Query 011203
Match_columns 491
No_of_seqs 211 out of 2298
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:17:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011203.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011203hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iw2_A XAA-Pro dipeptidase; me 100.0 1.1E-86 3.8E-91 701.9 44.1 477 4-487 11-491 (494)
2 3ig4_A XAA-Pro aminopeptidase; 100.0 5.9E-76 2E-80 606.9 40.0 402 13-478 2-414 (427)
3 3rva_A Organophosphorus acid a 100.0 3E-73 1E-77 590.1 30.4 428 15-469 6-444 (451)
4 2v3z_A XAA-Pro aminopeptidase; 100.0 1.5E-71 5.3E-76 579.5 41.8 421 11-478 2-436 (440)
5 3l24_A XAA-Pro dipeptidase; PI 100.0 6E-73 2.1E-77 592.5 30.8 445 15-485 6-471 (517)
6 4fkc_A XAA-Pro aminopeptidase; 100.0 2.8E-65 9.5E-70 523.5 23.7 362 8-470 6-375 (377)
7 4ege_A Dipeptidase PEPE; struc 100.0 3.4E-63 1.2E-67 506.6 28.0 361 8-471 6-375 (378)
8 3q6d_A Proline dipeptidase; st 100.0 4.9E-63 1.7E-67 503.0 21.8 347 15-470 1-354 (356)
9 2zsg_A Aminopeptidase P, putat 100.0 3E-60 1E-64 483.2 31.2 343 19-470 2-357 (359)
10 1wn1_A Dipeptidase; prolidase, 100.0 5.4E-61 1.8E-65 487.2 24.3 347 19-470 1-354 (356)
11 3cb6_A FACT complex subunit SP 100.0 4.9E-61 1.7E-65 502.4 22.2 402 10-478 6-443 (444)
12 1wy2_A XAA-Pro dipeptidase; st 100.0 4.3E-59 1.5E-63 472.3 28.7 339 18-469 5-350 (351)
13 3biq_A FACT complex subunit SP 100.0 1.7E-58 5.7E-63 486.1 23.6 399 10-486 6-459 (467)
14 1kp0_A Creatine amidinohydrola 100.0 1.3E-56 4.6E-61 463.1 28.7 368 6-471 12-397 (402)
15 1chm_A Creatine amidinohydrola 100.0 4.3E-56 1.5E-60 458.6 30.5 368 9-471 15-397 (401)
16 4b28_A Metallopeptidase, famil 100.0 7.1E-57 2.4E-61 469.6 22.9 372 9-472 71-467 (470)
17 3tb5_A Methionine aminopeptida 100.0 3.5E-53 1.2E-57 412.8 24.1 253 180-475 1-258 (264)
18 3ctz_A XAA-Pro aminopeptidase 100.0 1.4E-52 4.7E-57 452.6 18.3 373 11-477 172-577 (623)
19 3tav_A Methionine aminopeptida 100.0 1.9E-51 6.5E-56 404.4 22.6 257 171-466 20-286 (286)
20 4fuk_A Methionine aminopeptida 100.0 3.2E-51 1.1E-55 411.4 24.1 261 179-482 59-328 (337)
21 3mx6_A Methionine aminopeptida 100.0 1.4E-50 4.8E-55 393.7 23.9 249 179-470 4-258 (262)
22 3s6b_A Methionine aminopeptida 100.0 4.1E-50 1.4E-54 402.8 23.3 251 179-472 99-358 (368)
23 3pka_A Methionine aminopeptida 100.0 8.5E-50 2.9E-54 392.3 25.0 243 179-464 37-284 (285)
24 2gg2_A Methionine aminopeptida 100.0 2.1E-49 7.1E-54 385.9 23.1 248 180-470 1-255 (263)
25 1o0x_A Methionine aminopeptida 100.0 5E-49 1.7E-53 382.6 24.3 244 178-464 11-260 (262)
26 2b3h_A Methionine aminopeptida 100.0 6.1E-49 2.1E-53 391.8 24.5 248 179-469 71-325 (329)
27 1qxy_A Methionyl aminopeptidas 100.0 2.4E-48 8.3E-53 376.1 23.0 242 183-468 3-251 (252)
28 2q8k_A Proliferation-associate 100.0 4.7E-42 1.6E-46 351.0 24.8 276 177-481 13-370 (401)
29 1xgs_A Methionine aminopeptida 100.0 5.2E-40 1.8E-44 323.5 23.6 192 187-415 1-193 (295)
30 1b6a_A Methionine aminopeptida 100.0 3.1E-38 1.1E-42 325.6 23.0 208 178-415 153-370 (478)
31 2nw5_A Methionine aminopeptida 100.0 2.2E-36 7.5E-41 303.7 18.2 200 184-413 42-249 (360)
32 3fm3_A Methionine aminopeptida 100.0 9.8E-35 3.4E-39 292.8 23.5 212 178-415 34-249 (358)
33 4b6a_t Probable metalloproteas 99.5 4.6E-13 1.6E-17 139.2 19.9 173 180-375 37-274 (614)
34 3il0_A Aminopeptidase P; XAA-P 98.7 2.8E-09 9.6E-14 91.3 2.1 122 17-184 4-131 (131)
35 3pn9_A Proline dipeptidase; st 98.6 1.4E-08 4.7E-13 87.7 3.4 127 17-184 3-138 (138)
36 3i7m_A XAA-Pro dipeptidase; st 98.5 2.6E-08 8.9E-13 86.3 1.2 124 20-182 5-139 (140)
37 3qoc_A Putative metallopeptida 98.4 2E-08 6.9E-13 86.5 -0.5 66 9-99 2-67 (135)
38 3o5v_A X-Pro dipeptidase; crea 98.4 7.2E-08 2.4E-12 82.6 2.9 122 19-181 3-132 (132)
39 3ooo_A Proline dipeptidase; st 98.4 2.8E-08 9.6E-13 85.1 -0.4 122 19-181 3-132 (132)
40 3ovk_A Aminopeptidase P, XAA-P 98.3 1E-07 3.5E-12 81.6 -0.2 60 15-100 6-65 (132)
41 3ctz_A XAA-Pro aminopeptidase 97.8 3.4E-07 1.2E-11 98.6 -7.9 175 18-221 7-196 (623)
42 3fm3_A Methionine aminopeptida 95.3 0.065 2.2E-06 53.3 10.0 39 298-336 47-85 (358)
43 4fuk_A Methionine aminopeptida 93.0 0.45 1.5E-05 46.8 10.3 88 297-414 70-158 (337)
44 4b6a_t Probable metalloproteas 91.9 0.48 1.6E-05 49.7 9.0 120 297-457 47-184 (614)
45 1xgs_A Methionine aminopeptida 90.3 1.1 3.9E-05 42.9 9.5 40 297-336 4-43 (295)
46 2nw5_A Methionine aminopeptida 89.6 1.1 3.8E-05 44.3 9.0 39 298-336 49-87 (360)
47 3tb5_A Methionine aminopeptida 89.3 2.9 0.0001 39.1 11.4 83 192-278 119-206 (264)
48 3s6b_A Methionine aminopeptida 88.7 1.5 5.3E-05 43.4 9.2 38 298-335 111-148 (368)
49 3mx6_A Methionine aminopeptida 88.4 4.2 0.00014 38.0 11.9 83 192-278 123-210 (262)
50 1o0x_A Methionine aminopeptida 88.2 3.7 0.00013 38.5 11.3 84 191-278 131-219 (262)
51 2gg2_A Methionine aminopeptida 87.4 4.8 0.00016 37.6 11.6 84 191-278 120-208 (263)
52 1qxy_A Methionyl aminopeptidas 86.5 3.6 0.00012 38.1 10.0 39 298-336 11-49 (252)
53 2b3h_A Methionine aminopeptida 86.4 4.3 0.00015 39.5 10.9 83 191-277 189-276 (329)
54 3pka_A Methionine aminopeptida 86.1 3.7 0.00013 39.0 10.0 96 191-291 155-274 (285)
55 3tav_A Methionine aminopeptida 85.9 3.8 0.00013 38.9 10.0 38 298-335 42-79 (286)
56 2q8k_A Proliferation-associate 85.7 1.9 6.4E-05 43.4 8.0 39 298-336 27-65 (401)
57 3q6d_A Proline dipeptidase; st 84.8 9.6 0.00033 37.2 12.7 96 191-291 239-338 (356)
58 4ege_A Dipeptidase PEPE; struc 83.4 9.5 0.00033 37.7 12.1 97 192-291 260-358 (378)
59 1b6a_A Methionine aminopeptida 83.1 2.3 7.9E-05 43.6 7.4 46 298-343 168-213 (478)
60 2zsg_A Aminopeptidase P, putat 82.0 12 0.0004 36.5 12.0 95 192-291 243-341 (359)
61 1wy2_A XAA-Pro dipeptidase; st 80.5 17 0.00057 35.5 12.5 95 192-291 237-335 (351)
62 3cb6_A FACT complex subunit SP 80.0 18 0.00063 36.3 13.0 99 191-291 307-419 (444)
63 1wn1_A Dipeptidase; prolidase, 79.6 15 0.0005 35.9 11.7 96 191-291 239-338 (356)
64 4fkc_A XAA-Pro aminopeptidase; 78.7 19 0.00066 35.3 12.4 95 192-291 261-359 (377)
65 3biq_A FACT complex subunit SP 76.8 14 0.00049 37.4 11.1 99 191-291 314-424 (467)
66 2v3z_A XAA-Pro aminopeptidase; 76.5 17 0.00059 36.7 11.5 99 192-291 286-411 (440)
67 1kp0_A Creatine amidinohydrola 74.1 26 0.00089 34.6 12.0 87 191-279 272-363 (402)
68 3ig4_A XAA-Pro aminopeptidase; 71.9 19 0.00066 36.2 10.4 97 192-291 282-389 (427)
69 1chm_A Creatine amidinohydrola 71.6 25 0.00085 34.9 11.1 85 191-279 272-363 (401)
70 2iw2_A XAA-Pro dipeptidase; me 62.3 25 0.00084 36.1 9.1 37 298-334 195-231 (494)
71 4b28_A Metallopeptidase, famil 54.4 18 0.00062 36.9 6.3 99 191-291 345-449 (470)
72 3rva_A Organophosphorus acid a 53.2 42 0.0014 33.9 8.8 35 193-227 272-306 (451)
73 3l24_A XAA-Pro dipeptidase; PI 44.4 43 0.0015 34.5 7.3 36 192-227 268-303 (517)
74 2y0o_A Probable D-lyxose ketol 21.3 68 0.0023 27.9 3.4 18 397-414 120-137 (175)
75 3s93_A Tudor domain-containing 20.2 2.4E+02 0.0083 21.9 6.2 36 298-333 4-39 (102)
No 1
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=1.1e-86 Score=701.92 Aligned_cols=477 Identities=56% Similarity=0.956 Sum_probs=420.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEE
Q 011203 4 SSSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI 83 (491)
Q Consensus 4 ~~~~~~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi 83 (491)
++++.++.|+.++|++||+||+++|++...+. .++++|+.|+....++++|..|+|+|++||+|||||+.|++++++
T Consensus 11 ~~g~~~~~i~~~e~~~Rr~~l~~~~~~~~~~~---~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi 87 (494)
T 2iw2_A 11 WLGNETLKVPLALFALNRQRLCERLRKNPAVQ---AGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVI 87 (494)
T ss_dssp CCSTTCCCEETHHHHHHHHHHHHHHHHCTTCC---TTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhhhccc---CceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCCeEEEE
Confidence 57888899999999999999999998752211 136889999998888889999999999999999999999988888
Q ss_pred EeCCCeeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccc
Q 011203 84 DIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQ 163 (491)
Q Consensus 84 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 163 (491)
.+.+++++||+++++...+.|.+.+.+++.+.+.++++.+.+.+++.+.|.++ +.+++++..+.+.+.+.+.....
T Consensus 88 ~~~~~~~~L~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~i~~~~g~~~~~~~~~~~~~ 163 (494)
T 2iw2_A 88 DVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQ----KPSVLLTLRGVNTDSGSVCREAS 163 (494)
T ss_dssp ETTTCCEEEEECCCCGGGTTTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHT----CCSCEECCCCBCTTTCCBCCCCC
T ss_pred EccCCeEEEEECCCCHHHhhhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhc----CCCeEEEecCccccccccccHhh
Confidence 77779999999998888889999999999998888888888899999999876 45677766666655433322222
Q ss_pred cc----ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcc
Q 011203 164 FE----FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYT 239 (491)
Q Consensus 164 ~~----~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~ 239 (491)
+. +..+..++.+++..+|+|||++||++||+|++++.+++.++++.++||+||.||++.+...+.+++|+...+|+
T Consensus 164 ~~~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~G~~~~~~~ 243 (494)
T 2iw2_A 164 FDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYT 243 (494)
T ss_dssp CTTGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCEESSC
T ss_pred hhhhhhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 21 22456789999999999999999999999999999999999999999999999999998888766577778999
Q ss_pred eEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCC
Q 011203 240 CICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKP 319 (491)
Q Consensus 240 ~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp 319 (491)
+||+||.|++++||.+++.|++++|++||+|++|+|+.|+||++|+||||+|+|+++++|+++|++++++++++++++||
T Consensus 244 ~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kp 323 (494)
T 2iw2_A 244 CICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKP 323 (494)
T ss_dssp CEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999875578899999999999999999999999999999998899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCc
Q 011203 320 GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRE 399 (491)
Q Consensus 320 G~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~ 399 (491)
|++++||+.++++++.+.|.+.|+.++.++++++.++...||+|++||+||+++||.+.|+.|.++|..|.+.+.+++.+
T Consensus 324 G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~~~~~~~~~~~~p~~~~~~~~~~ 403 (494)
T 2iw2_A 324 GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARH 403 (494)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSCTTCCCCCSTTGGGCSCCCB
T ss_pred CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCCcccccCCCcccccccccccccccCCCCCE
Confidence 99999999999999999999999999999999999998889999999999999999988887666666666666677899
Q ss_pred cCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHHHHHHHhCC
Q 011203 400 LQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGA 479 (491)
Q Consensus 400 L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~ie~~~~~~ 479 (491)
|+||||||||||+|+.+.+++.|..|++...++||++++.|+|.|||||||+|+||++|+|+||.+|+++.+||++|++.
T Consensus 404 L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRiED~vlVte~G~e~LT~~p~~~~~ie~~m~~~ 483 (494)
T 2iw2_A 404 LQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAGC 483 (494)
T ss_dssp CCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSSSEEECCCCCCSHHHHHHHHTTC
T ss_pred eCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEeeeEEEEcCCcCeECCCCCCcHHHHHHHHccC
Confidence 99999999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 011203 480 PWPSNKTA 487 (491)
Q Consensus 480 ~~~~~~~~ 487 (491)
+||-+|-+
T Consensus 484 ~~~~~~~~ 491 (494)
T 2iw2_A 484 DKAFTPFS 491 (494)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 99966544
No 2
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=5.9e-76 Score=606.95 Aligned_cols=402 Identities=31% Similarity=0.522 Sum_probs=349.2
Q ss_pred CHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeC--CCee
Q 011203 13 PKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIA--TGKS 90 (491)
Q Consensus 13 ~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~--~g~~ 90 (491)
++++|++||+||.++|++ ++++|+.+++..+++ .|..|+|+|++||+||||+.+|++++++.+. +++.
T Consensus 2 ~~~~~~~RR~~l~~~l~~---------~~~~i~~~~~~~~~~-~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~ 71 (427)
T 3ig4_A 2 KSKFFAQNRERLVNTLPD---------ESITILFAGQAPHMS-ADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEE 71 (427)
T ss_dssp CHHHHHHHHHHHHTTSCS---------SEEEEEECCCCCEEE-TTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEE
T ss_pred CHHHHHHHHHHHHHhCcC---------CCEEEEECCCccccC-CCCCCcccCCCCeEEeeCCCCCCEEEEEEccCCCceE
Confidence 678999999999999976 478899999888775 8999999999999999999999998888663 3589
Q ss_pred EEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCC----Cccccc-
Q 011203 91 ILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFS----KPAQFE- 165 (491)
Q Consensus 91 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~----~~~~~~- 165 (491)
+||+++++...+.|.|.+.+.+...+.++++.+.+.+++.+.|.+++.+.+.++|++..+......... ....+.
T Consensus 72 ~lfv~~~~~~~~~w~g~r~~~~~a~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 151 (427)
T 3ig4_A 72 TLFIEKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVRE 151 (427)
T ss_dssp EEEECCCCTTGGGTTCCCCCHHHHHHHHCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHH
T ss_pred EEEecCCCccceEEeCCCCcHHHHHhcCCCCEEEEhhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHh
Confidence 999999999999999999999999999999999999999888888765434678876432211100000 111111
Q ss_pred --ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 011203 166 --FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA 243 (491)
Q Consensus 166 --~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~ 243 (491)
...+++++++++.++|+|||++||+.||+|+++++++++.+++.++||+||.||++.+...+.++ |+...+|++||+
T Consensus 152 ~~~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~-G~~~~~f~~iva 230 (427)
T 3ig4_A 152 QYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSS-GIKHHAFNTILA 230 (427)
T ss_dssp HCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHT-TCCEESSCCEEE
T ss_pred hCCCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCCCCCCCEEE
Confidence 24667899999999999999999999999999999999999999999999999999999988876 777789999999
Q ss_pred eCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCH
Q 011203 244 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCW 323 (491)
Q Consensus 244 sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~ 323 (491)
||.|++.+||.+ ++++|++||+|++|+|+.|+||++|+||||+|+|+++++|+++|++++++++++++++|||+++
T Consensus 231 sG~n~~~~H~~~----~~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~~s~~~~~~y~~vl~a~~~~i~~~kpG~~~ 306 (427)
T 3ig4_A 231 SGKNATVLHYED----NDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKF 306 (427)
T ss_dssp EGGGGGSTTCCC----CCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBT
T ss_pred ECccccccccCc----ccccCCCCCEEEEEeeeEECcEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcH
Confidence 999999999764 8999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCC
Q 011203 324 VDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQER 403 (491)
Q Consensus 324 ~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~G 403 (491)
+||+.++++++.+.+.+.|+.++.. ++ ..+|+|++||+||+++||.|. ..+.+|+||
T Consensus 307 ~di~~~a~~~i~~~~~~~G~~~~~~------~~-~~~~~Hg~GH~iGl~vhe~~~----------------~~~~~L~~G 363 (427)
T 3ig4_A 307 AALNEHAKKVLAEGCKAVGLIQEDE------EL-SKYYYHGVSHFLGLDTHDVGT----------------YKDRVLEEG 363 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCSSGG------GG-GGTCCSCSCCBCSSSSSCCCC----------------CTTCBCCTT
T ss_pred HHHHHHHHHHHHHhHhhcCCccCcc------hh-hccCCCCCCCcCCcCCCcCCC----------------CCCCEeCCC
Confidence 9999999999999888899865321 22 368999999999999999542 236789999
Q ss_pred CEEEECCccccccccccccccccccccccccchhcccCCcc-eeEEceEEEEeCCCeeeCC-CCCCCHHHHHHHHhC
Q 011203 404 MVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFG-GVRIESDVLVTANGSKNMT-SVPREISDIEAIMAG 478 (491)
Q Consensus 404 mv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-gvried~v~Vte~G~e~LT-~~p~~~~~ie~~~~~ 478 (491)
||||||||+|+. +.| ||||||+|+||++|+|+|| .+|+++.+||++|+.
T Consensus 364 MV~tiEPgiy~~--------------------------~~g~GvriEd~vlVt~~G~e~LT~~~pk~~~~IE~~m~~ 414 (427)
T 3ig4_A 364 MVITIEPGLYIE--------------------------EESIGIRIEDDILVTKDGHENLSKDIIREVEEIEEFMRE 414 (427)
T ss_dssp CEEEECCEEEEG--------------------------GGTEEEECBEEEEECSSSEEETTTTSCCSHHHHHHHHHH
T ss_pred CEEEECCEEEEC--------------------------CCceEEEEeeEEEEeCCcCeECCCCCCCCHHHHHHHHcc
Confidence 999999999973 333 9999999999999999999 589999999999974
No 3
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=3e-73 Score=590.11 Aligned_cols=428 Identities=26% Similarity=0.428 Sum_probs=345.1
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCC-CCEEEEEEeCCCeeEEe
Q 011203 15 ELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVRE-PGFYGAIDIATGKSILF 93 (491)
Q Consensus 15 ~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~-~~~~lvi~~~~g~~~l~ 93 (491)
..|.+++++++++.++.+.+.+. ++++|+. +....++++|..|||+|+++|+||||+.. |++++++.+ +++++||
T Consensus 6 ~l~~~~~~~~~~r~~~~l~~~~~--~~~~i~~-~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~-~~~~~l~ 81 (451)
T 3rva_A 6 ATYQQHIEELQARTREALQREGL--DGLVIHS-GQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNG-VDKPTLI 81 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC--SEEEEEC-CCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECS-SSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CEEEEEC-CCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEec-CCCeEEE
Confidence 45666666655555555444455 5666664 44555667999999999999999999987 999888844 5688888
Q ss_pred ecCCCCccccccccCCChhH-HHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCcccccccccccc
Q 011203 94 APRLPPDYAVWLGKIKPLSY-FQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEFETELNT 172 (491)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 172 (491)
+++. .+ .|.+.....+. |.+.++++.+.+.+++.+.|.+. . .++..+ |.+.+. .....+ ...++++
T Consensus 82 ~~~~-~d--~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~-~~~~~~-g~~~~~---~~~~~~-~~~~~~~ 148 (451)
T 3rva_A 82 FYRP-ED--FWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYD----K-SRFAYV-GEYIEV---AKALGF-DNVNPDR 148 (451)
T ss_dssp EECC-CC--TTSCCCCSCCSTTGGGSEEEEESSGGGGGGGSCSC----G-GGEEEE-SSCHHH---HHHHTC-SCBSCHH
T ss_pred eecc-HH--hhhccccCcchhHHhccCeEEEecHHHHHHHHhhc----c-CceEEE-ccCcCH---HHhhhh-cccCchH
Confidence 8874 22 68776444443 46677888888888887766543 1 223322 332211 000011 1246678
Q ss_pred hHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccc
Q 011203 173 LHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLH 252 (491)
Q Consensus 173 ~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h 252 (491)
+.++|.++|+|||++||++||+|+++++++++.+++.++||+||.||++++...+ . .|+...+|++||++|.|++++|
T Consensus 149 ~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~-~-~g~~~~~f~~IVasG~naa~~H 226 (451)
T 3rva_A 149 VLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAAS-R-QGDNDVPYTSIVALNEHASILH 226 (451)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-T-CCTTTSSSCCEEEEGGGGGCTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH-H-cCCCcCCcCcEEEECCcccccC
Confidence 9999999999999999999999999999999999999999999999998876653 3 4667789999999999999999
Q ss_pred cCCCCCCCCCc-cCCCCeEEEEeceEeCceEeeeeeEEeeCCCC--CHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Q 011203 253 YGHAAAPNDRT-FEDGDMALLDMGAEYQFYGSDITCSFPVNGKF--TSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKL 329 (491)
Q Consensus 253 ~~~~~~p~~~~-l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~--~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~ 329 (491)
|.+ ++++ +++||+|++|+|+.|+||++|+||||++ |++ +++++++|++++++++++++++|||++++||+++
T Consensus 227 ~~~----~~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~v-G~~~~~~~~~~ly~~vl~aq~aai~~ikPG~~~~di~~a 301 (451)
T 3rva_A 227 YMQ----CDTVAPKESRSFLIDAGANYHGYAADITRTYAQ-EGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLL 301 (451)
T ss_dssp CCC----CCSSCCSSCCEEEEEEEEEETTEEEEEEEEEEC-TTSTTHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHH
T ss_pred CCC----CCCcccCCCCEEEEEeeEEECCEEEEeEEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 765 6665 6899999999999999999999999999 776 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCC---C--CCCCCCCCcCcCCCCccCCCC
Q 011203 330 AEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKG---T--ERSKEPGLKSLRTVRELQERM 404 (491)
Q Consensus 330 ~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~---~--~~~~~~~~~~~~~~~~L~~Gm 404 (491)
+++++.+.|.+.|+.++.++++++.|+...||+|++||+|||++||.|.+..+ . .+|. ...+.+++++|+|||
T Consensus 302 a~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiGldvHe~p~~~~~~~g~~~~~~~--~~~~l~~~~~L~~GM 379 (451)
T 3rva_A 302 AHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPD--DHPFLRCTRMVEARQ 379 (451)
T ss_dssp HHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCTTTTBSSTTCCBCCCCT--TCTTCCCCCBCCTTC
T ss_pred HHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCcccccCCcccCcccccccccccccccc--ccccCCCCCCcCCCC
Confidence 99999999999999999999999999877899999999999999999877532 1 1111 122335678999999
Q ss_pred EEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCH
Q 011203 405 VITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREI 469 (491)
Q Consensus 405 v~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~ 469 (491)
|||||||+|+.+.+++.|. +++...++||++++.++|+|||||||+|+||++|+|+|| ..|+.+
T Consensus 380 V~TIEPGiY~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~G~e~LT~~~~~~~ 444 (451)
T 3rva_A 380 VFTIEPGLYFIDSLLRDLK-ATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNL 444 (451)
T ss_dssp EEEECCEEECCHHHHHHHH-TSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCEEEHHHHTTCCS
T ss_pred EEEECCEEeEchhhhhhhc-ccccccccccchhhhcCCCCEEEcccEEEECCCcceECCCCCCccc
Confidence 9999999999888887776 456788999999999999999999999999999999999 455554
No 4
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=1.5e-71 Score=579.54 Aligned_cols=421 Identities=32% Similarity=0.517 Sum_probs=353.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeC---C
Q 011203 11 KVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIA---T 87 (491)
Q Consensus 11 ~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~---~ 87 (491)
+++.++|++||++|++.|++. +.+++.++.+..++ .|..|+|+|++||+|||||..+++++++.+. +
T Consensus 2 ~~~~~e~~~R~~~l~~~m~~~---------~~~ll~~~~~~~r~-~D~~y~frq~~n~~YltG~~~~~~~lvi~~~~~~~ 71 (440)
T 2v3z_A 2 EISRQEFQRRRQALVEQMQPG---------SAALIFAAPEVTRS-ADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTH 71 (440)
T ss_dssp CCCHHHHHHHHHHHHHHSCSS---------EEEEEECCCCCEEE-TTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSC
T ss_pred CCCHHHHHHHHHHHHHhcccC---------CEEEEECCCccccC-CCCCCcccCCCCEEEecCCCCCCEEEEEEecCCCC
Confidence 468999999999999999863 34667677777775 8999999999999999999999888777653 3
Q ss_pred CeeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCC--CCCCCccccc
Q 011203 88 GKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDS--NNFSKPAQFE 165 (491)
Q Consensus 88 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~--~~~~~~~~~~ 165 (491)
++++||+++.+...+.|.+.+..++.+.+.++++.+.+.+++.+.|.+++. +.+++++..+..... ....+...+.
