Query         011203
Match_columns 491
No_of_seqs    211 out of 2298
Neff          8.4 
Searched_HMMs 13730
Date          Mon Mar 25 03:17:50 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011203.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/011203hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1pv9a2 d.127.1.1 (A:125-345)  100.0 6.4E-50 4.6E-54  377.3  26.1  221  184-467     1-221 (221)
  2 d2v3za2 d.127.1.1 (A:177-440)  100.0 4.1E-49   3E-53  381.8  31.7  259  185-478     1-260 (264)
  3 d1chma2 d.127.1.1 (A:157-402)  100.0 1.2E-47 8.7E-52  367.6  26.6  237  182-471     1-242 (246)
  4 d1o0xa_ d.127.1.1 (A:) Methion 100.0 6.5E-47 4.7E-51  363.0  24.3  243  180-464     1-248 (249)
  5 d1qxya_ d.127.1.1 (A:) Methion 100.0 7.6E-45 5.5E-49  348.6  23.4  242  182-465     2-249 (249)
  6 d2gg2a1 d.127.1.1 (A:3-264) Me 100.0   4E-44 2.9E-48  346.2  25.3  246  182-468     2-252 (262)
  7 d1xgsa2 d.127.1.1 (A:1-194,A:2 100.0   4E-43 2.9E-47  329.9  24.3  216  188-464     2-218 (218)
  8 d1b6aa2 d.127.1.1 (A:110-374,A 100.0 3.4E-38 2.5E-42  309.6  21.6  239  181-465    49-292 (295)
  9 d2v3za1 c.55.2.1 (A:1-176) Ami  99.8 1.2E-21   9E-26  176.1   9.1  162   11-184     2-176 (176)
 10 d1chma1 c.55.2.1 (A:2-156) Cre  98.9 2.5E-10 1.8E-14   98.9   2.4  133    8-181    14-155 (155)
 11 d1kp0a1 c.55.2.1 (A:1-156) Cre  98.8 4.1E-10   3E-14   97.5   2.2  134    8-182    15-156 (156)
 12 d1pv9a1 c.55.2.1 (A:8-124) Ami  98.2 1.6E-07 1.2E-11   76.6   1.3   96   64-183    17-117 (117)
 13 d1xgsa2 d.127.1.1 (A:1-194,A:2  94.2   0.084 6.1E-06   46.1   9.1   39  297-335     4-42  (218)
 14 d1b6aa2 d.127.1.1 (A:110-374,A  93.7   0.059 4.3E-06   49.6   7.4   87  299-414    60-147 (295)
 15 d1pv9a2 d.127.1.1 (A:125-345)   91.5     1.1 7.7E-05   38.5  12.5   97  192-291   110-208 (221)
 16 d2gg2a1 d.127.1.1 (A:3-264) Me  91.0    0.94 6.8E-05   40.0  11.8   84  192-278   120-207 (262)
 17 d2v3za2 d.127.1.1 (A:177-440)   90.1    0.54 3.9E-05   41.8   9.3   38  298-335     7-44  (264)
 18 d1qxya_ d.127.1.1 (A:) Methion  88.8    0.71 5.2E-05   40.5   9.0   39  298-336    11-49  (249)
 19 d1chma2 d.127.1.1 (A:157-402)   86.9     2.6 0.00019   36.4  11.6   97  193-291   119-225 (246)
 20 d1o0xa_ d.127.1.1 (A:) Methion  83.0     3.9 0.00029   35.2  10.8   81  193-278   121-207 (249)
 21 d1l1pa_ d.26.1.1 (A:) Trigger   23.4      16  0.0012   26.9   1.8   22  259-280    10-31  (106)
 22 d1t11a3 d.26.1.1 (A:135-247) T  20.9      23  0.0017   26.3   2.3   21  260-280    20-40  (113)
 23 d1gs0a1 a.41.1.1 (A:207-340) D  20.6      58  0.0042   24.9   4.8   40  290-334    36-76  (134)

No 1  
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00  E-value=6.4e-50  Score=377.34  Aligned_cols=221  Identities=34%  Similarity=0.531  Sum_probs=202.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCc
Q 011203          184 KSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRT  263 (491)
Q Consensus       184 Ks~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~  263 (491)
                      ||++||++||+|++++++++..+++.++||+||.||.+.+...+.++ |+...+|.+++.+|.|+..+|+.+    ++++
T Consensus         1 Ks~~EI~~mr~a~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~-G~~~~~~~~~v~~g~~~~~~h~~~----~~~~   75 (221)
T d1pv9a2           1 KTKEEIEIIEKACEIADKAVMAAIEEITEGKREREVAAKVEYLMKMN-GAEKPAFDTIIASGHRSALPHGVA----SDKR   75 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGGGGGSTTCBC----CSCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHhc-cccccccccccccccccccccccc----cccc
Confidence            89999999999999999999999999999999999999999888876 767778889999999999999654    8999


Q ss_pred             cCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011203          264 FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV  343 (491)
Q Consensus       264 l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~  343 (491)
                      +++||+|++|+|+.++||++|++|||++ |+++++|+++|+.++++++++++++|||++++||+++++++++    +.|+
T Consensus        76 i~~gd~v~id~~~~~~gy~~d~~Rt~~v-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~----~~g~  150 (221)
T d1pv9a2          76 IERGDLVVIDLGALYNHYNSDITRTIVV-GSPNEKQREIYEIVLEAQKRAVEAAKPGMTAKELDSIAREIIK----EYGY  150 (221)
T ss_dssp             CCTTCEEEEEECEEETTEECCEEEEEES-SSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH----HTTC
T ss_pred             ccccceEEEecccccCccccCcceeeec-CCccHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHhhhh----hccc
Confidence            9999999999999999999999999999 9999999999999999999999999999999999999998864    4565


Q ss_pred             ccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccccccccccc
Q 011203          344 MVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAM  423 (491)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~  423 (491)
                      .              .++.|++||++|+++||.|.+.             ..++.+|+|||||+|||++|.         
T Consensus       151 ~--------------~~~~~~~Ghg~g~~~~e~~~~~-------------~~~~~~L~~gMv~~iep~~~~---------  194 (221)
T d1pv9a2         151 G--------------DYFIHSLGHGVGLEIHEWPRIS-------------QYDETVLKEGMVITIEPGIYI---------  194 (221)
T ss_dssp             G--------------GGCCSCSEEECSSSSSEEEEES-------------TTCCCBCCTTCEEEECCEEEE---------
T ss_pred             C--------------CceeccccCCCCcccchhcccc-------------cCCCceeCCCcEEEECCEEEE---------
Confidence            1              4688999999999999965322             245789999999999999997         


Q ss_pred             cccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCC
Q 011203          424 ENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPR  467 (491)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~  467 (491)
                                       ++.+|+|+||+|+||++|+|+||+.||
T Consensus       195 -----------------~~~~g~r~Ed~v~Vte~G~e~Lt~~pr  221 (221)
T d1pv9a2         195 -----------------PKLGGVRIEDTVLITENGAKRLTKTER  221 (221)
T ss_dssp             -----------------TTTEEEECBEEEEECSSSEEESCCSCC
T ss_pred             -----------------CCCCEEEEeEEEEECCCcceECCCCCC
Confidence                             567899999999999999999999997


