Query 011204
Match_columns 491
No_of_seqs 356 out of 982
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 03:18:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 5.2E-98 2E-102 766.7 30.0 342 67-409 1-346 (346)
2 3zsc_A Pectate trisaccharide-l 100.0 1.1E-68 3.7E-73 547.8 28.9 289 86-411 8-332 (340)
3 2qy1_A Pectate lyase II; GAG l 100.0 2.1E-66 7.1E-71 529.5 22.0 277 90-409 1-326 (330)
4 1pcl_A Pectate lyase E; lyase 100.0 3.9E-65 1.3E-69 524.7 28.9 297 86-409 3-354 (355)
5 3vmv_A Pectate lyase; polysacc 100.0 1.1E-64 3.8E-69 515.9 24.2 285 89-409 2-324 (326)
6 1pe9_A Pectate lyase A; parall 100.0 9.1E-65 3.1E-69 522.8 22.9 288 90-409 13-360 (361)
7 1vbl_A Pectate lyase 47; PL 47 100.0 7.2E-63 2.5E-67 516.7 25.0 301 84-409 5-414 (416)
8 2o04_A Pectate lyase, PL; hexa 100.0 8.3E-63 2.9E-67 514.0 24.4 298 84-409 5-397 (399)
9 1air_A Pectate lyase C, PELC; 100.0 5.7E-60 2E-64 486.0 20.2 279 90-411 3-344 (353)
10 1idk_A Pectin lyase A; signal, 100.0 2E-59 6.7E-64 483.0 22.8 285 86-409 2-358 (359)
11 1qcx_A Pectin lyase B; beta-he 100.0 2E-57 6.8E-62 468.1 21.6 280 86-409 2-359 (359)
12 3gq8_A Preneck appendage prote 98.8 1.2E-07 4.1E-12 103.5 19.9 127 173-319 136-281 (609)
13 3gqn_A Preneck appendage prote 98.8 1.7E-07 6E-12 104.1 19.6 127 173-319 136-281 (772)
14 2pyg_A Poly(beta-D-mannuronate 98.4 2.7E-05 9.3E-10 78.8 20.6 154 178-337 132-294 (377)
15 1bhe_A PEHA, polygalacturonase 98.2 1.6E-05 5.4E-10 81.8 14.4 100 174-298 177-281 (376)
16 2uvf_A Exopolygalacturonase; G 98.2 1.3E-05 4.4E-10 87.7 14.2 92 174-288 357-459 (608)
17 2iq7_A Endopolygalacturonase; 98.2 1.7E-05 5.8E-10 80.7 13.9 107 174-298 126-232 (339)
18 1ia5_A Polygalacturonase; glyc 98.2 1.9E-05 6.5E-10 80.4 13.9 107 174-298 130-236 (339)
19 3jur_A EXO-poly-alpha-D-galact 98.1 2.3E-05 7.7E-10 82.9 14.6 118 174-316 216-349 (448)
20 1ru4_A Pectate lyase, PEL9A; p 98.1 0.0003 1E-08 73.3 22.3 131 102-259 12-172 (400)
21 2inu_A Insulin fructotransfera 98.1 2E-05 6.7E-10 82.4 12.6 190 136-340 59-303 (410)
22 1nhc_A Polygalacturonase I; be 98.1 3.2E-05 1.1E-09 78.5 13.1 106 174-298 126-231 (336)
23 1rmg_A Rgase A, rhamnogalactur 98.0 0.00017 5.7E-09 75.6 17.8 97 214-317 175-273 (422)
24 1hg8_A Endopolygalacturonase; 98.0 6.5E-05 2.2E-09 76.8 14.3 105 174-288 130-236 (349)
25 1dbg_A Chondroitinase B; beta 97.9 0.00022 7.6E-09 76.6 17.0 123 122-259 31-169 (506)
26 1rmg_A Rgase A, rhamnogalactur 97.9 0.00028 9.5E-09 73.9 17.0 126 154-313 107-246 (422)
27 1ia5_A Polygalacturonase; glyc 97.9 7.5E-05 2.6E-09 76.0 12.0 107 173-313 106-230 (339)
28 2iq7_A Endopolygalacturonase; 97.9 7.7E-05 2.6E-09 75.8 12.0 107 173-313 102-226 (339)
29 1bhe_A PEHA, polygalacturonase 97.8 0.00026 8.9E-09 72.7 14.9 136 173-339 153-307 (376)
30 1nhc_A Polygalacturonase I; be 97.8 0.00012 4E-09 74.4 11.7 105 174-313 103-225 (336)
31 1czf_A Polygalacturonase II; b 97.8 8.9E-05 3.1E-09 76.2 10.4 116 174-298 129-257 (362)
32 1czf_A Polygalacturonase II; b 97.7 0.00022 7.6E-09 73.3 12.0 64 216-290 150-222 (362)
33 1ogo_X Dextranase; hydrolase, 97.6 0.00024 8.3E-09 77.3 11.9 100 178-288 331-441 (574)
34 1hg8_A Endopolygalacturonase; 97.6 0.00076 2.6E-08 68.9 14.9 106 173-312 104-237 (349)
35 1k5c_A Endopolygalacturonase; 97.6 0.00025 8.6E-09 72.1 11.0 124 174-318 122-251 (335)
36 1h80_A IOTA-carrageenase; hydr 97.6 0.00098 3.3E-08 70.9 15.7 122 155-288 109-243 (464)
37 1gq8_A Pectinesterase; hydrola 97.4 0.023 7.8E-07 57.6 22.7 132 124-287 21-172 (319)
38 1xg2_A Pectinesterase 1; prote 97.4 0.017 5.9E-07 58.5 20.7 115 124-260 17-151 (317)
39 2uvf_A Exopolygalacturonase; G 97.4 0.0082 2.8E-07 65.6 19.4 140 174-336 334-490 (608)
40 1x0c_A Isopullulanase; glycosi 97.3 0.0018 6.1E-08 70.2 13.0 102 177-288 290-403 (549)
41 1pxz_A Major pollen allergen J 97.2 0.013 4.4E-07 60.0 17.7 132 174-337 153-307 (346)
42 1qcx_A Pectin lyase B; beta-he 97.2 0.011 3.8E-07 60.8 17.0 67 215-289 123-198 (359)
43 3zsc_A Pectate trisaccharide-l 97.1 0.032 1.1E-06 57.1 19.1 133 174-338 119-289 (340)
44 1k5c_A Endopolygalacturonase; 97.0 0.0016 5.5E-08 66.2 9.0 107 150-289 67-193 (335)
45 3gqn_A Preneck appendage prote 97.0 0.017 5.7E-07 64.7 17.3 135 179-337 182-343 (772)
46 3jur_A EXO-poly-alpha-D-galact 97.0 0.0079 2.7E-07 63.5 14.0 118 173-313 192-322 (448)
47 3gq8_A Preneck appendage prote 96.9 0.007 2.4E-07 66.3 12.8 90 179-292 182-276 (609)
48 3vmv_A Pectate lyase; polysacc 96.9 0.028 9.7E-07 57.1 16.4 117 174-313 123-249 (326)
49 2nsp_A Pectinesterase A; micha 96.6 0.051 1.8E-06 55.5 16.0 133 124-268 20-180 (342)
50 1idk_A Pectin lyase A; signal, 96.3 0.043 1.5E-06 56.5 13.7 110 174-313 156-279 (359)
51 1dbg_A Chondroitinase B; beta 96.3 0.033 1.1E-06 59.8 13.3 18 174-192 121-138 (506)
52 3uw0_A Pectinesterase; right-h 96.3 0.15 5E-06 52.7 17.4 135 124-268 46-207 (364)
53 2o04_A Pectate lyase, PL; hexa 96.1 0.16 5.3E-06 53.1 16.6 147 174-335 186-354 (399)
54 1ru4_A Pectate lyase, PEL9A; p 95.5 0.53 1.8E-05 48.9 18.0 84 174-259 132-229 (400)
55 1pcl_A Pectate lyase E; lyase 95.1 0.18 6.2E-06 51.7 12.6 127 173-313 135-279 (355)
56 1h80_A IOTA-carrageenase; hydr 95.1 0.21 7E-06 53.1 13.4 101 174-303 170-282 (464)
57 2qy1_A Pectate lyase II; GAG l 95.0 0.17 5.7E-06 51.4 12.0 140 174-335 116-272 (330)
58 1vbl_A Pectate lyase 47; PL 47 94.9 0.27 9.3E-06 51.5 13.4 147 174-335 192-361 (416)
59 2pyg_A Poly(beta-D-mannuronate 94.9 0.32 1.1E-05 48.8 13.5 68 124-192 21-110 (377)