T Consensus 72 ~~~~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~l~ 149 (440)
T 2v3z_A 72 NHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN--GLDVVYHAQGEYAYADVIVNSALEKLR 149 (440)
T ss_dssp EEEEEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHT--TCSEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHc--CCCEEEEeCCcccchhHHHHHHHHHHh
Confidence 789999999887788899988888887877788877788888888877653 345676432211000 0000100000
Q ss_pred --------ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 011203 166 --------FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCS 237 (491)
Q Consensus 166 --------~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~ 237 (491)
...+++++.+++..+|+|||++||+.||+|+++++.++..+++.++||+||.||++.+...++++ |+...+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~ 228 (440)
T 2v3z_A 150 KGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRH-GARYPS 228 (440)
T ss_dssp TCGGGTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCCEES
T ss_pred hhcccccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCCcCC
Confidence 12457789999999999999999999999999999999999999999999999999999888876 777789
Q ss_pred cceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 011203 238 YTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM 317 (491)
Q Consensus 238 ~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~l 317 (491)
|++|+++|.|++.+||.+ ++++|++||+|++|+|+.|+|||+|+||||+++|+++++|+++|++++++++++++++
T Consensus 229 f~~iv~~G~n~~~~H~~~----~~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~ 304 (440)
T 2v3z_A 229 YNTIVGSGENGCILHYTE----NECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLY 304 (440)
T ss_dssp SCCEEEEGGGGGSTTCCC----CCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEcCccccccCCC----CCccccCCCEEEEEeeEEECCEEEeeEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999764 8999999999999999999999999999999988999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCC
Q 011203 318 KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTV 397 (491)
Q Consensus 318 kpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~ 397 (491)
|||++++||+.++++++.+.|++.|+.++.++++++......+|+|++||+||+++||.|.+.+ .++
T Consensus 305 ~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~~-------------~~~ 371 (440)
T 2v3z_A 305 RPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQ-------------DRS 371 (440)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCCG-------------GGC
T ss_pred cCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcCC-------------CCC
Confidence 9999999999999999999999999988888777665555578999999999999999775431 245
Q ss_pred CccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCHHHHHHHH
Q 011203 398 RELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIM 476 (491)
Q Consensus 398 ~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~~~ie~~~ 476 (491)
.+|+||||||||||+|+... .+.++.|.+. |+||||+|+||++|+|+|| .+|+++.+||++|
T Consensus 372 ~~L~~Gmv~tiEPgiy~~~~----------------~~~~~~~~~~-GvriEd~vlVt~~G~e~LT~~~p~~~~~Ie~~~ 434 (440)
T 2v3z_A 372 RILEPGMVLTVAPGLYIAPD----------------AEVPEQYRGI-GIRIEDDIVITETGNENLTASVVKKPEEIEALM 434 (440)
T ss_dssp CCCCTTCEEEECCEEEECTT----------------CSSCGGGTTE-EEECBEEEEEETTEEEESSTTSCCSHHHHHHHH
T ss_pred CccCCCCEEEECCEEEeCCc----------------ccccccccee-EEEEeeEEEECCCcCeECCcccCCCHHHHHHHH
Confidence 79999999999999998541 1123334454 8999999999999999999 6999999999999
Q ss_pred hC
Q 011203 477 AG 478 (491)
Q Consensus 477 ~~ 478 (491)
++
T Consensus 435 ~~ 436 (440)
T 2v3z_A 435 VA 436 (440)
T ss_dssp HH
T ss_pred hc
Confidence 76
No 5
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=6e-73 Score=592.51 Aligned_cols=445 Identities=24% Similarity=0.394 Sum_probs=343.9
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCC-CCEEEEEEeCCCeeEEe
Q 011203 15 ELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVRE-PGFYGAIDIATGKSILF 93 (491)
Q Consensus 15 ~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~-~~~~lvi~~~~g~~~l~ 93 (491)
..|.+++++++++.++.+...+. ++++|+. +....++++|..|||+|+++|+||||+.. |++++++.+ +++++||
T Consensus 6 ~l~~~h~~~~~~r~~~~l~~~~~--~~~~i~~-~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~-~~~~~l~ 81 (517)
T 3l24_A 6 VLYAEHIATLQKRTREIIERENL--DGVVFHS-GQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANG-TDKPKLI 81 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC--SEEEEEC-CCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECS-SSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CEEEEEC-CCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEec-CCCeEEE
Confidence 45666666666666655544455 5666554 45555667999999999999999999987 999888844 5678888
Q ss_pred ecCCCCccccccccCCChhH-HHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCcccccccccccc
Q 011203 94 APRLPPDYAVWLGKIKPLSY-FQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEFETELNT 172 (491)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 172 (491)
+++. .+ .|.+.....+. |.+.++++.+.+.+++.+.|.+. .. +++.. |.+.+. .....+ ...++++
T Consensus 82 ~~~~-~d--~w~g~~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~----~~-~~~~~-g~~~~~---~~~~~~-~~~~~~~ 148 (517)
T 3l24_A 82 FYRP-VD--FWHKVPDEPNEYWADYFDIELLVKPDQVEKLLPYD----KA-RFAYI-GEYLEV---AQALGF-ELMNPEP 148 (517)
T ss_dssp EECC-CC--SSSCCCCCCCSGGGGGSEEEEESSGGGCGGGSCSC----CT-TEEEE-SSCHHH---HHHHTC-CCBSCHH
T ss_pred Eecc-hh--hhhccccCchhhhhhccCeEEEcCHHHHHHHHhhc----cC-ceEEE-cCCcCH---HHhhhh-ccCCchh
Confidence 8773 22 68776554443 56777888888888887766543 22 23322 432211 000011 1246778
Q ss_pred hHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccc
Q 011203 173 LHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLH 252 (491)
Q Consensus 173 ~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h 252 (491)
++++|.++|+|||++||++||+|+++++++++.+++.++||+||.||++++...+ . .|+...+|++||++|.|++++|
T Consensus 149 ~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~-~-~g~~~~sf~~IVasG~naa~~H 226 (517)
T 3l24_A 149 VMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLAT-Q-HSENDNPYGNIVALNENCAILH 226 (517)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-T-CCGGGSSSCCEEEEGGGGGCTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-H-cCCCcCCcCCEEEEcccccccc
Confidence 9999999999999999999999999999999999999999999999998876653 2 3666789999999999999999
Q ss_pred cCCCCCCCCCc-cCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011203 253 YGHAAAPNDRT-FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 331 (491)
Q Consensus 253 ~~~~~~p~~~~-l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~ 331 (491)
|.+ ++++ +++||+|++|+|+.|+||++|+||||++ |+ +++++++|++++++|+++++++|||++++||+++++
T Consensus 227 ~~p----~~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~v-G~-~~e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~ 300 (517)
T 3l24_A 227 YTH----FDRVAPATHRSFLIDAGANFNGYAADITRTYDF-TG-EGEFAELVATMKQHQIALMNQLAPGKLYGELHLDCH 300 (517)
T ss_dssp CCC----CCSSCCSSCCEEEEEEEEEETTEEEEEEEEEES-SS-CSHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHH
T ss_pred CCC----CCCccccCCCEEEEeecEEECCEEEEeEEEEEc-CC-CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 765 6765 7999999999999999999999999999 76 478999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCC---CCCCCCCCCcCcCCCCccCCCCEEEE
Q 011203 332 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKG---TERSKEPGLKSLRTVRELQERMVITV 408 (491)
Q Consensus 332 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~---~~~~~~~~~~~~~~~~~L~~Gmv~~i 408 (491)
+++.+.|.+.|+.++.++++++.|+...||+|++||+|||++||.|.+..+ ...+......+.+++++|+|||||||
T Consensus 301 ~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiGLdvHE~p~~~~~~~g~~~~~~~~~p~l~~~~~Le~GMV~TI 380 (517)
T 3l24_A 301 QRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQVFTI 380 (517)
T ss_dssp HHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCCCTTC---------------CCTTCBCCTTEEEEE
T ss_pred HHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCCcccccCccccccccccccccccccccCCCCccccCCcEEEE
Confidence 999999999999999999999999888899999999999999999877531 10000001223356789999999999
Q ss_pred CCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCH--H------------HHH
Q 011203 409 EPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREI--S------------DIE 473 (491)
Q Consensus 409 epg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~--~------------~ie 473 (491)
|||+|+.+.+++.|. +++...++||++++.|+|+|||||||+|+||++|+|+|| .+|++- . .-+
T Consensus 381 EPGiY~~~~~l~~~~-~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~G~e~LT~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (517)
T 3l24_A 381 EPGLYFIDSLLGDLA-ATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSLENMTRELRLRLTTHSLRGLSAPQFSINDP 459 (517)
T ss_dssp CCEEECCHHHHHHHH-TSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCEEEHHHHTTCC-------------------
T ss_pred CCEEeechhhhhhhc-ccccccccccchhhhcCCCCEEEEeeEEEECCCcCeeCCCccchhhccchhccccccccccCCh
Confidence 999999888888876 456778999999999999999999999999999999999 788772 1 225
Q ss_pred HHHhCCCCCCCC
Q 011203 474 AIMAGAPWPSNK 485 (491)
Q Consensus 474 ~~~~~~~~~~~~ 485 (491)
+.|.+++-|+++
T Consensus 460 ~~m~~y~~~~~~ 471 (517)
T 3l24_A 460 AVMSEYSYPSEP 471 (517)
T ss_dssp ------------
T ss_pred hhcccCcccCCC
Confidence 677777777654
No 6
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=2.8e-65 Score=523.48 Aligned_cols=362 Identities=24% Similarity=0.295 Sum_probs=293.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCE----EEEE
Q 011203 8 SPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGF----YGAI 83 (491)
Q Consensus 8 ~~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~----~lvi 83 (491)
.+.+|...||++|++||++.|++. ++ |+++|. +.+||+|||||+.+++ ++++
T Consensus 6 ~~~~~~~~Ey~~Rl~rlr~~m~~~----gl--Dalli~------------------~~~ni~YLTG~~~~~~~~~~~~lv 61 (377)
T 4fkc_A 6 HHHHHGSMDYKRRIHKFQAHFGKK----GF--EGALVA------------------PGSNFYYLTGFNPLGTLERLFVLI 61 (377)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHT----TC--CEEEEC------------------SSHHHHHHHSCCCCCCSSSCCEEE
T ss_pred cCCCcchHHHHHHHHHHHHHHHHC----CC--CEEEEC------------------CChhheeecCCCCCCCCcceEEEE
Confidence 457899999999999999999985 77 555433 4567999999986553 3455
Q ss_pred EeCCCeeEEeecCCCCc-cccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCcc
Q 011203 84 DIATGKSILFAPRLPPD-YAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPA 162 (491)
Q Consensus 84 ~~~~g~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 162 (491)
++.+|++++++++.+.. ...|.+.+..+. +...+.+.+.+.+.+... ..+++++.. ..+.....
T Consensus 62 v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~--~~~~i~~d~-----~~~~~~~~ 126 (377)
T 4fkc_A 62 LPSEGLLTAIAPRLYEKELEEFNGEVVLWS--------DSENPYKIFATKIKETFK--EGEKLLIDD-----TMPVGVFL 126 (377)
T ss_dssp EESSSCCEEEEEGGGHHHHTTCSSEEEEEC--------TTSCHHHHHHHHHHHHSC--SSCEEEECT-----TSCHHHHH
T ss_pred EcCCCcEEEEeccchHHHHHhcCCCEEEec--------cccCHHHHHHHHHHHhhh--ccceeeeec-----cccHHHHH
Confidence 58889999999876433 233433322211 112234556666766532 346776521 11111111
Q ss_pred ccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcc
Q 011203 163 QFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYT 239 (491)
Q Consensus 163 ~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~ 239 (491)
.+. ...++++++++|.++|+|||++||+.||+|++++++++..+++.++||+||.||++.+...+.+++|+...+|+
T Consensus 127 ~l~~~~~~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~g~~~~~f~ 206 (377)
T 4fkc_A 127 KAKDIFDKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEFGADDVSFE 206 (377)
T ss_dssp HTHHHHTTSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTSTTCCEESSC
T ss_pred HHHhhCCCCeEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhccCCCCcccC
Confidence 121 25677899999999999999999999999999999999999999999999999999998888776688888999
Q ss_pred eEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCC
Q 011203 240 CICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKP 319 (491)
Q Consensus 240 ~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkp 319 (491)
+|+++|+|++.+||.+ ++++|++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+.++++++++++.+||
T Consensus 207 ~iv~~G~n~~~~H~~~----~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~-G~~~~~~~~~~~~v~~a~~~~~~~~~p 281 (377)
T 4fkc_A 207 PIVASGPNGANPHHRP----SHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVV-GPPSEEVKKVYEIVKEAQETAVQKVAE 281 (377)
T ss_dssp CEEEEGGGGGCTTCCC----CSCBCCTTCEEEEEECEEETTEECCEEEEEES-SSCCTHHHHHHHHHHHHHHHHHHHCBT
T ss_pred cccccccccccccccc----ccccccccccccccccccccCcccccceeEEE-ecCCHHHHHhhhhhHHHHHHHHHhhcC
Confidence 9999999999999754 89999999999999999999999999999987 999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCc
Q 011203 320 GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRE 399 (491)
Q Consensus 320 G~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~ 399 (491)
|+++++|+.++++++. +.|+ . .+|+|++|||||+++||.|.+ ...++.+
T Consensus 282 G~~~~~i~~~~~~~~~----~~g~-------------~-~~~~h~~GHgiGl~~hE~P~i-------------~~~~~~~ 330 (377)
T 4fkc_A 282 GIPAEVVDATARGIIS----KYGY-------------G-EYFIHRTGHGLGIDVHEEPYI-------------SPGNKKI 330 (377)
T ss_dssp TCBHHHHHHHHHHHHH----HTTC-------------T-TTCCSCSEEECSSSSSEEEEE-------------CSSCCCB
T ss_pred CcchhhhHHHHHHHHH----Hhcc-------------c-ccCCCCCeEeCCCccccCCcc-------------cCCCCCE
Confidence 9999999999999874 4665 2 478999999999999996633 2345789
Q ss_pred cCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 400 LQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 400 L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
|+||||||||||+|+ +|.+|+||||+|+||++|+|+||..|++|.
T Consensus 331 L~~Gmv~tiEPgiy~--------------------------~g~~GvriEd~v~Vt~~g~e~Lt~~p~eli 375 (377)
T 4fkc_A 331 LKDGMVFTIEPGIYL--------------------------QGKFGVRIEDDVALVDKKGIRLTNADRELI 375 (377)
T ss_dssp CCTTCEEEECCEEEE--------------------------TTTEEEECBEEEEEETTEEEESCCSCCSCC
T ss_pred eCCCCEEEECCeeEE--------------------------CCccEEEEccEEEEECCCcEECCCCCCCeE
Confidence 999999999999997 677899999999999999999999999874
No 7
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=3.4e-63 Score=506.60 Aligned_cols=361 Identities=22% Similarity=0.288 Sum_probs=284.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC----EEEEE
Q 011203 8 SPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG----FYGAI 83 (491)
Q Consensus 8 ~~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~----~~lvi 83 (491)
.+..|+.++|.+|++||++.|++. ++ |+++|. +..|++|||||.... .+++|
T Consensus 6 ~~~~~~~~e~~~R~~~l~~~m~~~----g~--da~li~------------------~~~ni~YltG~~~~~~~r~~~l~v 61 (378)
T 4ege_A 6 DSGRFDTAVYARRLAAAAAATEQA----GL--AGLVIT------------------PGYDLRYLIGSRADTFERLTALVL 61 (378)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHT----TC--SEEEEC------------------SSHHHHHHHCCCCCCSSSCCEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHc----CC--CEEEEC------------------CcchhHHhhCCCCCCCcceEEEEE
Confidence 457899999999999999999985 67 555443 345799999997532 34444
Q ss_pred EeCCCeeEEeecCCCCccccccccCCChhHHHHHhcCceecch--hHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCc
Q 011203 84 DIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYT--DEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKP 161 (491)
Q Consensus 84 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 161 (491)
+.+|+++||++.++.....-.. .... ++.-..|. .+..+.+.+.++. +.++|++. +..+....
T Consensus 62 -~~~g~~~l~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~l~~~l~~-~~~~igve-----~~~~~~~~ 126 (378)
T 4ege_A 62 -PASGVPTIVLPRLELASLKESA-ASDL-------GVCVRDWVDGDDPYQLVAVALGG-APAATAVT-----DSMPALHL 126 (378)
T ss_dssp -ESSSCCEEEEEGGGGGGGGTSS-TTTT-------TCEEEEECTTSCHHHHHHHHTTS-SSCCEEEC-----TTCCHHHH
T ss_pred -EeCCcEEEEEChhhHHHHHhcc-cCCC-------CeEEEEecCCCCHHHHHHHHHhc-CCCEEEEc-----CCCcHHHH
Confidence 7789999999887654321110 0000 00101110 1122334444432 33578763 11111111
Q ss_pred cccc--ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcc
Q 011203 162 AQFE--FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYT 239 (491)
Q Consensus 162 ~~~~--~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~ 239 (491)
..+. ++.+++++++++..+|+|||++||+.||+|+++++++++.+++.++||+||.||++.+...+.++ |+...+|
T Consensus 127 ~~l~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~f- 204 (378)
T 4ege_A 127 LPLADALGVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAADIAEAIVAE-GHSAVAF- 204 (378)
T ss_dssp HHHHHHHTSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCSEEEE-
T ss_pred HHHHHHcCCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCCCCe-
Confidence 1121 24678899999999999999999999999999999999999999999999999999999988876 7776678
Q ss_pred eEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEe-CceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhC
Q 011203 240 CICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEY-QFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMK 318 (491)
Q Consensus 240 ~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~-~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lk 318 (491)
+|++||.|++.+|+. |++++|++||+|++|+|+.| +|||+|+|||+++ |+++++|+++|++++++++++++++|
T Consensus 205 ~iv~sG~n~~~~H~~----~~~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~~~~~~ 279 (378)
T 4ege_A 205 VIVGSGPHGADPHHG----YSDRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSI-GDPSPDVAQQYSALQRAQRAAVDAVR 279 (378)
T ss_dssp EEEEEGGGGGCTTCC----CCSCBCCTTCEEEEEEEEEETTTEECCEEEEEEE-SCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eEEEeeCCCCccCCC----CCCCCcCCCCEEEEEEEEEECCeEEEccEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999999965 48999999999999999999 9999999999999 99999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCC
Q 011203 319 PGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVR 398 (491)
Q Consensus 319 pG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~ 398 (491)
||++++||++++++++. +.|| . .+|+|++|||||+++||.|.+. ..++.
T Consensus 280 pG~~~~~v~~~~~~~~~----~~G~-------------~-~~~~h~~GHgiGl~~hE~P~i~-------------~~~~~ 328 (378)
T 4ege_A 280 PGVTAAQVDAAARDVLA----DAGL-------------A-EYFVHRTGHGIGLCVHEEPYIV-------------AGNEL 328 (378)
T ss_dssp TTCBHHHHHHHHHHHHH----HTTC-------------G-GGCCSCSEEECSSSSSEEEEEC-------------TTCCC
T ss_pred CCCcHHHHHHHHHHHHH----HcCC-------------C-CcCCCCCcccCCCCcCCCCccC-------------CCCCC
Confidence 99999999999999874 4665 2 4789999999999999966332 23568
Q ss_pred ccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHH
Q 011203 399 ELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISD 471 (491)
Q Consensus 399 ~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~ 471 (491)
+|+|||||+||||+|+ +|.+|+||||+|+||++|+|+||..|+++..
T Consensus 329 ~L~~Gmv~tiEPgiy~--------------------------~g~~gvriEd~v~Vt~~G~e~Lt~~p~~l~~ 375 (378)
T 4ege_A 329 PLVAGMAFSIEPGIYF--------------------------PGRWGARIEDIVVVTENGALSVNNRPHELMV 375 (378)
T ss_dssp BCCTTBEEEECCEEEE--------------------------TTTEEEECBEEEEEETTEEEESCCSCCSCEE
T ss_pred ccCCCCEEEECCEEEe--------------------------CCccEEEEeeEEEEeCCcCeECCCCCCccEE
Confidence 9999999999999997 5778999999999999999999999998754
No 8
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=4.9e-63 Score=503.04 Aligned_cols=347 Identities=26% Similarity=0.376 Sum_probs=278.8
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCCeeEEee
Q 011203 15 ELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFA 94 (491)
Q Consensus 15 ~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g~~~l~~ 94 (491)
++|.+|+++|++.|++. ++ |+++|. ...|++|||||..+++++++ +. ++++||+
T Consensus 1 ~~~~~Rl~~lr~~m~~~----gi--Da~lI~------------------~~~ni~YLtGf~g~~~~llv-t~-~~~~l~~ 54 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEA----GI--DGILLT------------------NEHSRRYMANFTGTAGVVLI-SK-KRAQFIT 54 (356)
T ss_dssp -CHHHHHHHHHTTHHHH----TC--SEEEEC------------------CHHHHHHHHCCCSSSCEEEE-ES-SCEEEEE
T ss_pred CcHHHHHHHHHHHHHHc----CC--CEEEEC------------------ChhhceEccCCCCCCeEEEE-EC-CCeEEEE
Confidence 46899999999999985 66 555443 23469999999987776666 43 4678888
Q ss_pred cCCCCccccccccCCChhHHHHHhcCcee----cchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc---cc
Q 011203 95 PRLPPDYAVWLGKIKPLSYFQEKYMVNMV----YYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE---FE 167 (491)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~---~~ 167 (491)
+......... +..+..-. .+.+.+.+.+.+. +.++|++. .+..++.....+. ..
T Consensus 55 d~r~~~~a~~-----------~~~~~~v~~~~~~~~~~l~~~l~~~----~~~~igve----~~~~~~~~~~~l~~~~~~ 115 (356)
T 3q6d_A 55 DFRYVEQASK-----------QAVGYEIVQHAGLIIDEVAKQVKEL----GIQKLGFE----QDTLTYSSYSAHKEAIDA 115 (356)
T ss_dssp CGGGHHHHHH-----------HSTTSEEEECSSCHHHHHHHHHHHH----TCSEEEEE----TTTSBHHHHHHHHHHCCS
T ss_pred ChhhHHHHHh-----------hCCCCEEEEeCCCHHHHHHHHHHhc----CCceEEEc----CccCCHHHHHHHhhhccc
Confidence 7542221100 00011111 1245566666554 55788763 2221211112222 12
Q ss_pred ccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCC
Q 011203 168 TELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGEN 247 (491)
Q Consensus 168 ~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~ 247 (491)
+++++++++..+|+|||++||+.||+|+++++.++..+++.++||+||.|+++.+...+.++ |+...+|+++++||.|
T Consensus 116 -~~~~~~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~-g~~~~~f~~iv~~g~n 193 (356)
T 3q6d_A 116 -EFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQ-GATSSSFDIIVASGLR 193 (356)
T ss_dssp -EEEEECSHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGGG
T ss_pred -ceecchhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHC-CCCcCCCCCEEEEcCc
Confidence 67788899999999999999999999999999999999999999999999999999888775 7777899999999999
Q ss_pred CcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Q 011203 248 SAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMH 327 (491)
Q Consensus 248 ~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~ 327 (491)
++.+|+. |++++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||+
T Consensus 194 ~~~~H~~----~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~-G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~ 268 (356)
T 3q6d_A 194 SALPHGV----ASEKVIETGDFVTLDFGAYYKGYCSDITRTIAV-GEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREAD 268 (356)
T ss_dssp GGCTTCB----CCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred cccCCCC----CCCcccCCCCEEEEEEeEEECCEEeeeEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 9999965 489999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEE
Q 011203 328 KLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVIT 407 (491)
Q Consensus 328 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~ 407 (491)
.++++++. +.|| . .+|+|++|||||+++||.|.+. ..++.+|+|||||+
T Consensus 269 ~~~~~~~~----~~g~-------------~-~~~~h~~GHgiGl~~he~p~i~-------------~~~~~~l~~Gmv~t 317 (356)
T 3q6d_A 269 ALTRDYIT----EKGY-------------G-EYFGHSTGHGIGLEIHEAPGLA-------------FRSDTVLEPGMAVT 317 (356)
T ss_dssp HHHHHHHH----HTTC-------------G-GGCCSCSEEECSSSSSEEEEES-------------TTCCCBCCTTCEEE
T ss_pred HHHHHHHH----HcCC-------------c-ccCCCCCcccCCCCcCcCCCCC-------------CCCCCCcCCCCEEE
Confidence 99999874 4665 2 4679999999999999965322 23578999999999
Q ss_pred ECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 408 VEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 408 iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
+|||+|+ +|++|+||||+|+||++|+|+||..|+++.