No 2  
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=4.1e-49  Score=381.84  Aligned_cols=259  Identities=39%  Similarity=0.676  Sum_probs=228.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCcc
Q 011203          185 SDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTF  264 (491)
Q Consensus       185 s~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l  264 (491)
                      ||+||++||+|+++++++++++.+.++||+||.||++.+...+.++ |+..++|.+++.+|.|+..+|+.    +++++|
T Consensus         1 Sp~EI~~~r~A~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~-G~~~~~~~~~~~~g~~~~~~h~~----~~~~~l   75 (264)
T d2v3za2           1 SPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRH-GARYPSYNTIVGSGENGCILHYT----ENECEM   75 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCCEESSCCEEEEGGGGGSTTCC----CCCSBC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCCccccccccCCCCccccccc----cCcccc
Confidence            7999999999999999999999999999999999999999888876 77778999999999999999954    489999


Q ss_pred             CCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCc
Q 011203          265 EDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVM  344 (491)
Q Consensus       265 ~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~  344 (491)
                      ++||+|++|+|+.|+||++|++|||+++|+++++|+++|+++.++++++++++|||++++||+.++.+.+++.+.+.|+.
T Consensus        76 ~~gd~v~vd~g~~~~gY~~d~~Rt~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~~~~~~~~  155 (264)
T d2v3za2          76 RDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL  155 (264)
T ss_dssp             CTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ccccceeEEeeeccCCeeccceEEEEECCcCcHHHHHHHHhHHHHHHHHHhhhccccchhhHHHHHHHHHHHhhhhhCCc
Confidence            99999999999999999999999999888999999999999999999999999999999999999999999988888877


Q ss_pred             cCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccccc
Q 011203          345 VGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAME  424 (491)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~  424 (491)
                      ..........+....++.|++||++|.+.|+.|.+.             ..++.+|+|||||++||++|+..        
T Consensus       156 ~~~~~~~~~~~~~~~~~~~g~G~~~~~~~~e~p~~~-------------~~~~~~L~~gMv~~iEP~i~~~~--------  214 (264)
T d2v3za2         156 KGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYG-------------QDRSRILEPGMVLTVAPGLYIAP--------  214 (264)
T ss_dssp             CSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCC-------------GGGCCCCCTTCEEEECCEEEECT--------
T ss_pred             ccchhhhhcccccCCceeeCCCCccccCcccccccc-------------cccccccCCCcEEeecCCEEecC--------
Confidence            655544444555667899999999999999866432             34567899999999999999853        


Q ss_pred             ccccccccccchhcccCCcceeEEceEEEEeCCCeeeCC-CCCCCHHHHHHHHhC
Q 011203          425 NESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIMAG  478 (491)
Q Consensus       425 ~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT-~~p~~~~~ie~~~~~  478 (491)
                              +|.+++.+.++ |+|+||||+||+||+|+|| ..|+++++||+||..
T Consensus       215 --------~~~~~~~~~~~-Gvr~EdtvlVTedG~E~LT~~~p~~~~~ie~l~~~  260 (264)
T d2v3za2         215 --------DAEVPEQYRGI-GIRIEDDIVITETGNENLTASVVKKPEEIEALMVA  260 (264)
T ss_dssp             --------TCSSCGGGTTE-EEECBEEEEEETTEEEESSTTSCCSHHHHHHHHHH
T ss_pred             --------CceeeecCCee-EEEEeeEEEECCCCCeeCCCCCCCCHHHHHHHHHh
Confidence                    23333333444 9999999999999999999 599999999999954


No 3  
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]}
Probab=100.00  E-value=1.2e-47  Score=367.59  Aligned_cols=237  Identities=20%  Similarity=0.230  Sum_probs=205.4

Q ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC-----CCCCCcceEEeeCCCCcccccCCC
Q 011203          182 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGG-----CRHCSYTCICATGENSAVLHYGHA  256 (491)
Q Consensus       182 ~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g-----~~~~~~~~iv~sG~~~~~~h~~~~  256 (491)
                      +|||++||++||+|+++++++++++++.++||+||.||++++.+.+.+.++     .....+.+++.+|.++..+|+.  
T Consensus         1 ~IKs~~Ei~~iR~a~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~h~~--   78 (246)
T d1chma2           1 MIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGINTDGAHNP--   78 (246)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCEEEEEEGGGGGSTTCC--
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCcccCccccccccccccccCcccccccc--
Confidence            589999999999999999999999999999999999999999888876521     1245777899999999999964  


Q ss_pred             CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203          257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE  336 (491)
Q Consensus       257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~  336 (491)
                        |+++++++||+|++|+|+.|+||++|++|||++ |+|+++|+++|+.++++++++++++|||++++||++++.++++ 
T Consensus        79 --~~~~~~~~gd~v~~d~g~~~~gY~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~a~~~~~~-  154 (246)
T d1chma2          79 --VTTRKVNKGDILSLNCFPMIAGYYTALERTLFL-DHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFL-  154 (246)
T ss_dssp             --EESCBCCTTCEEEEEEECEETTEECCEEEEEEE-SCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH-
T ss_pred             --CCCccccCCCEEEEeecccccccccceeecccc-ccchhhHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhhhHH-
Confidence              489999999999999999999999999999999 9999999999999999999999999999999999999999875 


Q ss_pred             HHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccc
Q 011203          337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID  416 (491)
Q Consensus       337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~  416 (491)
                         +.|+             . .++.|++||++|+..|+.|...        +......++.+|+|||||+||||+|..+
T Consensus       155 ---~~g~-------------~-~~~~~~~ghg~G~~~~~~~~~~--------~~~~~~~~~~~L~~GMv~~iEp~i~~~~  209 (246)
T d1chma2         155 ---KHDV-------------L-QYRTFGYGHSFGTLSHYYGREA--------GLELREDIDTVLEPGMVVSMEPMIMLPE  209 (246)
T ss_dssp             ---HHTC-------------G-GGBCSCSCBBCSBEETTEECCT--------TSBCCTTCCCBCCTTCEEEECCEEEECT
T ss_pred             ---hhcc-------------c-cccccccccccCcccccccccc--------cccccCCCceecCCCCEEEEcCeEEccC
Confidence               4555             2 4677889999999888754221        1112335678999999999999999743


Q ss_pred             ccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCCHHH
Q 011203          417 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISD  471 (491)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~~~~  471 (491)
                                            .++|.||+|+||+|+||++|+|+||..|+.++.
T Consensus       210 ----------------------~~~g~gG~r~Ed~v~Vte~G~e~LT~~P~~~~~  242 (246)
T d1chma2         210 ----------------------GLPGAGGYREHDILIVNENGAENITKFPYGPEK  242 (246)
T ss_dssp             ----------------------TSTTCEEEECBEEEEEETTEEEECCCSCCSHHH
T ss_pred             ----------------------CCCcccEEEEEEEEEECCCccEECCCCCCChhh
Confidence                                  126788999999999999999999999998753


No 4  
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00  E-value=6.5e-47  Score=362.97  Aligned_cols=243  Identities=20%  Similarity=0.256  Sum_probs=197.4