60 1air_A Pectate lyase C, PELC; 94.2 0.17 5.9E-06 51.9 9.8 142 174-334 133-284 (353)
61 2x6w_A Tail spike protein; vir 93.8 0.13 4.5E-06 56.2 8.4 55 226-287 233-289 (600)
62 1ogo_X Dextranase; hydrolase, 93.6 0.23 7.9E-06 54.1 10.0 87 174-261 350-444 (574)
63 2vbk_A Tailspike-protein; vira 93.0 0.91 3.1E-05 48.3 12.8 41 124-165 70-118 (514)
64 1pe9_A Pectate lyase A; parall 92.8 0.4 1.4E-05 49.3 9.8 127 173-313 145-290 (361)
65 2inu_A Insulin fructotransfera 92.3 0.5 1.7E-05 49.5 9.7 96 155-257 141-249 (410)
66 3grh_A YBHC, acyl-COA thioeste 91.9 3.3 0.00011 43.5 15.4 122 124-260 91-278 (422)
67 1x0c_A Isopullulanase; glycosi 90.2 0.38 1.3E-05 52.1 6.5 81 180-261 318-406 (549)
68 3eqn_A Glucan 1,3-beta-glucosi 82.1 48 0.0016 37.3 17.8 40 124-164 68-119 (758)
69 2x6w_A Tail spike protein; vir 81.7 5.6 0.00019 43.5 10.1 44 217-269 200-253 (600)
70 3t9g_A Pectate lyase; PL3, par 73.1 18 0.00062 34.2 9.5 50 212-262 84-133 (196)
71 2vbk_A Tailspike-protein; vira 51.9 53 0.0018 35.1 9.3 110 216-339 210-335 (514)
72 3t9g_A Pectate lyase; PL3, par 50.5 36 0.0012 32.2 7.0 68 174-259 113-180 (196)
73 1ee6_A Pectate lyase; parallel 46.0 92 0.0032 29.4 9.1 47 212-259 80-126 (197)
74 3arc_L Photosystem II reaction 35.6 32 0.0011 24.1 3.0 22 455-476 8-29 (37)
75 1xg2_A Pectinesterase 1; prote 33.7 1.8E+02 0.0061 29.0 9.6 58 174-259 113-170 (317)
76 1gq8_A Pectinesterase; hydrola 28.2 90 0.0031 31.2 6.3 58 174-259 117-174 (319)
77 1ee6_A Pectate lyase; parallel 28.0 1.6E+02 0.0053 27.9 7.5 85 157-260 86-177 (197)
78 3eqn_A Glucan 1,3-beta-glucosi 27.3 1.1E+02 0.0039 34.3 7.4 68 123-191 418-499 (758)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=5.2e-98 Score=766.71 Aligned_cols=342 Identities=50% Similarity=0.874 Sum_probs=323.9
Q ss_pred CCccccccccCcchhhhhhccccCCCCCCCCCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHhcCCCeEEEEccCeeEE
Q 011204 67 GNPIDDCWHCDPNWAANRQRLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIK 146 (491)
Q Consensus 67 gnpid~cwr~~~~wa~~~~~LA~~a~GfG~~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~~~~Pr~IvF~~sg~I~ 146 (491)
+||||+||||+++|+.+||+||.||+|||++||||+||++|+||+++| ++++|+|||||+|+++++|+||+|+++|+|+
T Consensus 1 ~~~~~~c~~~~~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d-~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~ 79 (346)
T 1pxz_A 1 DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDD-NPVNPTPGTLRYGATREKALWIIFSQNMNIK 79 (346)
T ss_dssp CCTTHHHHHSSCCTTTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCC-CTTSCCTTSHHHHHHCSSCEEEEESSCEEEC
T ss_pred CCccchhhccCcchhhhhhhcccCCccccCCCcCCCCccEEEECChHH-cccccCcchhHHHhccCCCeEEEEcCCcEEe
Confidence 699999999999999999999999999999999999999999999876 5899999999999999999999999999999
Q ss_pred ecceEEecCCceEEeecceEEEec-ceEEEEeeeccEEEEeeEEEeeccCCCccc-cCCCCccccCcCCCCCceeeeCCc
Q 011204 147 LKHELIINSYKTIDGRGANVEITG-NGCLTLQYVSHVIIHNVHIHHCKPSGNTMI-ASSPTHVGYRGKSDGDGISIFGSQ 224 (491)
Q Consensus 147 L~~~L~V~SnkTI~G~Ga~v~I~G-gg~i~i~~a~NVIIrnL~Ir~~~~~g~~~v-~~s~~~~g~r~~~dgDaIsI~gs~ 224 (491)
|+++|.|+|||||+|||++++|.| +.+|++++++|||||||+|+++.|.++..+ ++++.|+|++...++|+|+|++++
T Consensus 80 l~~~l~V~sn~TI~G~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~ 159 (346)
T 1pxz_A 80 LKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVT 159 (346)
T ss_dssp CSSCEECCSSEEEECTTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCE
T ss_pred cCccEEecCCeEEEccCCceEEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCc
Confidence 999999999999999999999998 446999999999999999999988776666 888888898888999999999999
Q ss_pred eEEEEeeEeecCCCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccCCeEE
Q 011204 225 KIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRGYIH 304 (491)
Q Consensus 225 nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~G~vH 304 (491)
|||||||+|+|+.||++|+++++++||||||+|++|+|+||+|++|++..|..++||||||+|++++.+|+||+|+|++|
T Consensus 160 nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~g~~h 239 (346)
T 1pxz_A 160 NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVH 239 (346)
T ss_dssp EEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSEEE
T ss_pred eEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEecceEE
Confidence 99999999999999999999999999999999999999999999998877777999999999976899999999999999
Q ss_pred EEcceEeCCcceEeecCCCceEEEeCcEEeCCCCCCCcceeeecccC-ccccCCCeeeccCceEEeceEeeeCCCCCCc-
Q 011204 305 VVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETD-ESEWAGWNWRTEGDVMVNGAFFVPSGAGLST- 382 (491)
Q Consensus 305 vvNN~y~nw~~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~~-~~~~~~w~w~s~Gd~~~nGa~f~~sg~~~~~- 382 (491)
++||||++|.+|++++++++++++|+|||+++++|..|+|+||++++ +.+|++|+|+++||+|+||++|.+||.+...
T Consensus 240 v~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~~~~~~k~v~~~~~~~~~~~~~~~~~~~~g~~~~nG~~~~~s~~~~~~~ 319 (346)
T 1pxz_A 240 VANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGKTEETN 319 (346)
T ss_dssp EESCEECCCSSCSEEEESCCEEEEESCEEECCSCGGGCBSEEECSCSCHHHHTTSCEEEESCEEETTCBCCCBSCCCCCC
T ss_pred EEeeEEEcccceEEeccCCceEEEECCEEECCCCCcccccEEEeccCCccccccccEecCCCeEEeceEecCCCCCccCC
Confidence 99999999999999999999999999999999999899999999877 6789999999999999999999999976544
Q ss_pred cCCCCCceecCChhhHHHHHhcccCcc
Q 011204 383 QYAKASSVEPKSAALIDQLTMNAGVFG 409 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~v~~lt~~AG~~~ 409 (491)
+|.++|+++++|+++|++||++||+|.