T Consensus 318 iEPgiy~--------------------------~g~~gvriEd~v~vt~~G~e~Lt~~p~~l~ 354 (356)
T 3q6d_A 318 VEPGIYI--------------------------PGIGGVRIEDDIIVTSEGNEVITKSPKELI 354 (356)
T ss_dssp ECCEEEE--------------------------TTTEEEECBEEEEECSSSEEECCCSCCSCC
T ss_pred ECCEEEE--------------------------CCCCeEEEccEEEEeCCcceeCCCCCcceE
Confidence 9999997 677899999999999999999999999874
No 9
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=3e-60 Score=483.19 Aligned_cols=343 Identities=24% Similarity=0.372 Sum_probs=274.7
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCc-----eeecCCCCCCEEEEEEeCCCeeEEe
Q 011203 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF-----AYLFGVREPGFYGAIDIATGKSILF 93 (491)
Q Consensus 19 ~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~-----~YLtG~~~~~~~lvi~~~~g~~~l~ 93 (491)
+|+++|++.|++. ++ |+++|. + ..|+ +|||||..+++++++ +. ++++||
T Consensus 2 ~Rl~~Lr~~m~~~----~l--Da~li~-~-----------------~~ni~~~~~~YLtGf~~~~~~llI-~~-~~~~L~ 55 (359)
T 2zsg_A 2 DRSERLIQLISEE----GI--DAFLIM-N-----------------IENSARASSVYFSGFTGSFSIILI-SE-NTRLLI 55 (359)
T ss_dssp CCHHHHHHHHHTT----TC--CEEEEE-E-----------------STTTTHHHHHHHHCCCSSCEEEEE-ET-TEEEEE
T ss_pred hHHHHHHHHHHHC----CC--cEEEEE-C-----------------hhHcccccCeeEeccCCCCEEEEE-EC-CCCEEE
Confidence 4899999999874 66 555444 2 2356 999999988877777 43 468899
Q ss_pred ecCCCCccccccccCCChhHHHHHhcCceec-----chhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc--c
Q 011203 94 APRLPPDYAVWLGKIKPLSYFQEKYMVNMVY-----YTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE--F 166 (491)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~ 166 (491)
++........ .+ .+++-.. +.+.+.+.|.+. +.++|++. .+..++.....+. +
T Consensus 56 ~d~r~~~~a~-----------~~-~~~~v~~~~~~~~~~~l~~~L~~~----~~~~vgvd----~~~~~~~~~~~l~~~l 115 (359)
T 2zsg_A 56 TDSRYTVQAK-----------QE-TDFEVREVKGGDFIDVLKKTVNDL----KIKTIALE----EERVSLSLFRRISSAF 115 (359)
T ss_dssp ECTTTHHHHH-----------HH-CCSEEEEC---CCHHHHHHHHHHT----TCCEEEEC----GGGSBHHHHHHHHHHT
T ss_pred ECcccHHHHH-----------hC-CCCEEEEecCcchHHHHHHHHHhc----CCCEEEEe----CCcCCHHHHHHHHhhC
Confidence 9875432111 00 1111111 234455566543 45678653 2211111111121 1
Q ss_pred -cccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeC
Q 011203 167 -ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATG 245 (491)
Q Consensus 167 -~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG 245 (491)
..+++++++++..+|+|||++||+.||+|+++++.++..+++.++||+||.|+++.+...+.++ |+...+|++++++|
T Consensus 116 ~~~~~v~~~~~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~-g~~~~~f~~iv~~g 194 (359)
T 2zsg_A 116 GDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKE-GAEGVAFDTIVASG 194 (359)
T ss_dssp TTCEEEECHHHHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHT-TCSEESSCCEEEEG
T ss_pred CCcEEEEChhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCCCCCCCEEEEc
Confidence 2467788999999999999999999999999999999999999999999999999999888775 77778999999999
Q ss_pred CCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 011203 246 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVD 325 (491)
Q Consensus 246 ~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~e 325 (491)
.|++.+|+. |++++|++||+|++|+|+.|+|||+|+||||++ |+++++|+++|++++++++++++++|||++++|
T Consensus 195 ~~~~~~h~~----~~~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~-G~~~~~~~~~~~~v~~~~~~~~~~~~pG~~~~~ 269 (359)
T 2zsg_A 195 CRSALPHGK----ASDKVVERGDVIVIDFGATYENYCADITRVVSI-GEPSDEVKEVHSIVLEAQERALKIAKAGVTGKL 269 (359)
T ss_dssp GGGGSTTCC----CCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHH
T ss_pred cccccccCC----CCCcccCCCCEEEEEEeEEECCEEEeeeEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHH
Confidence 999999965 489999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCE
Q 011203 326 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMV 405 (491)
Q Consensus 326 v~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv 405 (491)
|+.++++++. +.|+ . .+|+|++|||||+++||.|.+. .+++.+|+||||
T Consensus 270 v~~~~~~~~~----~~g~-------------~-~~~~h~~GHgiGl~~he~p~i~-------------~~~~~~l~~gmv 318 (359)
T 2zsg_A 270 LDSVAREFIR----EKGY-------------G-EFFGHSLGHGIGLEVHEGPAIS-------------FRNDSPLPENVV 318 (359)
T ss_dssp HHHHHHHHHH----HTTC-------------G-GGBCSCSEEECSSSSSEEEEES-------------TTCCCBCCTTBE
T ss_pred HHHHHHHHHH----HcCC-------------c-ccCCCCCccccCcccCCCCCcC-------------CCCCCCcCCCCE
Confidence 9999999874 4665 2 4788999999999999966332 235689999999
Q ss_pred EEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 406 ITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 406 ~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
||||||+|+ +|++|+||||+|+||++|+|+||..|+++.
T Consensus 319 ~tiEPgiy~--------------------------~~~~gvriEd~v~vt~~g~e~Lt~~~~~l~ 357 (359)
T 2zsg_A 319 FTVEPGIYL--------------------------EGKFGIRIEEDVVLKEQGCEILTTLPRSIF 357 (359)
T ss_dssp EEECCEEEE--------------------------TTTEEEECBEEEEEETTEEEECCCSCCSCE
T ss_pred EEECCEEEE--------------------------CCCcEEEEeeEEEEcCCcceECCCCCccce
Confidence 999999997 577899999999999999999999999864
No 10
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=5.4e-61 Score=487.25 Aligned_cols=347 Identities=26% Similarity=0.376 Sum_probs=274.9
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCC-----CEEEEEEeCCCeeEEe
Q 011203 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREP-----GFYGAIDIATGKSILF 93 (491)
Q Consensus 19 ~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~-----~~~lvi~~~~g~~~l~ 93 (491)
+|++||++.|++. ++ |++ ++. +.+||+|||||... .+++++ +.+++++||
T Consensus 1 ~R~~~l~~~m~~~----~~--d~~-li~-----------------~~~n~~yltG~~~~~~~~~~~~l~i-~~~~~~~l~ 55 (356)
T 1wn1_A 1 MRLEKFIHLLGER----GF--DGA-LIS-----------------PGTNLYYLTGLRLHEVGERLAILAV-SAEGDYRFL 55 (356)
T ss_dssp CHHHHHHHHHHHT----TC--SEE-EEC-----------------SSHHHHHHHCCCCSCCTTSCCEEEE-ETTSCEEEE
T ss_pred CHHHHHHHHHHHC----CC--cEE-EEC-----------------CCccceeecCCcCCCCCCceEEEEE-eCCCcEEEE
Confidence 4899999999885 66 544 442 34579999999632 244455 667889999
Q ss_pred ecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc--cccccc
Q 011203 94 APRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE--FETELN 171 (491)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~~ 171 (491)
++..+.. .|.+ .....+ .+...+.+.+.+.|.++. .+.++|++. +..+......+. ...+++
T Consensus 56 ~~~~~~~--~~~~--~~v~~~-----~~~~~~~~~l~~~l~~~~--~~~~~i~~~-----~~~~~~~~~~l~~~~~~~~~ 119 (356)
T 1wn1_A 56 APSLYEN--VVNN--FPATFW-----HDGENPYAKLREILEELG--ISKGRILIE-----DTMRADWLIGIMKLGKFTFQ 119 (356)
T ss_dssp EEGGGTT--TTTT--SCEEEE-----CTTSCHHHHHHHHHHHTT--CSSEEEEEC-----TTSBHHHHHHHGGGSCEEEE
T ss_pred ECcccHH--HhhC--CeEEEE-----cCCCCHHHHHHHHHHHhc--CCCCEEEEe-----CCcCHHHHHHHHcCCCCeEE
Confidence 9987543 2321 000000 011112455666665541 134577653 111111111111 134678
Q ss_pred chHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCccc
Q 011203 172 TLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVL 251 (491)
Q Consensus 172 ~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~ 251 (491)
++++.+..+|+|||++||+.||+|+++++.++..+++.++||+||.|+++.+...+.++ +...+|++++++|.|++.+
T Consensus 120 ~~~~~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~~~ 197 (356)
T 1wn1_A 120 PLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIREL--SDGIAFEPIVASGENAANP 197 (356)
T ss_dssp ETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGGCT
T ss_pred EcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh--CcCCCCCcEEEEecccccc
Confidence 89999999999999999999999999999999999999999999999999999988876 4567899999999999999
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011203 252 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 331 (491)
Q Consensus 252 h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~ 331 (491)
|+. |++++|++||+|++|+|+.|+|||+|+||||++ |+++++|+++|++++++++++++++|||++++||+.+++
T Consensus 198 H~~----~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~ 272 (356)
T 1wn1_A 198 HHE----PGERKIRKGDIIILDYGARWKGYCSDITRTIGL-GELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAR 272 (356)
T ss_dssp TCC----CCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHH
T ss_pred cCC----CCCCeecCCCEEEEEEEEEECCEEeccEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 965 489999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCc
Q 011203 332 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPG 411 (491)
Q Consensus 332 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg 411 (491)
+++. +.|| . .+|+|++|||||+++||.|.+. ..++.+|+||||||||||
T Consensus 273 ~~~~----~~g~-------------~-~~~~h~~GHgiGl~~he~p~i~-------------~~~~~~l~~Gmv~tiEPg 321 (356)
T 1wn1_A 273 EVIS----KAGY-------------G-EYFIHRTGHGLGLDVHEEPYIG-------------PDGEVILKNGMTFTIEPG 321 (356)
T ss_dssp HHHH----TTTC-------------G-GGCCSCSEEECSSSSSEEEEES-------------TTCCCBCCTTCEEEECCE
T ss_pred HHHH----HcCC-------------c-ccCCCCCcccCCCccCCCcccC-------------CCCCCCcCCCCEEEECCe
Confidence 9874 5665 2 4789999999999999966432 235689999999999999
Q ss_pred cccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 412 CYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 412 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
+|+ +|.+|+||||+|+||++|+|+||..|+++.
T Consensus 322 iy~--------------------------~g~~gvriEd~v~Vt~~g~e~Lt~~p~~l~ 354 (356)
T 1wn1_A 322 IYV--------------------------PGLGGVRIEDDIVVDEGKGRRLTKAERELI 354 (356)
T ss_dssp EEE--------------------------TTTEEEECBEEEEEETTEEEESCCCCCSCC
T ss_pred eEe--------------------------CCCcEEEEeeEEEEeCCccEECCCCCCcce
Confidence 997 567899999999999999999999999864
No 11
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=4.9e-61 Score=502.45 Aligned_cols=402 Identities=14% Similarity=0.140 Sum_probs=291.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhh----ccCCCCCCeEEEEecCcceeeecCCcccccccCCC-ceeecCCCCCCEEEEEE
Q 011203 10 PKVPKELYFINREKVLNSLRQHL----TETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESY-FAYLFGVREPGFYGAID 84 (491)
Q Consensus 10 ~~~~~~~~~~R~~rl~~~~~~~~----~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~-~~YLtG~~~~~~~lvi~ 84 (491)
+.|+.++|.+|+++|++.|++.. ...++ |+++|..+. .|...+|+|+++ |+|||||+.+++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~--Dalli~~~~-------~d~~~~y~q~~~~~~yLtG~~~~~~~lvi~ 76 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDC--DSILVTVGA-------HDDTNPYQKSTALHTWLLGYEFPSTLILLE 76 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTC--SEEEEEECS-------CCTTCCCCHHHHHHHHHHSSCCSSEEEEEE
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCC--CEEEEEeCC-------CCCCCCcccchhhhHHHhCCCCCCEEEEEe
Confidence 78999999999999999998610 00255 666665442 133458899987 89999999998877774
Q ss_pred eCCCeeEEeecCCCCc-ccccc-ccCCChhHHHHHhc--CceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCC--
Q 011203 85 IATGKSILFAPRLPPD-YAVWL-GKIKPLSYFQEKYM--VNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNF-- 158 (491)
Q Consensus 85 ~~~g~~~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~-- 158 (491)
.++++||++..+.. ...|. +...... + ..+. .+...+.+.+..++ +.++. ..++|++.. .+.....+
T Consensus 77 --~~~~~l~~~~~~~~y~~~~~~~~~~~~~-~-~~~~~~~d~~~~~~~~~~~~-~~l~~-~~~~ig~~~-~~~~~~~~~~ 149 (444)
T 3cb6_A 77 --KHRITILTSVNKANMLTKLAETKGAAAD-V-NILKRTKDAEENKKLFEKII-EYIRA-TNKKVGVFP-KDKTQGKFIN 149 (444)
T ss_dssp --TTEEEEEEEHHHHTTTHHHHTCTTCSSE-E-EEEEECSCHHHHHHHHHHHH-HHHHT-TTSEEEECT-TCCCCSHHHH
T ss_pred --CCcEEEEEcCchHHHHhhhhccccCCcc-E-EEEecccccccCHHHHHHHH-HHHHh-cCCEEEEec-cccchhHHHH
Confidence 35799999764321 12332 2111100 0 0000 00000111122222 22221 135776531 11111000
Q ss_pred CCccccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHH-HHH----HHccCC--CcHHHHHHHHHHHHH
Q 011203 159 SKPAQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHV-EVM----KKTRVG--MKEYQMESMFLHHTY 228 (491)
Q Consensus 159 ~~~~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~-~~~----~~i~~G--~tE~ei~a~~~~~~~ 228 (491)
.+...+. .+.+++++++++..+|+|||++||+.||+|+++++.++. .+. +.++|| +||.||++.+...+.
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~ 229 (444)
T 3cb6_A 150 EWDSIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLID 229 (444)
T ss_dssp HHHHHHTTTGGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGG
T ss_pred HHHHHHhhccCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHH
Confidence 0111111 124678899999999999999999999999999999999 554 788999 999999999888765
Q ss_pred Hc---C----C---C----CCCCcceEEeeCCCCc-ccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCC
Q 011203 229 MY---G----G---C----RHCSYTCICATGENSA-VLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNG 293 (491)
Q Consensus 229 ~~---~----g---~----~~~~~~~iv~sG~~~~-~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G 293 (491)
++ + | + ...+|++|+++|.|++ .+||. |++++|+ ||+|++|+|+.|+|||+|+||||++ |
T Consensus 230 ~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~----~~~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v-~ 303 (444)
T 3cb6_A 230 NEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAI----TDDRNLH-GDVVLCSLGFRYKSYCSNVGRTYLF-D 303 (444)
T ss_dssp CHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCC----CCSSBCC-SSEEEEEECEEETTEECCEEEEEEE-S
T ss_pred HhccccccccccccccccccccccCceEeccCCcCceeccC----CCCCccc-CCEEEEEEeEeeCCEeeeeeEEEEe-c
Confidence 31 1 2 2 2468999999999999 99965 4899998 9999999999999999999999999 6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcc
Q 011203 294 KFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDT 373 (491)
Q Consensus 294 ~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~ 373 (491)
++++|+++|++++++++++++++|||++++||+.++++++.+.+ .|| . .+|+|++|||||+++
T Consensus 304 -~~~~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~--~g~-------------~-~~~~h~~GHgiGl~~ 366 (444)
T 3cb6_A 304 -PDSEQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKR--PDL-------------E-PNFVRNLGAGIGIEF 366 (444)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHC--GGG-------------G-GGBCSCCEEECSSSS
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhh--hhh-------------H-hhcccccccccCccc
Confidence 89999999999999999999999999999999999999986520 022 2 478999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEE
Q 011203 374 HDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVL 453 (491)
Q Consensus 374 he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~ 453 (491)
||.|.+. +.+++.+|+||||||||||+|+... + +.+..++|.+|+||||+|+
T Consensus 367 he~p~~~------------~~~~~~~l~~Gmv~tiEPgiy~~~~--------~--------~~~~~~~~~~gvriEd~v~ 418 (444)
T 3cb6_A 367 RESSLLV------------NAKNPRVLQAGMTLNLSIGFGNLIN--------P--------HPKNSQSKEYALLLIDTIQ 418 (444)
T ss_dssp CBGGGCC------------STTCCCBCCTTCEEEEEEEEEEEEC--------S--------SCCTTSCSEEEEEEEEEEE
T ss_pred cCCcccc------------CCCCCcccCCCCEEEEEeccccccC--------c--------ccccccCCceEEEEEEEEE
Confidence 9965221 2345789999999999999995321 0 1122336778999999999
Q ss_pred EeCCCeeeCCCCCCCHHHHHHHHhC
Q 011203 454 VTANGSKNMTSVPREISDIEAIMAG 478 (491)
Q Consensus 454 Vte~G~e~LT~~p~~~~~ie~~~~~ 478 (491)
||++|+|+||.+|+++.+||++|+.
T Consensus 419 vt~~g~e~Lt~~p~~l~~Ie~~~~~ 443 (444)
T 3cb6_A 419 ITRSDPIVFTDSPKAQGDISYFFGE 443 (444)
T ss_dssp CCSSSCEETTCCCCSHHHHEECC--
T ss_pred ECCCCceecccCCCcHHHHHhhhcC
Confidence 9999999999999999999998864
No 12
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=4.3e-59 Score=472.34 Aligned_cols=339 Identities=27% Similarity=0.415 Sum_probs=267.6
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCE-EEEEEeCCCeeEEeecC
Q 011203 18 FINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGF-YGAIDIATGKSILFAPR 96 (491)
Q Consensus 18 ~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~-~lvi~~~~g~~~l~~~~ 96 (491)
.+|++||++.|++. ++ |++ ++. +.+|++|||||..+++ ++++++.++.+.++.++
T Consensus 5 ~~R~~~l~~~m~~~----~~--da~-li~-----------------~~~n~~yltg~~~~~~~~~llv~~~~~~l~~~~~ 60 (351)
T 1wy2_A 5 NEKVKKIIEFMDKN----SI--DAV-LIA-----------------KNPNVYYISGASPLAGGYILITGESATLYVPELE 60 (351)
T ss_dssp CHHHHHHHHHHHHT----TC--SEE-EEC-----------------SHHHHHHHHSCCCSSCCEEEEETTEEEEEEEHHH
T ss_pred HHHHHHHHHHHHHC----CC--CEE-EEC-----------------CCCCceEecCCCCCCCcEEEEEECCCcEEEECch
Confidence 58999999999885 66 554 442 2346999999987765 53454655544444343
Q ss_pred CCCccccccccCCChhHHHHHhcCceec--chhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc--c-ccccc
Q 011203 97 LPPDYAVWLGKIKPLSYFQEKYMVNMVY--YTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE--F-ETELN 171 (491)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~-~~~~~ 171 (491)
. ..+ ....+++-.. ..+.+.+.|. +.++|++. +..++.....+. + ..+++
T Consensus 61 ~--~~~------------~~~~~~~v~~~~~~~~l~~~l~------~~~~ig~e-----~~~~~~~~~~l~~~~~~~~~~ 115 (351)
T 1wy2_A 61 Y--EMA------------KEESNIPVEKFKKMDEFYKALE------GIKSLGIE-----SSLPYGFIEELKKKANIKEFK 115 (351)
T ss_dssp H--HHH------------HHHCSSCEEEESSHHHHHHHHT------TCSEEEEC-----TTCBHHHHHHHHHHSCCCEEE
T ss_pred H--HHH------------hhcCCCeEEEeCcHHHHHHHHc------cCCEEEEc-----CcCCHHHHHHHHhhCCCCeEE
Confidence 2 111 0111122111 1233444443 34678663 211111111121 1 22678
Q ss_pred chHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCccc
Q 011203 172 TLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVL 251 (491)
Q Consensus 172 ~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~ 251 (491)
++++.+..+|+|||++||+.||+|++++++++..+++.++||+||.|+++.+...+.++ |+...+|++++++|.|++.+
T Consensus 116 ~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-g~~~~~f~~iv~~g~n~~~~ 194 (351)
T 1wy2_A 116 KVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMN-GAEKPAFDTIIASGYRSALP 194 (351)
T ss_dssp ECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGGGGGST
T ss_pred EcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCCCCCCCCEEEEccccccc
Confidence 89999999999999999999999999999999999999999999999999999888765 77778999999999999999
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011203 252 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 331 (491)
Q Consensus 252 h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~ 331 (491)
|+. |++++|++||+|++|+|+.|+|||+|+||||++ |+++++|+++|++++++++++++++|||++++||+.+++
T Consensus 195 H~~----~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~ 269 (351)
T 1wy2_A 195 HGV----ASDKRIERGDLVVIDLGALYQHYNSDITRTIVV-GSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDSIAR 269 (351)
T ss_dssp TCB----CCSCBCCTTCEEEEEECEEETTEECCEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHH
T ss_pred cCC----CCCcccCCCCEEEEEEEEEECCEEecceEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 965 489999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCc
Q 011203 332 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPG 411 (491)
Q Consensus 332 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg 411 (491)
+++. +.|+ . .+|+|++|||||+++||.|.+ +.+++.+|+||||||||||
T Consensus 270 ~~~~----~~g~-------------~-~~~~h~~GHgiGl~~hE~p~i-------------~~~~~~~l~~Gmv~tiEPg 318 (351)
T 1wy2_A 270 NIIA----EYGY-------------G-EYFNHSLGHGVGLEVHEWPRV-------------SQYDETVLREGMVITIEPG 318 (351)
T ss_dssp HHHH----HTTC-------------G-GGCCSCSEEECSSSSSEEEEE-------------STTCCCBCCTTCEEEECCE
T ss_pred HHHH----HcCC-------------c-ccCCCCcccccCCCcCCCCcc-------------CCCCCCCcCCCCEEEECCE
Confidence 9874 4665 2 477999999999999996532 2245689999999999999
Q ss_pred cccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCee-eCCCCCCCH
Q 011203 412 CYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSK-NMTSVPREI 469 (491)
Q Consensus 412 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e-~LT~~p~~~ 469 (491)
+|+ +|.+|+||||+|+|| +|+| +||..|+++
T Consensus 319 iy~--------------------------~g~~gvriEd~v~Vt-~G~e~~Lt~~p~~l 350 (351)
T 1wy2_A 319 IYI--------------------------PKIGGVRIEDTILIT-KNGSKRLTKTEREL 350 (351)
T ss_dssp EEE--------------------------TTTEEEECBEEEEEE-TTEEEESCCSCSCC
T ss_pred EEe--------------------------CCCCeEEEeeEEEEC-CCceecCCCCCccc
Confidence 997 567899999999999 9999 999999875
No 13
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=1.7e-58 Score=486.10 Aligned_cols=399 Identities=13% Similarity=0.144 Sum_probs=289.7
Q ss_pred CCCCHHHHHHHHHHHHHHhh--hhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCC
Q 011203 10 PKVPKELYFINREKVLNSLR--QHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIAT 87 (491)
Q Consensus 10 ~~~~~~~~~~R~~rl~~~~~--~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~ 87 (491)
+.|+.++|.+|+++|++.|+ +. ++ |+++|..+.. ..+..|+ ++.+.++|||||+.+.++++| +.+
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~----gi--Da~li~~~~~-----~~~~~y~-~~~~~~~yLtGf~~~~~~lvV-t~d 72 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEG----SP--NSLLFVLGSS-----NAENPYQ-KTTILHNWLLSYEFPATLIAL-VPG 72 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTT----CC--SEEEEEECSC-----CTTSTTC-HHHHHHHHHHSSCCSSEEEEE-ETT
T ss_pred cccCHHHHHHHHHHHHHHHHhhhc----CC--CEEEEEcCCC-----CCCCCCc-cchhhhhHhhCCCCCCEEEEE-ECC
Confidence 67999999999999999998 64 66 6666654321 1234455 666667899999888877777 434
Q ss_pred CeeEEeecCCCCc----c----ccccccCCChhHHHHH-hcCc-eecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCC
Q 011203 88 GKSILFAPRLPPD----Y----AVWLGKIKPLSYFQEK-YMVN-MVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNN 157 (491)
Q Consensus 88 g~~~l~~~~~~~~----~----~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~ 157 (491)
+++||++..+.. . +.|... ..++.+... ...+ ...+.+.+.+.|.+. .++|++.. .+..+
T Consensus 73 -~~~L~~d~~~~~y~~~a~~~~e~~~~~-~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~-----~~~Igv~~---~~~~s 142 (467)
T 3biq_A 73 -KVIIITSSAKAKHLQKAIDLFKDPESK-ITLELWQRNNKEPELNKKLFDDVIALINSA-----GKTVGIPE---KDSYQ 142 (467)
T ss_dssp -EEEEEEEHHHHHHHHHHHGGGCC--CC-CEEEEEEECTTCHHHHHHHHHHHHHHHHHH-----CSEEEECT---TCCCC
T ss_pred -eEEEEECCcchHHHHHHhhhcccccCC-CCeEEEEecccccccchhhHHHHHHHHHhh-----CCEEEEec---Ccccc
Confidence 599999876421 1 112100 000000000 0000 001123344444432 35776521 11111
Q ss_pred CCCccccc--c-------cccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccC------CCcHHHHHHH
Q 011203 158 FSKPAQFE--F-------ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRV------GMKEYQMESM 222 (491)
Q Consensus 158 ~~~~~~~~--~-------~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~------G~tE~ei~a~ 222 (491)
......+. + +.+++++.+++..+|+|||++||+.||+|+++++.++..+++.++| |+||.||++.
T Consensus 143 ~~~~~~L~~~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el~~~ 222 (467)
T 3biq_A 143 GKFMTEWNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDK 222 (467)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHH
T ss_pred hhHHHHHHHHHHhhcccCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHHHHH
Confidence 11111111 1 3567888999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHH-----cC------------CC----CCCCcceEEeeCCCCc-ccccCCCCCCCCCccCCCCeEEEEeceEeCc
Q 011203 223 FLHHTYM-----YG------------GC----RHCSYTCICATGENSA-VLHYGHAAAPNDRTFEDGDMALLDMGAEYQF 280 (491)
Q Consensus 223 ~~~~~~~-----~~------------g~----~~~~~~~iv~sG~~~~-~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~g 280 (491)
+...+.+ ++ ++ ...+|++|+++|.|++ .+||. |++++|++||+|++|+|+.|+|
T Consensus 223 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~----~~~~~l~~gd~v~iD~g~~~~g 298 (467)
T 3biq_A 223 IENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSAR----STNDQLYGNGCILASCGIRYNN 298 (467)
T ss_dssp HHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCC----CCSSBCCCSEEEEEEECEEETT
T ss_pred HHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccC----CCCCccCCCCEEEEEEeEEECC
Confidence 9887764 32 13 2578999999999998 99965 4899999999999999999999
Q ss_pred eEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccc
Q 011203 281 YGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINA-MKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAV 359 (491)
Q Consensus 281 Y~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~-lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~ 359 (491)
||+|+||||++ | ++++|+++|+++++++++++++ +|||++++||+.++++++.+ .|+ ++. .
T Consensus 299 y~sD~tRT~~~-g-~~~~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~----~g~-----------g~~-~ 360 (467)
T 3biq_A 299 YCSNITRTFLI-D-PSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEK----TKP-----------ELV-P 360 (467)
T ss_dssp EECCEEEEEEE-S-CCHHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHH----HCG-----------GGG-G
T ss_pred EEeeeeEEEEe-C-CCHHHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHH----hCc-----------chh-h
Confidence 99999999999 7 8999999999999999999999 99999999999999999864 331 122 4
Q ss_pred cCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCC-CCccCCCCEEEECCccc-cccccccccccccccccccccchh
Q 011203 360 FMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRT-VRELQERMVITVEPGCY-FIDALLVPAMENESTSKFFNHEVI 437 (491)
Q Consensus 360 ~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~-~~~L~~Gmv~~iepg~y-~~~~~~~~~~~~~~~~~~~~~~~~ 437 (491)
+|+|++|||||+++||.|.+. +.++ +.+|+||||||||||+| +. .+
T Consensus 361 ~~~h~~GHgiGl~~hE~p~~~------------~~~~~~~~l~~Gmv~tiEPgiy~~~---------~~----------- 408 (467)
T 3biq_A 361 NFTKNIGSLIGLEFRDSNFIL------------NVKNDYRKIQRGDCFNISFGFNNLK---------DS----------- 408 (467)
T ss_dssp GBCSCCEEECSSSSCCGGGBS------------STTCCSCCCCTTCEEEEEEEEEEEC---------CS-----------
T ss_pred cCCCCcccccccccccCCccC------------CCCCCCCccCCCCEEEEeCeEEeee---------cC-----------
Confidence 789999999999999966311 2245 78999999999999999 41 00
Q ss_pred cccCCcceeEEceEEEEe--CCCeeeCC-CCCCCHHHHHHHHhCCCCCCCCC
Q 011203 438 GRFKDFGGVRIESDVLVT--ANGSKNMT-SVPREISDIEAIMAGAPWPSNKT 486 (491)
Q Consensus 438 ~~~~g~ggvried~v~Vt--e~G~e~LT-~~p~~~~~ie~~~~~~~~~~~~~ 486 (491)
..+|.+|+||||+|+|| ++|+|+|| .+|+++..|+++|+.......+.