Q ss_pred             hHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCcceEEeeCCCCcccccC
Q 011203          180 CRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICATGENSAVLHYG  254 (491)
Q Consensus       180 lR~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-----~~~~~iv~sG~~~~~~h~~  254 (491)
                      ||.|||++||++||+|+++++++++.+.+.++||+||.||++.+...+.+. |...     .+++..+..+.+....|+.
T Consensus         1 m~~IKs~~Ei~~mr~A~~ia~~~~~~~~~~i~~G~te~ev~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (249)
T d1o0xa_           1 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKL-RVKPAFKGYGGYKYATCVSVNEEVVHGL   79 (249)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHH-TCEESSTTGGGCCCSEEEEETTBCSCCC
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHh-hhhhhccccccccccccccCccccccee
Confidence            589999999999999999999999999999999999999999988888775 4321     1223334444566666754


Q ss_pred             CCCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203          255 HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII  334 (491)
Q Consensus       255 ~~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~  334 (491)
                      .   ++++.+++||+|++|+|+.++||++|++||+++ |+++++|+++|++++++++++++.+|||++++||++++++++
T Consensus        80 ~---~~~~~~~~gd~v~id~g~~~~gy~~D~~RT~~~-G~~s~~~~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~  155 (249)
T d1o0xa_          80 P---LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIV-GETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETV  155 (249)
T ss_dssp             C---CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEES-SCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHH
T ss_pred             e---ccccccccccceeeecceeecceecccccceee-cCcChhhHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            3   478899999999999999999999999999999 999999999999999999999999999999999999999987


Q ss_pred             HHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203          335 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF  414 (491)
Q Consensus       335 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~  414 (491)
                      .    +.|+               .++.|++||+||+.+||.|.++         .+....++.+|+|||||++||++|+
T Consensus       156 ~----~~g~---------------~~~~~~~GHgiG~~~~~~p~~~---------~~~~~~~~~~le~gMv~~iEp~~~~  207 (249)
T d1o0xa_         156 E----SVGF---------------NVIRDYVGHGVGRELHEDPQIP---------NYGTPGTGVVLRKGMTLAIEPMVSE  207 (249)
T ss_dssp             H----HTTC---------------EECCSSCEEECSSSSSEEEEEC---------SCCCTTCSCBCCTTCEEEECCEEES
T ss_pred             H----hcCC---------------eeecCCcccccccCCCcCCccc---------eeccCCCCccccCCeEEEecceeec
Confidence            4    4565               3567999999999999865332         1223456789999999999999997


Q ss_pred             ccccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203          415 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS  464 (491)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~  464 (491)
                      .......+...        |.++ ..+|.+|+|+||+|+||++|+|+||+
T Consensus       208 ~~~~~~~~e~~--------~~~~-~~~g~~g~r~Ed~v~VTe~G~e~LTk  248 (249)
T d1o0xa_         208 GDWRVVVKEDG--------WTAV-TVDGSRCAHFEHTILITENGAEILTK  248 (249)
T ss_dssp             SCCCEEECTTS--------SCEE-ETTCCCEEECBEEEEECSSSEEESSC
T ss_pred             CCCceEEccCC--------cEEE-eeCCcceEEeceEEEEcCCcCeeCCC
Confidence            54322222111        1111 12567799999999999999999995


No 5  
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00  E-value=7.6e-45  Score=348.62  Aligned_cols=242  Identities=19%  Similarity=0.219  Sum_probs=198.6

Q ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCcceEEeeCCCCcccccCCC
Q 011203          182 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA  256 (491)
Q Consensus       182 ~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~-----~~~~~~iv~sG~~~~~~h~~~~  256 (491)
                      +|||++||++||+|++|++++++.+++.++||+||.||++.+.+.+.+. ++.     ..+|++++++|.|+..+|+.+ 
T Consensus         2 ~IKs~~Ei~~~R~A~~i~~~~~~~~~~~i~~G~se~ei~~~~~~~~~~~-~a~~~~~~~~~~~~~~~~g~~~~~~h~~~-   79 (249)
T d1qxya_           2 IVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEY-GAISAPIHDENFPGQTCISVNEEVAHGIP-   79 (249)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHH-TCEEHHHHHHCCSSSSEEEETTEEECCCC-
T ss_pred             EeCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHh-hhhhccccccccccccccccccccccccc-
Confidence            6999999999999999999999999999999999999999988888775 443     356778899999999999654 


Q ss_pred             CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCC-CHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203          257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKF-TSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL  335 (491)
Q Consensus       257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~-~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~  335 (491)
                         ++++|++||+|++|+|+.|+||++|++|||++ |++ ++.++++|+.+.++++++++++|||++++++++++++++.
T Consensus        80 ---~~~~l~~Gd~v~id~g~~~~gY~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~  155 (249)
T d1qxya_          80 ---SKRVIREGDLVNIDVSALKNGYYADTGISFVV-GESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTAR  155 (249)
T ss_dssp             ---CSCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHH
T ss_pred             ---CCceecCCCceEEeeeeEECCEeccccccccc-CCCcchhhhHHHHHHHHHhhhhHhhccCCceeehhhhhhhhhhc
Confidence               89999999999999999999999999999999 665 5578889999999999999999999999999999988753


Q ss_pred             HHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccc
Q 011203          336 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI  415 (491)
Q Consensus       336 ~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~  415 (491)
                      +    .+.               .++.|.+||++|+..|+.|...        +.+....++.+|+|||||+|||++|..
T Consensus       156 ~----~~~---------------~~~~~~~gh~~G~~~~~~p~~~--------~~~~~~~~~~~Le~GMV~~iEP~i~~~  208 (249)
T d1qxya_         156 Q----NDL---------------KVIKNLTGHGVGLSLHEAPAHV--------LNYFDPKDKTLLTEGMVLAIEPFISSN  208 (249)
T ss_dssp             H----TTC---------------EECTTCCEEECSSSSSEEEEEE--------CSSCCTTCCCBCCTTBEEEECCEEESS
T ss_pred             c----ccc---------------eeeecccccccccccccCCccc--------cccccccCCccccCCceEEEeeeEecC
Confidence            2    222               4678999999999999865321        112234567899999999999999974


Q ss_pred             cccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCC
Q 011203          416 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSV  465 (491)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~  465 (491)
                      ......+. |       .|.+...+ +-+|+|+||||+||+||+|+||++
T Consensus       209 ~~~~~~~~-~-------~~~~~~~~-~~~g~r~EdtvlVTe~G~e~LT~~  249 (249)
T d1qxya_         209 ASFVTEGK-N-------EWAFETSD-KSFVAQIEHTVIVTKDGPILTTKI  249 (249)
T ss_dssp             CSSCEECS-S-------SSCEECTT-CCCEEEEEEEEECCTTCCEETTCC
T ss_pred             CcceeecC-C-------CceEEecC-CCeEEEEeeEEEEcCCccEeCCCC
Confidence            32111111 1       12222222 335999999999999999999974


No 6  
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=4e-44  Score=346.24  Aligned_cols=246  Identities=17%  Similarity=0.153  Sum_probs=199.9

