-CceEeeeeeEEee
Q 011203 269 MALLDMGAEY-QFYGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~~-~gY~sd~tRt~~v 291 (491)
++.++.|.-. +.+..-+.-|+.|
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlV 387 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILI 387 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEE
Confidence 9999988753 3345667888888
No 71
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=80.91 E-value=10 Score=35.89 Aligned_cols=39 Identities=8% Similarity=-0.071 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHHH
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPG--VCWVDMHKLAEKIIL 335 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG--~~~~ev~~~~~~~~~ 335 (491)
..+.+.-..+.++.+.+.+.++|| ++-.||.+.+.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~ 44 (224)
T cd01085 4 AAHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRR 44 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHH
Confidence 345555566678889999999999 999999999987653
No 72
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=78.84 E-value=20 Score=36.83 Aligned_cols=98 Identities=16% Similarity=0.074 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCC-CcccccCC-CCCC-CCCccCCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGEN-SAVLHYGH-AAAP-NDRTFEDGD 268 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~-~~~~h~~~-~~~p-~~~~l~~Gd 268 (491)
.|+...++.+++++++++++||++-.++.+.....+.+. |.. ..|..-..-|.. ....|-.+ ...| ++..|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~-g~~-~~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKA-GYG-LYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhc-CCc-ccccCCccccCCCCcccCcCccccCCCCCccccCCc
Confidence 357788888999999999999999999999888888764 322 111111111111 01112111 0112 467899999
Q ss_pred eEEEEeceE-eCceEeeeeeEEee
Q 011203 269 MALLDMGAE-YQFYGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~-~~gY~sd~tRt~~v 291 (491)
++.++-|.. .+.+..-+.-+++|
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlV 365 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLV 365 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEE
Confidence 999999965 46799999999999
No 73
>PRK10879 proline aminopeptidase P II; Provisional
Probab=72.18 E-value=33 Score=36.04 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
..|++.+.+.++..++++.++||++=.||...+...+
T Consensus 181 ~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~ 217 (438)
T PRK10879 181 VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEF 217 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 3567777888888999999999999999988776654
No 74
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=57.81 E-value=60 Score=29.61 Aligned_cols=40 Identities=10% Similarity=0.158 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 296 TSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 296 ~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
.++|+..-..+.+=..+++...-|..+..+..+...+.+.
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~ 153 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLT 153 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHH
Confidence 3788888888888899999999999999998887777654
No 75
>PRK13607 proline dipeptidase; Provisional
Probab=37.69 E-value=1.6e+02 Score=30.97 Aligned_cols=35 Identities=3% Similarity=0.053 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 011203 193 QFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHT 227 (491)
Q Consensus 193 r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~ 227 (491)
++..+++.++.+++++.++||++-.||..+..+.+
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 36678888899999999999999999987765544
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=31.54 E-value=1.6e+02 Score=32.09 Aligned_cols=70 Identities=13% Similarity=0.014 Sum_probs=45.3
Q ss_pred HHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-CCCcceEEeeCC-----CCcccccCCCCCCCCCccCCCCeEEEEe
Q 011203 201 EAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-HCSYTCICATGE-----NSAVLHYGHAAAPNDRTFEDGDMALLDM 274 (491)
Q Consensus 201 ~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-~~~~~~iv~sG~-----~~~~~h~~~~~~p~~~~l~~Gd~v~~D~ 274 (491)
.+-+.++..+|||.+-.+|...+...+... |-+ .+.|.-.++++. .+..+.... ++|+||.|+++.+.+
T Consensus 309 ~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~-~pel~pnF~~nvG~~igiefR~s~~~~nvk----n~r~lq~g~~fnis~ 383 (1001)
T COG5406 309 MLQKYILGLVRPGTDSGIIYSEAEKYISSN-GPELGPNFIYNVGLMIGIEFRSSQKPFNVK----NGRVLQAGCIFNISL 383 (1001)
T ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHhc-CCccCchHhhhhhhhccccccccccceecc----CCceeccccEEEEee
Confidence 344566778999999999998888887764 432 333432333322 112222222 679999999999999
Q ss_pred c
Q 011203 275 G 275 (491)
Q Consensus 275 g 275 (491)
|
T Consensus 384 g 384 (1001)
T COG5406 384 G 384 (1001)
T ss_pred c
Confidence 7
No 77
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=30.22 E-value=2.5e+02 Score=31.43 Aligned_cols=100 Identities=21% Similarity=0.162 Sum_probs=66.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-CCcceEEe------eCCCCcccccCC
Q 011203 183 FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-CSYTCICA------TGENSAVLHYGH 255 (491)
Q Consensus 183 vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-~~~~~iv~------sG~~~~~~h~~~ 255 (491)
|-...| |.+|...--.+.+++++.++||..-.+|..+....+.++ +-+. ..|.--++ +-+++....