T Consensus 409 -~~~g~~gvriEd~v~Vt~~~~G~e~Lt~~~p~~~~~i~~~~~~~~e~~~~~ 459 (467)
T 3biq_A 409 -QSANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEEEDNNKK 459 (467)
T ss_dssp -SCSSCEEEEEEEEEECCSSTTSCCEESCCSCCCHHHHEECC----------
T ss_pred -CCCCccEEEEEEEEEEecCCCCcEEecccCCCCHHHHHHHHhccccccccc
Confidence 01467899999999999 99999999 99999999999998877755333
No 14
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.3e-56 Score=463.08 Aligned_cols=368 Identities=16% Similarity=0.176 Sum_probs=275.5
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC----EE
Q 011203 6 SLSPP-KVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG----FY 80 (491)
Q Consensus 6 ~~~~~-~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~----~~ 80 (491)
++..+ .|+.++|.+|+++|++.|++. ++ |++ |+.+ ..|++|||||...+ .+
T Consensus 12 ~~~~~~~~~~~e~~~Rl~~Lr~~m~~~----~l--Da~-li~~-----------------~~ni~yltgf~~s~~~~p~~ 67 (402)
T 1kp0_A 12 GZKKYTPFSZAEMTRRZBRLRAWMAKS----BI--DAV-LFTS-----------------YHNINYYSGWLYCYFGRKYA 67 (402)
T ss_dssp SCCCCCSSCHHHHHHHHHHHHHHHHHH----TC--SEE-EECS-----------------HHHHHHHHSCCCCCTTCCCE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHC----CC--CEE-EEcC-----------------CCCceEecCCCCCCCCceEE
Confidence 44444 899999999999999999985 66 554 4422 23588999996421 23
Q ss_pred EEEEeCCCeeEEeecCCCCccccccccCCChhHHHHHhcCceec---c-hhHHHHHHHhcccCCCCCeEEEecCCCCCCC
Q 011203 81 GAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVY---Y-TDEIVGVLQGHYKEPGKPLLFLLHGLNTDSN 156 (491)
Q Consensus 81 lvi~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~ 156 (491)
+++ +.+ +++||++..+.... +. +..+ ..+. + ...+.+.|.++++ +.++|++ +.+..
T Consensus 68 llV-~~~-~~~l~~~~~~~~~a-~~----------~~~~-~~v~~~~~~~~~~~~~l~~~l~--~~~~igv----d~~~~ 127 (402)
T 1kp0_A 68 ZVI-BZV-KAVTISKGIDGGMP-WR----------RSFG-BNIVYTDWKRDNFYSAVKKLVK--GAKZIGI----EHDHV 127 (402)
T ss_dssp EEE-CSS-CEEEEEEGGGTTHH-HH----------HCSS-EEEEECSSSTTHHHHHHHHHHT--TCSEEEE----CTTTC
T ss_pred EEE-eCC-CCEEEeccchhhhh-HH----------hccC-cceEeccccccCHHHHHHHHhc--cCCEEEE----ecCCC
Confidence 344 444 48888886543211 00 0000 0000 0 1223344444443 3467865 22221
Q ss_pred CCCCccccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC
Q 011203 157 NFSKPAQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC 233 (491)
Q Consensus 157 ~~~~~~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~ 233 (491)
++.....+. .+.+++++++++..+|+|||++||+.||+|+++++.+++.+++.++||+||.|+++.+...+.++ |+
T Consensus 128 ~~~~~~~l~~~l~~~~~v~~~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-g~ 206 (402)
T 1kp0_A 128 TLBHRRZLZKALPGTEFVDVGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZ-IA 206 (402)
T ss_dssp BHHHHHHHHHHSTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHH-HH
T ss_pred CHHHHHHHHHhCCCCEEEECHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHh-cc
Confidence 111111111 13567888999999999999999999999999999999999999999999999999988887765 32
Q ss_pred C-C-----CCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHH
Q 011203 234 R-H-----CSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVL 307 (491)
Q Consensus 234 ~-~-----~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~ 307 (491)
. . ..+++++++|.|++.+|+. |++++|++||+|++|+|+.|+|||+|+||||++ |+++++|+++|++++
T Consensus 207 ~~~~~~~~~~~~~iv~~g~n~~~~H~~----~~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~-G~~~~~~~~~~~~v~ 281 (402)
T 1kp0_A 207 RBFPYVELMDTWIWFQSGINTDGAHNP----VTBRVVZRGDILSLNCFPMIFGYYTALERTLFL-ZZVBDASLZIWZKNT 281 (402)
T ss_dssp HHSSSCEEEEEEEEEEEGGGGGSTTCC----EECCBCCTTCEEEEEEEEEETTEECCEEEEEEE-SCCCHHHHHHHHHHH
T ss_pred cccCcccccCccceeecccccccccCC----CCCcccCCCCEEEEEEEeeECCEeeecEEEEEc-CCCCHHHHHHHHHHH
Confidence 1 1 1334589999999999964 489999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCC
Q 011203 308 KAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSK 387 (491)
Q Consensus 308 ~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~ 387 (491)
++++++++++|||++++||++++++++ ++.||. .+++|++||+||+++||.|... |.
T Consensus 282 ~a~~~~~~~~~pG~~~~~i~~~~~~~~----~~~G~~--------------~~~~~~~GHgiG~~~He~~~~~-g~---- 338 (402)
T 1kp0_A 282 AVHRRGLZLIKPGARCKDIASELNBMY----RZWDLL--------------RYRTFGYGHSFGVLBHYYGREA-GV---- 338 (402)
T ss_dssp HHHHHHHHHCCTTCBHHHHHHHHHHHH----HHTTCG--------------GGBCSCSCBBCEEEETTEECCT-TC----
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHH----HHcCCC--------------eecCCCcccccCCccccCCccc-Cc----
Confidence 999999999999999999999999886 457762 4788999999999999965321 11
Q ss_pred CCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCC
Q 011203 388 EPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPR 467 (491)
Q Consensus 388 ~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~ 467 (491)
.....++.+|+||||||||||+|+... ..|.+|+|+||+|+||++|+|+||..|+
T Consensus 339 ---~~~~~~~~~l~~Gmv~tiEPgiy~~~~----------------------~~~~~G~ried~v~Vt~~g~e~Lt~~p~ 393 (402)
T 1kp0_A 339 ---ELREDIZTVLEPGMVVSMEPMVMBPEG----------------------EPGAGGYREHDILVIKENBTENITGFPF 393 (402)
T ss_dssp ---BCCTTCCCBCCTTCEEEECCEEEECTT----------------------STTCEEEECBEEEEEETTEEEECCCSCC
T ss_pred ---ccCCCCCCccCCCcEEEECCceeecCc----------------------cCCCCcEEEEEEEEEcCCcceECCCCCC
Confidence 012245789999999999999997320 0266899999999999999999999998
Q ss_pred CHHH
Q 011203 468 EISD 471 (491)
Q Consensus 468 ~~~~ 471 (491)
++.+
T Consensus 394 ~~~~ 397 (402)
T 1kp0_A 394 GPEH 397 (402)
T ss_dssp STTT
T ss_pred chHH
Confidence 7653
No 15
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=4.3e-56 Score=458.62 Aligned_cols=368 Identities=17% Similarity=0.207 Sum_probs=274.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCC---CEEEEEEe
Q 011203 9 PPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREP---GFYGAIDI 85 (491)
Q Consensus 9 ~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~---~~~lvi~~ 85 (491)
+..|+.++|.+|++||++.|++. ++ |++ |+.+ ..|++|||||... ...+++++
T Consensus 15 ~~~~~~~e~~~R~~~l~~~m~~~----~~--da~-li~~-----------------~~ni~yltg~~~~~~~~~~~llv~ 70 (401)
T 1chm_A 15 RSTFSAQEYANRQARLRAHLAAE----NI--DAA-IFTS-----------------YHNINYYSDFLYCSFGRPYALVVT 70 (401)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHT----TC--SEE-EECS-----------------HHHHHHHHSCCCCCTTCCCEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHC----CC--CEE-EEeC-----------------cccceeeCCCCcCCCCCeEEEEEe
Confidence 44799999999999999999985 56 444 4422 2458899998531 12234435
Q ss_pred CCCeeEEeecCCCCccccccccCCChhHHHHHhcCceecc----hhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCc
Q 011203 86 ATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYY----TDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKP 161 (491)
Q Consensus 86 ~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 161 (491)
.++ .++|++..+... .|. +..+.+.+.+ .+++.+.|.++++ +.++|++ +.+..++...
T Consensus 71 ~~~-~~l~~~~~~~~~-~~~----------~~~~~~~v~~~~~~~~~~~~~l~~~l~--~~~~i~v----e~~~~~~~~~ 132 (401)
T 1chm_A 71 EDD-VISISANIDGGQ-PWR----------RTVGTDNIVYTDWQRDNYFAAIQQALP--KARRIGI----EHDHLNLQNR 132 (401)
T ss_dssp SSC-EEEEEEGGGTTH-HHH----------HCCSSEEEEECTTSTTHHHHHHHHHCS--CCSEEEE----CTTTCBHHHH
T ss_pred cCC-CEEEecccchhh-HHH----------hhcccceeeeccccccCHHHHHHHHhc--cCCeEEE----ecCCCCHHHH
Confidence 444 777877554332 121 0011111111 1344555666543 3467865 3222111111
Q ss_pred cccc---ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC---CCC
Q 011203 162 AQFE---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGG---CRH 235 (491)
Q Consensus 162 ~~~~---~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g---~~~ 235 (491)
..+. ...+++++++.+..+|+|||++||+.||+|+++++.++..+.+.++||+||.|+++.+...+.+++. ...
T Consensus 133 ~~l~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~~~~~~~~~ 212 (401)
T 1chm_A 133 DKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDV 212 (401)
T ss_dssp HHHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHhhCCCCEEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhccccCCCc
Confidence 1121 2356788999999999999999999999999999999999999999999999999988777665311 111
Q ss_pred CCcce--EEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHH
Q 011203 236 CSYTC--ICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAV 313 (491)
Q Consensus 236 ~~~~~--iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~ 313 (491)
..|++ ++++|.|+..+|+. |++++|++||+|++|+|+.|+|||+|+||||++ |+++++|+++|++++++++++
T Consensus 213 ~~~~~~~~~~~g~n~~~~H~~----~~~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~-G~~~~~~~~~y~~v~~a~~~~ 287 (401)
T 1chm_A 213 ELMDTWTWFQSGINTDGAHNP----VTTRKVNKGDILSLNCFPMIAGYYTALERTLFL-DHCSDDHLRLWQVNVEVHEAG 287 (401)
T ss_dssp CBCCCEEEEEEGGGGGSTTCC----EESCBCCTTCEEEEEEECEETTEECCEEEEEEE-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCcceeeeecccccccccC----CCCCccCCCCEEEEEEEEeeCCEeecceEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 23454 57999999999954 489999999999999999999999999999999 999999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcC
Q 011203 314 INAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKS 393 (491)
Q Consensus 314 ~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~ 393 (491)
++++|||++++||+++++++++ +.||. .+++|++||+||+++||.|... |. ...
T Consensus 288 i~~~~pG~~~~~v~~~~~~~~~----~~G~~--------------~~~~~~~GHgiG~~~h~~~~~~-g~-------~~~ 341 (401)
T 1chm_A 288 LKLIKPGARCSDIARELNEIFL----KHDVL--------------QYRTFGYGHSFGTLSHYYGREA-GL-------ELR 341 (401)
T ss_dssp HHHCCTTCBHHHHHHHHHHHHH----HHTCG--------------GGBCSCSCBBCSBEETTEECCT-TS-------BCC
T ss_pred HHHcCCCCcHHHHHHHHHHHHH----HcCCC--------------cccCCCCCcccCccCCcccccc-Cc-------ccc
Confidence 9999999999999999998874 45652 4678999999999999865311 10 012
Q ss_pred cCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHH
Q 011203 394 LRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISD 471 (491)
Q Consensus 394 ~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~ 471 (491)
..++.+|+||||||||||+|+... ..|.+|+|+||+|+||++|+|+||..|+++.+
T Consensus 342 ~~~~~~L~~Gmv~tiEPgiy~~~~----------------------~~g~~GvriEd~vlVt~~G~e~LT~~p~~~~~ 397 (401)
T 1chm_A 342 EDIDTVLEPGMVVSMEPMIMLPEG----------------------LPGAGGYREHDILIVNENGAENITKFPYGPEK 397 (401)
T ss_dssp TTCCCBCCTTCEEEECCEEEECTT----------------------STTCEEEECBEEEEEETTEEEECCCSCCSHHH
T ss_pred CCCCCccCCCCEEEEcCeeeeccc----------------------cCCCCeEEEeeeEEECCCcceECCCCCCChhh
Confidence 245789999999999999997320 12668999999999999999999999998865
No 16
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=7.1e-57 Score=469.59 Aligned_cols=372 Identities=15% Similarity=0.116 Sum_probs=279.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCC--------CCEE
Q 011203 9 PPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVRE--------PGFY 80 (491)
Q Consensus 9 ~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~--------~~~~ 80 (491)
..+....+|.+|++||++.|++. ++ |+++|. +..|++|||||.. +..+
T Consensus 71 ~~p~~~~~~~~Rl~rlr~~m~~~----gl--Dalli~------------------~~~ni~YlTGf~g~~~~~~~~~~~~ 126 (470)
T 4b28_A 71 DLPDLAAMRRFRHRRLTDHVVAR----GY--AGLLMF------------------DPLNIRYATDSTNMQLWNTHNPFRA 126 (470)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHT----TC--SEEEEC------------------SHHHHHHHHCCCSSHHHHHHSCCCE
T ss_pred CCCChHHHHHHHHHHHHHHHHHc----CC--CEEEEc------------------CCCcceeecCCCCCcccccCCCCEE
Confidence 34567899999999999999985 67 555443 3357999999984 3344
Q ss_pred EEEEeCCCeeEEeecCCCCcc---ccccccCCC---hhHHHHHhcC--ceecchhHHHHHHHhcccCCCCCeEEEecCCC
Q 011203 81 GAIDIATGKSILFAPRLPPDY---AVWLGKIKP---LSYFQEKYMV--NMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLN 152 (491)
Q Consensus 81 lvi~~~~g~~~l~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~ 152 (491)
++| +.+|.++|+.++..... ..|...+.. +..+.....+ ....+.+.+.+.|+++. .+.++|++ +
T Consensus 127 llV-~~dg~~~l~d~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~igv----e 199 (470)
T 4b28_A 127 TLL-CADGYMVMWDYKNSPFLSEFNPLVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHA--PGLRRLAV----D 199 (470)
T ss_dssp EEE-ETTSCEEEECCTTCGGGGTTCTTSCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHS--TTCCEEEE----S
T ss_pred EEE-ECCCCEEEEecchhhhhhhhhhHHHHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhC--ccCceeee----C
Confidence 444 67888777544431111 112211111 0001100000 00112345666666651 12577876 3
Q ss_pred CCCCCCCCccccc-ccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCC-----cHHHHHHHHHHH
Q 011203 153 TDSNNFSKPAQFE-FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGM-----KEYQMESMFLHH 226 (491)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~-----tE~ei~a~~~~~ 226 (491)
... +.....+. .+++++++++++..+|+|||++||++||+|+++++.+++.+++.++||+ ||.||++.+...
T Consensus 200 ~~~--~~~~~~L~~~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~ 277 (470)
T 4b28_A 200 KVM--LHGLRALQAQGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSE 277 (470)
T ss_dssp SCC--HHHHHHHHHTTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHH
T ss_pred cch--HHHHHHHHcCCCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 221 11111222 3567889999999999999999999999999999999999999999999 999999999988
Q ss_pred HHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceE-eCceEeeeeeEEeeCC--CCCHHHHHHH
Q 011203 227 TYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAE-YQFYGSDITCSFPVNG--KFTSDQSLIY 303 (491)
Q Consensus 227 ~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~-~~gY~sd~tRt~~v~G--~~~~~~~~~~ 303 (491)
+.++ |+. .+|.+|++||+|++.+|+.+ ++++|++||+|++|+|+. |+|||+|+||||++ | +|+++|+++|
T Consensus 278 ~~~~-G~~-~~~~~ivasG~n~~~~H~~~----~~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~v-G~~~~s~~~~~~y 350 (470)
T 4b28_A 278 NVRR-GGE-WIETRLLASGPRSNPWFQEC----GPRVCQRNEIISFDTDLVGAYGICTDISRSWWI-GDQKPRADMIYAM 350 (470)
T ss_dssp HHTT-TCC-EESCCCEEEGGGGSSTTCCC----CSCBCCSSEEEEEECCEECGGGCEECCEEEEEE-SSSCCCHHHHHHH
T ss_pred HHHc-CCC-cCCCceeEEcCccccCCCCC----CCccccCCCEEEEEecccccCeEEEeeEEEEEE-CCCCCCHHHHHHH
Confidence 8765 554 46778999999999999654 899999999999999998 99999999999999 7 7999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCC
Q 011203 304 NAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGT 383 (491)
Q Consensus 304 ~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~ 383 (491)
++++++++++++++|||++++||+.++++++.+ .| ..+.|++|||||+ +||.|.++..
T Consensus 351 ~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~----~~----------------~~~~~~~GHGIGl-~HE~P~i~~~- 408 (470)
T 4b28_A 351 QHGVEHIRTNMEMLKPGVMIPELSANTHVLDAK----FQ----------------KQKYGCLMHGVGL-CDEWPLVAYP- 408 (470)
T ss_dssp HHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHH----HH----------------TTCCSCSEEEESS-SEEEEEECCT-
T ss_pred HHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----hh----------------hcCCCCccCCCCc-CCCCCcccCc-
Confidence 999999999999999999999999999887643 11 1234889999999 6997744311
Q ss_pred CCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC
Q 011203 384 ERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 463 (491)
Q Consensus 384 ~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT 463 (491)
+.+....++.+|+||||||||||+|.. +|.+|+||||+|+||++|+|+||
T Consensus 409 -----~~~~~~~~~~~L~~GMV~tiEPgiy~~-------------------------~g~~GvriEd~vlVte~G~e~LT 458 (470)
T 4b28_A 409 -----DHAVAGAYDYPLEPGMTLCVEALISEE-------------------------GGDFSIKLEDQVLITEDGYENLT 458 (470)
T ss_dssp -----TTCCTTSSCCBCCTTCEEEEEEEEECT-------------------------TCSCEEEEEEEEEECSSSEEECC
T ss_pred -----cccccCCCCCEECCCCEEEEcCeeecC-------------------------CCcEEEEEeeEEEEeCCcCeECC
Confidence 011123467899999999999999862 35689999999999999999999
Q ss_pred CCCCCHHHH
Q 011203 464 SVPREISDI 472 (491)
Q Consensus 464 ~~p~~~~~i 472 (491)
.+|+++..|
T Consensus 459 ~~p~~l~li 467 (470)
T 4b28_A 459 KYPFDPALM 467 (470)
T ss_dssp CCCCCHHHH
T ss_pred CCCCcHHhc
Confidence 999998765
No 17
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=3.5e-53 Score=412.76 Aligned_cols=253 Identities=19% Similarity=0.199 Sum_probs=211.5
Q ss_pred hHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccC
Q 011203 180 CRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYG 254 (491)
Q Consensus 180 lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~ 254 (491)
||+|||++||++||+|+++++++++.+++.++||+||.||++.+...+.++ |+. ..+|++++++|.|++.+|+.
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~v~~g~~~~~~H~~ 79 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESH-GGVAAQIGYEGYKYATCCSINDEICHGF 79 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCCSEEEEETTEEECCC
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHc-CCCcccccccCCCcceEECCcccccCCC
Confidence 689999999999999999999999999999999999999999999988876 443 23567889999999999965
Q ss_pred CCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 255 HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 255 ~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
|++++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||+.++++++
T Consensus 80 ----~~~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~ 154 (264)
T 3tb5_A 80 ----PRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVV-GESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYV 154 (264)
T ss_dssp ----CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHH
T ss_pred ----CCCccccCCCEEEEeccceecceeeeccccccc-CCccHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Confidence 499999999999999999999999999999999 999999999999999999999999999999999999999887
Q ss_pred HHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 335 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 335 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
. +.|+ ..+.|.+|||+|+.+||.|..+ ......++.+|+||||||||||+|+
T Consensus 155 ~----~~g~---------------~~~~~~~GHgiG~~~~e~p~i~---------~~~~~~~~~~L~~Gmv~tiEPgiy~ 206 (264)
T 3tb5_A 155 E----GEGY---------------GVVRDFVGHGIGPTIHESPMIP---------HYGEAGKGLRLKEGMVITIEPMVNT 206 (264)
T ss_dssp H----HTTC---------------EECCSCCEEECSSSSSEEEEEC---------SSCCTTCSCBCCTTCEEEECCEEES
T ss_pred H----HcCC---------------ceeeeceecCCCCCCccCCccC---------ccccCCCCCCccCCcEEEEeeeEEc
Confidence 4 4565 3567889999999999966432 1222345679999999999999998
Q ss_pred ccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHHHHHH
Q 011203 415 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAI 475 (491)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~ie~~ 475 (491)
....+.-+. | +|.+... +|.+|+||||||+||++|+|+||..|++|.+||..
T Consensus 207 ~~~~~~~~~-d-------~wt~~~~-~g~~gvriEd~vlVT~~G~e~LT~~p~el~~ie~~ 258 (264)
T 3tb5_A 207 GTWRMKMDP-N-------GWTAYTE-DGGLSCQYEHSLAITKEGPRILTSQGEELTYLEHH 258 (264)
T ss_dssp SCSCEEECT-T-------SSCEEET-TCCCEEECCEEEECCTTCCEETTCCSSTTCC----
T ss_pred CCCceEEcC-C-------CCeEEec-CCccEEEeceEEEEcCCcCEECCCCCcchhhhhcc
Confidence 543221111 1 1222222 23459999999999999999999999999999854
No 18
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-52 Score=452.63 Aligned_cols=373 Identities=20% Similarity=0.211 Sum_probs=274.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC--------EEEE
Q 011203 11 KVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG--------FYGA 82 (491)
Q Consensus 11 ~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~--------~~lv 82 (491)
.|+.+.|.+|+++|++.|++. ++ + .+|+.+ ..|+.||||+...+ .+++
T Consensus 172 ~~ag~~~~~rl~~lr~~m~e~----~~--d-allit~-----------------~~~i~yl~~~~G~dv~~~pi~~~~ll 227 (623)
T 3ctz_A 172 DYTGISWKDKVADLRLKMAER----NV--M-WFVVTA-----------------LDEIAWLFNLRGSDVEHNPVFFSYAI 227 (623)
T ss_dssp HHHSSCHHHHHHHHHHHHHTT----TE--E-EEEECC-----------------HHHHHHHHTEECCSSSSSCCCSCEEE
T ss_pred hhcChhHHHHHHHHHHHHHHc----CC--C-EEEECC-----------------HHHHHHHhCCCCccCCCCcceeEEEE
Confidence 356677999999999999875 55 3 344432 34588999986431 2344
Q ss_pred EEeCCCeeEEeecCCCCcc---ccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCC-CCCeEEEecCCCCCCCCC
Q 011203 83 IDIATGKSILFAPRLPPDY---AVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEP-GKPLLFLLHGLNTDSNNF 158 (491)
Q Consensus 83 i~~~~g~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~i~~~~g~~~~~~~~ 158 (491)
| +.+ +++||++...... ..+........ ...+ -.+.+.+++.+.|+.+.... +.++|++... ..+
T Consensus 228 v-~~~-~~~l~v~~~~~~~~~~~~~l~~~~~~p---~~~~-v~v~~y~~~~~~l~~l~~~~~~~~~i~id~~-----~~~ 296 (623)
T 3ctz_A 228 I-GLE-TIMLFIDGDRIDAPSVKEHLLLDLGLE---AEYR-IQVHPYKSILSELKALCADLSPREKVWVSDK-----ASY 296 (623)
T ss_dssp E-ESS-CEEEECCSGGGGSHHHHHHTTTTSCCC---GGGC-EEEECGGGHHHHHHHHHHTCCTTCEEEEETT-----SBH
T ss_pred E-ecC-CcEEEEechhcCHHHHHHHHhhccccc---cCCc-eEEEEhHHHHHHHHHHHhcccCCeEEEECch-----hhH
Confidence 4 544 4899998643211 11100000000 0001 12333445555565543211 2367776321 111
Q ss_pred CCcccccccccccchHHHHHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHH----Hc-cCCCcHHHHHHHHHHHHHHcCCC
Q 011203 159 SKPAQFEFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMK----KT-RVGMKEYQMESMFLHHTYMYGGC 233 (491)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~----~i-~~G~tE~ei~a~~~~~~~~~~g~ 233 (491)
.....+.....+++....+..+|+|||+.||+.||+|+.++..++..++. .+ +||+||.|+++.+.....+..|+
T Consensus 297 ~l~~~l~~~~~~v~~~~~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~g~ 376 (623)
T 3ctz_A 297 AVSETIPKDHRCCMPYTPICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADF 376 (623)
T ss_dssp HHHHHSCGGGEEEESSCHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTE
T ss_pred HHHHhccccceEEecccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcCCC
Confidence 11111211123556667799999999999999999999999999887774 46 89999999999987655444465
Q ss_pred CCCCcceEEeeCCCCcccccCCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHH
Q 011203 234 RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAV 313 (491)
Q Consensus 234 ~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~ 313 (491)
.+.+|++|+++|+|++++||.+ ..+++++|++||+|++|+|+.|+||++|+||||++ |+|+++|+++|+.+++++.++
T Consensus 377 ~~~sf~~iv~~G~n~a~~H~~~-~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~v-G~~s~~~~~~y~~vl~a~~~~ 454 (623)
T 3ctz_A 377 VDLSFPTISSTGPTGAIIHYAP-VPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHF-ETPTAYEKECFTYVLKGHIAV 454 (623)
T ss_dssp EEESSCCEEEEGGGGGCTTCCC-CGGGCCBCCTTSCEEEEECEEETTEECCEEEEECS-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceeeecCccccccCCC-CCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 6689999999999999999875 22248999999999999999999999999999999 999999999999999999999
Q ss_pred HHHhCC-CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC--CcccCCCC-CCCCCCCCCCC
Q 011203 314 INAMKP-GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGG-YPKGTERSKEP 389 (491)
Q Consensus 314 ~~~lkp-G~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~-~~~~~~~~~~~ 389 (491)
+++++| |+++.+|+.++++++ ++.|+ .|+|++||||| +++||.|. +..