Q ss_pred             hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-----CCCCcceEEeeCCCCcccccCCC
Q 011203          182 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC-----RHCSYTCICATGENSAVLHYGHA  256 (491)
Q Consensus       182 ~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~-----~~~~~~~iv~sG~~~~~~h~~~~  256 (491)
                      +|||++||++||+|+++++++++.+++.++||+||.||++.+...++++++.     ...+|++++.+|.+.+.+|+.+ 
T Consensus         2 ~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   80 (262)
T d2gg2a1           2 SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIP-   80 (262)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEEECCCC-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHhCCCccccccccCCCceeecccCceeecCCC-
Confidence            5999999999999999999999999999999999999999988888876543     2345667778888888888654 


Q ss_pred             CCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203          257 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE  336 (491)
Q Consensus       257 ~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~  336 (491)
                        .++++|++||+|++|+|+.|+||++|++||+++ |+++++|+++|++++++++++++++|||++++||+.++++++. 
T Consensus        81 --~~~~~l~~Gd~v~id~g~~~~gY~~d~~Rt~~~-G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~a~~~~~~-  156 (262)
T d2gg2a1          81 --DDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIV-GKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVE-  156 (262)
T ss_dssp             --CTTCBCCTTCEEEEEEEEEETTEEEEEEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHH-
T ss_pred             --CCCeeccCCCEEEEEeeEEECCEEEEEEeeeec-ccccccchhHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHH-
Confidence              245789999999999999999999999999987 9999999999999999999999999999999999999998864 


Q ss_pred             HHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccc
Q 011203          337 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID  416 (491)
Q Consensus       337 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~  416 (491)
                         +.|+               ..+.|.+||++|...|+.|...         .......+.+|+|||||+|||++|+..
T Consensus       157 ---~~g~---------------~~~~~~~g~g~g~~~~~~p~~~---------~~~~~~~~~~L~~gmv~~iEp~~~~~~  209 (262)
T d2gg2a1         157 ---AEGF---------------SVVREYCGHGIGRGFHEEPQVL---------HYDSRETNVVLKPGMTFTIEPMVNAGK  209 (262)
T ss_dssp             ---HTTC---------------EECSSCCEEECSSSSSEEEEEC---------SSCCTTCCCBCCTTCEEEECCEEESSC
T ss_pred             ---HcCC---------------CcccccccCCCCCCCCCCCccc---------cccccccceEecCCeEEEeccccccCC
Confidence               4665               2456779999999988755322         111234578999999999999999754


Q ss_pred             ccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCCCCC
Q 011203          417 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPRE  468 (491)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~p~~  468 (491)
                      ..+..+. |.+       -+.. .++.+|+|+||||+||++|+|+||..|.+
T Consensus       210 ~~~~~~~-d~~-------~v~~-~~~~~g~r~Ed~vlVTe~G~e~LT~~~~~  252 (262)
T d2gg2a1         210 KEIRTMK-DGW-------TVKT-KDRSLSAQYEHTIVVTDNGCEILTLRKDD  252 (262)
T ss_dssp             SCEEECT-TSS-------CEEE-TTCCCEEECBEEEEEETTEEEESSCCTTC
T ss_pred             CceEEcC-CCC-------eEEe-ecCCcEEEEeeEEEECCCcCEeCCCCCcc
Confidence            3221111 111       1111 13446999999999999999999965553


No 7  
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00  E-value=4e-43  Score=329.92  Aligned_cols=216  Identities=19%  Similarity=0.183  Sum_probs=179.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcccccCCCCCCCCCccCCC
Q 011203          188 ELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDG  267 (491)
Q Consensus       188 EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~G  267 (491)
                      ||+.||+|++|++++++++++.++||+||.||++.+...+.++ |+ .++|++++++|.+.+..|+   ..+++++|++|
T Consensus         2 EIe~~r~A~~ia~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~-~~~~~~~~~~~~~~~~~~~---~~~~~r~l~~G   76 (218)
T d1xgsa2           2 DTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMEL-GG-KPAFPVNLSINEIAAHYTP---YKGDTTVLKEG   76 (218)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TC-EESSCCEEEETTEEECCCC---CTTCCCBCCTT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHh-hc-ccccceeeccccccccccc---ccCCCeeeecC
Confidence            8999999999999999999999999999999999999998876 54 3678888888877654442   23468899999


Q ss_pred             CeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCC
Q 011203          268 DMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGN  347 (491)
Q Consensus       268 d~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~  347 (491)
                      |+|++|+|+.|+||++|++|||++ |++   ++++|+++.++++++++.+|||++++||+++++++++    +.|+    
T Consensus        77 d~v~iD~g~~~~gY~aD~~Rt~~~-~~~---~~~~~~~~~~~~~~~~~~~kpG~~~~~i~~~~~~~~~----~~g~----  144 (218)
T d1xgsa2          77 DYLKIDVGVHIDGFIADTAVTVRV-GME---EDELMEAAKEALNAAISVARAGVEIKELGKAIENEIR----KRGF----  144 (218)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEET-TSC---CCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHH----TTTC----
T ss_pred             CeeEeeeccccccccccccceEee-chh---hhhhhhhhhHHHHHHHHhhhcCCchhhccchHHHHHH----HhCC----
Confidence            999999999999999999999987 654   4467899999999999999999999999999998864    4564    


Q ss_pred             hHHHHHhhcccccCccccccccC-CcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccccccccccccccc
Q 011203          348 VDEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENE  426 (491)
Q Consensus       348 ~~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~~~~~~~~~~~~  426 (491)
                                 ..+.|.+||+|| +..|+.|.+         |.+....++.+|+|||||+|||++|...          
T Consensus       145 -----------~~~~~~~GHgiG~~~~~~~~~~---------~~~~~~~~~~~le~GmV~tiEP~i~~~~----------  194 (218)
T d1xgsa2         145 -----------KPIVNLSGHKIERYKLHAGISI---------PNIYRPHDNYVLKEGDVFAIEPFATIGA----------  194 (218)
T ss_dssp             -----------EECTTCCEEECBTTBSSCSCEE---------CSSCCTTCCCBCCTTCEEEECCEEESSC----------
T ss_pred             -----------ccccccccccccCcccccCccc---------ccccccCCccEecCCCEEEECCEEEeCC----------
Confidence                       356789999999 555654422         2233455678999999999999999732          


Q ss_pred             ccccccccchhcccCCcceeEEceEEEEeCCCeeeCCC
Q 011203          427 STSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS  464 (491)
Q Consensus       427 ~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~  464 (491)
                                   ..| .++|+||||+||++|+|+||+
T Consensus       195 -------------~~g-~~~r~Ed~v~Vt~~G~e~LT~  218 (218)
T d1xgsa2         195 -------------RNG-IVAQFEHTIIVEKDSVIVTTE  218 (218)
T ss_dssp             -------------TCC-CEEECBEEEEECSSSEEETTC
T ss_pred             -------------CCe-EEEEEeeEEEEcCCceEECCC
Confidence                         012 266999999999999999995


No 8  
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.4e-38  Score=309.64  Aligned_cols=239  Identities=14%  Similarity=0.097  Sum_probs=184.6