T Consensus 320 ~y~~~~~~~~~~~~~v~~~~~~aG~~~ 346 (346)
T 1pxz_A 320 IYNSNEAFKVENGNAAPQLTKNAGVVT 346 (346)
T ss_dssp CCCTTTCCCCCCGGGHHHHTTTCSSCC
T ss_pred CCCcccccccCCHHHHHHHhhhccCCC
Confidence 599999999999999999999999984
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=100.00 E-value=1.1e-68 Score=547.81 Aligned_cols=289 Identities=27% Similarity=0.329 Sum_probs=243.0
Q ss_pred cccc-CCCCCCCCCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHhcCCCeEEEEccCeeEEec--ceEEecCCceEEee
Q 011204 86 RLAD-CSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLK--HELIINSYKTIDGR 162 (491)
Q Consensus 86 ~LA~-~a~GfG~~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~~~~Pr~IvF~~sg~I~L~--~~L~V~SnkTI~G~ 162 (491)
..|. .|||||++||||+||++|+|||++| ||+|+++++||||+|++ +|+++ ++|+|+|||||+||
T Consensus 8 G~As~~AeG~g~~ttGG~gG~v~~VTtl~d----------Lr~al~~~~PriIvv~G--~I~~~~~~~l~v~snkTI~G~ 75 (340)
T 3zsc_A 8 GFASVPTADLPEGTVGGLGGEIVFVRTAEE----------LEKYTTAEGKYVIVVDG--TIVFEPKREIKVLSDKTIVGI 75 (340)
T ss_dssp SGGGCCCSSCTTSCCTTTTSEEEEECSHHH----------HHHHHTSSSCEEEEEEE--EEEEEEEEEEEECSSEEEEEE
T ss_pred eeecccccccCCCCccCCCceEEEeCCHHH----------HHHHHhCCCCEEEEECc--EEEeCCcceEEecCCCEEEec
Confidence 3444 5899999999999999999999987 89999999999999865 56655 99999999999999
Q ss_pred cceEEEecceEEEEeeeccEEEEeeEEEeeccCCCccccCCCCcccc-CcCCCCCceeeeCCceEEEEeeEeecCCCCee
Q 011204 163 GANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGY-RGKSDGDGISIFGSQKIWVDHCSLSYCTDGLI 241 (491)
Q Consensus 163 Ga~v~I~Ggg~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~-r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGli 241 (491)
|++ +|.|.+ |+|++++|||||||+||++.+.+ .| +...++|+|+|++++|||||||+|+|+.||++
T Consensus 76 ga~-~I~G~G-i~I~~a~NVIIrnl~i~~~~~~~-----------~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~i 142 (340)
T 3zsc_A 76 NDA-KIVGGG-LVIKDAQNVIIRNIHFEGFYMED-----------DPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAV 142 (340)
T ss_dssp EEE-EEEEEE-EEEESCEEEEEESCEEECCCCTT-----------CTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSE
T ss_pred cCc-EEecCc-eEEEcCceEEEeCeEEECCcccc-----------CccCCcCCCCeEEEecCCcEEEEeeeeccCCccce
Confidence 999 999886 99999999999999999975421 11 22468999999999999999999999999999
Q ss_pred EeeeCCceEEEEcceeccCCceeeeccCCcc--cCCCC-eEEEEEeeEecCCCcccCccccCCeEEEEcceEeC------
Q 011204 242 DAIMGSTGITISNNYFSHHNEVMLLGHNDKY--ALDMG-MQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTS------ 312 (491)
Q Consensus 242 Dv~~gS~~ITISnn~f~~h~k~mL~G~sds~--~~D~g-~~VTihhN~F~~n~~qR~Pr~R~G~vHvvNN~y~n------ 312 (491)
|+++++++||||||+|++|+|+||+|++|++ ..|+| ++||||||+| .++.|||||+|+|++|+|||||++
T Consensus 143 di~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~ 221 (340)
T 3zsc_A 143 DIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYF-KNLIQRMPRIRFGMAHVFNNFYSMGLRTGV 221 (340)
T ss_dssp EEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEE-ESCCBCTTEEESSEEEEESCEEECCCCCSC
T ss_pred EEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEe-cCCCCCCCcccCCeEEEEccEEECCccccc
Confidence 9999999999999999999999999999976 46666 8999999999 578999999999999999999999
Q ss_pred ----CcceEeecCCCceEEEeCcEEeCCCCCCC-----cceeeecccCccccCCCeeeccCceEEec----eEeeeCCCC
Q 011204 313 ----WEMYAIGGSANPTINSQGNRYTAPPDDNA-----KEVTKRVETDESEWAGWNWRTEGDVMVNG----AFFVPSGAG 379 (491)
Q Consensus 313 ----w~~yaiggs~~~~I~segNyF~~~~~~~~-----k~vt~r~~~~~~~~~~w~w~s~Gd~~~nG----a~f~~sg~~ 379 (491)
|.+|+++++++++|++|+|||++++++.. ..++.... +..|.+.+.| +.|..++..
T Consensus 222 ~~~~~~~yai~~~~~a~i~~E~N~F~~~~~~~~~~~~~~p~~~~~~-----------~~~G~~~~~~~~~~n~~~~~~~~ 290 (340)
T 3zsc_A 222 SGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMG-----------PVEGYLTLGEGDAKNEFYYCKEP 290 (340)
T ss_dssp SSCCSCCEEEEEETTCEEEEESCEEECSCHHHHHTTCCBEEEEECT-----------TTBCEEEECCGGGCCEEESBCCC
T ss_pred cccceeeeeEecCCCCEEEEECcEEECCCcccccccccccccccCC-----------CCceEEEecCcccceeeccCCCC
Confidence 99999999999999999999999876211 11222211 2335555666 667655432
Q ss_pred C-------Cc--cCCCCCceecCChhhH-HHHHhcccCcccC
Q 011204 380 L-------ST--QYAKASSVEPKSAALI-DQLTMNAGVFGGH 411 (491)
Q Consensus 380 ~-------~~--~~~~~~~~~~~~~~~v-~~lt~~AG~~~~~ 411 (491)
. +. .+.++|+|++.|++.| +.|++.||+-+..
T Consensus 291 ~~~~~~~~~~~~~~~~pY~Y~l~~a~~v~~~V~~~AG~gk~~ 332 (340)
T 3zsc_A 291 EVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGAGKLV 332 (340)
T ss_dssp CCBCSSTTSCSCCGGGTCCCCCCCGGGHHHHHHHHCSTTCCC
T ss_pred ccccccCCccccccCCCceeecCcHHHhhHHHhhcCCCCeee
Confidence 1 11 2357899999998888 7999999998763
No 3
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=100.00 E-value=2.1e-66 Score=529.53 Aligned_cols=277 Identities=25% Similarity=0.326 Sum_probs=238.6
Q ss_pred CCCCCCCCCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHhc---CCCeEEEEccCeeEEecc---------------eE
Q 011204 90 CSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQ---TEPIWITFASNMLIKLKH---------------EL 151 (491)
Q Consensus 90 ~a~GfG~~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~~---~~Pr~IvF~~sg~I~L~~---------------~L 151 (491)
+|+|||++||||++|++|+|||++| ||+|+.+ ++||||+| +|+|+++. +|
T Consensus 1 ga~Gfa~~ttGG~gg~~~~Vtt~~~----------L~~al~~~~~~~p~iI~~--~G~i~~~~~~~~c~~~~~~~~~~~l 68 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVPVNVATFEA----------MQSAIDSYSGSGGLVLNY--TGKFDFGTIKDVCAQWKLPAKTVQI 68 (330)
T ss_dssp CCCSTTTTCCTTTTSCCEEECSHHH----------HHHHHHHSCSSSCEEEEE--CCBCCGGGCCCGGGSTTSCCCEEEE
T ss_pred CCceeecCCCCCCCceEEEcCCHHH----------HHHHHhccCCCCCEEEEE--ccEEecccccccccccccccceeEE
Confidence 5899999999999999999999874 8999985 89999999 56888875 78
Q ss_pred EecCCceEEeecceEEEecceEEEEe-eeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeC-----Cce
Q 011204 152 IINSYKTIDGRGANVEITGNGCLTLQ-YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG-----SQK 225 (491)
Q Consensus 152 ~V~SnkTI~G~Ga~v~I~Ggg~i~i~-~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g-----s~n 225 (491)
++.|||||+|+++ +|.|.+ |+|+ +++|||||||+||++.+ ..++|+|+|++ ++|
T Consensus 69 ~v~sn~TI~G~~a--~i~g~g-l~i~~~~~NVIIrnl~i~~~~~-----------------~~~~DaI~i~g~~~~~s~n 128 (330)
T 2qy1_A 69 KNKSDVTIKGANG--SAANFG-IRVVGNAHNVIIQNMTIGLLQG-----------------GEDADSISLEGNSSGEPSK 128 (330)
T ss_dssp ESCCSEEEEECTT--CBBSSE-EEEESSCEEEEEESCEEESCSS-----------------GGGCCSEEEECBTTBCCEE
T ss_pred EcCCCeEEECCCc--EEeeee-EEEeCCCCeEEEeCeEEeCCCC-----------------CCCCcceeeccccCccccc
Confidence 8899999999876 567875 9998 89999999999998743 13789999995 999
Q ss_pred EEEEeeEeecCC-----------CCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCccc
Q 011204 226 IWVDHCSLSYCT-----------DGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQR 294 (491)