T Consensus 455 ~~~~~p~G~~~~~id~~ar~~l----~~~G~----------------~~~h~~GHgvG~~l~vHE~P~~i~~-------- 506 (623)
T 3ctz_A 455 SAAVFPTGTKGHLLDSFARSAL----WDSGL----------------DYLHGTGHGVGSFLNVHEGPCGISY-------- 506 (623)
T ss_dssp HTCCEETTCBGGGGGGGGTHHH----HHTTC----------------CCSSCSEEBCCSSSCSSCCSCEECT--------
T ss_pred HHHhCcCCCcHHHHHHHHHHHH----HHhCC----------------CCCCCccccCCCCCCCCCCCccCCC--------
Confidence 999999 999999999999886 45665 47899999999 99999663 210
Q ss_pred CCcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCC------------
Q 011203 390 GLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTAN------------ 457 (491)
Q Consensus 390 ~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~------------ 457 (491)
...++.+|+||||||+|||+|+ +|.+||||||+|+||++
T Consensus 507 ---~~~~~~~L~~GMv~tiEPGiy~--------------------------~g~~GiRiEd~vlVt~~~~~~~~~~~~~l 557 (623)
T 3ctz_A 507 ---KTFSDEPLEAGMIVTDEPGYYE--------------------------DGAFGIRIENVVLVVPVKTKYNFNNRGSL 557 (623)
T ss_dssp ---TCSCSCBCCTTCEEEECCEEEE--------------------------TTTEEEECBEEEEEEEECCSSCCSSSCEE
T ss_pred ---CCCCCCccCCCeEEEEeCcEEE--------------------------CCceEEEEeeEEEEecCCccccccccccc
Confidence 0124678999999999999997 56789999999999998
Q ss_pred CeeeCCCCCCCHHHHHHHHh
Q 011203 458 GSKNMTSVPREISDIEAIMA 477 (491)
Q Consensus 458 G~e~LT~~p~~~~~ie~~~~ 477 (491)
|+|+||.+|++...|+..|.
T Consensus 558 g~e~LT~~P~~~~~i~~~ll 577 (623)
T 3ctz_A 558 TLEPLTLVPIQTKMIDVDSL 577 (623)
T ss_dssp EEEECCCCCCCGGGSCGGGS
T ss_pred CCceeeeCCccHHHHHHHhC
Confidence 89999999999888876553
No 19
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=1.9e-51 Score=404.42 Aligned_cols=257 Identities=19% Similarity=0.176 Sum_probs=213.4
Q ss_pred cchHHHHHHhH--hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCcceEEe
Q 011203 171 NTLHPILSECR--VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICA 243 (491)
Q Consensus 171 ~~~~~~i~~lR--~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-----~~~~~iv~ 243 (491)
.++.+++.++| +|||++||+.||+|+++++++++.+++.++||+||.||++.+...+.++ |+.. .+|+++++
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~f~~iv~ 98 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREA-GAVPSFLGYHGFPASIC 98 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCSSEE
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCCceE
Confidence 34556688899 9999999999999999999999999999999999999999999988876 5542 36889999
Q ss_pred eCCCCcccccCCCCCCC-CCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 011203 244 TGENSAVLHYGHAAAPN-DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVC 322 (491)
Q Consensus 244 sG~~~~~~h~~~~~~p~-~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~ 322 (491)
+|.|++.+||.+ + +++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++
T Consensus 99 ~g~n~~~~H~~p----~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 173 (286)
T 3tav_A 99 SSVNDQVVHGIP----SATAVLADGDLVSIDCGAILDGWHGDSAWTFAV-GTVIPSDEALSEATRLSMEAGIAAMIPGNR 173 (286)
T ss_dssp EEETTBCSCCCC----CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred EecCccccCCCC----CCCcccCCCCEEEEEEEEEECCEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999654 7 8999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCcc
Q 011203 323 WVDMHKLAEKIILESLKKG--GVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVREL 400 (491)
Q Consensus 323 ~~ev~~~~~~~~~~~l~~~--G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L 400 (491)
++||++++++++.+.|++. || ..+.|.+|||||+++||.|.++ .+....++.+|
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~g~---------------~~~~~~~GHgiG~~~hE~P~i~---------~~~~~~~~~~L 229 (286)
T 3tav_A 174 LTDVSHAIELGTRAAEKQFDRAF---------------GIVDGYGGHGIGRSMHLDPFLP---------NEGAPGKGPLL 229 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCC---------------EECTTCCEEECSSSSSEEEEEC---------SSCCSSCSSBC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC---------------cccCCcccCcccccccCCcccc---------CcCCCCCCCCc
Confidence 9999999999996666666 65 2356889999999999966432 11123457899
Q ss_pred CCCCEEEECCccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCC
Q 011203 401 QERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVP 466 (491)
Q Consensus 401 ~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p 466 (491)
+|||||+||||+|+.......+ .|.| .+. .-+|.+|+|+||||+||++|+|+||..|
T Consensus 230 ~~GmV~tiEPgiy~~~~~~~~~-~~~w-------~~~-t~dg~~gvriEd~v~Vt~~G~e~LT~~p 286 (286)
T 3tav_A 230 AVGSVLAIEPMLTLGTTQTRVL-ADDW-------TVV-TTDGSRAAHWEHTVAVTEAGPRILTMRP 286 (286)
T ss_dssp CTTBEEEECCEEESSCSCEEEC-TTSS-------CEE-ETTCCCEEECBEEEECCTTSCEESSCCC
T ss_pred CCCCEEEEcCEEEcCCCceEec-CCCc-------eEE-ecCCCcEEEeeeEEEECCCcceeCCCCC
Confidence 9999999999999743211101 1111 110 0135679999999999999999999876
No 20
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=3.2e-51 Score=411.37 Aligned_cols=261 Identities=16% Similarity=0.137 Sum_probs=216.1
Q ss_pred HhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-----CCCCcceEEeeCCCCccccc
Q 011203 179 ECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC-----RHCSYTCICATGENSAVLHY 253 (491)
Q Consensus 179 ~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~-----~~~~~~~iv~sG~~~~~~h~ 253 (491)
..|.|||++||++||+|++|++++++.+++.++||+||.||++.+...++++ |+ .+.+|++++++|.|++.+|+
T Consensus 59 ~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~-g~~~~~~~~~~fp~iv~~g~n~~~~H~ 137 (337)
T 4fuk_A 59 LHDDSKKTAEIQRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVER-NMYPSPLNYYGFPKSVCTSVNEVICHG 137 (337)
T ss_dssp TTCTTC--CHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCSSSEEEETTEEECC
T ss_pred hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCccCCCCCCcCceeeccccccccCC
Confidence 4589999999999999999999999999999999999999999999888876 43 34678999999999999995
Q ss_pred CCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011203 254 GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKI 333 (491)
Q Consensus 254 ~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~ 333 (491)
. |++++|++||+|++|+|+.|+||++|+||||++ |+++++++++|+.++++++++++++|||++++||+.+++++
T Consensus 138 ~----~~~~~l~~GD~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~~~~~ 212 (337)
T 4fuk_A 138 I----PDSRELEEGDILNIDVSSYLNGFHGDLNETVFI-GRPDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDAIEAC 212 (337)
T ss_dssp C----CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEES-SSCCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHHHHHH
T ss_pred C----CCCccccCCCEEEEecceeECCEEEeeeeeEEe-CCccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence 4 599999999999999999999999999999999 99999999999999999999999999999999999999988
Q ss_pred HHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 334 ILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 334 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
+. +.|+ ..+.|.+|||||+++||.|..+ .+.......+|+||||||||||+|
T Consensus 213 ~~----~~g~---------------~~~~~~~GHGIG~~~he~p~~~---------~~~~~~~~~~L~~GMV~TIEPgiy 264 (337)
T 4fuk_A 213 AS----QYQC---------------SVVRTYTGHGVGHLFHTSPTVC---------HYANNKSLGMMRPGHVFTIEPMIN 264 (337)
T ss_dssp HH----TTTC---------------EECSSEEEEECSSSSSEEEEEC---------CSCC---CCBCCTTCEEEECCEEE
T ss_pred HH----HhcC---------------CcccCcccCCCCCccccCCccc---------ccccCCCCCEeCCCCEEEECCeeE
Confidence 64 4454 3677999999999999965433 122334567899999999999999
Q ss_pred cccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC----CCCCHHHHHHHHhCCCCC
Q 011203 414 FIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS----VPREISDIEAIMAGAPWP 482 (491)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~----~p~~~~~ie~~~~~~~~~ 482 (491)
+.......|.++ | .+. ..+|.+|+||||||+||++|+|+||. +|+..++||++.-..|.-
T Consensus 265 ~~~~~~~~~~D~-w-------t~~-t~dg~~gvriEd~VlVTe~G~EvLT~~p~~~P~~~~eie~~g~~~p~~ 328 (337)
T 4fuk_A 265 LGTWQDVTWPDK-W-------TST-TKDGRRSAQFEHTMVVTNGGVEIFTDWVDGVPTYQKQLKEWGIMLPQR 328 (337)
T ss_dssp SSCSCEEECTTS-S-------CEE-ETTCCCEEECBEEEEECSSSEEESSCCSSSCCHHHHHHHHHTCCCCCC
T ss_pred cCCCcceEcCCC-C-------eEE-ecCCceEEEeccEEEEcCCcCEECCCCCCCCCCCHHHHHhhCCCCCcc
Confidence 864332223222 1 111 12466799999999999999999996 667789999986554443
No 21
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=1.4e-50 Score=393.71 Aligned_cols=249 Identities=17% Similarity=0.159 Sum_probs=208.8
Q ss_pred HhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCcceEEeeCCCCccccc
Q 011203 179 ECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICATGENSAVLHY 253 (491)
Q Consensus 179 ~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-----~~~~~iv~sG~~~~~~h~ 253 (491)
++++|||++||++||+|+++++++++.+++.++||+||.||++.+...+.++ |+.. .+|++++++|.|++.+|+
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~-G~~~~~~~~~~f~~iv~~g~n~~~~H~ 82 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSH-NAIPAPLNYKGFPKSICTSINHVVCHG 82 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCSSSEEEETTEEECC
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCcceEecccccccCC
Confidence 5789999999999999999999999999999999999999999999988876 5432 358889999999999996
Q ss_pred CCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011203 254 GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKI 333 (491)
Q Consensus 254 ~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~ 333 (491)
. |++++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||+++++++
T Consensus 83 ~----p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~ 157 (262)
T 3mx6_A 83 I----PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYV-GDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSY 157 (262)
T ss_dssp C----CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHH
T ss_pred C----CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 5 489999999999999999999999999999999 99999999999999999999999999999999999999998
Q ss_pred HHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 334 ILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 334 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
++ +.|| ..+.|.+||+||+++||.|.++ .+....++.+|+|||||+||||+|
T Consensus 158 ~~----~~G~---------------~~~~~~~GHgiG~~~hE~p~i~---------~~~~~~~~~~L~~Gmv~tiEPgiy 209 (262)
T 3mx6_A 158 AE----KHNY---------------SVVRDYTGHGIGRVFHDKPSIL---------NYGRNGTGLTLKEGMFFTVEPMIN 209 (262)
T ss_dssp HH----HTTC---------------EECCSCCEEECSSSSSEEEEEC---------SSCCTTCSCBCCTTCEEEECCEEE
T ss_pred HH----HcCC---------------ccCCCccccccCCcccCCCccc---------ccCCCCCCCEeCCCCEEEEeCEEE
Confidence 74 4665 2357999999999999966332 121234678999999999999999
Q ss_pred ccccccccc-ccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 414 FIDALLVPA-MENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 414 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
....- .+. ..| +|.+...+.+ .|+|+||||+||++|+|+||..|+++.
T Consensus 210 ~g~~g-vri~~~d-------~w~~~~~~~~-~~~~~Ed~v~Vt~~G~e~LT~~p~~l~ 258 (262)
T 3mx6_A 210 AGNYD-TILSKLD-------GWTVTTRDKS-LSAQFEHTIGVTKDGFEIFTLSPKKLD 258 (262)
T ss_dssp SSCSC-EEECTTT-------SCCEEETTCC-CEEECBEEEEECSSSEEESCCCTTCCC
T ss_pred cCCCe-EEEecCC-------CceEEecCCC-ceeeeceEEEECCCcCeECCCCCcccC
Confidence 63210 000 111 3444444444 499999999999999999999999874
No 22
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=4.1e-50 Score=402.78 Aligned_cols=251 Identities=17% Similarity=0.159 Sum_probs=210.9
Q ss_pred HhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCccccc
Q 011203 179 ECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHY 253 (491)
Q Consensus 179 ~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~ 253 (491)
..|.|||++||++||+|+++++++++.+++.++||+||.||++.+...+.++ |+. +.+|++++++|.|++++|+
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~-Ga~ps~l~y~~Fp~iv~sg~N~~i~H~ 177 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKN-NAYPSTLNYYKFPKSCCTSVNEIVCHG 177 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCSSEEEEETTEEECC
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCccccccccCCCCeEEEcCccccccC
Confidence 4689999999999999999999999999999999999999999999998876 543 2468899999999999995
Q ss_pred CCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 011203 254 GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNG---KFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLA 330 (491)
Q Consensus 254 ~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G---~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~ 330 (491)
. |++++|++||+|++|+|+.|+||++|+||||++ | +++++|+++|++++++++++++++|||++++||++++
T Consensus 178 ~----p~~r~L~~GDiV~iD~G~~~~GY~sDitRT~~v-Gg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa 252 (368)
T 3s6b_A 178 I----PDYRPLKSGDIINIDISVFYKGVHSDLNETYFV-GDINDVPKEGKELVETCYFSLMEAIKKCKPGMFYKNIGTLI 252 (368)
T ss_dssp C----CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHH
T ss_pred C----CCCccccCCCEEEEEEeEEECcEEEEEEEEEEE-CCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence 4 589999999999999999999999999999999 6 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECC
Q 011203 331 EKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEP 410 (491)
Q Consensus 331 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iep 410 (491)
+++++ +.|+ ..+.|++|||||+++||.|.++ .+.....+.+|++||||||||
T Consensus 253 ~~~i~----~~G~---------------~~~~~~~GHGIG~~vHE~P~i~---------~~~~~~~~~~L~~GMVfTIEP 304 (368)
T 3s6b_A 253 DAYVS----KKNF---------------SVVRSYSGHGVGKLFHSNPTVP---------HFKKNKAVGIMKPGHVFTIEP 304 (368)
T ss_dssp HHHHH----TTTC---------------EECCSCCEEECSSSSSEEEEEC---------SSSSCCCCCBCCTTCEEEECC
T ss_pred HHHHH----HcCC---------------CcccceeeCCCCccccCCCccc---------cccCCCCCCEECCCCEEEEcC
Confidence 99874 5666 2367999999999999966432 111123457899999999999
Q ss_pred ccccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCHHHH
Q 011203 411 GCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDI 472 (491)
Q Consensus 411 g~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~~~i 472 (491)
|+|+.......|..+ |... ..+|.+|+||||||+||++|+|+|| ..|+++..+
T Consensus 305 giy~~~~~~~~~~d~--------wt~~-t~dG~~gvriEdtVlVTe~G~EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 305 MINQGHYSDVLWPDQ--------WTSA-TSDGKLSAQFEHTLLITNNGVEILTKRTQDSPPLG 358 (368)
T ss_dssp EEESSCSCEEECTTS--------SCEE-ETTCCCEEECBEEEEEETTEEEETTCCCTTCCCCS
T ss_pred eEEcCcccccccCCC--------ceeE-eeCCccEEEEeEEEEEcCCcCeECCCCCCCCcCce
Confidence 999854322222221 2111 1257789999999999999999999 677776543
No 23
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=8.5e-50 Score=392.28 Aligned_cols=243 Identities=19% Similarity=0.203 Sum_probs=205.6
Q ss_pred HhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCcceEEeeCCCCccccc
Q 011203 179 ECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICATGENSAVLHY 253 (491)
Q Consensus 179 ~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-----~~~~~iv~sG~~~~~~h~ 253 (491)
++|+|||++||+.||+|+++++++++.+++.++||+||.||++.+...+.++ |+.. .+|++++++|.|++.+|+
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~-G~~~~~~~~~~f~~iv~~g~n~~~~H~ 115 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDN-GAYPSTLGYKGFPKSCCTSLNEVICHG 115 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCSSSEEEETTEEECC
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc-CCccccccccCCCCceEecccceeecC
Confidence 6899999999999999999999999999999999999999999999988876 5431 358889999999999996
Q ss_pred CCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011203 254 GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKI 333 (491)
Q Consensus 254 ~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~ 333 (491)
. |++++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||+++++++
T Consensus 116 ~----p~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~ 190 (285)
T 3pka_A 116 I----PDSTVITDGDIVNIDVTAYIGGVHGDTNATFPA-GDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESY 190 (285)
T ss_dssp C----CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHH
T ss_pred C----CCCcccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 5 489999999999999999999999999999999 99999999999999999999999999999999999999988
Q ss_pred HHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 334 ILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 334 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
+ ++.|| ..+.|++||+||+++||.|.++ .+....++.+|++||||+||||+|
T Consensus 191 ~----~~~G~---------------~~~~~~~GHgiG~~~hE~P~i~---------~~~~~~~~~~L~~Gmv~tiEPgiy 242 (285)
T 3pka_A 191 A----NRFGY---------------NVVRDFTGHGIGTTFHNGLVVL---------HYDQPAVETIMQPGMTFTIEPMIN 242 (285)
T ss_dssp H----HTTTC---------------EECCSSCEEBCSSSSSCSCEEC---------SSCCTTCCCBCCTTBEEEECCEEE
T ss_pred H----HHcCC---------------ccCCCcccccCCCcccCCCccc---------CccCCCCCCccCCCCEEEEcCEEE
Confidence 6 45676 2358999999999999966432 111234578999999999999999
Q ss_pred cccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 414 FIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
+.......|. ++ |..... +|.+|+||||||+||++|+|+||.
T Consensus 243 ~~~~~~~~~~-~g-------w~~~~~-~g~~gvriEdtv~Vt~~G~e~LT~ 284 (285)
T 3pka_A 243 LGALDYEIWD-DG-------WTVVTK-DRKWTAQFEHTLLVTDTGVEILTC 284 (285)
T ss_dssp SSCSCEEECT-TS-------CCEEET-TCCCEEECBEEEEECSSSEEESSC
T ss_pred cCCCceeecC-CC-------ceEEec-CCCcEEEEeeEEEECCCcCeECCC
Confidence 7532222221 11 221111 456799999999999999999995
No 24
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=2.1e-49 Score=385.89 Aligned_cols=248 Identities=18% Similarity=0.191 Sum_probs=207.5
Q ss_pred hHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHH-HHHcCCCC-----CCCcceEEeeCCCCccccc
Q 011203 180 CRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHH-TYMYGGCR-----HCSYTCICATGENSAVLHY 253 (491)
Q Consensus 180 lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~-~~~~~g~~-----~~~~~~iv~sG~~~~~~h~ 253 (491)
+|+|||++||+.||+|+++++++++.+++.++||+||.||++.+... +.++ |+. +.+|++++++|.|+.++|+
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~-g~~~~~~~~~~f~~iv~~g~n~~~~H~ 79 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQ-HAVSACLGYHGYPKSVCISINEVVCHG 79 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTS-CCEESSTTGGGCCSSSEEEETTEEECC
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHh-CCccccccccCCCcceEecccccccCC
Confidence 58999999999999999999999999999999999999999999988 6554 553 2468899999999999996
Q ss_pred CCCCCCCC-CccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 011203 254 GHAAAPND-RTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEK 332 (491)
Q Consensus 254 ~~~~~p~~-~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~ 332 (491)
. |++ ++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||++++++
T Consensus 80 ~----p~~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~ 154 (263)
T 2gg2_A 80 I----PDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIV-GKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQK 154 (263)
T ss_dssp C----CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHH
T ss_pred C----CCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 5 477 999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcc
Q 011203 333 IILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGC 412 (491)
Q Consensus 333 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~ 412 (491)
+++ +.|+ ..+.|.+||+||+++||.|.++ .+....++.+|++|||||||||+
T Consensus 155 ~~~----~~G~---------------~~~~~~~GHgiG~~~he~p~i~---------~~~~~~~~~~l~~Gmv~tiEPgi 206 (263)
T 2gg2_A 155 FVE----AEGF---------------SVVREYCGHGIGRGFHEEPQVL---------HYDSRETNVVLKPGMTFTIEPMV 206 (263)
T ss_dssp HHH----HTTC---------------EECSSCCEEECSSSSSEEEEEC---------SSCCTTCCCBCCTTCEEEECCEE
T ss_pred HHH----HcCC---------------EECCCcccccCCcceecCCccc---------CccCCCCCCCcCCCCEEEEecEE
Confidence 874 4665 2367889999999999966332 11123457899999999999999
Q ss_pred ccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHH
Q 011203 413 YFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 470 (491)
Q Consensus 413 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~ 470 (491)
|+...... ...+ +|.+... .+.+|+|+||||+||++|+|+||..|+++.
T Consensus 207 ~~~~~~~~-~~~~-------~~~~~~~-~g~~g~riEdtvlVt~~G~e~LT~~p~~l~ 255 (263)
T 2gg2_A 207 NAGKKEIR-TMKD-------GWTVKTK-DRSLSAQYEHTIVVTDNGCEILTLRKDDTI 255 (263)
T ss_dssp ESSCSCEE-ECTT-------SSCEEET-TCCCEEECBEEEEEETTEEEESSCCTTCCS
T ss_pred EcCCCceE-EcCC-------CceEEec-CCCeEEEEEEEEEECCCccEEeCCCCcccC
Confidence 97431110 0001 2333222 244699999999999999999999998753
No 25
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=5e-49 Score=382.62 Aligned_cols=244 Identities=21% Similarity=0.261 Sum_probs=204.5
Q ss_pred HHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCcceEEeeCCCCcccc
Q 011203 178 SECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICATGENSAVLH 252 (491)
Q Consensus 178 ~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-----~~~~~iv~sG~~~~~~h 252 (491)
..+|+|||++||+.||+|+++++++++.+++.++||+||.||++.+...+.++ |+.. .+|++++++|.|++++|
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~f~~~v~~g~n~~~~H 89 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKL-RVKPAFKGYGGYKYATCVSVNEEVVH 89 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHH-TCEESSTTGGGCCCSEEEEETTBCSC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHc-CCccccccccCCCcceEecccccccC
Confidence 46899999999999999999999999999999999999999999999998877 5431 46788999999999999
Q ss_pred cCCCCCCCCCc-cCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011203 253 YGHAAAPNDRT-FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 331 (491)
Q Consensus 253 ~~~~~~p~~~~-l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~ 331 (491)
|. |++++ |++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||+++++
T Consensus 90 ~~----p~~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~ 164 (262)
T 1o0x_A 90 GL----PLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIV-GETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQ 164 (262)
T ss_dssp CC----CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHH
T ss_pred CC----CCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 65 48899 9999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCc
Q 011203 332 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPG 411 (491)
Q Consensus 332 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg 411 (491)
++++ +.|+ ..++|.+||+||+++||.|.++ .+....++.+|+|||||+||||
T Consensus 165 ~~~~----~~G~---------------~~~~~~~GHgiG~~~he~p~i~---------~~~~~~~~~~L~~Gmv~tiEPg 216 (262)
T 1o0x_A 165 ETVE----SVGF---------------NVIRDYVGHGVGRELHEDPQIP---------NYGTPGTGVVLRKGMTLAIEPM 216 (262)
T ss_dssp HHHH----HTTC---------------EECCSSCEEECSSSSSEEEEEC---------SCCCTTCSCBCCTTCEEEECCE
T ss_pred HHHH----HcCC---------------cccCCcccCcccccccCCCccC---------CCCCCCCCCccCCCCEEEECCE
Confidence 9874 4665 2467999999999999966332 1112345789999999999999
Q ss_pred cccccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203 412 CYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 464 (491)
Q Consensus 412 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~ 464 (491)
+|.....+.. ..+ +|.+... ++.+|+|+||||+||++|+|+||.
T Consensus 217 i~~g~~~v~~-~~~-------~w~~~~~-~g~~gvriEdtvlVt~~G~e~LT~ 260 (262)
T 1o0x_A 217 VSEGDWRVVV-KED-------GWTAVTV-DGSRCAHFEHTILITENGAEILTK 260 (262)
T ss_dssp EESSCCCEEE-CTT-------SSCEEET-TCCCEEECBEEEEECSSSEEESSC
T ss_pred EEcCCCceee-cCC-------CceEEee-CCCcEEEEEEEEEECCCccEeCCC
Confidence 9974321110 011 1222221 355799999999999999999995
No 26
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=6.1e-49 Score=391.79 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=208.0
Q ss_pred HhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCccccc
Q 011203 179 ECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHY 253 (491)
Q Consensus 179 ~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~ 253 (491)
.+|.|||++||+.||+|++++.++++.+++.++||+||.||++.+...+.++ |+. +.+|++++++|.|++++|+
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i~pGvte~el~~~~~~~~~~~-G~~~~~~~y~~fp~iv~sg~n~~~~H~ 149 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIAR-NCYPSPLNYYNFPKSCCTSVNEVICHG 149 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHT-TCEETTTTGGGCCSSSEEEETTEEECC
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHc-CCccccccccCCCCeEEecCCCCcCCC
Confidence 4689999999999999999999999999999999999999999999998876 543 2368899999999999995
Q ss_pred CCCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011203 254 GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKI 333 (491)
Q Consensus 254 ~~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~ 333 (491)
. |++++|++||+|++|+|+.|+||++|+||||++ |+++++|+++|++++++++++++++|||++++||+++++++
T Consensus 150 ~----p~~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~v-G~~~~~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~ 224 (329)
T 2b3h_A 150 I----PDRRPLQEGDIVNVDITLYRNGYHGDLNETFFV-GEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKH 224 (329)
T ss_dssp C----CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHH
T ss_pred C----CCCcCCCCCCEEEEEeeEEECCEEEeeEEEEEe-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Confidence 4 589999999999999999999999999999999 89999999999999999999999999999999999999988
Q ss_pred HHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 334 ILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 334 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
+. +.|+ ..+.|.+|||||+++||.|.++ .+...+.+.+|++|||||||||+|
T Consensus 225 ~~----~~G~---------------~~~~~~~GHGIG~~~HE~P~i~---------~~~~~~~~~~L~~GMVftIEPgiy 276 (329)
T 2b3h_A 225 AQ----ANGF---------------SVVRSYCGHGIHKLFHTAPNVP---------HYAKNKAVGVMKSGHVFTIEPMIC 276 (329)
T ss_dssp HH----HTTC---------------EECCSCCEEECSSSSSEEEEEC---------CSSSCCCCCBCCTTCEEEECCEEE
T ss_pred HH----HcCC---------------CccCCcccCCcCcccccCCccc---------ccccCCCCCEECCCCEEEEeCCcC
Confidence 74 5676 2367889999999999966432 111112247899999999999999
Q ss_pred cccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CC-CCCH
Q 011203 414 FIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SV-PREI 469 (491)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~-p~~~ 469 (491)
+....+..|.. +|.... .+|.+|+||||||+||++|+|+|| .. |+..