Q ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-----CCcceEEeeCCCCcccccCC
Q 011203          181 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-----CSYTCICATGENSAVLHYGH  255 (491)
Q Consensus       181 R~vKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-----~~~~~iv~sG~~~~~~h~~~  255 (491)
                      +-+|+++||+.||+|++|++++++++.+.++||+||.||++.+...+++. |...     .+|++  .++.|...+||.+
T Consensus        49 ~~~~~~~ei~~mR~Aa~Ia~~~~~~~~~~i~pG~te~el~~~~e~~~~~~-g~~~~~~~~~afp~--~~~~n~~~~H~~p  125 (295)
T d1b6aa2          49 LDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKL-IKENGLNAGLAFPT--GCSLNNCAAHYTP  125 (295)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHH-HTCBTTTEEEEEEE--EEEETTEEECCCC
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHh-ccccCcccccCCcc--cccccceeccccc
Confidence            34599999999999999999999999999999999999999998888765 4332     23433  3346888899875


Q ss_pred             CCCCCCCccCCCCeEEEEeceEeCceEeeeeeEEeeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203          256 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL  335 (491)
Q Consensus       256 ~~~p~~~~l~~Gd~v~~D~g~~~~gY~sd~tRt~~v~G~~~~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~  335 (491)
                       ..+++++|++||+|++|+|+.|+||++|++|||++ |   +.+.++++++++++++++++++||+++.+++.++.++++
T Consensus       126 -~~~~~~~l~~GD~v~iD~g~~~~gY~sD~trT~~~-g---~~~~~~~~~~~~~~~~a~~~~~~g~~~~~i~~~~~~~~~  200 (295)
T d1b6aa2         126 -NAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTF-N---PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVME  200 (295)
T ss_dssp             -CTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECS-S---GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred             -ccccchhccCCcceEEEeeeccccccccceeeeee-c---cchhHHHHHHHHHhhhhhhcccccccccchHHHHHHHHH
Confidence             44578999999999999999999999999999987 5   455677888999999999999999999999999998864


Q ss_pred             HHHHhCCCccCChHHHHHhhcccccCccccccccCCcccCCCCCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCccccc
Q 011203          336 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI  415 (491)
Q Consensus       336 ~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~~  415 (491)
                      +    .+...      ...++....+.+.+||++|..+|+.+...        + ......+.+|+|||||||||+++..
T Consensus       201 ~----~~~~~------~~~~~~~~~~~~~~gHgiG~~~~~~~~~~--------~-~~~~~~~~~Le~GmV~tIEP~i~~g  261 (295)
T d1b6aa2         201 S----YEVEI------DGKTYQVKPIRNLNGHSIGQYRIHAGKTV--------P-IVKGGEATRMEEGEVYAIETFGSTG  261 (295)
T ss_dssp             T----CEEEE------TTEEEECEECTTCEEEEEBTTBSCCSCEE--------E-SSSSCCCCBCCTTCEEEEEEEEESS
T ss_pred             h----hhhhh------hhccCcccceeccccccCccccccccccc--------c-cccCCCCCEeCCCCEEEEeCeeeCC
Confidence            3    22110      01223333344457999999888754221        1 1123456789999999999988742


Q ss_pred             cccccccccccccccccccchhcccCCcceeEEceEEEEeCCCeeeCCCC
Q 011203          416 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSV  465 (491)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~ggvried~v~Vte~G~e~LT~~  465 (491)
                      .                  ..+. .+|.+++|+||||+||++|+|+||+.
T Consensus       262 ~------------------g~v~-~~g~~~~~~E~tvlVt~~G~EvLT~~  292 (295)
T d1b6aa2         262 K------------------GVVD-IKGSYTAQFEHTILLRPTCKEVVSRG  292 (295)
T ss_dssp             C------------------SCCC-STTCCEEEEEEEEEECSSCEEETTCC
T ss_pred             C------------------eEEc-cCCcEEEEeceEEEECCCcCeECCCC
Confidence            1                  1111 14556999999999999999999964


No 9  
>d2v3za1 c.55.2.1 (A:1-176) Aminopeptidase P {Escherichia coli [TaxId: 562]}
Probab=99.84  E-value=1.2e-21  Score=176.06  Aligned_cols=162  Identities=20%  Similarity=0.278  Sum_probs=129.0

Q ss_pred             CCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCCEEEEEEeCCC--
Q 011203           11 KVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATG--   88 (491)
Q Consensus        11 ~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~~~lvi~~~~g--   88 (491)
                      .+++++|++||++|.++|++         ++++|+.|++..+++ .|..|+|||++||+||||+.+|++++|+.+.++  
T Consensus         2 ~i~~~ey~~RR~~l~~~l~~---------~sv~il~~~~~~~r~-~D~~y~FrQ~s~F~YLTG~~ep~~vlvl~~~~~~~   71 (176)
T d2v3za1           2 EISRQEFQRRRQALVEQMQP---------GSAALIFAAPEVTRS-ADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTH   71 (176)
T ss_dssp             CCCHHHHHHHHHHHHHHSCS---------SEEEEEECCCCCEEE-TTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSC
T ss_pred             CCCHHHHHHHHHHHHHhCCC---------CCEEEEECCCeeecc-CCCCCCccccCccceecccCCCCceEEEEecCCCC
Confidence            58999999999999999986         578999999988875 799999999999999999999999988877544  


Q ss_pred             -eeEEeecCCCCccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCC--CCccccc
Q 011203           89 -KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNF--SKPAQFE  165 (491)
Q Consensus        89 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~--~~~~~~~  165 (491)
                       +.+||+++.+...+.|.|.+.+.+++.+.+++|.+.+.+++...|.+++.  +...|+...+........  .+...+.
T Consensus        72 ~~~~Lf~~~~d~~~e~W~G~~~~~e~a~~~~gid~~~~~~~~~~~L~~ll~--~~~~iy~~~~~~~~~~~~~~~~~~~~~  149 (176)
T d2v3za1          72 NHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN--GLDVVYHAQGEYAYADVIVNSALEKLR  149 (176)
T ss_dssp             EEEEEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHT--TCSEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             cEEEEEEcCCCcccceeCCccccchhhhhhcccceEEehHHHhhhHHHHHh--cCCeEEecccCcHHHHHHHHHHHHHHH
Confidence             47899999999899999999999999999999999999999999988764  456776543322110000  0000000


Q ss_pred             --------ccccccchHHHHHHhHhcC
Q 011203          166 --------FETELNTLHPILSECRVFK  184 (491)
Q Consensus       166 --------~~~~~~~~~~~i~~lR~vK  184 (491)
                              ....+.++.++|.+||+||
T Consensus       150 ~~~r~~~~~~~~i~~l~~il~elRlIK  176 (176)
T d2v3za1         150 KGSRQNLTAPATMIDWRPVVHEMRLFK  176 (176)
T ss_dssp             TCGGGTCCCCSEEECCHHHHHHHHHSC
T ss_pred             HhhhccCCCcccccChHHHHHHhcCCC
Confidence                    1244678999999999998