Q Consensus 226 VWIDHcS~S~~~-----------DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR 294 (491)
||||||+|+|.. ||++|+++++++||||||+|++|+|+||+|++|++..|.+++||||||+| +++.||
T Consensus 129 VWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f-~~~~~R 207 (330)
T 2qy1_A 129 IWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRF-ENVESR 207 (330)
T ss_dssp EEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEE-EEEEEC
T ss_pred EEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEE-cCCCCC
Confidence 999999999866 99999999999999999999999999999999998877779999999999 679999
Q ss_pred CccccCCeEEEEcceEeCCcceEeecCCCceEEEeCcEEeCCCCCCCcceeeecccCccccCCCeeeccCceEEe--ceE
Q 011204 295 MPRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWAGWNWRTEGDVMVN--GAF 372 (491)
Q Consensus 295 ~Pr~R~G~vHvvNN~y~nw~~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~~~~~~~~w~w~s~Gd~~~n--Ga~ 372 (491)
+||+|+|++|+|||||++|.+|+++++++++|++|+|||+++++| ++++ ++ ..+..|+| +|+ |++ +++
T Consensus 208 ~Pr~r~G~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p----~~~~-~~--~~~g~~~~--~~n-~~~~~~~~ 277 (330)
T 2qy1_A 208 VPLQRFGLSHIYNNYFNNVTTSGINVRMGGIAKIESNYFENIKNP----VTSR-DS--SEIGYWDL--INN-YVGSGITW 277 (330)
T ss_dssp TTEEESSEEEEESCEEEEECSCSEEEETTCEEEEESCEEEEEESS----EEEC-SS--SSBCEEEE--ESC-EECSCEEC
T ss_pred CCceecceEEEEeeEEEcccceEeccCCCcEEEEEccEEECCCCc----eeec-cC--CCceeEEE--eCC-cccccccc
Confidence 999999999999999999999999999999999999999998765 5555 22 23444555 577 888 676
Q ss_pred eeeCCCC---------CCccCC--CCCceecCChhhHH-HHHhcccCcc
Q 011204 373 FVPSGAG---------LSTQYA--KASSVEPKSAALID-QLTMNAGVFG 409 (491)
Q Consensus 373 f~~sg~~---------~~~~~~--~~~~~~~~~~~~v~-~lt~~AG~~~ 409 (491)
+.+++.. ....|. ++|+|++.|++.|. .|+++||+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~y~~~~a~~V~~~V~~~AGag~ 326 (330)
T 2qy1_A 278 GTPDGSKPYANATNWISTKVFPESLGYIYTVTPAAQVKAKVIATAGAGK 326 (330)
T ss_dssp CCCSSSSCCEECTTCCCSSCCCSCCCSCCCCCCGGGHHHHHHHHCSTTS
T ss_pred cccCcccccccccccCcccccccCCCceeeeCCHHHHHHhhHhccCCCc
Confidence 6665421 123455 88999999999995 5999999865
No 4
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=100.00 E-value=3.9e-65 Score=524.72 Aligned_cols=297 Identities=28% Similarity=0.402 Sum_probs=246.7
Q ss_pred ccccCCCCCCC---CCCCCCCCc-EEEECCCCCCCCCCCCchhHHHHH--hcCCCeEEEEccCeeEEecc----------
Q 011204 86 RLADCSVGFAQ---GTLGGKGGQ-IYVVTDSSDSDPANPTPGTLRHAV--IQTEPIWITFASNMLIKLKH---------- 149 (491)
Q Consensus 86 ~LA~~a~GfG~---~ttGG~gG~-vy~VTnl~D~~~~~P~pGsLR~Av--~~~~Pr~IvF~~sg~I~L~~---------- 149 (491)
+...+++|||+ +||||++|+ +|+||+++| ||+|+ .+++||+|+ ++|+|++..
T Consensus 3 ~~~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~----------L~~al~~~~~~p~VI~--V~GtI~~~~~~~~~s~~~~ 70 (355)
T 1pcl_A 3 ETDAATTGWATQNGGTTGGAKAAKAVEVKNISD----------FKKALNGTDSSAKIIK--VTGPIDISGGKAYTSFDDQ 70 (355)
T ss_pred ccccCCcceeecCCCCccCCCCceEEEeCCHHH----------HHHHHhhCCCCcEEEE--ECCEEecCCcccccccccc
Confidence 44557899998 899999998 799999987 89999 788999765 567999874
Q ss_pred ----eEEecCCceEEeecceEEEecceEEEEeeeccEEEEeeEEEee---ccCCCccccCCCCccccCcCCCCCceeeeC
Q 011204 150 ----ELIINSYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHC---KPSGNTMIASSPTHVGYRGKSDGDGISIFG 222 (491)
Q Consensus 150 ----~L~V~SnkTI~G~Ga~v~I~Ggg~i~i~~a~NVIIrnL~Ir~~---~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g 222 (491)
+|+|+|||||+|+|..++|.|++ |+|++++|||||||+||+. .|.|++ ..|| .+++|+|+|++
T Consensus 71 ~~~~~l~v~sn~TI~G~G~~~~i~g~g-l~i~~~~NVIIrnl~i~~~~~~~p~~~~-------~~g~--~~~~DaI~i~~ 140 (355)
T 1pcl_A 71 KARSQISIPSNTTIIGVGSNGKFTNGS-LVIKGVKNVILRNLYIETPVDVAPHYES-------GDGW--NAEWDAAVIDN 140 (355)
T ss_pred ccceeEEeCCCeEEEEecCCeEEecCE-EEEecCCeEEEeeeEEEcCccccccccc-------ccCc--cccCceEEecC
Confidence 78899999999999999999986 9999999999999999964 444432 1135 36899999999
Q ss_pred CceEEEEeeEeecC-----------------CCCeeEeeeCCceEEEEcceeccCCceeeeccCCccc-CCCC-eEEEEE
Q 011204 223 SQKIWVDHCSLSYC-----------------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYA-LDMG-MQVTIA 283 (491)
Q Consensus 223 s~nVWIDHcS~S~~-----------------~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~-~D~g-~~VTih 283 (491)
++|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. .|++ ++||||
T Consensus 141 s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~h 220 (355)
T 1pcl_A 141 STNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFH 220 (355)
T ss_pred CCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEE
Confidence 99999999999997 6999999999999999999999999999999999876 7777 999999
Q ss_pred eeEecCCCcccCccccCCeEEEEcceEeC---Cc----ceEeecCCCceEEEeCcEEeCCCCCCCcceeeecccCccccC
Q 011204 284 FNHFGVALVQRMPRCRRGYIHVVNNDFTS---WE----MYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWA 356 (491)
Q Consensus 284 hN~F~~n~~qR~Pr~R~G~vHvvNN~y~n---w~----~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~~~~~~~ 356 (491)
|||| +++.||+||+|+|++|+|||||++ |. +|+++++++++|++|+|||+++ + .|+++++.. +...|+
T Consensus 221 hN~f-~~~~~R~PrvR~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~-~--~~~~~~~~~-~~~~~~ 295 (355)
T 1pcl_A 221 NNVF-DRVTERAPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLS-N--LKSIDGKNP-ECSIVK 295 (355)
T ss_pred CcEE-eCCcccCCceecceEEEEcceEEcccCCCccccceEecCCCCcEEEEEccEEECC-C--ccccccccc-cccccc
Confidence 9999 689999999999999999999974 44 7999999999999999999998 2 367777753 334577
Q ss_pred CCeee--ccCceEEeceEe-eeCCCCCCc-cCCCCCceecC-ChhhH-HHHHhcccCcc
Q 011204 357 GWNWR--TEGDVMVNGAFF-VPSGAGLST-QYAKASSVEPK-SAALI-DQLTMNAGVFG 409 (491)
Q Consensus 357 ~w~w~--s~Gd~~~nGa~f-~~sg~~~~~-~~~~~~~~~~~-~~~~v-~~lt~~AG~~~ 409 (491)
.|+|+ ++.+.++||+.+ ..++.+... .-..+|++++. |++.| ..|+++||+-+
T Consensus 296 ~~~~~~~~~~gn~~~g~~~~~~~~~~~~~~~~~~~y~y~~~~~a~~v~~~V~~~AGag~ 354 (355)
T 1pcl_A 296 QFNSKVFSDKGSLVNGSTTTKLDTCGLTAYKPTLPYKYSAQTMTSSLATSINNNAGYGK 354 (355)
T ss_pred cccCceEEecCccccCcCccccccCCccccccCCCCCccCCCcHHHHHHHHHhccCCCC
Confidence 77766 566678899888 444443321 11236778664 56666 78899999854
No 5
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=100.00 E-value=1.1e-64 Score=515.94 Aligned_cols=285 Identities=27% Similarity=0.397 Sum_probs=233.3
Q ss_pred cCCCCCCC---CCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHh-------cCCCeEEEEccCeeEEec----ceEEec
Q 011204 89 DCSVGFAQ---GTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVI-------QTEPIWITFASNMLIKLK----HELIIN 154 (491)
Q Consensus 89 ~~a~GfG~---~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~-------~~~Pr~IvF~~sg~I~L~----~~L~V~ 154 (491)
++|+|||+ +||||+||++|+||+++| ||+|++ +++||+|+ ++|+|+|+ ++|.|.