T Consensus 277 ~~~~~~~~~~d--------~w~~~~-~~G~~g~riEdtvlVTe~G~evLT~~~~~k~~ 325 (329)
T 2b3h_A 277 EGGWQDETWPD--------GWTAVT-RDGKRSAQFEHTLLVTDTGCEILTRRLDSARP 325 (329)
T ss_dssp SSCCCEEECTT--------SCCEEE-TTCCCEEECBEEEEECSSSEEETTCCSSCSSC
T ss_pred cCcccccccCC--------CceeEe-eCCeEEEEEeeEEEEcCCeeEECCCCCCCCCC
Confidence 75432222221 222221 257789999999999999999999 44 6653
No 27
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=2.4e-48 Score=376.11 Aligned_cols=242 Identities=20% Similarity=0.246 Sum_probs=201.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-----CcceEEeeCCCCcccccCCCC
Q 011203 183 FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-----SYTCICATGENSAVLHYGHAA 257 (491)
Q Consensus 183 vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~-----~~~~iv~sG~~~~~~h~~~~~ 257 (491)
|||++||+.||+|+++++++++.+.+.++||+||.||++.+.+.+.++ |+... +|++++++|.|++++|+.
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~-g~~~~~~~~~~f~~~v~~g~n~~~~H~~--- 78 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEY-GAISAPIHDENFPGQTCISVNEEVAHGI--- 78 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHH-TCEEHHHHHHCCSSSSEEEETTEEECCC---
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCcceEEcCCccccCCC---
Confidence 899999999999999999999999999999999999999999998876 54322 678788888999999965
Q ss_pred CCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCH-HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 258 APNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTS-DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 258 ~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~-~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
|++++|++||+|++|+|+.|+||++|+||||++ |++++ +|+++|++++++++++++++|||++++||+++++++++
T Consensus 79 -p~~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~v-G~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~- 155 (252)
T 1qxy_A 79 -PSKRVIREGDLVNIDVSALKNGYYADTGISFVV-GESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTAR- 155 (252)
T ss_dssp -CCSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHH-
T ss_pred -CCCcCcCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-
Confidence 489999999999999999999999999999999 99999 99999999999999999999999999999999999874
Q ss_pred HHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCC-CCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccc
Q 011203 337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPG-GYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 415 (491)
Q Consensus 337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~-~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~ 415 (491)
+.|+ ..+.|.+||+||+++||.| .++ .+....++.+|++||||+||||+|..
T Consensus 156 ---~~g~---------------~~~~~~~GHgiG~~~he~p~~i~---------~~~~~~~~~~l~~Gmv~tiEPgi~~g 208 (252)
T 1qxy_A 156 ---QNDL---------------KVIKNLTGHGVGLSLHEAPAHVL---------NYFDPKDKTLLTEGMVLAIEPFISSN 208 (252)
T ss_dssp ---HTTC---------------EECTTCCEEECSSSSSEEEEEEC---------SSCCTTCCCBCCTTBEEEECCEEESS
T ss_pred ---HcCC---------------EecCCccccccCcccccCCcccc---------CCCCCCCCCCccCCCEEEEecEEEcC
Confidence 4565 2367889999999999966 332 11122357899999999999999974
Q ss_pred cccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCC
Q 011203 416 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPRE 468 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~ 468 (491)
...+..+ .+ +|.+... ++.+|+|+||||+||++| |+||..|++
T Consensus 209 ~~~~~~~-~~-------~~~~~~~-~g~~g~riEdtvlVt~~G-e~Lt~~p~~ 251 (252)
T 1qxy_A 209 ASFVTEG-KN-------EWAFETS-DKSFVAQIEHTVIVTKDG-PILTTKIEE 251 (252)
T ss_dssp CSSCEEC-SS-------SSCEECT-TCCCEEEEEEEEECCTTC-CEETTCC--
T ss_pred CCceEec-CC-------CceEEec-CCCcEEEEEEEEEECCCc-eEccCCCCC
Confidence 3221111 11 1222221 345799999999999999 999999875
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=4.7e-42 Score=351.01 Aligned_cols=276 Identities=15% Similarity=0.146 Sum_probs=210.3
Q ss_pred HHHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC---------CCCCCcceEEeeCCC
Q 011203 177 LSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGG---------CRHCSYTCICATGEN 247 (491)
Q Consensus 177 i~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g---------~~~~~~~~iv~sG~~ 247 (491)
+..+|.|||++||+.||+|++++.++++.+.+.++||+||.||++.+...+.++++ ..+.+|+++ .| .|
T Consensus 13 v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~-vS-~N 90 (401)
T 2q8k_A 13 EQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS-IS-VN 90 (401)
T ss_dssp -CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE-EE-ET
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE-Ee-CC
Confidence 56789999999999999999999999999999999999999999998888876522 123455544 44 89
Q ss_pred CcccccCCCCCCC--CCccCCCCeEEEEeceEeCceEeeeeeEEeeCC-----CCCHHHHHHHHHHHHHHHHHHHHhCCC
Q 011203 248 SAVLHYGHAAAPN--DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNG-----KFTSDQSLIYNAVLKAHNAVINAMKPG 320 (491)
Q Consensus 248 ~~~~h~~~~~~p~--~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G-----~~~~~~~~~~~~~~~a~~~~~~~lkpG 320 (491)
..++||.+ .|+ +++|++||+|+||+|+.|+||++|++|||+| | +++++++++|++++++++++++++|||
T Consensus 91 ~~v~H~~P--~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~v-G~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG 167 (401)
T 2q8k_A 91 NCVCHFSP--LKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVV-DVAQGTQVTGRKADVIKAAHLCAEAALRLVKPG 167 (401)
T ss_dssp TEEECCCC--CTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEET-TCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTT
T ss_pred cccccCCC--CCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEE-CCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999653 124 3899999999999999999999999999999 6 899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCC-CCCCCCCCCCCCCcCcCCCCc
Q 011203 321 VCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGG-YPKGTERSKEPGLKSLRTVRE 399 (491)
Q Consensus 321 ~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~-~~~~~~~~~~~~~~~~~~~~~ 399 (491)
++++||+.+++++++ +.||. .+.+.+|||||+++||.|. ++... .. .......+.+
T Consensus 168 ~~~~dI~~ai~~~~~----~~G~~---------------~v~~~~GHGIG~~~HE~P~~i~~~~---~~-~~~~~~~~~~ 224 (401)
T 2q8k_A 168 NQNTQVTEAWNKVAH----SFNCT---------------PIEGMLSHQLKQHVIDGEKTIIQNP---TD-QQKKDHEKAE 224 (401)
T ss_dssp CBHHHHHHHHHHHHH----TTTCE---------------ECTTCEEEEEBTTBSSCSCEEESSC---CH-HHHHHSCCCB
T ss_pred CcHHHHHHHHHHHHH----HcCCe---------------ecCCcccccCCCccccCCcccccCC---Cc-ccccCCCCCE
Confidence 999999999999874 56662 2346689999999999763 11100 00 0000124679
Q ss_pred cCCCCEEEECCccccccccccccccccccc------------------------------------------------cc
Q 011203 400 LQERMVITVEPGCYFIDALLVPAMENESTS------------------------------------------------KF 431 (491)
Q Consensus 400 L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~------------------------------------------------~~ 431 (491)
|++||||+|||+++........+. +.|.. .+
T Consensus 225 L~~GmV~tIEP~i~~G~g~v~~~~-~~~t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~ 303 (401)
T 2q8k_A 225 FEVHEVYAVDVLVSSGEGKAKDAG-QRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVEC 303 (401)
T ss_dssp CCTTCEEEEEEEEESSCCCCEECS-CCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHH
T ss_pred eCCCCEEEEeCceEecCCEEEECC-CCceEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHH
Confidence 999999999999986433222111 11111 00
Q ss_pred cc------cchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCH-----------HHHHHHHhCCCC
Q 011203 432 FN------HEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREI-----------SDIEAIMAGAPW 481 (491)
Q Consensus 432 ~~------~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~-----------~~ie~~~~~~~~ 481 (491)
+| |.++-.-+|-..+++|+||+||++|+++||..|.+. ++|.++++.+-.
T Consensus 304 ~~~~~l~~~~vl~t~dg~~~Aq~EhTvlvt~~G~eilT~~~~~~~~~~s~~~~~d~e~~~~l~~~~~ 370 (401)
T 2q8k_A 304 AKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSAS 370 (401)
T ss_dssp HHTTSEEEECCEECCTTCCEEEEEEEEEEETTEEEECCCCCCCGGGBCCSCCCCCHHHHHHHHSCC-
T ss_pred HHcCCccCCCceEeeCCCEEEEEEEEEEECCCCcEEecCCCCCHhhccCCCccCcHHHHHHHhcccc
Confidence 11 222222335457999999999999999999888766 799999987643
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=5.2e-40 Score=323.49 Aligned_cols=192 Identities=20% Similarity=0.233 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCC
Q 011203 187 HELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFED 266 (491)
Q Consensus 187 ~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~ 266 (491)
+||+.||+|++++.++++.+++.++||+||.||++.+.+.+.++ |+. ++|+++++ .|...+|+.+ ...++++|++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~-G~~-~~fp~~vs--~n~~~~H~~p-~~~~~~~L~~ 75 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMEL-GGK-PAFPVNLS--INEIAAHYTP-YKGDTTVLKE 75 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCE-ESSCCEEE--ETTEEECCCC-CTTCCCBCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHc-CCC-CCCCcEEe--eCCccccccC-CCCCCccccC
Confidence 48999999999999999999999999999999999999998876 554 68888876 4777899654 1113789999
Q ss_pred CCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccC
Q 011203 267 GDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVG 346 (491)
Q Consensus 267 Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~ 346 (491)
||+|++|+|+.|+||++|++|||++ |+ +++++|++++++++++++++|||++++||+.+++++++ +.||
T Consensus 76 GDiv~iD~G~~~~GY~sD~tRT~~v-G~---~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~----~~G~--- 144 (295)
T 1xgs_A 76 GDYLKIDVGVHIDGFIADTAVTVRV-GM---EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIR----KRGF--- 144 (295)
T ss_dssp TCEEEEEEEEEETTEEEEEEEEEET-TS---CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHH----TTTC---
T ss_pred CCEEEEEEeEEECCEEEEEEEEEEe-CH---HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH----HCCC---
Confidence 9999999999999999999999999 76 78899999999999999999999999999999999874 5666
Q ss_pred ChHHHHHhhcccccCccccccccC-CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccc
Q 011203 347 NVDEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 415 (491)
Q Consensus 347 ~~~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~ 415 (491)
.++.|.+||||| +++||.|.++ .+.....+.+|+|||||||||++|..
T Consensus 145 ------------~~~~~~~GHgIG~l~~He~p~ip---------~~~~~~~~~~L~~GmV~tIEP~i~~G 193 (295)
T 1xgs_A 145 ------------KPIVNLSGHKIERYKLHAGISIP---------NIYRPHDNYVLKEGDVFAIEPFATIG 193 (295)
T ss_dssp ------------EECTTCCEEECBTTBSSCSCEEC---------SSCCTTCCCBCCTTCEEEECCEEESS
T ss_pred ------------eEECCCcCCCCCCcccCCCCcCC---------ccCCCCCCCEeCCCCEEEEcceeECC
Confidence 367899999998 7999965332 22122226899999999999999853
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=3.1e-38 Score=325.59 Aligned_cols=208 Identities=16% Similarity=0.142 Sum_probs=168.9
Q ss_pred HHhHhc--CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---cCCC-CCCCcceEEeeCCCCccc
Q 011203 178 SECRVF--KSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---YGGC-RHCSYTCICATGENSAVL 251 (491)
Q Consensus 178 ~~lR~v--Ks~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~---~~g~-~~~~~~~iv~sG~~~~~~ 251 (491)
.++|++ ||++||+.||+|++++.++++.+.+.++||+||.||++.+...+.+ +.|+ .+.+|+++++. |..++
T Consensus 153 eelR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~ivSv--N~~v~ 230 (478)
T 1b6a_A 153 EEKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSL--NNCAA 230 (478)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEE--TTEEE
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEEEC--CCccc
Confidence 345555 9999999999999999999999999999999999998888776653 2344 35678888753 88889
Q ss_pred ccCCCCCCC---CCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Q 011203 252 HYGHAAAPN---DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHK 328 (491)
Q Consensus 252 h~~~~~~p~---~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~ 328 (491)
|+. |+ +++|++||+|+||+|+.|+||++|++|||+| | ++++++|++++++++++++++|||++++||+.
T Consensus 231 Hg~----P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~V-g---~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ 302 (478)
T 1b6a_A 231 HYT----PNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTF-N---PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGE 302 (478)
T ss_dssp CCC----CCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECS-S---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred cCC----CCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 965 45 5899999999999999999999999999998 4 79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCccCChHHHHHhhcccccCcccccccc-CCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEE
Q 011203 329 LAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFL-GIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVIT 407 (491)
Q Consensus 329 ~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~i-Gl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~ 407 (491)
++++++. +.||.... ..+....+.|.+|||| |+++||.|.+| .+ ....+.+|++||||+
T Consensus 303 ai~~~i~----~~G~~l~g------~~~~~~~v~h~~GHGIGGl~iHE~P~vP---------~~-~~~~~~~Le~GMVft 362 (478)
T 1b6a_A 303 AIQEVME----SYEVEIDG------KTYQVKPIRNLNGHSIGQYRIHAGKTVP---------IV-KGGEATRMEEGEVYA 362 (478)
T ss_dssp HHHHHHH----TCEEEETT------EEEECEECTTCEEEEEBTTBSCCSCEEE---------SS-SSCCCCBCCTTCEEE
T ss_pred HHHHHHH----HcCCCccc------ccccceeecCcceeCCCCccccCCCccc---------ee-cCCCCCEeCCCCEEE
Confidence 9999874 56651000 0000125789999999 79999954322 22 134568999999999
Q ss_pred ECCccccc
Q 011203 408 VEPGCYFI 415 (491)
Q Consensus 408 iepg~y~~ 415 (491)
|||++|..
T Consensus 363 IEP~i~~G 370 (478)
T 1b6a_A 363 IETFGSTG 370 (478)
T ss_dssp EEEEEESS
T ss_pred EeCeeECC
Confidence 99999865
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=2.2e-36 Score=303.73 Aligned_cols=200 Identities=16% Similarity=0.119 Sum_probs=167.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC---CCCCcceEEeeCCCCcccccCCCCCCC
Q 011203 184 KSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC---RHCSYTCICATGENSAVLHYGHAAAPN 260 (491)
Q Consensus 184 Ks~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~---~~~~~~~iv~sG~~~~~~h~~~~~~p~ 260 (491)
.|++||+.||+|++|++++++.+++.++||+||.||++.++..+.+.++. .+.+|++++ |.|.+.+||.+ +
T Consensus 42 ~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~--s~N~~~~H~~P----~ 115 (360)
T 2nw5_A 42 TESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGM--SMNSCAAHYTV----N 115 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEE--EETTEEECCCC----C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCccCccccCcee--eccccccCCCC----C
Confidence 49999999999999999999999999999999999999999988876442 245787764 58999999765 4
Q ss_pred ----CCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 261 ----DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 261 ----~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
+++|++||+|++|+|+.|+||++|+||||++ + ++|+++|+++++|++++++++|||++++||+++++++++
T Consensus 116 ~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v-~---~~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~vi~- 190 (360)
T 2nw5_A 116 PGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAF-K---ENLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVIS- 190 (360)
T ss_dssp TTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-C---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHT-
T ss_pred cccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEc-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-
Confidence 6899999999999999999999999999998 3 789999999999999999999999999999999999874
Q ss_pred HHHhCCCccCChHHHHHhhcccccCccccccccCC-cccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGI-DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl-~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
+.||-... ..+....+.|.+|||||+ ++||.|.++ .+ ...++.+|++||||+|||++|
T Consensus 191 ---~~G~~~~g------~~~~~~~v~~~~GHgIG~y~iHe~P~I~---------~~-~~~~~~~Le~GmV~aIEP~i~ 249 (360)
T 2nw5_A 191 ---SYEVEIGG------RMWPIRPISDLHGHSISQFRIHGGISIP---------AV-NNRDTTRIKGDSFYAVETFAT 249 (360)
T ss_dssp ---TCEEECSS------SEEECEECTTCCEEEEBTTBSCCSCEEC---------SS-CCCCCCBCCSSEEEEEEEEEE
T ss_pred ---HcCCcccc------ccccccccCCeeEeeecCceeccCCEec---------cc-cCCCCcEEeCCcEEEEeceEE
Confidence 45541000 000113567999999999 999976443 11 124578999999999999998
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=100.00 E-value=9.8e-35 Score=292.83 Aligned_cols=212 Identities=15% Similarity=0.110 Sum_probs=158.9
Q ss_pred HHhHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC---CCCcceEEeeCCCCcccccC
Q 011203 178 SECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR---HCSYTCICATGENSAVLHYG 254 (491)
Q Consensus 178 ~~lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~---~~~~~~iv~sG~~~~~~h~~ 254 (491)
.++|.+|+++||+.||+|++|+.++++.+.+.++||+|+.||++.+++.+++.++.. +.+|+++++ .|..++|+.
T Consensus 34 ~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciS--vN~~v~Hg~ 111 (358)
T 3fm3_A 34 MEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--MNSCAAHYT 111 (358)
T ss_dssp CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--ETTEEECCC
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEe--eCCEEEecC
Confidence 578999999999999999999999999999999999999999999988887753221 346765443 688889976
Q ss_pred CCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 255 HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 255 ~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
+.+.+++++|++||+|.+|+|+.++||++|++||+.+ |+ ...++++++.+++++++++++||+++.+|..++++++
T Consensus 112 P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~v-g~---~~~~l~~~~~~al~aai~~~~pG~~~~dig~ai~~v~ 187 (358)
T 3fm3_A 112 VNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAF-KE---NLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVI 187 (358)
T ss_dssp CCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-CG---GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred CCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccc-cc---cchhHHHHHHHHHHHHHHhhhcCCccccccHHHHHHH
Confidence 5333468899999999999999999999999999998 54 3346778899999999999999999999999999987
Q ss_pred HHHHHhCCCccCChHHHHHhhcccccCccccccccCC-cccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccc
Q 011203 335 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGI-DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 413 (491)
Q Consensus 335 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl-~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y 413 (491)
. +.|+.... ..+......+-+||+||. .+||.|.+| .+ ....+.+|+|||||||||.+.
T Consensus 188 ~----~~~~~v~~------~~~~~~~v~~~~GHgiG~~~~he~~~ip---------~~-~~~~~~~le~GmV~tIEP~is 247 (358)
T 3fm3_A 188 S----SYEVEIGG------RMWPIRPISDLHGHSISQFRIHGGISIP---------AV-NNRDTTRIKGDSFYAVETFAT 247 (358)
T ss_dssp T----TCEEECSS------SEEECEECTTCCEEEEBTTBSCCSCEEC---------SS-CCCCCCBCCSSEEEEEEEEEE
T ss_pred h----hccceecc------ccccccccccccccccCCccccCCCccC---------cc-CCCCCcEEeeeeeEEeeeeee
Confidence 4 34431100 000001112234555553 345533222 22 123457899999999999765
Q ss_pred cc
Q 011203 414 FI 415 (491)
Q Consensus 414 ~~ 415 (491)
..
T Consensus 248 ~G 249 (358)
T 3fm3_A 248 TG 249 (358)
T ss_dssp SS
T ss_pred cC
Confidence 44
No 33
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.6e-13 Score=139.18 Aligned_cols=173 Identities=11% Similarity=0.046 Sum_probs=133.1
Q ss_pred hHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc---------cCCCcHHHHHHHHHHHHHHcCC--------CCCCCcceEE
Q 011203 180 CRVFKSDHELALIQFANDISSEAHVEVMKKT---------RVGMKEYQMESMFLHHTYMYGG--------CRHCSYTCIC 242 (491)
Q Consensus 180 lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i---------~~G~tE~ei~a~~~~~~~~~~g--------~~~~~~~~iv 242 (491)
=+-|-+++-+..+|.|++|+.++++.+...+ +||++-.||+......+.+..+ -.+.+||+.+
T Consensus 37 ekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~I 116 (614)
T 4b6a_t 37 DKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTTI 116 (614)
T ss_dssp CSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCcee
Confidence 3457788899999999999999999998876 5667888898776666554311 1246887666
Q ss_pred eeCCCCcccccCCCCCCCC--------------------CccCCCCeEEEEeceEeCceEeeeeeEEeeCC---------
Q 011203 243 ATGENSAVLHYGHAAAPND--------------------RTFEDGDMALLDMGAEYQFYGSDITCSFPVNG--------- 293 (491)
Q Consensus 243 ~sG~~~~~~h~~~~~~p~~--------------------~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G--------- 293 (491)
+ .|....||.+ .++| ..|++||+|.||+|+..+||.+|+++|+.|+.
T Consensus 117 S--vN~~vaHysP--~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~~ 192 (614)
T 4b6a_t 117 D--IDQISGGWCP--EIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQ 192 (614)
T ss_dssp E--ETTEEECCCC--CTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTTT
T ss_pred c--HHHcccCCCC--CCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCccccccccc
Confidence 5 7999999875 2232 47999999999999999999999999999931
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHh----------------CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHh
Q 011203 294 ---KFTSDQSLIYNAVLKAHNAVINAM----------------KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAA 354 (491)
Q Consensus 294 ---~~~~~~~~~~~~~~~a~~~~~~~l----------------kpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 354 (491)
..+.+..++..+++.|.+++++.+ +||++..+|-.+++++++ .+|+
T Consensus 193 ~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~gvt~~~It~~Iekvak----sY~c----------- 257 (614)
T 4b6a_t 193 PTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGITGQLIRTIVDTIAR----SYNC----------- 257 (614)
T ss_dssp TTSCBCHHHHHHHHHHHHHHHHHHHHC----------------STTCBHHHHHHHHHHHHH----TTTC-----------
T ss_pred ccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCCCcchHHHHHHHHHHHh----cCCc-----------
Confidence 235567788889999999888877 999999999999998863 4554
Q ss_pred hcccccCccccccccCCcccC
Q 011203 355 RLGAVFMPHGLGHFLGIDTHD 375 (491)
Q Consensus 355 ~~~~~~~~h~~GH~iGl~~he 375 (491)
.-...-+||.|+..+.+
T Consensus 258 ----k~Vegl~sH~i~r~~i~ 274 (614)
T 4b6a_t 258 ----GVVPGSRVRRIRRFLAG 274 (614)
T ss_dssp ----EECTTCEEEEEBTTBSS
T ss_pred ----EEecccccccccceecC
Confidence 23344568888865444
No 34
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=98.72 E-value=2.8e-09 Score=91.26 Aligned_cols=122 Identities=12% Similarity=0.011 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCCeeEEeecC
Q 011203 17 YFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPR 96 (491)
Q Consensus 17 ~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g~~~l~~~~ 96 (491)
|.+|+++|++.|++. ++ |+++|. ...|++|||||....++++| +. ++++||++.