No 10 
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]}
Probab=98.87  E-value=2.5e-10  Score=98.89  Aligned_cols=133  Identities=8%  Similarity=0.028  Sum_probs=76.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCC---CEEEEEE
Q 011203            8 SPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREP---GFYGAID   84 (491)
Q Consensus         8 ~~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~---~~~lvi~   84 (491)
                      ..++||.+||++|+++|++.|+++    ++  |+++|.                  ..+|++|||||...   ...++++
T Consensus        14 ~~~~fs~~E~~~Rl~klr~~m~~~----gi--Dalli~------------------~~~ni~YlTGf~~~~~~r~~~l~i   69 (155)
T d1chma1          14 VRSTFSAQEYANRQARLRAHLAAE----NI--DAAIFT------------------SYHNINYYSDFLYCSFGRPYALVV   69 (155)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHT----TC--SEEEEC------------------SHHHHHHHHSCCCCCTTCCCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHc----CC--CEEEEe------------------ccccceeecCccccCccCceEEEe
Confidence            457899999999999999999985    78  665543                  33579999998632   1233454


Q ss_pred             eCCCeeEEeecCCCCc---cccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCc
Q 011203           85 IATGKSILFAPRLPPD---YAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKP  161 (491)
Q Consensus        85 ~~~g~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~  161 (491)
                      +.+|.+.+ ++..+..   ...|......+..+          ....+.+.+.+...  ..++||+    +.+..+....
T Consensus        70 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~--~~~~IGi----e~~~~~~~~~  132 (155)
T d1chma1          70 TEDDVISI-SANIDGGQPWRRTVGTDNIVYTDW----------QRDNYFAAIQQALP--KARRIGI----EHDHLNLQNR  132 (155)
T ss_dssp             CSSCEEEE-EEGGGTTHHHHHCCSSEEEEECTT----------STTHHHHHHHHHCS--CCSEEEE----CTTTCBHHHH
T ss_pred             cCCCceEE-ecchHHHHHHHhccccccccccCC----------cchHHHHHHHHhcc--cCceEEE----eccEEcHHHH
Confidence            66665544 5443332   11222111111000          01234445555431  3577866    3332222122


Q ss_pred             cccc---ccccccchHHHHHHhH
Q 011203          162 AQFE---FETELNTLHPILSECR  181 (491)
Q Consensus       162 ~~~~---~~~~~~~~~~~i~~lR  181 (491)
                      ..+.   .+++++|++++|.++|
T Consensus       133 ~~L~~~lp~~~~vd~s~~i~~lR  155 (155)
T d1chma1         133 DKLAARYPDAELVDVAAACMRMR  155 (155)
T ss_dssp             HHHHHHCTTCEEEECHHHHHHHH
T ss_pred             HHHHHhCCCCEEEEhHHHHHhhC
Confidence            2222   3678899999999998


No 11 
>d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]}
Probab=98.82  E-value=4.1e-10  Score=97.51  Aligned_cols=134  Identities=10%  Similarity=0.039  Sum_probs=79.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEecCcceeeecCCcccccccCCCceeecCCCCCC---EEEEEE
Q 011203            8 SPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG---FYGAID   84 (491)
Q Consensus         8 ~~~~~~~~~~~~R~~rl~~~~~~~~~~~~~~~~~lvvl~g~~~~~~~~~d~~~~f~~~~~~~YLtG~~~~~---~~lvi~   84 (491)
                      ...+|+.+||.+|++||++.|+++    ++  |+++|.                  ...|++|||||....   .+++++
T Consensus        15 ~~~pFs~~E~~~R~~klr~~M~e~----~i--Dallit------------------~~~ni~YlTGf~~~~~~~~~~l~v   70 (156)
T d1kp0a1          15 KYTPFSZAEMTRRZBRLRAWMAKS----BI--DAVLFT------------------SYHNINYYSGWLYCYFGRKYAZVI   70 (156)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHHHHH----TC--SEEEEC------------------SHHHHHHHHSCCCCCTTCCCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHC----CC--CEEEEc------------------CcccCeeecCCCcCccceeEEEEc
Confidence            457899999999999999999996    77  655443                  345799999987422   233343


Q ss_pred             eCCCeeEEeecCCCCccc--cccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCCcc
Q 011203           85 IATGKSILFAPRLPPDYA--VWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPA  162 (491)
Q Consensus        85 ~~~g~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~  162 (491)
                      . ++.++++++..+...+  .+......+          .....+.+.+.+.+...  +.++|++    +.+..++....
T Consensus        71 ~-~~~~~~~~~~~~~~~a~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~--~~~~ig~----E~~~~~~~~~~  133 (156)
T d1kp0a1          71 B-ZVKAVTISKGIDGGMPWRRSFGBNIVY----------TDWKRDNFYSAVKKLVK--GAKZIGI----EHDHVTLBHRR  133 (156)
T ss_dssp             C-SSCEEEEEEGGGTTHHHHHCSSEEEEE----------CSSSTTHHHHHHHHHHT--TCSEEEE----CTTTCBHHHHH
T ss_pred             C-CCCcEEEechhhhhhhhccccccceee----------ecCcchHHHHHHHHhcc--ccceeee----ecceEcHHHHH
Confidence            4 4567777776544321  110000000          00112445555555432  3567865    43333322222


Q ss_pred             ccc---ccccccchHHHHHHhHh
Q 011203          163 QFE---FETELNTLHPILSECRV  182 (491)
Q Consensus       163 ~~~---~~~~~~~~~~~i~~lR~  182 (491)
                      .+.   .+++++|++.+|.++|+
T Consensus       134 ~L~~~l~~~~~vD~s~~i~~~RM  156 (156)
T d1kp0a1         134 ZLZKALPGTEFVDVGZPVMWZRV  156 (156)
T ss_dssp             HHHHHSTTCEEEECHHHHHHHHT
T ss_pred             HHHHhCCCCEEEEhhHHHHHhhC
Confidence            222   36788999999999996


No 12 
>d1pv9a1 c.55.2.1 (A:8-124) Aminopeptidase P {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.18  E-value=1.6e-07  Score=76.60  Aligned_cols=96  Identities=19%  Similarity=0.225  Sum_probs=54.1

Q ss_pred             cCCCceeecCCCCCCEEEEEEeCCCeeEEeecCCCCccccccccCCChhHHHHHhcCcee--cchhHHHHHHHhcccCCC
Q 011203           64 QESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMV--YYTDEIVGVLQGHYKEPG  141 (491)
Q Consensus        64 ~~~~~~YLtG~~~~~~~lvi~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~  141 (491)
                      +..|++|||||......+++.+ +++++++++.++...+.-            ....+-.  .+.+++.+.+.      +
T Consensus        17 ~~~ni~YlTGf~~~~~~~lli~-~~~~~li~~~~~~~~a~~------------~~~~~~~~~~~~~~~~~~l~------~   77 (117)
T d1pv9a1          17 KPVNVYYFSGTSPLGGGYIIVD-GDEATLYVPELEYEMAKE------------ESKLPVVKFKKFDEIYEILK------N   77 (117)
T ss_dssp             CHHHHHHHHSCCCSSCCEEEEE-TTEEEEEEEGGGHHHHHH------------HCSSCEEEESSTTHHHHHTT------T
T ss_pred             ccccceeeeCcCCCcceEEEec-CCCceEEEccchHHHHHh------------ccCCCEEEecchhhHHHHhc------c
Confidence            3457999999975433334433 688999999876542211            1111111  12334444332      4