T Consensus 2 ~~~~Gfa~~nggTtGG~gG~vv~Vttl~d----------L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~ 69 (326)
T 3vmv_A 2 NGPQGYASMNGGTTGGAGGRVEYASTGAQ----------IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVK 69 (326)
T ss_dssp -CCSGGGGSTTCCCTTTTSEEEEESSHHH----------HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEES
T ss_pred CCCceeeecCCCCccCCCCeEEEECCHHH----------HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEe
Confidence 47899998 699999999999999987 899999 89999998 67899998 899998
Q ss_pred ---------CCceEEeecceEEEecceEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeC-Cc
Q 011204 155 ---------SYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG-SQ 224 (491)
Q Consensus 155 ---------SnkTI~G~Ga~v~I~Ggg~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g-s~ 224 (491)
|||||+|+|+.++|.|.+ |+|++++|||||||+|+++. ..++|+|+|++ ++
T Consensus 70 ~~~~~~~~~sn~TI~G~g~~~~i~G~g-l~i~~a~NVIIrNl~i~~~~------------------~~~~DaI~i~~~s~ 130 (326)
T 3vmv_A 70 NHRGKAHEIKNISIIGVGTNGEFDGIG-IRLSNAHNIIIQNVSIHHVR------------------EGEGTAIEVTDDSK 130 (326)
T ss_dssp CTTCTTSCEEEEEEEECTTCCEEESCC-EEEESEEEEEEESCEEECCC------------------STTSCSEEEETTCE
T ss_pred cccccccCCCCeEEEecCCCeEEeCcE-EEEEecceEEEECeEEEcCC------------------CCCCCeEEEecCCC
Confidence 999999999999999987 99999999999999999863 24789999997 99
Q ss_pred eEEEEeeEeecC---------CCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccC
Q 011204 225 KIWVDHCSLSYC---------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRM 295 (491)
Q Consensus 225 nVWIDHcS~S~~---------~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~ 295 (491)
|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++..+ .++|||||||| +++.||+
T Consensus 131 nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~-~~~vT~~~N~f-~~~~~R~ 208 (326)
T 3vmv_A 131 NVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASLA-PDKITYHHNYF-NNLNSRV 208 (326)
T ss_dssp EEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGGC-CEEEEEESCEE-EEEEECT
T ss_pred cEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCccc-CccEEEEeeEe-cCCcCcC
Confidence 999999999975 499999999999999999999999999999999886542 36999999999 6899999
Q ss_pred ccccCCeEEEEcceEeCCcceEeecCCCceEEEeCcEEeCCCCCCCcceeeecccCcc-ccCCCeeeccCceEEeceEee
Q 011204 296 PRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDES-EWAGWNWRTEGDVMVNGAFFV 374 (491)
Q Consensus 296 Pr~R~G~vHvvNN~y~nw~~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~~~~-~~~~w~w~s~Gd~~~nGa~f~ 374 (491)
||+|+|++|+|||||++|.+|++++++++++++|+|||+++.....+.+...+..+.. .|+ -...|.+.+.|+.|+
T Consensus 209 Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~---s~~~g~~~~~~n~~~ 285 (326)
T 3vmv_A 209 PLIRYADVHMFNNYFKDINDTAINSRVGARVFVENNYFDNVGSGQADPTTGFIKGPVGWFYG---SPSTGYWNLRGNVFV 285 (326)
T ss_dssp TEEESCEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEESCCSBCTTTCCBCSSEECCSC---SSSBCEEEEESCEEE
T ss_pred CcccCCcEEEEccEEECCCceEEeecCCcEEEEEceEEECCcCccccccccccccceeeccC---CCCceEEEEECCeEc
Confidence 9999999999999999999999999999999999999999832111111111111100 111 111233333444444
Q ss_pred eC-CC--CCCccCCCCCceecCChhhH-HHHHhcccCcc
Q 011204 375 PS-GA--GLSTQYAKASSVEPKSAALI-DQLTMNAGVFG 409 (491)
Q Consensus 375 ~s-g~--~~~~~~~~~~~~~~~~~~~v-~~lt~~AG~~~ 409 (491)
.+ +. .....+.++|+|++.|++.| ..|.+.||+-+
T Consensus 286 n~~~~~~~~~~~~~p~Y~y~l~~a~~V~~~V~~~AG~Gk 324 (326)
T 3vmv_A 286 NTPNSHLNSTTNFTPPYSYQVQSATQAKSSVEQHSGVGV 324 (326)
T ss_dssp SSCCTTCCCCCCCCCSSCCCCCCHHHHHHHHHHHCSSSS
T ss_pred cCcCcccCCCccccccCeeecCCHHHhhHHHhccCCCcc
Confidence 33 21 12345778899999998888 78899999875
No 6
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=100.00 E-value=9.1e-65 Score=522.82 Aligned_cols=288 Identities=30% Similarity=0.464 Sum_probs=238.7
Q ss_pred CCCCCC---CCCCCCCCC---cEEEECCCCCCCCCCCCchhHHHHH-hcCCCeEEEEccCeeEEecc-------------
Q 011204 90 CSVGFA---QGTLGGKGG---QIYVVTDSSDSDPANPTPGTLRHAV-IQTEPIWITFASNMLIKLKH------------- 149 (491)
Q Consensus 90 ~a~GfG---~~ttGG~gG---~vy~VTnl~D~~~~~P~pGsLR~Av-~~~~Pr~IvF~~sg~I~L~~------------- 149 (491)
+++||| ++||||++| +||+||+++| ||+|+ .+++||+|++ +|+|+++.