T Consensus 4 ~~~Rl~~lr~~m~~~----~~--da~li~------------------~~~ni~YltGf~~~~~~llv-~~-~~~~l~~d~ 57 (131)
T 3il0_A 4 MQRRLERFDAKLVQS----GL--DALLVT------------------GQNNIYYLTDFWGTNATVFI-TK-NRRLFLTDS 57 (131)
T ss_dssp GGGHHHHHHHHHHHH----TC--SEEEEC------------------SHHHHHHHHSCCCSSEEEEE-ES-SCEEEEECT
T ss_pred HHHHHHHHHHHHHHc----CC--CEEEEe------------------cccccEEEeCcccCCeEEEE-EC-CCCEEEECc
Confidence 678999999999986 67 555443 23569999999877676666 43 488999998
Q ss_pred CCCcccc---ccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc---ccccc
Q 011203 97 LPPDYAV---WLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE---FETEL 170 (491)
Q Consensus 97 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~---~~~~~ 170 (491)
.+...+. +.-.+..+ ..+.+.+.+.+.+. +.++|++. .+ .++.....+. .++++
T Consensus 58 r~~~~a~~~~~~~~v~~~-----------~~~~~~l~~~l~~~----~~~~ig~e----~~-~~~~~~~~L~~~~~~~~~ 117 (131)
T 3il0_A 58 RYTLIAKQSVHGFDIIES-----------KDPLKDIVKFVEVD----KLETIGFD----NQ-VSFAYYQALQAIFEGYTL 117 (131)
T ss_dssp TSHHHHHHHCCSSEEEEC-----------SCHHHHHHHHHHHT----TCCEEEEE----TT-SCHHHHHHHHHHTTTSEE
T ss_pred hhHHHHHHhCCCcEEEEe-----------CCHHHHHHHHHHhc----CCCEEEEc----CC-CCHHHHHHHHhhcCCCEE
Confidence 7644221 11011100 01223445555443 55788763 22 2222222222 24567
Q ss_pred cchHHHHHHhHhcC
Q 011203 171 NTLHPILSECRVFK 184 (491)
Q Consensus 171 ~~~~~~i~~lR~vK 184 (491)
++++++++.+|+||
T Consensus 118 v~~~~~v~~lR~iK 131 (131)
T 3il0_A 118 SPQTNFMEELRMIK 131 (131)
T ss_dssp EEESSHHHHHHC--
T ss_pred EECchHHHHhccCC
Confidence 88899999999998
No 35
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=98.62 E-value=1.4e-08 Score=87.67 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCE----EEEEEeCCCeeEE
Q 011203 17 YFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGF----YGAIDIATGKSIL 92 (491)
Q Consensus 17 ~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~----~lvi~~~~g~~~l 92 (491)
+.+|+++|++.|++. ++ |+++|. ...|++|||||...+. +++| +.+|+++|
T Consensus 3 ~~~Rl~~lr~~m~~~----~~--da~li~------------------~~~ni~yltGf~g~~~er~~~lli-~~~g~~~l 57 (138)
T 3pn9_A 3 AMSKLQQILTYLESE----KL--DVAVVS------------------DPVTINYLTGFYSDPHERQMFLFV-LADQEPLL 57 (138)
T ss_dssp SCCHHHHHHHHHHHH----TC--SEEEEC------------------CHHHHHHHHSCCCCCTTSCCEEEE-ESSSCCEE
T ss_pred HHHHHHHHHHHHHHC----CC--CEEEEc------------------CcCceeeecCCCCCCccceEEEEE-eCCCCEEE
Confidence 356999999999986 67 655443 2356999999986553 4555 56789999
Q ss_pred eecCCCCccccccccCCChhHHHHHhcCceecch--hHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc---cc
Q 011203 93 FAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYT--DEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE---FE 167 (491)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~---~~ 167 (491)
|++..+...+. . ..+.+-..+. ++..+.+.+.+++.+.++|++ +.+..++.....+. .+
T Consensus 58 ~~d~~~~~~a~-~-----------~~~~~v~~~~~~~~~~~~l~~~l~~~~~~~vg~----e~~~~~~~~~~~l~~~~~~ 121 (138)
T 3pn9_A 58 FVPALEVERAS-S-----------TVSFPVVGYVDSENPWQKIKHALPQLDFKRVAV----EFDNLILTKYHGLKTVFET 121 (138)
T ss_dssp EEEGGGHHHHH-H-----------HCSSCEEEECTTSCHHHHHHHHSCCCCCCEEEE----CTTTCCHHHHHHHHHHSTT
T ss_pred EEeccchhhhh-c-----------cCCCcEEEEcCCCCHHHHHHHHHHhccCCeEEE----ecCcCCHHHHHHHHHHCCC
Confidence 99976543221 1 0011111111 122233444443334577865 33322222222222 24
Q ss_pred ccccchHHHHHHhHhcC
Q 011203 168 TELNTLHPILSECRVFK 184 (491)
Q Consensus 168 ~~~~~~~~~i~~lR~vK 184 (491)
++++++++++..+|+||
T Consensus 122 ~~~v~~~~~i~~lR~iK 138 (138)
T 3pn9_A 122 AEFDNLTPRIQRMRLIK 138 (138)
T ss_dssp CEEEECHHHHHHHTTCC
T ss_pred CeeeehHHHHHHHhhcC
Confidence 67889999999999998
No 36
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=98.48 E-value=2.6e-08 Score=86.29 Aligned_cols=124 Identities=11% Similarity=0.110 Sum_probs=71.3
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCE----EEEEEeCCCeeEEeec
Q 011203 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGF----YGAIDIATGKSILFAP 95 (491)
Q Consensus 20 R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~----~lvi~~~~g~~~l~~~ 95 (491)
|+++|++.|+++ ++ |+++|. +..|++|||||..... +++| +.+|+++||++
T Consensus 5 Rl~~l~~~m~~~----gl--Da~li~------------------~~~ni~YlTGf~~~~~er~~~llv-~~~g~~~l~~~ 59 (140)
T 3i7m_A 5 KLEQIQQWTAQH----HA--SMTYLS------------------NPKTIEYLTGFGSDPIERVLALVV-FPDQDPFIFAP 59 (140)
T ss_dssp HHHHHHHHHHHT----TC--SEEEEC------------------CHHHHHHHHCCCCCCCSSCCEEEE-CSSSCCEEEEE
T ss_pred HHHHHHHHHHHc----CC--CEEEEC------------------CCCcceeecCCCCCCccceEEEEE-eCCCCEEEEEe
Confidence 899999999985 77 655444 3457999999986543 4444 66789999999
Q ss_pred CCCCccc---cccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc---cccc
Q 011203 96 RLPPDYA---VWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE---FETE 169 (491)
Q Consensus 96 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~---~~~~ 169 (491)
..+...+ .|...+..+. +...+.+.+.+.+.+.. .+.++|++ |.+..++.....+. .+++
T Consensus 60 ~~~~~~a~~~~~~~~i~~~~--------d~~~~~~~l~~~l~~~~--~~~~~ig~----e~~~~~~~~~~~L~~~l~~~~ 125 (140)
T 3i7m_A 60 ALEVEVIKETGWQFPVIGYL--------DHENPWAMIADQVKQRH--VNPEHVAI----EKGQLQVARMEALAAQFSAPS 125 (140)
T ss_dssp GGGHHHHHTTTCCSCEEEEC--------TTSCHHHHHHHHHHHTT--CCCSEEEE----CTTTSCHHHHHHHHTTSSSCE
T ss_pred cccHHHHHhccCcCcEEEEc--------CCCCHHHHHHHHHHHhC--CCCCeEEE----ccCCCCHHHHHHHHHHCCCCE
Confidence 8765421 1221221111 01112344555565431 13467865 43332222222222 2467
Q ss_pred cc-chHHHHHHhHh
Q 011203 170 LN-TLHPILSECRV 182 (491)
Q Consensus 170 ~~-~~~~~i~~lR~ 182 (491)
++ +++++|.++|+
T Consensus 126 ~v~~~~~~i~~lR~ 139 (140)
T 3i7m_A 126 FDLDITSFIEHMRG 139 (140)
T ss_dssp EEEECHHHHHHC--
T ss_pred EecCHHHHHHHHHc
Confidence 88 99999999996
No 37
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=98.44 E-value=2e-08 Score=86.52 Aligned_cols=66 Identities=9% Similarity=0.028 Sum_probs=49.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCC
Q 011203 9 PPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATG 88 (491)
Q Consensus 9 ~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g 88 (491)
+++|+..++.+|+++|++.|++. ++ |+++|. ...|++|||||....++++| +.++
T Consensus 2 ~~~~~~~~~~~Rl~~l~~~m~~~----~~--da~li~------------------~~~n~~yltGf~~s~g~lvv-~~~~ 56 (135)
T 3qoc_A 2 NAPLADTRFLQRRRALSAQLAAK----RI--DAMLVT------------------HLTHIRYLSGFTGSNAALII-NKDL 56 (135)
T ss_dssp -CCCCCCHHHHHHHHHHHTHHHH----TC--SEEEEC------------------CHHHHHHHHCCCSSCCEEEE-ETTS
T ss_pred CCCcChHHHHHHHHHHHHHHHHC----CC--CEEEEc------------------ChhhCeeeecccCCCeEEEE-eeCC
Confidence 45688899999999999999986 67 665543 23468999999865555555 5468
Q ss_pred eeEEeecCCCC
Q 011203 89 KSILFAPRLPP 99 (491)
Q Consensus 89 ~~~l~~~~~~~ 99 (491)
+++||++....
T Consensus 57 ~a~l~td~Ry~ 67 (135)
T 3qoc_A 57 SARISTDGRYI 67 (135)
T ss_dssp CEEEEECGGGH
T ss_pred ccEEEeCcHHH
Confidence 99999986543
No 38
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=98.43 E-value=7.2e-08 Score=82.60 Aligned_cols=122 Identities=15% Similarity=0.154 Sum_probs=68.6
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCE----EEEEEeCCCeeEEee
Q 011203 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGF----YGAIDIATGKSILFA 94 (491)
Q Consensus 19 ~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~----~lvi~~~~g~~~l~~ 94 (491)
+|+++|++.|++. ++ |+++|. +..|++|||||..... +++| +.+|+++||+
T Consensus 3 ~Rl~~l~~~m~~~----gl--Da~li~------------------~~~ni~YltGf~~~~~er~~~l~v-~~~g~~~l~~ 57 (132)
T 3o5v_A 3 AKLDQIRLYLDQK----GA--ELAIFS------------------DPVTINYLTGFFCDPHERQLFLFV-YHDLAPVLFV 57 (132)
T ss_dssp HHHHHHHHHHHHT----TC--CEEEEC------------------CHHHHHHHHSCCCCCTTSCCEEEE-ESSSCCEEEE
T ss_pred HHHHHHHHHHHHC----CC--CEEEEc------------------CcchhhHhhCCCCCCccceEEEEE-eCCCCEEEEe
Confidence 6999999999985 67 655443 3457999999986442 4445 6678999999
Q ss_pred cCCCCccccc--cccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc--ccccc
Q 011203 95 PRLPPDYAVW--LGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE--FETEL 170 (491)
Q Consensus 95 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~ 170 (491)
+..+...+.- ...+..+. + .++..+.+.+.+++.+.++|++ |.+..++.....+. +.+++
T Consensus 58 ~~~y~~~a~~~~~~~i~~~~--------d----~~~~~~~l~~~l~~~~~~~ig~----e~~~~~~~~~~~L~~~~~~~~ 121 (132)
T 3o5v_A 58 PALEVARASQAISFPVFGYV--------D----SENPWEKIKAVLPNTAAKTIYA----EFDHLNVNKFHGLQTIFSGQF 121 (132)
T ss_dssp EGGGHHHHHHHCCSCEEEEC--------T----TSCHHHHHHHHCSCCCCSEEEE----CTTTCCHHHHHHHHTTCCSEE
T ss_pred ehhhhHHHHhcCCCcEEEEE--------C----CCCHHHHHHHHHhhccCCeEEE----ecCCCCHHHHHHHHHhCCCce
Confidence 9875432111 11111110 0 1122234444443324567865 43332222222222 12567
Q ss_pred cchHHHHHHhH
Q 011203 171 NTLHPILSECR 181 (491)
Q Consensus 171 ~~~~~~i~~lR 181 (491)
++++++|.++|
T Consensus 122 ~~~~~~v~~lR 132 (132)
T 3o5v_A 122 NNLTPYVQGMR 132 (132)
T ss_dssp EECHHHHHTC-
T ss_pred eccHHHHHHhC
Confidence 88999998877
No 39
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=98.41 E-value=2.8e-08 Score=85.15 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=69.4
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCE----EEEEEeCCCeeEEee
Q 011203 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGF----YGAIDIATGKSILFA 94 (491)
Q Consensus 19 ~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~----~lvi~~~~g~~~l~~ 94 (491)
+|+++|++.|++. ++ |+++|. +..|++|||||..... +++| +.+|+++||+
T Consensus 3 ~Rl~~l~~~m~~~----gl--Da~li~------------------~~~ni~YlTGf~~~~~er~~~l~v-~~~g~~~l~~ 57 (132)
T 3ooo_A 3 SKLNRIRHHLHSV----QA--ELAVFS------------------DPVTVNYLTGFFCDPHERQMFLFV-YEDRDPILFV 57 (132)
T ss_dssp HHHHHHHHHHHHT----TC--SEEEEC------------------CHHHHHHHHSCCCCCTTSCCEEEE-ESSSCCEEEE
T ss_pred hHHHHHHHHHHHC----CC--CEEEEc------------------CcchHHHHhCCCCCCCcceEEEEE-eCCCCEEEEE
Confidence 6999999999985 77 665443 3456999999986442 4445 6678999999
Q ss_pred cCCCCccccc--cccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc--ccccc
Q 011203 95 PRLPPDYAVW--LGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE--FETEL 170 (491)
Q Consensus 95 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~~ 170 (491)
+..+...+.- ...+..+. + .++..+.+.+.+++.+.++|++ |.+..++.....+. +.+++
T Consensus 58 ~~~y~~~a~~~~~~~v~~~~--------d----~~~~~~~l~~~l~~~~~~~ig~----e~~~~~~~~~~~L~~~~~~~~ 121 (132)
T 3ooo_A 58 PALEVSRAKQSVPFPVFGYI--------D----SENPWQKIASNLPSFSVSKVLA----EFDNLNVTKFQGLQTVFDGHF 121 (132)
T ss_dssp EGGGHHHHHHHCSSCEEEEC--------T----TSCHHHHHHHHCSCCCCSEEEE----CTTTCCHHHHHHHHHHCCSEE
T ss_pred eccchHHHHhcCCCcEEEEe--------C----CCCHHHHHHHHHhhccCCeEEE----ecCCcCHHHHHHHHHhCCcce
Confidence 9875432111 10111110 0 1123344444444334567865 43332222222222 12567
Q ss_pred cchHHHHHHhH
Q 011203 171 NTLHPILSECR 181 (491)
Q Consensus 171 ~~~~~~i~~lR 181 (491)
++++++|.++|
T Consensus 122 ~~~~~~v~~lR 132 (132)
T 3ooo_A 122 ENLTPYIQNMR 132 (132)
T ss_dssp EECCHHHHTTC
T ss_pred echHHHHHhcC
Confidence 88888888776
No 40
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=98.26 E-value=1e-07 Score=81.64 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCCeeEEee
Q 011203 15 ELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFA 94 (491)
Q Consensus 15 ~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g~~~l~~ 94 (491)
..|.+|+++|++.|++. ++ |+++|. ...|++|||||....+++++ . +++++||+
T Consensus 6 ~~~~~Rl~~l~~~m~~~----~~--da~li~------------------~~~n~~YltGf~~~~~~~vv-~-~~~~~l~t 59 (132)
T 3ovk_A 6 GFLEQRLGHCLRQMAEK----GL--EALLVT------------------HLTNSYYLTGFSGTAATVLI-T-AKRRVLIT 59 (132)
T ss_dssp HHHHHHHHHHHHHHHHH----TC--CEEEEC------------------SHHHHHHHHCCCCSCCEEEE-E-SSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHC----CC--CEEEEc------------------CcccceeeeCccCCCEEEEE-E-CCccEEEE
Confidence 46889999999999986 67 555443 23569999999876655555 3 58999999
Q ss_pred cCCCCc
Q 011203 95 PRLPPD 100 (491)
Q Consensus 95 ~~~~~~ 100 (491)
+..+..
T Consensus 60 d~ry~~ 65 (132)
T 3ovk_A 60 DSRYTL 65 (132)
T ss_dssp CTTTHH
T ss_pred CchhHH
Confidence 976543
No 41
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=97.77 E-value=3.4e-07 Score=98.65 Aligned_cols=175 Identities=9% Similarity=0.016 Sum_probs=106.1
Q ss_pred HHHHHHHHHHhhhhhccCC-----CCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCCeeEE
Q 011203 18 FINREKVLNSLRQHLTETS-----RPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSIL 92 (491)
Q Consensus 18 ~~R~~rl~~~~~~~~~~~~-----~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g~~~l 92 (491)
.+|+++|++.|++. + + |++ |+.+...|+.. |.=....+..|||||.++.+.+||+. ++..|
T Consensus 7 ~~Rl~~LR~~m~~~----~~~~~~l--da~-lv~~~D~h~se-----y~~~~~~~~~ylsGFtGSaG~~vVt~--~~a~l 72 (623)
T 3ctz_A 7 SELLRQLRQAMRNS----EYVTEPI--QAY-IIPSGDAHQSE-----YIAPCDCRRAFVSGFDGSAGTAIITE--EHAAM 72 (623)
T ss_dssp HHHHHHHHHHTTCT----TTCSSCC--SEE-EECSCCTTCCS-----SCCGGGCHHHHHHSCCSSCCEEEEES--SCEEE
T ss_pred HHHHHHHHHHHHhc----CCCCCce--eEE-EECCCCccccc-----cccchhccceeccCcCCCceEEEEec--CeeEE
Confidence 46999999999885 6 6 565 44454454433 22223456889999997777777743 57888
Q ss_pred eecCCCCcc-ccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCccccc-----c
Q 011203 93 FAPRLPPDY-AVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE-----F 166 (491)
Q Consensus 93 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~-----~ 166 (491)
|++...... +.... ..++... .+.. ....+.++|.+.+. ++++||+ +....++.....+. .
T Consensus 73 ~tDgRY~~QA~~ql~--~~~~l~~--~~~~---~~~~~~~~l~~~l~--~~~~vG~----d~~~~s~~~~~~l~~~l~~~ 139 (623)
T 3ctz_A 73 WTDGRYFLQAAKQMD--SNWTLMK--MGLK---DTPTQEDWLVSVLP--EGSRVGV----DPLIIPTDYWKKMAKVLRSA 139 (623)
T ss_dssp EECGGGHHHHHHHBC--TTEEEEE--TTST---TCCCHHHHHHHHCC--TTCEEEE----CGGGSBHHHHHHHHHHHHHT
T ss_pred EECcHHHHHHHHhcC--CceEEEE--ecCC---CCccHHHHHHHhCc--CCCEEEE----CcccccHHHHHHHHHHHHhc
Confidence 886543211 00000 0010000 0000 11235566665432 4578865 33222222222222 2
Q ss_pred cccccch-HHHHHHh---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHH
Q 011203 167 ETELNTL-HPILSEC---RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMES 221 (491)
Q Consensus 167 ~~~~~~~-~~~i~~l---R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a 221 (491)
+++++++ .++++.+ |.+|++.| .++.+++++.+.+..-++.++++++|.++.+
T Consensus 140 ~~~lv~~~~~lvd~iw~~Rp~k~~~e--~~~~~~~~ag~~~~~rl~~lr~~m~e~~~da 196 (623)
T 3ctz_A 140 GHHLIPVKENLVDKIWTDRPERPCKP--LLTLGLDYTGISWKDKVADLRLKMAERNVMW 196 (623)
T ss_dssp TCEEEECSSCHHHHHCTTCCCCCCCC--CEECCHHHHSSCHHHHHHHHHHHHHTTTEEE
T ss_pred CCEEEecCCCcHHHHhhcCCCCCchh--hhhcchhhcChhHHHHHHHHHHHHHHcCCCE
Confidence 3456677 5889999 99999999 8999999999999888888888888877665
No 42
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=95.34 E-value=0.065 Score=53.28 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
..|++.+.+.++++.+.+.+|||++-.||.+.+++.+.+
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~ 85 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRT 85 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999888754
No 43
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=93.05 E-value=0.45 Score=46.76 Aligned_cols=88 Identities=14% Similarity=0.265 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccC-CcccC
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG-IDTHD 375 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he 375 (491)
+.+|++-+.+.++++.+++.+|||++-.||...+++.+. ++|.... +....-|+..++-+.- ...|
T Consensus 70 ~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~----~~g~~~~--------~~~~~~fp~iv~~g~n~~~~H- 136 (337)
T 4fuk_A 70 QRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATV----ERNMYPS--------PLNYYGFPKSVCTSVNEVICH- 136 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH----HTTCEET--------TTTGGGCCSSSEEEETTEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH----HcCCCcc--------CCCCCCcCceeeccccccccC-
Confidence 357888999999999999999999999999998887763 4554221 0011122222221111 0011
Q ss_pred CCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203 376 PGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 414 (491)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~ 414 (491)
...++++|++|.++.+..|.+.
T Consensus 137 -----------------~~~~~~~l~~GD~v~iD~g~~~ 158 (337)
T 4fuk_A 137 -----------------GIPDSRELEEGDILNIDVSSYL 158 (337)
T ss_dssp -----------------CCCCSCBCCTTCEEEEEEEEEE
T ss_pred -----------------CCCCCccccCCCEEEEecceeE
Confidence 1135789999999999998875
No 44
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=91.91 E-value=0.48 Score=49.65 Aligned_cols=120 Identities=11% Similarity=0.134 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCcccccc
Q 011203 297 SDQSLIYNAVLKAHNAVINAM---------KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGH 367 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~l---------kpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH 367 (491)
...|.+-+.+..+++.+++.+ +||++..||.+...+.|.+.+.+ + |..+....|++|
T Consensus 47 tKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~ak--v------------yk~K~~~KGIAF 112 (614)
T 4b6a_t 47 NKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQ--Y------------YKNKVNERGIAI 112 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHT--S------------STTCSCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHh--h------------hcCCcccCCCcc
Confidence 456777777888888887765 67788999999999998775432 1 122344567888
Q ss_pred ccCCcccCCC-CCCCCCCCCC-CC----C---CcCcCCCCccCCCCEEEECCccccccccccccccccccccccccchhc
Q 011203 368 FLGIDTHDPG-GYPKGTERSK-EP----G---LKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIG 438 (491)
Q Consensus 368 ~iGl~~he~~-~~~~~~~~~~-~~----~---~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (491)
..++.+-++. +|.+-...+. +. . ......+.+|++|.|+-|..|+.+
T Consensus 113 PT~ISvN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHI------------------------ 168 (614)
T 4b6a_t 113 PTTIDIDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHI------------------------ 168 (614)
T ss_dssp EEEEEETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEE------------------------
T ss_pred CceecHHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEE------------------------
Confidence 8888777631 2322110000 00 0 000123578999999999999987
Q ss_pred ccCCcceeEEceEEEEeCC
Q 011203 439 RFKDFGGVRIESDVLVTAN 457 (491)
Q Consensus 439 ~~~g~ggvried~v~Vte~ 457 (491)
.|+ .+-..+||+|.+.
T Consensus 169 --DGy-iadvA~Tvvvg~~ 184 (614)
T 4b6a_t 169 --DGY-TSEVSHTMVIYPV 184 (614)
T ss_dssp --TTE-EEEEEEEEECCCC
T ss_pred --CCe-EEEEEEEEEECCc
Confidence 454 7788999999754
No 45
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=90.31 E-value=1.1 Score=42.93 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
+..|++.+.+.++.+.+++.++||++-.||...+++.+.+
T Consensus 4 ~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~ 43 (295)
T 1xgs_A 4 EKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIME 43 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Confidence 3578889999999999999999999999999999888743
No 46
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=89.63 E-value=1.1 Score=44.34 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
..|++-+.+.++.+.+++.++||++-.||.+.++..+.+
T Consensus 49 ~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~ 87 (360)
T 2nw5_A 49 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRT 87 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 467777888888999999999999999999988877643
No 47
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=89.26 E-value=2.9 Score=39.13 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-CcceEEeeCCCC----cccccCCCCCCCCCccCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGENS----AVLHYGHAAAPNDRTFED 266 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~-~~~~iv~sG~~~----~~~h~~~~~~p~~~~l~~ 266 (491)
.++..+++.++++++++.++||++-.||.+++...+... |.... .+... ..|... .+.++.. ..++.+|++
T Consensus 119 ~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~-g~~~~~~~~GH-giG~~~~e~p~i~~~~~--~~~~~~L~~ 194 (264)
T 3tb5_A 119 IDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGE-GYGVVRDFVGH-GIGPTIHESPMIPHYGE--AGKGLRLKE 194 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHT-TCEECCSCCEE-ECSSSSSEEEEECSSCC--TTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHc-CCceeeeceec-CCCCCCccCCccCcccc--CCCCCCccC
Confidence 345677888899999999999999999998888777664 43211 11100 111111 0111110 113568999
Q ss_pred CCeEEEEeceEe
Q 011203 267 GDMALLDMGAEY 278 (491)
Q Consensus 267 Gd~v~~D~g~~~ 278 (491)
|.++.++-|..+
T Consensus 195 Gmv~tiEPgiy~ 206 (264)
T 3tb5_A 195 GMVITIEPMVNT 206 (264)
T ss_dssp TCEEEECCEEES
T ss_pred CcEEEEeeeEEc
Confidence 999999988754
No 48
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=88.69 E-value=1.5 Score=43.37 Aligned_cols=38 Identities=13% Similarity=0.101 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
..|++.+.+.++.+.+++.++||++-.||.+.+++.+.
T Consensus 111 ~mR~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~ 148 (368)
T 3s6b_A 111 RIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFII 148 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 35677778888889999999999999999999887764
No 49
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=88.45 E-value=4.2 Score=38.01 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-CcceEEeeCCCC----cccccCCCCCCCCCccCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGENS----AVLHYGHAAAPNDRTFED 266 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~-~~~~iv~sG~~~----~~~h~~~~~~p~~~~l~~ 266 (491)
.+++.+++.++++++++.++||++-.||.+++...+.+. |.... .+.. =.-|... .++++.. ..++.+|++
T Consensus 123 ~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~-G~~~~~~~~G-HgiG~~~hE~p~i~~~~~--~~~~~~L~~ 198 (262)
T 3mx6_A 123 PKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKH-NYSVVRDYTG-HGIGRVFHDKPSILNYGR--NGTGLTLKE 198 (262)
T ss_dssp HHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHT-TCEECCSCCE-EECSSSSSEEEEECSSCC--TTCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCccCCCccc-cccCCcccCCCcccccCC--CCCCCEeCC
Confidence 466777788899999999999999999999888877665 54311 1100 0112111 1223211 114678999
Q ss_pred CCeEEEEeceEe
Q 011203 267 GDMALLDMGAEY 278 (491)
Q Consensus 267 Gd~v~~D~g~~~ 278 (491)
|.++.++-|...
T Consensus 199 Gmv~tiEPgiy~ 210 (262)
T 3mx6_A 199 GMFFTVEPMINA 210 (262)
T ss_dssp TCEEEECCEEES
T ss_pred CCEEEEeCEEEc
Confidence 999999988743
No 50
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=88.23 E-value=3.7 Score=38.45 Aligned_cols=84 Identities=11% Similarity=0.114 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-CcceEEeeCCC----CcccccCCCCCCCCCccC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGEN----SAVLHYGHAAAPNDRTFE 265 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~-~~~~iv~sG~~----~~~~h~~~~~~p~~~~l~ 265 (491)
..+++.+++.++++++++.++||++-.||..++...+.+. |.... .+..- .-|.. ..++++.. ..++.+|+
T Consensus 131 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~-G~~~~~~~~GH-giG~~~he~p~i~~~~~--~~~~~~L~ 206 (262)
T 1o0x_A 131 RGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESV-GFNVIRDYVGH-GVGRELHEDPQIPNYGT--PGTGVVLR 206 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHT-TCEECCSSCEE-ECSSSSSEEEEECSCCC--TTCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCcccCCcccC-cccccccCCCccCCCCC--CCCCCccC
Confidence 4567778888899999999999999999999988887764 54311 11000 11111 11122110 01467899
Q ss_pred CCCeEEEEeceEe
Q 011203 266 DGDMALLDMGAEY 278 (491)
Q Consensus 266 ~Gd~v~~D~g~~~ 278 (491)
+|.++.++.|...
T Consensus 207 ~Gmv~tiEPgi~~ 219 (262)
T 1o0x_A 207 KGMTLAIEPMVSE 219 (262)
T ss_dssp TTCEEEECCEEES
T ss_pred CCCEEEECCEEEc
Confidence 9999999988754
No 51
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=87.42 E-value=4.8 Score=37.57 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-CCcceEEeeCCC----CcccccCCCCCCCCCccC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-CSYTCICATGEN----SAVLHYGHAAAPNDRTFE 265 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-~~~~~iv~sG~~----~~~~h~~~~~~p~~~~l~ 265 (491)
..+++.+++.++++++++.++||++-.+|.+++...+.+. |... ..+... .-|.. ..++++.. ..++.+|+
T Consensus 120 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~-G~~~~~~~~GH-giG~~~he~p~i~~~~~--~~~~~~l~ 195 (263)
T 2gg2_A 120 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE-GFSVVREYCGH-GIGRGFHEEPQVLHYDS--RETNVVLK 195 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHT-TCEECSSCCEE-ECSSSSSEEEEECSSCC--TTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEECCCcccc-cCCcceecCCcccCccC--CCCCCCcC
Confidence 3567778888899999999999999999999988877665 5431 111100 11211 01122110 11467899
Q ss_pred CCCeEEEEeceEe
Q 011203 266 DGDMALLDMGAEY 278 (491)
Q Consensus 266 ~Gd~v~~D~g~~~ 278 (491)
+|.++.++-|...