Q ss_pred             CCeEEEecCCCCCCCCCCCccccc---ccccccchHHHHHHhHhc
Q 011203          142 KPLLFLLHGLNTDSNNFSKPAQFE---FETELNTLHPILSECRVF  183 (491)
Q Consensus       142 ~~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~lR~v  183 (491)
                      .++|++    | +..++.....++   ...++++++++|+++|+|
T Consensus        78 ~~~igi----E-~~l~~~~~~~l~~~l~~~~~~~~~~ii~~lR~I  117 (117)
T d1pv9a1          78 TETLGI----E-GTLSYSMVENFKEKSNVKEFKKIDDVIKDLRII  117 (117)
T ss_dssp             CSEEEE----C-TTSBHHHHHHHHHTC-CCEEEECHHHHHHHHTS
T ss_pred             CceEeE----c-ccccHHHHHHHHHhCCCCeEEEhHHHHHHcCcC
Confidence            578876    3 222222222222   356789999999999987


No 13 
>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.19  E-value=0.084  Score=46.10  Aligned_cols=39  Identities=18%  Similarity=0.288  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203          297 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL  335 (491)
Q Consensus       297 ~~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~  335 (491)
                      +..|++.+.+.++++++++.+|||++-.||...+...+.
T Consensus         4 e~~r~A~~ia~~~~~~~~~~i~pG~te~el~~~~~~~~~   42 (218)
T d1xgsa2           4 EKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIM   42 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999988887763


No 14 
>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.68  E-value=0.059  Score=49.56  Aligned_cols=87  Identities=17%  Similarity=0.227  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhcccccCccccccccCCcccC-CC
Q 011203          299 QSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHD-PG  377 (491)
Q Consensus       299 ~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he-~~  377 (491)
                      .|++.+.+.++++.+++.+|||++-.||.+.+...+.+...+.++                  ..+.++..++.+.+ .+
T Consensus        60 mR~Aa~Ia~~~~~~~~~~i~pG~te~el~~~~e~~~~~~g~~~~~------------------~~~~afp~~~~~n~~~~  121 (295)
T d1b6aa2          60 FREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGL------------------NAGLAFPTGCSLNNCAA  121 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTT------------------TEEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHhccccCc------------------ccccCCcccccccceec
Confidence            677889999999999999999999999999888777653322221                  11122222222111 01


Q ss_pred             CCCCCCCCCCCCCCcCcCCCCccCCCCEEEECCcccc
Q 011203          378 GYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF  414 (491)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~L~~Gmv~~iepg~y~  414 (491)
                      ++.           ....++++|++|.++.|+.|...
T Consensus       122 H~~-----------p~~~~~~~l~~GD~v~iD~g~~~  147 (295)
T d1b6aa2         122 HYT-----------PNAGDTTVLQYDDICKIDFGTHI  147 (295)
T ss_dssp             CCC-----------CCTTCCCBCCTTCCEEEEEEEEE
T ss_pred             ccc-----------cccccchhccCCcceEEEeeecc
Confidence            111           01235789999999999988764


No 15 
>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.53  E-value=1.1  Score=38.52  Aligned_cols=97  Identities=13%  Similarity=0.162  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC-CCcceEEeeCCCCcccccCCCCCCCCCccCCCCeE
Q 011203          192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRH-CSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMA  270 (491)
Q Consensus       192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~-~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v  270 (491)
                      ++++.+.+.++.+.+++.++||++-.||.+.+...+.+. |... .....--.-|....  ........++.+|++|-++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~~~-g~~~~~~~~~Ghg~g~~~~--e~~~~~~~~~~~L~~gMv~  186 (221)
T d1pv9a2         110 QREIYEIVLEAQKRAVEAAKPGMTAKELDSIAREIIKEY-GYGDYFIHSLGHGVGLEIH--EWPRISQYDETVLKEGMVI  186 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHT-TCGGGCCSCSEEECSSSSS--EEEEESTTCCCBCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHhhhhhc-ccCCceeccccCCCCcccc--hhcccccCCCceeCCCcEE
Confidence            455566677888899999999999999999888877764 5431 11111111122110  0000011256789999999


Q ss_pred             EEEeceEeCce-EeeeeeEEee
Q 011203          271 LLDMGAEYQFY-GSDITCSFPV  291 (491)
Q Consensus       271 ~~D~g~~~~gY-~sd~tRt~~v  291 (491)
                      .++.+....++ ..-+.-|++|
T Consensus       187 ~iep~~~~~~~~g~r~Ed~v~V  208 (221)
T d1pv9a2         187 TIEPGIYIPKLGGVRIEDTVLI  208 (221)
T ss_dssp             EECCEEEETTTEEEECBEEEEE
T ss_pred             EECCEEEECCCCEEEEeEEEEE
Confidence            99998876553 4556677777


No 16 
>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]}
Probab=90.97  E-value=0.94  Score=40.04  Aligned_cols=84  Identities=12%  Similarity=0.115  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCCcc----cccCCCCCCCCCccCCC
Q 011203          192 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAV----LHYGHAAAPNDRTFEDG  267 (491)
Q Consensus       192 ~r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~~~----~h~~~~~~p~~~~l~~G  267 (491)
                      ++++.+.+.++++.+++.++||++-.|+.+++...+.+. |........--.-|.....    .++.  ..-.+..|++|
T Consensus       120 ~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~a~~~~~~~~-g~~~~~~~~g~g~g~~~~~~p~~~~~~--~~~~~~~L~~g  196 (262)
T d2gg2a1         120 GERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE-GFSVVREYCGHGIGRGFHEEPQVLHYD--SRETNVVLKPG  196 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHT-TCEECSSCCEEECSSSSSEEEEECSSC--CTTCCCBCCTT
T ss_pred             chhHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCCCcccccc--ccccceEecCC
Confidence            445556667889999999999999999999888877664 5421111111111211111    1111  11146789999


Q ss_pred             CeEEEEeceEe
Q 011203          268 DMALLDMGAEY  278 (491)
Q Consensus       268 d~v~~D~g~~~  278 (491)
                      .++.++-+..+
T Consensus       197 mv~~iEp~~~~  207 (262)
T d2gg2a1         197 MTFTIEPMVNA  207 (262)
T ss_dssp             CEEEECCEEES
T ss_pred             eEEEecccccc
Confidence            99999987543


No 17 
>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.12  E-value=0.54  Score=41.81  Aligned_cols=38  Identities=11%  Similarity=0.036  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011203          298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL  335 (491)
Q Consensus       298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~  335 (491)
                      .+|++.+.+.++++++++.++||++-.||...+.+.+.
T Consensus         7 ~~r~A~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~   44 (264)
T d2v3za2           7 VLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFN   44 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence            46788889999999999999999999999988876653


No 18 
>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]}
Probab=88.84  E-value=0.71  Score=40.52  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011203          298 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE  336 (491)
Q Consensus       298 ~~~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~~~  336 (491)
                      ..|++.+.+.++++++.+.++||++-.||...+++.+.+
T Consensus        11 ~~R~A~~i~~~~~~~~~~~i~~G~se~ei~~~~~~~~~~   49 (249)
T d1qxya_          11 ALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEE   49 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHH
Confidence            357777888899999999999999999999888877644