T Consensus 253 idpsse---mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~-~Pel~~~~~k~lG~~iGlEFREssl~in--- 325 (960)
T KOG1189|consen 253 IDPSSE---MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN-KPELVPNFTKNLGFGIGLEFRESSLVIN--- 325 (960)
T ss_pred ecchHH---HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc-Ccchhhhhhhhcccccceeeeccccccc---
Confidence 544444 567777777888899999999999999998888877654 3211 11111111 112222222
Q ss_pred CCCCCCCccCCCCeEEEEeceE-------eCceEeeeeeEEee
Q 011203 256 AAAPNDRTFEDGDMALLDMGAE-------YQFYGSDITCSFPV 291 (491)
Q Consensus 256 ~~~p~~~~l~~Gd~v~~D~g~~-------~~gY~sd~tRt~~v 291 (491)
.-++++|++|.++.+.+|.. -+.|.--++-|+.|
T Consensus 326 --aKnd~~lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv 366 (960)
T KOG1189|consen 326 --AKNDRVLKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLV 366 (960)
T ss_pred --ccchhhhccCcEEEEeeccccccCcccccchhhhccceeee
Confidence 12678999999999999943 24577778889988
No 78
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=28.23 E-value=64 Score=34.77 Aligned_cols=62 Identities=10% Similarity=0.120 Sum_probs=39.7
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCC--ceeecCCCCCCEEEEEEeCCCeeEEeecCC
Q 011203 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESY--FAYLFGVREPGFYGAIDIATGKSILFAPRL 97 (491)
Q Consensus 20 R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~--~~YLtG~~~~~~~lvi~~~~g~~~l~~~~~ 97 (491)
+..|+++.|+. .++ +..|+.+..+|+.. +....+ ..|++||.++.++++|+ +.++.|+++..
T Consensus 11 ~~~~~~~~~~~----~~i---~aYi~Ps~DaH~sE-------y~~~~D~R~~flsGFsGsag~Avit--~~~a~lwtD~R 74 (606)
T KOG2413|consen 11 ELMRLRELMKS----PPI---DAYILPSTDAHQSE-------YIADRDERRAFLSGFSGSAGTAVIT--EEEAALWTDGR 74 (606)
T ss_pred HHHHHHHHhcC----CCc---eEEEccCCchhhhh-------hhcchhhhhhhhcccCCCcceEEEe--cCcceEEEccH
Confidence 34556666655 466 45566666666543 112222 35999999988888884 47888988754
No 79
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=24.53 E-value=60 Score=20.22 Aligned_cols=15 Identities=20% Similarity=0.461 Sum_probs=13.0
Q ss_pred CCCHHHHHHHHHHHH
Q 011203 11 KVPKELYFINREKVL 25 (491)
Q Consensus 11 ~~~~~~~~~R~~rl~ 25 (491)
.++.++|.+++++|.
T Consensus 16 ~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 16 EISEEEYEQKKARLL 30 (31)
T ss_pred CCCHHHHHHHHHHHh
Confidence 589999999999875
No 80
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=21.91 E-value=2e+02 Score=18.33 Aligned_cols=33 Identities=15% Similarity=0.082 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 011203 195 ANDISSEAHVEVMKKTRVGMKEYQMESMFLHHT 227 (491)
Q Consensus 195 A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~ 227 (491)
.+.+...++..+.+.++...|+.+|...+...+
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C 35 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKAC 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 356777888888889999999999998887654
Done!