T Consensus 196 ~Gmv~tiEPgi~~ 208 (263)
T 2gg2_A 196 PGMTFTIEPMVNA 208 (263)
T ss_dssp TTCEEEECCEEES
T ss_pred CCCEEEEecEEEc
Confidence 9999999988753
No 52
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=86.47 E-value=3.6 Score=38.14 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
..|++.+.+.++.+.+++.++||++-.||...+++.+.+
T Consensus 11 ~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~ 49 (252)
T 1qxy_A 11 ALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEE 49 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHH
Confidence 357777888888999999999999999999988887643
No 53
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=86.42 E-value=4.3 Score=39.49 Aligned_cols=83 Identities=12% Similarity=0.123 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-CCcceEEeeCCCC----cccccCCCCCCCCCccC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-CSYTCICATGENS----AVLHYGHAAAPNDRTFE 265 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-~~~~~iv~sG~~~----~~~h~~~~~~p~~~~l~ 265 (491)
..+++.+++.++++++++.++||++-.||.+++.+.+.+. |... ..+..- .-|... .++||.. ...+.+|+
T Consensus 189 ~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~-G~~~~~~~~GH-GIG~~~HE~P~i~~~~~--~~~~~~L~ 264 (329)
T 2b3h_A 189 GARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQAN-GFSVVRSYCGH-GIHKLFHTAPNVPHYAK--NKAVGVMK 264 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHT-TCEECCSCCEE-ECSSSSSEEEEECCSSS--CCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc-CCCccCCcccC-CcCcccccCCccccccc--CCCCCEEC
Confidence 3467777888899999999999999999999988887765 5431 111100 112211 1233321 01247899
Q ss_pred CCCeEEEEeceE
Q 011203 266 DGDMALLDMGAE 277 (491)
Q Consensus 266 ~Gd~v~~D~g~~ 277 (491)
+|.++.++-|..
T Consensus 265 ~GMVftIEPgiy 276 (329)
T 2b3h_A 265 SGHVFTIEPMIC 276 (329)
T ss_dssp TTCEEEECCEEE
T ss_pred CCCEEEEeCCcC
Confidence 999999998875
No 54
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=86.06 E-value=3.7 Score=39.02 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeC--CC----CcccccCCCCCCCCCcc
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATG--EN----SAVLHYGHAAAPNDRTF 264 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG--~~----~~~~h~~~~~~p~~~~l 264 (491)
.++++.+++.++++++++.++||++-.||.+++...+.+. |... +...+.-| .. ..+.++.. ..++.+|
T Consensus 155 ~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~-G~~~--~~~~~GHgiG~~~hE~P~i~~~~~--~~~~~~L 229 (285)
T 3pka_A 155 EHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRF-GYNV--VRDFTGHGIGTTFHNGLVVLHYDQ--PAVETIM 229 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTT-TCEE--CCSSCEEBCSSSSSCSCEECSSCC--TTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHc-CCcc--CCCcccccCCCcccCCCcccCccC--CCCCCcc
Confidence 3567777888899999999999999999998887776543 5431 11111111 11 11222210 1146789
Q ss_pred CCCCeEEEEeceEe------------------CceEeeeeeEEee
Q 011203 265 EDGDMALLDMGAEY------------------QFYGSDITCSFPV 291 (491)
Q Consensus 265 ~~Gd~v~~D~g~~~------------------~gY~sd~tRt~~v 291 (491)
++|.++.++-|... +.|..-+.-|+.|
T Consensus 230 ~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~V 274 (285)
T 3pka_A 230 QPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLV 274 (285)
T ss_dssp CTTBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEE
T ss_pred CCCCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEE
Confidence 99999999988754 2345566777777
No 55
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=85.91 E-value=3.8 Score=38.93 Aligned_cols=38 Identities=29% Similarity=0.267 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 335 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~ 335 (491)
..|++.+.+.++...+++.++||++-.||...+...+.
T Consensus 42 ~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~ 79 (286)
T 3tav_A 42 AMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIR 79 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Confidence 35777778888888999999999999999999987764
No 56
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=85.65 E-value=1.9 Score=43.36 Aligned_cols=39 Identities=13% Similarity=0.236 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 336 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~ 336 (491)
..|++-+.+.++++.+++.++||++-.||...+.+.+.+
T Consensus 27 ~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~ 65 (401)
T 2q8k_A 27 KYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIME 65 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 356777888888999999999999999999999988765
No 57
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=84.82 E-value=9.6 Score=37.21 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEE--eeCCCCcccccCCC-CCCCCCccCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENSAVLHYGHA-AAPNDRTFEDG 267 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv--~sG~~~~~~h~~~~-~~p~~~~l~~G 267 (491)
.++++..++.+++.++++.++||++-.+|.+++...+.+. |... .|..-+ .-|-+ .|-.+. ..-++.+|++|
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~-g~~~-~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~G 313 (356)
T 3q6d_A 239 KLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEK-GYGE-YFGHSTGHGIGLE---IHEAPGLAFRSDTVLEPG 313 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCGG-GCCSCSEEECSSS---SSEEEEESTTCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCcc-cCCCCCcccCCCC---cCcCCCCCCCCCCCcCCC
Confidence 3567777888899999999999999999999988888765 5421 111111 11211 121100 01146789999
Q ss_pred CeEEEEeceEeCc-eEeeeeeEEee
Q 011203 268 DMALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 268 d~v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
.++.++-|.-..| +..-+.-|+.|
T Consensus 314 mv~tiEPgiy~~g~~gvriEd~v~v 338 (356)
T 3q6d_A 314 MAVTVEPGIYIPGIGGVRIEDDIIV 338 (356)
T ss_dssp CEEEECCEEEETTTEEEECBEEEEE
T ss_pred CEEEECCEEEECCCCeEEEccEEEE
Confidence 9999999987655 56677778877
No 58
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=83.43 E-value=9.5 Score=37.72 Aligned_cols=97 Identities=14% Similarity=0.105 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCC-CCCCCccCCCCeE
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAA-APNDRTFEDGDMA 270 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~-~p~~~~l~~Gd~v 270 (491)
++++.+++.+++.++++.++||++-.||.+.+...+.+. |... .|..-+.-|.-- ..|-.+.. ..++.+|++|.++
T Consensus 260 ~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~-G~~~-~~~h~~GHgiGl-~~hE~P~i~~~~~~~L~~Gmv~ 336 (378)
T 4ege_A 260 VAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADA-GLAE-YFVHRTGHGIGL-CVHEEPYIVAGNELPLVAGMAF 336 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCGG-GCCSCSEEECSS-SSSEEEEECTTCCCBCCTTBEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCC-cCCCCCcccCCC-CcCCCCccCCCCCCccCCCCEE
Confidence 567778888899999999999999999999988888765 5421 111111111111 11211000 1156789999999
Q ss_pred EEEeceEeCc-eEeeeeeEEee
Q 011203 271 LLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 271 ~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
.++-|....| +..-+.-|+.|
T Consensus 337 tiEPgiy~~g~~gvriEd~v~V 358 (378)
T 4ege_A 337 SIEPGIYFPGRWGARIEDIVVV 358 (378)
T ss_dssp EECCEEEETTTEEEECBEEEEE
T ss_pred EECCEEEeCCccEEEEeeEEEE
Confidence 9999987654 56777777777
No 59
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=83.06 E-value=2.3 Score=43.60 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV 343 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~ 343 (491)
.+|++.+.+.++++.+.+.++||++-.||...+...+.+.+.+.|.
T Consensus 168 ~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~Ga 213 (478)
T 1b6a_A 168 DFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGL 213 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTT
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhcCC
Confidence 3566677788888899999999999999988877776554445553
No 60
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=81.96 E-value=12 Score=36.55 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEE--eeCCCC-cccccCCCCCCCCCccCCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENS-AVLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv--~sG~~~-~~~h~~~~~~p~~~~l~~Gd 268 (491)
.+++..++.+++.++++.++||++-.||.+++...+.+. |... .|..-+ .-|-+. ..|... ..++.+|++|.
T Consensus 243 ~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~-g~~~-~~~h~~GHgiGl~~he~p~i~---~~~~~~l~~gm 317 (359)
T 2zsg_A 243 VKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREK-GYGE-FFGHSLGHGIGLEVHEGPAIS---FRNDSPLPENV 317 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCGG-GBCSCSEEECSSSSSEEEEES---TTCCCBCCTTB
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCcc-cCCCCCccccCcccCCCCCcC---CCCCCCcCCCC
Confidence 567788888999999999999999999999998887765 5421 111111 122211 011111 11467899999
Q ss_pred eEEEEeceEeCc-eEeeeeeEEee
Q 011203 269 MALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
++.++-|.-..| +..-+.-|+.|
T Consensus 318 v~tiEPgiy~~~~~gvriEd~v~v 341 (359)
T 2zsg_A 318 VFTVEPGIYLEGKFGIRIEEDVVL 341 (359)
T ss_dssp EEEECCEEEETTTEEEECBEEEEE
T ss_pred EEEECCEEEECCCcEEEEeeEEEE
Confidence 999999887655 46666777777
No 61
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=80.49 E-value=17 Score=35.47 Aligned_cols=95 Identities=13% Similarity=0.162 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEE--eeCCCC-cccccCCCCCCCCCccCCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENS-AVLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv--~sG~~~-~~~h~~~~~~p~~~~l~~Gd 268 (491)
.+++..++.+++.++++.++||++-.+|.+.+...+.+. |... .|..-+ .-|-+- ..|... ..++.+|++|.
T Consensus 237 ~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~-g~~~-~~~h~~GHgiGl~~hE~p~i~---~~~~~~l~~Gm 311 (351)
T 1wy2_A 237 QKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEY-GYGE-YFNHSLGHGVGLEVHEWPRVS---QYDETVLREGM 311 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCGG-GCCSCSEEECSSSSSEEEEES---TTCCCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCcc-cCCCCcccccCCCcCCCCccC---CCCCCCcCCCC
Confidence 467778888999999999999999999999988887765 5321 111111 112111 011111 11467899999
Q ss_pred eEEEEeceEeCc-eEeeeeeEEee
Q 011203 269 MALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
++.++-|....| +..-+.-|+.|
T Consensus 312 v~tiEPgiy~~g~~gvriEd~v~V 335 (351)
T 1wy2_A 312 VITIEPGIYIPKIGGVRIEDTILI 335 (351)
T ss_dssp EEEECCEEEETTTEEEECBEEEEE
T ss_pred EEEECCEEEeCCCCeEEEeeEEEE
Confidence 999999887643 55666666666
No 62
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=79.98 E-value=18 Score=36.32 Aligned_cols=99 Identities=12% Similarity=0.038 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcC-CCCCCCcceEEeeCCCCcccccCCC--CCCCCCccCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG-GCRHCSYTCICATGENSAVLHYGHA--AAPNDRTFEDG 267 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~-g~~~~~~~~iv~sG~~~~~~h~~~~--~~p~~~~l~~G 267 (491)
..+++..++.+++.++++.++||++-.+|.+.+...+.+.+ |.. ..|...+.-|.--. .|=.+. ...++.+|++|
T Consensus 307 ~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~-~~~~h~~GHgiGl~-~he~p~~~~~~~~~~l~~G 384 (444)
T 3cb6_A 307 EQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLE-PNFVRNLGAGIGIE-FRESSLLVNAKNPRVLQAG 384 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGG-GGBCSCCEEECSSS-SCBGGGCCSTTCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhH-hhcccccccccCcc-ccCCccccCCCCCcccCCC
Confidence 35677788889999999999999999999999988887652 221 11111112111111 121100 01156789999
Q ss_pred CeEEEEeceE-----------eCceEeeeeeEEee
Q 011203 268 DMALLDMGAE-----------YQFYGSDITCSFPV 291 (491)
Q Consensus 268 d~v~~D~g~~-----------~~gY~sd~tRt~~v 291 (491)
-++.++-|.- .+++..-+.-|++|
T Consensus 385 mv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~v 419 (444)
T 3cb6_A 385 MTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQI 419 (444)
T ss_dssp CEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEEC
T ss_pred CEEEEEeccccccCcccccccCCceEEEEEEEEEE
Confidence 9999999885 34688888888888
No 63
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=79.58 E-value=15 Score=35.94 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEE--eeCCCCcccccCCC-CCCCCCccCCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENSAVLHYGHA-AAPNDRTFEDG 267 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv--~sG~~~~~~h~~~~-~~p~~~~l~~G 267 (491)
..+++.+++.+++.++++.++||++-.||.+++...+.+. |.. ..|..-+ .-|-. .|-.+. ...++.+|++|
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~-g~~-~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~G 313 (356)
T 1wn1_A 239 RLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKA-GYG-EYFIHRTGHGLGLD---VHEEPYIGPDGEVILKNG 313 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTT-TCG-GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCc-ccCCCCCcccCCCc---cCCCcccCCCCCCCcCCC
Confidence 3567778888999999999999999999999888877654 542 1121111 11211 121100 01156789999
Q ss_pred CeEEEEeceEeC-ceEeeeeeEEee
Q 011203 268 DMALLDMGAEYQ-FYGSDITCSFPV 291 (491)
Q Consensus 268 d~v~~D~g~~~~-gY~sd~tRt~~v 291 (491)
.++.++-|.-.. .+..-+.-|+.|
T Consensus 314 mv~tiEPgiy~~g~~gvriEd~v~V 338 (356)
T 1wn1_A 314 MTFTIEPGIYVPGLGGVRIEDDIVV 338 (356)
T ss_dssp CEEEECCEEEETTTEEEECBEEEEE
T ss_pred CEEEECCeeEeCCCcEEEEeeEEEE
Confidence 999999998664 466667777777
No 64
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=78.68 E-value=19 Score=35.29 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEe--eCCCCc-ccccCCCCCCCCCccCCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGENSA-VLHYGHAAAPNDRTFEDGD 268 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~--sG~~~~-~~h~~~~~~p~~~~l~~Gd 268 (491)
.+++..++.++++.+++.++||++-.++.+.+...+.+. |... .|..-+. -|-... .|... ..++.+|++|.
T Consensus 261 ~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~-g~~~-~~~h~~GHgiGl~~hE~P~i~---~~~~~~L~~Gm 335 (377)
T 4fkc_A 261 VKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKY-GYGE-YFIHRTGHGLGIDVHEEPYIS---PGNKKILKDGM 335 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHT-TCTT-TCCSCSEEECSSSSSEEEEEC---SSCCCBCCTTC
T ss_pred HHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHh-cccc-cCCCCCeEeCCCccccCCccc---CCCCCEeCCCC
Confidence 466777788889999999999999999999888877765 5421 1111111 122110 01111 11567899999
Q ss_pred eEEEEeceEeCc-eEeeeeeEEee
Q 011203 269 MALLDMGAEYQF-YGSDITCSFPV 291 (491)
Q Consensus 269 ~v~~D~g~~~~g-Y~sd~tRt~~v 291 (491)
++.++-|.-..| +..-+.-++.|
T Consensus 336 v~tiEPgiy~~g~~GvriEd~v~V 359 (377)
T 4fkc_A 336 VFTIEPGIYLQGKFGVRIEDDVAL 359 (377)
T ss_dssp EEEECCEEEETTTEEEECBEEEEE
T ss_pred EEEECCeeEECCccEEEEccEEEE
Confidence 999998876654 44555566665
No 65
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=76.77 E-value=14 Score=37.44 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-ccCCCcHHHHHHHHHHHHHHcC-CCCCCCcceEEeeCCCCcccccCCC--CCCC-CCccC
Q 011203 191 LIQFANDISSEAHVEVMKK-TRVGMKEYQMESMFLHHTYMYG-GCRHCSYTCICATGENSAVLHYGHA--AAPN-DRTFE 265 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~-i~~G~tE~ei~a~~~~~~~~~~-g~~~~~~~~iv~sG~~~~~~h~~~~--~~p~-~~~l~ 265 (491)
.++++..++.+++.++++. ++||++-.+|.+.+...+.+.+ |.. ..|..-+.-|..- ..|-.+. ...+ +.+|+
T Consensus 314 ~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~-~~~~h~~GHgiGl-~~hE~p~~~~~~~~~~~l~ 391 (467)
T 3biq_A 314 EMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELV-PNFTKNIGSLIGL-EFRDSNFILNVKNDYRKIQ 391 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGG-GGBCSCCEEECSS-SSCCGGGBSSTTCCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchh-hcCCCCccccccc-ccccCCccCCCCCCCCccC
Confidence 3577788888999999999 9999999999999988887753 121 1121111111111 1121100 0114 67899
Q ss_pred CCCeEEEEeceE-------eCceEeeeeeEEee
Q 011203 266 DGDMALLDMGAE-------YQFYGSDITCSFPV 291 (491)
Q Consensus 266 ~Gd~v~~D~g~~-------~~gY~sd~tRt~~v 291 (491)
+|.++.++-|.. .+.|..-+.-|++|
T Consensus 392 ~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~V 424 (467)
T 3biq_A 392 RGDCFNISFGFNNLKDSQSANNYALQLADTVQI 424 (467)
T ss_dssp TTCEEEEEEEEEEECCSSCSSCEEEEEEEEEEC
T ss_pred CCCEEEEeCeEEeeecCCCCCccEEEEEEEEEE
Confidence 999999999986 34678888889988
No 66
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=76.53 E-value=17 Score=36.65 Aligned_cols=99 Identities=14% Similarity=0.009 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH---cCCCC------------C-CCcceEEeeCCCCcccccCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---YGGCR------------H-CSYTCICATGENSAVLHYGH 255 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~---~~g~~------------~-~~~~~iv~sG~~~~~~h~~~ 255 (491)
.+++..++.+++.++++.++||++-.||..++...+.+ ..|.. . .-|+.-+.-|..- ..|-.+
T Consensus 286 ~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl-~~he~p 364 (440)
T 2v3z_A 286 QREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGL-DVHDVG 364 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSS-SSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCc-ccccCC
Confidence 46777888889999999999999999998877766642 11210 0 0111001111100 112111
Q ss_pred CC-CCCCCccCCCCeEEEEeceEeC----------ceEeeeeeEEee
Q 011203 256 AA-APNDRTFEDGDMALLDMGAEYQ----------FYGSDITCSFPV 291 (491)
Q Consensus 256 ~~-~p~~~~l~~Gd~v~~D~g~~~~----------gY~sd~tRt~~v 291 (491)
.. ..++.+|++|.++.++-|.-.. ++..-+.-|+.|
T Consensus 365 ~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlV 411 (440)
T 2v3z_A 365 VYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVI 411 (440)
T ss_dssp CCCGGGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEE
T ss_pred CcCCCCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEE
Confidence 00 1146789999999999888765 577788888887
No 67
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=74.10 E-value=26 Score=34.61 Aligned_cols=87 Identities=7% Similarity=-0.049 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC---CcceEEeeCCCCcccccCC--CCCCCCCccC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC---SYTCICATGENSAVLHYGH--AAAPNDRTFE 265 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~---~~~~iv~sG~~~~~~h~~~--~~~p~~~~l~ 265 (491)
..+++..++.+++.++++.++||++-.+|.+.+...+.+. |.... .+..-+..-.+. .+|... ....++.+|+
T Consensus 272 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~-G~~~~~~~~~GHgiG~~~He-~~~~~g~~~~~~~~~~l~ 349 (402)
T 1kp0_A 272 ASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZW-DLLRYRTFGYGHSFGVLBHY-YGREAGVELREDIZTVLE 349 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCGGGBCSCSCBBCEEEETT-EECCTTCBCCTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCeecCCCcccccCCcccc-CCcccCcccCCCCCCccC
Confidence 3567788888999999999999999999999988887765 54310 101001100010 111100 0011467899
Q ss_pred CCCeEEEEeceEeC
Q 011203 266 DGDMALLDMGAEYQ 279 (491)
Q Consensus 266 ~Gd~v~~D~g~~~~ 279 (491)
+|.++.++-|....
T Consensus 350 ~Gmv~tiEPgiy~~ 363 (402)
T 1kp0_A 350 PGMVVSMEPMVMBP 363 (402)
T ss_dssp TTCEEEECCEEEEC
T ss_pred CCcEEEECCceeec
Confidence 99999999888654
No 68
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=71.87 E-value=19 Score=36.17 Aligned_cols=97 Identities=16% Similarity=0.027 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc---CCCCC------CCcceEEeeCCCCcccccCCCCCCCCC
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---GGCRH------CSYTCICATGENSAVLHYGHAAAPNDR 262 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~---~g~~~------~~~~~iv~sG~~~~~~h~~~~~~p~~~ 262 (491)
.|++.+++.++.+++++.++||++-.||.+++...+.+. .|... ..|+.-+.-|..- -.|-. +...++
T Consensus 282 ~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iGl-~vhe~--~~~~~~ 358 (427)
T 3ig4_A 282 QKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLGL-DTHDV--GTYKDR 358 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCSS-SSSCC--CCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCCc-CCCcC--CCCCCC
Confidence 467778888899999999999999999998877766542 12110 0011001111111 12311 112578
Q ss_pred ccCCCCeEEEEeceEeC--ceEeeeeeEEee
Q 011203 263 TFEDGDMALLDMGAEYQ--FYGSDITCSFPV 291 (491)
Q Consensus 263 ~l~~Gd~v~~D~g~~~~--gY~sd~tRt~~v 291 (491)
+|++|-++.++-|.-+. |+..-+.-|++|
T Consensus 359 ~L~~GMV~tiEPgiy~~~~g~GvriEd~vlV 389 (427)
T 3ig4_A 359 VLEEGMVITIEPGLYIEEESIGIRIEDDILV 389 (427)
T ss_dssp BCCTTCEEEECCEEEEGGGTEEEECBEEEEE
T ss_pred EeCCCCEEEECCEEEECCCceEEEEeeEEEE
Confidence 99999999999987653 567778888888
No 69
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=71.64 E-value=25 Score=34.88 Aligned_cols=85 Identities=11% Similarity=0.027 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-CCcceEEeeCCCCcccccCCC------CCCCCCc
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-CSYTCICATGENSAVLHYGHA------AAPNDRT 263 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-~~~~~iv~sG~~~~~~h~~~~------~~p~~~~ 263 (491)
..+++..++.+++.++++.++||++-.+|.+++...+.+. |... ..+. +.-|... ..|.... ...++.+
T Consensus 272 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~-G~~~~~~~~--~GHgiG~-~~h~~~~~~g~~~~~~~~~~ 347 (401)
T 1chm_A 272 DHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKH-DVLQYRTFG--YGHSFGT-LSHYYGREAGLELREDIDTV 347 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHH-TCGGGBCSC--SCBBCSB-EETTEECCTTSBCCTTCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCcccCCC--CCcccCc-cCCccccccCccccCCCCCc
Confidence 3567788888999999999999999999998888777665 4321 1110 0001111 1121100 0114678
Q ss_pred cCCCCeEEEEeceEeC
Q 011203 264 FEDGDMALLDMGAEYQ 279 (491)
Q Consensus 264 l~~Gd~v~~D~g~~~~ 279 (491)
|++|.++.++-|....
T Consensus 348 L~~Gmv~tiEPgiy~~ 363 (401)
T 1chm_A 348 LEPGMVVSMEPMIMLP 363 (401)
T ss_dssp CCTTCEEEECCEEEEC
T ss_pred cCCCCEEEEcCeeeec
Confidence 9999999999887653
No 70
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=62.31 E-value=25 Score=36.11 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 334 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~ 334 (491)
..|++.+.+.+++.++++.++||++-.||...+...+
T Consensus 195 ~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~ 231 (494)
T 2iw2_A 195 VLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYC 231 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Confidence 3577788888899999999999999999999887765
No 71
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=54.43 E-value=18 Score=36.89 Aligned_cols=99 Identities=10% Similarity=-0.018 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCC---CCcccccC-CCCCCCCCccCC
Q 011203 191 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE---NSAVLHYG-HAAAPNDRTFED 266 (491)
Q Consensus 191 ~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~---~~~~~h~~-~~~~p~~~~l~~ 266 (491)
.++++..++.+++.++++.++||++-.||.+++...+.+. |..+..... =.-|- ...+.++. +....++.+|++
T Consensus 345 ~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~-~~~~~~~~G-HGIGl~HE~P~i~~~~~~~~~~~~~~L~~ 422 (470)
T 4b28_A 345 DMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKF-QKQKYGCLM-HGVGLCDEWPLVAYPDHAVAGAYDYPLEP 422 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHH-HTTCCSCSE-EEESSSEEEEEECCTTTCCTTSSCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHh-hhcCCCCcc-CCCCcCCCCCcccCccccccCCCCCEECC
Confidence 3577788888999999999999999999987755443321 111111000 01111 00111110 000114678999
Q ss_pred CCeEEEEeceEe--CceEeeeeeEEee
Q 011203 267 GDMALLDMGAEY--QFYGSDITCSFPV 291 (491)
Q Consensus 267 Gd~v~~D~g~~~--~gY~sd~tRt~~v 291 (491)
|-++.++-|... +.+..-+.-|++|
T Consensus 423 GMV~tiEPgiy~~~g~~GvriEd~vlV 449 (470)
T 4b28_A 423 GMTLCVEALISEEGGDFSIKLEDQVLI 449 (470)
T ss_dssp TCEEEEEEEEECTTCSCEEEEEEEEEE
T ss_pred CCEEEEcCeeecCCCcEEEEEeeEEEE
Confidence 999999997654 3577788888888
No 72
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=53.24 E-value=42 Score=33.94 Aligned_cols=35 Identities=3% Similarity=0.010 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 011203 193 QFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHT 227 (491)
Q Consensus 193 r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~ 227 (491)
++..+++.++.+++++.++||++-.||..++.+.+
T Consensus 272 ~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i 306 (451)
T 3rva_A 272 RDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGI 306 (451)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 46778888999999999999999999988766554
No 73
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=44.41 E-value=43 Score=34.52 Aligned_cols=36 Identities=6% Similarity=-0.030 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 011203 192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHT 227 (491)
Q Consensus 192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~ 227 (491)
.++..+++.++.+++++.++||++-.||..++.+.+
T Consensus 268 ~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i 303 (517)
T 3l24_A 268 FAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRV 303 (517)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 456778888999999999999999999998766554
No 74
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=21.28 E-value=68 Score=27.88 Aligned_cols=18 Identities=22% Similarity=0.154 Sum_probs=15.7
Q ss_pred CCccCCCCEEEECCcccc
Q 011203 397 VRELQERMVITVEPGCYF 414 (491)
Q Consensus 397 ~~~L~~Gmv~~iepg~y~ 414 (491)
..+|+||..++|.||.+-
T Consensus 120 ~i~L~pGesvtIppg~~H 137 (175)
T 2y0o_A 120 EIELEPGGQYTIPPNTKH 137 (175)
T ss_dssp EEEECTTCEEEECTTCCE
T ss_pred EEEECCCCEEEECCCCcE
Confidence 458999999999999875
No 75
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=20.19 E-value=2.4e+02 Score=21.91 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 011203 298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKI 333 (491)
Q Consensus 298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~ 333 (491)
+|.++.+.+.....+++-.-|.|++..++....+..
T Consensus 4 ~~~~~l~~vkk~irslLiS~K~gvtl~~L~~dYr~~ 39 (102)
T 3s93_A 4 EQERIQECLRKEIRSLLISTKDGLSPQELEKEYLLM 39 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSCBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhheeCCCCcCHHHHHHHHHHH
Confidence 567888889999999999999999999998777654
Done!