No 19 
>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]}
Probab=86.89  E-value=2.6  Score=36.43  Aligned_cols=97  Identities=10%  Similarity=-0.080  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCCCcceEEeeCCCC---cccccCC-C-CCCCCCccCCC
Q 011203          193 QFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS---AVLHYGH-A-AAPNDRTFEDG  267 (491)
Q Consensus       193 r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~~~~~iv~sG~~~---~~~h~~~-~-~~p~~~~l~~G  267 (491)
                      +++.+++..+++++++.++||++-.||.+++...+.+. |.... +..-+.-|...   ..+|... . ...++.+|++|
T Consensus       119 ~~~~~~~~~~~~~~~~~~kpG~~~~~v~~a~~~~~~~~-g~~~~-~~~~~ghg~G~~~~~~~~~~~~~~~~~~~~~L~~G  196 (246)
T d1chma2         119 LRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKH-DVLQY-RTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPG  196 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHH-TCGGG-BCSCSCBBCSBEETTEECCTTSBCCTTCCCBCCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccchhhhhhhhhHHhh-ccccc-cccccccccCcccccccccccccccCCCceecCCC
Confidence            56677788899999999999999999999888887765 43211 00000111100   0111100 0 11246789999


Q ss_pred             CeEEEEeceEeC-c----eEeeeeeEEee
Q 011203          268 DMALLDMGAEYQ-F----YGSDITCSFPV  291 (491)
Q Consensus       268 d~v~~D~g~~~~-g----Y~sd~tRt~~v  291 (491)
                      -++.++-|.-.. +    ...-+.-|++|
T Consensus       197 Mv~~iEp~i~~~~~~~g~gG~r~Ed~v~V  225 (246)
T d1chma2         197 MVVSMEPMIMLPEGLPGAGGYREHDILIV  225 (246)
T ss_dssp             CEEEECCEEEECTTSTTCEEEECBEEEEE
T ss_pred             CEEEEcCeEEccCCCCcccEEEEEEEEEE
Confidence            999999776532 1    13346677777


No 20 
>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]}
Probab=83.04  E-value=3.9  Score=35.24  Aligned_cols=81  Identities=12%  Similarity=0.136  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCCC-CcceEEeeCCCCcccccCC----CCCC-CCCccCC
Q 011203          193 QFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGENSAVLHYGH----AAAP-NDRTFED  266 (491)
Q Consensus       193 r~A~~i~~~~~~~~~~~i~~G~tE~ei~a~~~~~~~~~~g~~~~-~~~~iv~sG~~~~~~h~~~----~~~p-~~~~l~~  266 (491)
                      +++.+++.++++++++.++||++-.++.+.+...+.+. |.... .+... .-|..   .|..+    ...+ ++.+|++
T Consensus       121 ~~~~~~~~~a~~a~i~~~kpG~~~~dv~~~~~~~~~~~-g~~~~~~~~GH-giG~~---~~~~p~~~~~~~~~~~~~le~  195 (249)
T d1o0xa_         121 KELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESV-GFNVIRDYVGH-GVGRE---LHEDPQIPNYGTPGTGVVLRK  195 (249)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHT-TCEECCSSCEE-ECSSS---SSEEEEECSCCCTTCSCBCCT
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhc-CCeeecCCccc-ccccC---CCcCCccceeccCCCCccccC
Confidence            34456667788899999999999999999998888775 54211 11000 11111   11110    0011 4678999


Q ss_pred             CCeEEEEeceEe
Q 011203          267 GDMALLDMGAEY  278 (491)
Q Consensus       267 Gd~v~~D~g~~~  278 (491)
                      |.++.++.+...
T Consensus       196 gMv~~iEp~~~~  207 (249)
T d1o0xa_         196 GMTLAIEPMVSE  207 (249)
T ss_dssp             TCEEEECCEEES
T ss_pred             CeEEEecceeec
Confidence            999999987653


No 21 
>d1l1pa_ d.26.1.1 (A:) Trigger factor PPIase domain {Escherichia coli [TaxId: 562]}
Probab=23.42  E-value=16  Score=26.94  Aligned_cols=22  Identities=18%  Similarity=0.188  Sum_probs=19.0

Q ss_pred             CCCCccCCCCeEEEEeceEeCc
Q 011203          259 PNDRTFEDGDMALLDMGAEYQF  280 (491)
Q Consensus       259 p~~~~l~~Gd~v~~D~g~~~~g  280 (491)
                      +.+|.++.||.|.||+-+..+|
T Consensus        10 ~~dr~a~~GD~v~id~~~~~dG   31 (106)
T d1l1pa_          10 EKDGAVEAEDRVTIDFTGSVDG   31 (106)
T ss_dssp             CCSSSCCTTEEEEEEEECCSSS
T ss_pred             cCcccccCCCEEEEEEEEEECC
Confidence            3689999999999999887766


No 22 
>d1t11a3 d.26.1.1 (A:135-247) Trigger factor PPIase domain {Vibrio cholerae [TaxId: 666]}
Probab=20.91  E-value=23  Score=26.31  Aligned_cols=21  Identities=19%  Similarity=0.191  Sum_probs=16.2

Q ss_pred             CCCccCCCCeEEEEeceEeCc
Q 011203          260 NDRTFEDGDMALLDMGAEYQF  280 (491)
Q Consensus       260 ~~~~l~~Gd~v~~D~g~~~~g  280 (491)
                      .++..+.||.|.||+-+..+|
T Consensus        20 v~r~a~~gD~v~id~~~~~dG   40 (113)
T d1t11a3          20 VDEAAENGKRVSIDFVGSIDG   40 (113)
T ss_dssp             CSCCCCTTCEEEEEEEEESSS
T ss_pred             CcccccCCCEEEEEEEEEECC
Confidence            356678999999998766554


No 23 
>d1gs0a1 a.41.1.1 (A:207-340) Domain of poly(ADP-ribose) polymerase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.63  E-value=58  Score=24.92  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=23.7

Q ss_pred             eeCCCCCHHH-HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011203          290 PVNGKFTSDQ-SLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII  334 (491)
Q Consensus       290 ~v~G~~~~~~-~~~~~~~~~a~~~~~~~lkpG~~~~ev~~~~~~~~  334 (491)
                      ++ |+.|.+| .+.|+++.+..+ +   ++.+...+.+-++..+++
T Consensus        36 PL-GkLSk~qI~~g~~vL~~i~~-~---l~~~~~~~~l~~lsn~fY   76 (134)
T d1gs0a1          36 PL-GKLTVAQIKAGYQSLKKIED-C---IRAGQHGRALVEACNEFY   76 (134)
T ss_dssp             CG-GGCCHHHHHHHHHHHHHHHH-H---HHTTCCSHHHHHHHHHHH
T ss_pred             Cc-ccCCHHHHHHHHHHHHHHHH-H---HhccchhhHHHHHHHHHH
Confidence            66 8999987 445555544433 3   345555666666665554


Done!