T Consensus 13 ~~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d----------L~~al~~~~~p~vI~V--~GtI~~~~~~~~~s~~~~~~~ 80 (361)
T 1pe9_A 13 PTVGWASQNGFTTGGAAATSDNIYIVTNISE----------FTSALSAGAEAKIIQI--KGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CSSSGGGSSSCCCTTTTCCGGGEEEECSHHH----------HHHHHTTTTSCEEEEE--CSEEETTTTCCCCSHHHHHHH
T ss_pred CCCceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhcCCCcEEEEE--CCEEecCCccccccccccccc
Confidence 589999 499999998 7999999987 89999 8999999875 57999964
Q ss_pred -eEEecCCceEEeecceEEEecceEEEE---eeeccEEEEeeEEEee---ccCCCccccCCCCccccCcCCCCCceeeeC
Q 011204 150 -ELIINSYKTIDGRGANVEITGNGCLTL---QYVSHVIIHNVHIHHC---KPSGNTMIASSPTHVGYRGKSDGDGISIFG 222 (491)
Q Consensus 150 -~L~V~SnkTI~G~Ga~v~I~Ggg~i~i---~~a~NVIIrnL~Ir~~---~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g 222 (491)
+|+|+|||||+|+|..++|.|++ |+| ++++|||||||+||+. .|.|++ ..|| .+++|+|+|++
T Consensus 81 ~~l~v~snkTI~G~G~~~~i~g~g-l~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~-------~~g~--~~~~DaI~i~~ 150 (361)
T 1pe9_A 81 SQINIPANTTVIGLGTDAKFINGS-LIIDGTDGTNNVIIRNVYIQTPIDVEPHYEK-------GDGW--NAEWDAMNITN 150 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEESSE-EEEEGGGTCEEEEEESCEEECCCCSSCEEET-------TTEE--ECCCCSEEEET
T ss_pred eeEEecCCcEEEccCCCeEEecCE-EEEecCCCCceEEEeCeEEEcCccccccccc-------ccCc--ccCCceEEeec
Confidence 79999999999999999999986 999 7999999999999974 332221 1135 36899999999
Q ss_pred -CceEEEEeeEeecC-----------------CCCeeEeeeCCceEEEEcceeccCCceeeeccCCccc-CCCC-eEEEE
Q 011204 223 -SQKIWVDHCSLSYC-----------------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYA-LDMG-MQVTI 282 (491)
Q Consensus 223 -s~nVWIDHcS~S~~-----------------~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~-~D~g-~~VTi 282 (491)
++|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. .|++ |+|||
T Consensus 151 ~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~ 230 (361)
T 1pe9_A 151 GAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTL 230 (361)
T ss_dssp TCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEE
T ss_pred CCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEE
Confidence 99999999999997 6999999999999999999999999999999999876 6776 99999
Q ss_pred EeeEecCCCcccCccccCCeEEEEcceEe---CCc----ceEeecCCCceEEEeCcEEeCCCCC--CCcceeeecccCcc
Q 011204 283 AFNHFGVALVQRMPRCRRGYIHVVNNDFT---SWE----MYAIGGSANPTINSQGNRYTAPPDD--NAKEVTKRVETDES 353 (491)
Q Consensus 283 hhN~F~~n~~qR~Pr~R~G~vHvvNN~y~---nw~----~yaiggs~~~~I~segNyF~~~~~~--~~k~vt~r~~~~~~ 353 (491)
||||| +++.|||||+|+|++|+|||||+ +|. +|+++++++++|++|+|||++++.+ ..+++++
T Consensus 231 hhN~f-~~~~~R~Pr~R~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~~------- 302 (361)
T 1pe9_A 231 FNNVF-NRVTERAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVVK------- 302 (361)
T ss_dssp ESCEE-EEEEECSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGEE-------
T ss_pred ECeEE-cCccccCcccccceEEEEcceEecccCCCccccceEecCCCCcEEEEECCEEECCCCccccCceeEE-------
Confidence 99999 68999999999999999999996 455 7999999999999999999998433 1233433
Q ss_pred ccCCCeeeccCceEEeceEeeeCCCCCCccCC--CCCceecC-ChhhH-HHHHhcccCcc
Q 011204 354 EWAGWNWRTEGDVMVNGAFFVPSGAGLSTQYA--KASSVEPK-SAALI-DQLTMNAGVFG 409 (491)
Q Consensus 354 ~~~~w~w~s~Gd~~~nGa~f~~sg~~~~~~~~--~~~~~~~~-~~~~v-~~lt~~AG~~~ 409 (491)
.|..+.+...| .++||+.+..++.+.. .|. .+|++++. |++.| +.|+++||+-+
T Consensus 303 ~~~~~~~~~~g-n~~~g~~~~~~~~g~~-~~~~~~~y~y~~~~~a~~V~~~V~~~AGag~ 360 (361)
T 1pe9_A 303 KFNGSIFSDNG-SVLNGSAVDLSGCGFS-AYTSKIPYIYDVQPMTTELAQSITDNAGSGK 360 (361)
T ss_dssp ESSCCEEEEES-CEETTEECCCTTSSCB-CCCSCCCSCCCCCCCCHHHHHHHHHHCSTTC
T ss_pred ecCCcEEEecC-ccccCcCcccCCCCcc-ccccCCCCccccCCcHHHHHHHHHhccCCCc
Confidence 34444454444 4679998877655432 343 36888764 55666 78999999854
No 7
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=100.00 E-value=7.2e-63 Score=516.72 Aligned_cols=301 Identities=28% Similarity=0.369 Sum_probs=241.1
Q ss_pred hhccccCCCCCCC---CCCCCCCCc---EEEECCCCCCCCCCCCchhHHHHHhcC--------CCeEEEEccCeeEEecc
Q 011204 84 RQRLADCSVGFAQ---GTLGGKGGQ---IYVVTDSSDSDPANPTPGTLRHAVIQT--------EPIWITFASNMLIKLKH 149 (491)
Q Consensus 84 ~~~LA~~a~GfG~---~ttGG~gG~---vy~VTnl~D~~~~~P~pGsLR~Av~~~--------~Pr~IvF~~sg~I~L~~ 149 (491)
||.|+ .++|||+ +||||++|+ +|+||+++| ||+|+.+. +||+|++ +|+|++..
T Consensus 5 ~~~~~-~~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~~~~~~priI~V--~GtId~~~ 71 (416)
T 1vbl_A 5 HEVLK-PYDGWAAYGEGTTGGAMASPQNVFVVTNRTE----------LIQALGGNNHTNQYNSVPKIIYV--KGTIDLNV 71 (416)
T ss_dssp GCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHTTSCTTGGGGCCSCEEEEE--CSEEESSB
T ss_pred ccccC-CCcceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhccccccccCCCCEEEEE--CCEEeccc
Confidence 56666 6899999 999999995 999999986 89999864 9999995 56999741
Q ss_pred -------------------------------------------------------eEEecCCceEEeecceEEEecceEE
Q 011204 150 -------------------------------------------------------ELIINSYKTIDGRGANVEITGNGCL 174 (491)
Q Consensus 150 -------------------------------------------------------~L~V~SnkTI~G~Ga~v~I~Ggg~i 174 (491)
+|.|+|||||+|+|+.++|.|++ |
T Consensus 72 ~~~g~~~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~g-l 150 (416)
T 1vbl_A 72 DDNNQPVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIKGGG-F 150 (416)
T ss_dssp CTTSCBCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEESCE-E
T ss_pred CCCCccccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEecCE-E
Confidence 68889999999999999999886 9
Q ss_pred EEeeeccEEEEeeEEEee---ccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecC---------------
Q 011204 175 TLQYVSHVIIHNVHIHHC---KPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC--------------- 236 (491)
Q Consensus 175 ~i~~a~NVIIrnL~Ir~~---~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~--------------- 236 (491)
+|++++|||||||+|++. .|+|++.. .....| .+++|+|+|++++|||||||+|+|+
T Consensus 151 ~i~~~~NVIIrNl~i~~~~~~~p~~~p~~---~~~~~~--~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~ 225 (416)
T 1vbl_A 151 LIKNVDNVIIRNIEFEAPLDYFPEWDPTD---GTLGEW--NSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPF 225 (416)
T ss_dssp EEESCEEEEEESCEEECCCCSSCEEETTS---TTTCEE--ECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEEC
T ss_pred EeecCceEEEeCeEEEcCccccccccccc---cccccc--cCCCceEEecCCceEEEEccEEecCCCcccccccccCcce
Confidence 999999999999999874 33333211 011223 4689999999999999999999997
Q ss_pred --CCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCC-eEEEEEeeEecCCCcccCccccCCeEEEEcceEeCC
Q 011204 237 --TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTSW 313 (491)
Q Consensus 237 --~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g-~~VTihhN~F~~n~~qR~Pr~R~G~vHvvNN~y~nw 313 (491)
.||++|+++++++||||||+|++|+|+||+|++|++..|+| |+|||||||| +++.|||||+|+|++|+|||||+++
T Consensus 226 ~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~ 304 (416)
T 1vbl_A 226 QQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYY-KNVTQRLPRVRFGQVHIYNNYYEFS 304 (416)
T ss_dssp CCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEE-EEEEECSSEESSCEEEEESCEEEEC
T ss_pred eecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEe-cCCccCCcccccceEEEEcceEECC
Confidence 59999999999999999999999999999999999888888 9999999999 6899999999999999999999864
Q ss_pred ------cceEeecCCCceEEEeCcEEeCCCCCCCcceeeecccCccccCCCeeeccCceEE--ece-Eee-----e--CC
Q 011204 314 ------EMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWAGWNWRTEGDVMV--NGA-FFV-----P--SG 377 (491)
Q Consensus 314 ------~~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~~~~~~~~w~w~s~Gd~~~--nGa-~f~-----~--sg 377 (491)
.+|+++++++++|++|+|||+++++...++++++... ..-.....|.++. ||+ ... + ..
