STRING 9.05 
  AT5G04310 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT5G04310
pectate lyase family protein; pectate lyase family protein; FUNCTIONS IN- pectate lyase activity; INVOLVED IN- biological_process unknown; LOCATED IN- anchored to membrane; EXPRESSED IN- 14 plant structures; EXPRESSED DURING- 6 growth stages; CONTAINS InterPro DOMAIN/s- Pectin lyase fold/virulence factor (InterPro-IPR011050), AmbAllergen (InterPro-IPR018082), Pectate lyase/Amb allergen (InterPro-IPR002022), Pectin lyase fold (InterPro-IPR012334); BEST Arabidopsis thaliana protein match is- PMR6 (powdery mildew resistant 6); lyase/ pectate lyase (TAIR-AT3G54920.1); Has 988 Blast hits to [...] (518 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G45220
pectinesterase family protein; pectinesterase family protein; FUNCTIONS IN- enzyme inhibitor ac [...] (511 aa)
      0.909
AT5G49180
pectinesterase family protein; Encodes a putative pectin methylesterase. The gene is preferenti [...] (571 aa)
       0.899
AT5G19730
pectinesterase family protein; pectinesterase family protein; FUNCTIONS IN- pectinesterase acti [...] (383 aa)
       0.899
AT5G17200
glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein; glycoside [...] (421 aa)
       0.899
AT5G14650
polygalacturonase, putative / pectinase, putative; polygalacturonase, putative / pectinase, put [...] (435 aa)
       0.899
AT5G04970
pectinesterase, putative; pectinesterase, putative; FUNCTIONS IN- enzyme inhibitor activity, pe [...] (624 aa)
       0.899
PME44
enzyme inhibitor/ pectinesterase; enzyme inhibitor/ pectinesterase; FUNCTIONS IN- enzyme inhibi [...] (525 aa)
       0.899
AT3G59850
polygalacturonase, putative / pectinase, putative; polygalacturonase, putative / pectinase, put [...] (388 aa)
       0.899
ADPG1
ADPG1; polygalacturonase; Encodes ADPG1, a polygalacturonase protein involved in silique and an [...] (431 aa)
       0.899
AT3G43270
pectinesterase family protein; pectinesterase family protein; FUNCTIONS IN- enzyme inhibitor ac [...] (527 aa)
       0.899
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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