T Consensus 305 ~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~~~~-----~~~~~~~~gn~~~~~ng~~~~d~~~~~n~~~~ 379 (416)
T 1vbl_A 305 NLADYDFQYAWGVGVFSQIYAQNNYFSFDWDIDPSLIIKVWSK-----NEESMYETGTIVDLPNGRRYIDLVASYNESNT 379 (416)
T ss_dssp TTSSSCCCCSEEEETTCEEEEESCEEEESSCCCGGGSEEEECS-----SCCEEEEESCEEEETTEEEECCHHHHHHHHCS
T ss_pred CCCcccceeEeccCCCcEEEEECCEEECCCCCCccceeeeecc-----CCceEEecCCEEeecCCCcccccccccccCCc
Confidence 3599999999999999999999987666667765311 1112334455553 441 110 0 11
Q ss_pred CCC--CccCCCCCceecCChhhH-HHHHhcccCcc
Q 011204 378 AGL--STQYAKASSVEPKSAALI-DQLTMNAGVFG 409 (491)
Q Consensus 378 ~~~--~~~~~~~~~~~~~~~~~v-~~lt~~AG~~~ 409 (491)
... ...+.|++.+++.|++.| ..|+++||+.+
T Consensus 380 ~~~~~~~~~~P~~~y~~~~a~~V~~~V~~~AGag~ 414 (416)
T 1vbl_A 380 LQLKKEVTWKPMFYHVIHPTPSVPALVKAKAGAGN 414 (416)
T ss_dssp SCCEECCSCCCCCCSCCCCGGGHHHHHHHHCSTTC
T ss_pred ccccCCcccCCccccccCCHHHHHHHHhhccCCCc
Confidence 111 123445567889998888 78999999865
No 8
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=100.00 E-value=8.3e-63 Score=514.01 Aligned_cols=298 Identities=27% Similarity=0.392 Sum_probs=238.1
Q ss_pred hhccccCCCCCCC---CCCCCCCCc---EEEECCCCCCCCCCCCchhHHHHH---hcCCCeEEEEccCeeEEec------
Q 011204 84 RQRLADCSVGFAQ---GTLGGKGGQ---IYVVTDSSDSDPANPTPGTLRHAV---IQTEPIWITFASNMLIKLK------ 148 (491)
Q Consensus 84 ~~~LA~~a~GfG~---~ttGG~gG~---vy~VTnl~D~~~~~P~pGsLR~Av---~~~~Pr~IvF~~sg~I~L~------ 148 (491)
||.|+ .|+|||+ +||||++|+ +|+||+++| |++|+ .+++||+|++ +|+|++.
T Consensus 5 ~~~~~-~a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~priI~v--~GtId~~~~~~g~ 71 (399)
T 2o04_A 5 HQTLG-SNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ----------LVSALGKETNTTPKIIYI--KGTIDMNVDDNLK 71 (399)
T ss_dssp TCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHHCCTTCCSCEEEEE--CSEEESSBCTTCC
T ss_pred ccccC-CCcceeecCCCCcCCCCCccceEEEeCCHHH----------HHHHHHhccCCCCEEEEE--cCEEecccCCccc
Confidence 56666 6899999 999999996 999999986 89999 7899999996 5699874
Q ss_pred -------------------------------------------------ceEEecCCceEEeecceEEEecceEEEEeee
Q 011204 149 -------------------------------------------------HELIINSYKTIDGRGANVEITGNGCLTLQYV 179 (491)
Q Consensus 149 -------------------------------------------------~~L~V~SnkTI~G~Ga~v~I~Ggg~i~i~~a 179 (491)
.+|.|+|||||+|||+.++|.|.+ |+|+.
T Consensus 72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~g-l~i~~- 149 (399)
T 2o04_A 72 PLGLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGN-FQIKS- 149 (399)
T ss_dssp BCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEESCE-EEECS-
T ss_pred cccccccccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEeeCE-EEeeC-
Confidence 268889999999999999999886 99988
Q ss_pred ccEEEEeeEEEee---ccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecC-----------------CCC
Q 011204 180 SHVIIHNVHIHHC---KPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC-----------------TDG 239 (491)
Q Consensus 180 ~NVIIrnL~Ir~~---~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~-----------------~DG 239 (491)
+|||||||+|++. +|+|++... ....| .+++|+|+|++++|||||||+|+|+ .||
T Consensus 150 ~NVIIrnl~i~~~~~~~p~~~p~~~---~~~~~--~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dg 224 (399)
T 2o04_A 150 DNVIIRNIEFQDAYDYFPQWDPTDG---SSGNW--NSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDG 224 (399)
T ss_dssp EEEEEESCEEECCCCSSCEEETTSS---TTCEE--ECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCC
T ss_pred CCEEEeCeEEecCcccccccccccc---ccccc--cCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecccc
Confidence 9999999999874 343332110 01123 3688999999999999999999996 599
Q ss_pred eeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCC-eEEEEEeeEecCCCcccCccccCCeEEEEcceEeCCc----
Q 011204 240 LIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTSWE---- 314 (491)
Q Consensus 240 liDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g-~~VTihhN~F~~n~~qR~Pr~R~G~vHvvNN~y~nw~---- 314 (491)
++|+++++++||||||+|++|+|+||+|++|++..|+| |+||||||+| +++.|||||+|+|++|+|||||++|.
T Consensus 225 l~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f-~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~ 303 (399)
T 2o04_A 225 QTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRY-KNIVQAAPRVRFGQVHVYNNYYEGSTSSSS 303 (399)
T ss_dssp SEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEE-EEEEECTTEESSCEEEEESCEEECCTTCSS
T ss_pred ceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEe-cCCcccCCCcccceEEEEcceEECCCCCCc
Confidence 99999999999999999999999999999999988887 9999999999 67999999999999999999998873
Q ss_pred ---ceEeecCCCceEEEeCcEEeCCCCCCCcceeeecccCc--cccCCCeeeccCceEEeceEeeeCCCCCCccCCCCCc
Q 011204 315 ---MYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDE--SEWAGWNWRTEGDVMVNGAFFVPSGAGLSTQYAKASS 389 (491)
Q Consensus 315 ---~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~~~--~~~~~w~w~s~Gd~~~nGa~f~~sg~~~~~~~~~~~~ 389 (491)
+|+++++++++|++|+|||+++.. ..++++++..... ..+.+|.+.+..|++. +.+..+ ...+.++++
T Consensus 304 ~~~~ya~g~~~~~~i~~e~N~F~~~~~-~~~~~~~~~s~~~~~~~~gn~~~g~~~d~~~--~~~~~~----~~~~~p~~~ 376 (399)
T 2o04_A 304 YPFSYAWGIGKSSKIYAQNNVIDVPGL-SAAKTISVFSGGTALYDSGTLLNGTQINASA--ANGLSS----SVGWTPSLH 376 (399)
T ss_dssp SCCCCSEEECTTCEEEEESCEEECTTC-CSGGGEEECTTCCBCEEESCEETTEECCHHH--HTTCBS----CCSCCCCCC
T ss_pred cceeeEeccCCCcEEEEEceEEECCCC-CccceeeeccCCceEEEeCceecCccccccc--ccccCC----CcccCCccc
Confidence 499999999999999999999844 3557777652111 2234444433333211 111111 123445567
Q ss_pred eecCChhhH-HHHHhcccCcc
Q 011204 390 VEPKSAALI-DQLTMNAGVFG 409 (491)
Q Consensus 390 ~~~~~~~~v-~~lt~~AG~~~ 409 (491)
+++.|++.| ..|+++||+.+
T Consensus 377 y~~~~a~~V~~~V~~~AGag~ 397 (399)
T 2o04_A 377 GSIDASANVKSNVINQAGAGK 397 (399)
T ss_dssp CCCCCHHHHHHHHHHHCSTTS
T ss_pred cccCCHHHHHHhHHhcCCCCc
Confidence 888899989 56779999865
No 9
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=100.00 E-value=5.7e-60 Score=486.00 Aligned_cols=279 Identities=23% Similarity=0.283 Sum_probs=232.9
Q ss_pred CCCCCCC---CCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHhc-----------CCCeEEEEccCeeEEec-------
Q 011204 90 CSVGFAQ---GTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQ-----------TEPIWITFASNMLIKLK------- 148 (491)
Q Consensus 90 ~a~GfG~---~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~~-----------~~Pr~IvF~~sg~I~L~------- 148 (491)
+..||+. +|+|| ..+|+||++++ |++|+++ .+++.+||.++|+|++.
T Consensus 3 ~~~G~at~~Ggt~gg--~~~~tvtt~~~----------L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~ 70 (353)
T 1air_A 3 DTGGYAATAGGNVTG--AVSKTATSMQD----------IVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAAN 70 (353)
T ss_dssp BCSSSCBCCTTCSTT--CEEEEESSHHH----------HHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTS
T ss_pred CCCcceecCCCCCCC--cceEEeCCHHH----------HHHHHHhhccccccccccCCCceEEEEEccEEeccccccccc
Confidence 4689976 45554 46788998864 8999965 34555566667899882
Q ss_pred ---------ceEEe---cCCceEEeecceEEEecceEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCC
Q 011204 149 ---------HELII---NSYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGD 216 (491)
Q Consensus 149 ---------~~L~V---~SnkTI~G~Ga~v~I~Ggg~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgD 216 (491)
.+|.| +|||||+|++++ +.|.+ |+|++++|||||||+||... +...++|
T Consensus 71 ~~~~~~~~~~~~~i~~~~sn~TI~G~~~~--~~g~g-l~i~~~~NVIIrnl~i~~~~----------------~~~~~~D 131 (353)
T 1air_A 71 ICGQWSKDPRGVEIKEFTKGITIIGANGS--SANFG-IWIKKSSDVVVQNMRIGYLP----------------GGAKDGD 131 (353)
T ss_dssp GGGSTTSCCCEEEEESBCSCEEEEECTTC--CBSSE-EEEESCCSEEEESCEEESCS----------------CGGGTCC
T ss_pred cccccccCCCceEEEecCCCEEEEeccCC--CCCce-EEEeccCcEEEeccEEEeCC----------------CCCCCCC
Confidence 56777 599999999876 35664 99999999999999999631 1245899
Q ss_pred ceeeeCCceEEEEeeEeecC-------------CCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEE
Q 011204 217 GISIFGSQKIWVDHCSLSYC-------------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIA 283 (491)
Q Consensus 217 aIsI~gs~nVWIDHcS~S~~-------------~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTih 283 (491)
+|+|++++|||||||+|+|. .||++|+++++++||||||+|++|+|+||+|++|++. +++||||
T Consensus 132 aI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~---g~~vT~h 208 (353)
T 1air_A 132 MIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDT---GRNITYH 208 (353)
T ss_dssp SEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCC---CCEEEEE
T ss_pred eEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCC---CceEEEE
Confidence 99999999999999999985 3999999999999999999999999999999998754 3799999
Q ss_pred eeEecCCCcccCccccCCeEEEEcceEeCCcceEeecCCCceEEEeCcEEeCCCCCCCcceeeeccc-CccccC------
Q 011204 284 FNHFGVALVQRMPRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVET-DESEWA------ 356 (491)
Q Consensus 284 hN~F~~n~~qR~Pr~R~G~vHvvNN~y~nw~~yaiggs~~~~I~segNyF~~~~~~~~k~vt~r~~~-~~~~~~------ 356 (491)
|||| +++.||+||+|+|++|+|||||++|.+|++++++++++++|+|||+++++| ++++.+. ..+.|+
T Consensus 209 hN~f-~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~~~p----~~~~~~~~~~g~~~~~~n~~ 283 (353)
T 1air_A 209 HNYY-NDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAINP----VTSRYDGKNFGTWVLKGNNI 283 (353)
T ss_dssp SCEE-EEEEECSCEEESSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEESS----EEECSSSSSCCEEEEESCSC
T ss_pred ceEE-cCCcCCCCCCcCceEEEEccEEECCCCceeccCCCcEEEEEceEEECCCCc----eEecCCCCCCceeEeccccc
Confidence 9999 678999999999999999999999999999999999999999999998765 5666543 245666
Q ss_pred ---------CCeeeccCceEEeceEeeeCCCCCCccCCCCCceecCChhhHH-HHHhcccCcccC
Q 011204 357 ---------GWNWRTEGDVMVNGAFFVPSGAGLSTQYAKASSVEPKSAALID-QLTMNAGVFGGH 411 (491)
Q Consensus 357 ---------~w~w~s~Gd~~~nGa~f~~sg~~~~~~~~~~~~~~~~~~~~v~-~lt~~AG~~~~~ 411 (491)
+|.|+++++.+++++.|.++|...+ ++|+|++.|++.|+ .|+++||+.+--
T Consensus 284 ~~~~d~~~~~~~~~s~~~~~~~~~~~~~~g~~~~----~~Y~y~~~~a~~V~~~V~~~AGag~~~ 344 (353)
T 1air_A 284 TKPADFSTYSITWTADTKPYVNADSWTSTGTFPT----VAYNYSPVSAQCVKDKLPGYAGVGKNL 344 (353)
T ss_dssp CSTHHHHHHTEECCCCSSCCEECTTCCCCSCCCC----CCSCCCCCCHHHHHHHGGGTSSSSSTT
T ss_pred ccccccceecccccCCCccccccccccccCCccc----cceEEecCCHHHhhhhhhhccCCCccc
Confidence 7999999999999999988765432 46789999999995 999999997643
No 10
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=100.00 E-value=2e-59 Score=482.97 Aligned_cols=285 Identities=20% Similarity=0.226 Sum_probs=224.3
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHhcCCCeEEEEccCeeEEec-----------------
Q 011204 86 RLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLK----------------- 148 (491)
Q Consensus 86 ~LA~~a~GfG~~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~~~~Pr~IvF~~sg~I~L~----------------- 148 (491)
+++.+|+|||++||||++|++|+||+++| ||+|+++++||||+| +|+|+++
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d----------L~~al~~~~prvIvv--~gti~~~~~~G~~t~~~c~~~~~~ 69 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE----------LVSYLGDDEARVIVL--TKTFDFTDSEGTTTGTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CCCCCCccccCCCCCCCCceEEecCCHHH----------HHHHHcCCCceEEEE--CCEEEeccccCccccccccccccc
Confidence 57889999999999999999999999876 899999999999999 5688863
Q ss_pred --------------------------------ceEEecCCceEEeecceEEEecceEEEEe-eeccEEEEeeEEEeeccC
Q 011204 149 --------------------------------HELIINSYKTIDGRGANVEITGNGCLTLQ-YVSHVIIHNVHIHHCKPS 195 (491)
Q Consensus 149 --------------------------------~~L~V~SnkTI~G~Ga~v~I~Ggg~i~i~-~a~NVIIrnL~Ir~~~~~ 195 (491)
.+|.|.|||||+|||++++|.|.+ |+|+ +++|||||||+||++.|
T Consensus 70 ~~~~~~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~G~g-l~i~~~a~NVIIrnL~i~~~~~- 147 (359)
T 1idk_A 70 SACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKG-LRIVSGAENIIIQNIAVTDINP- 147 (359)
T ss_dssp TTBCEEECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCC-EEECTTCEEEEEESCEEEEECT-
T ss_pred cccccccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEecce-EEEecCCCcEEEeCeEEEcccc-
Confidence 469999999999999999999987 9998 89999999999999754
Q ss_pred CCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEe-eeCCceEEEEcceecc------------CCc
Q 011204 196 GNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDA-IMGSTGITISNNYFSH------------HNE 262 (491)
Q Consensus 196 g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv-~~gS~~ITISnn~f~~------------h~k 262 (491)
++. .++|+|+|++++|||||||+|+|+.|++++. ++++++||||||+|++ ++|
T Consensus 148 ----------~~~----~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~ 213 (359)
T 1idk_A 148 ----------KYV----WGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWA 213 (359)
T ss_dssp ----------TEE----TSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCC
T ss_pred ----------ccc----ccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccce
Confidence 222 3789999999999999999999999999986 7889999999999974 358
Q ss_pred eeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccCC-eEEEEcceEeCCcceEeecCCCceEEEeCcEEeCCCCCCC
Q 011204 263 VMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRG-YIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNA 341 (491)
Q Consensus 263 ~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~G-~vHvvNN~y~nw~~yaiggs~~~~I~segNyF~~~~~~~~ 341 (491)
+||+|++| +||||||+|. ++.+|+||+|+| ++|+|||||++|.+|++++++++++++|+|||+++++|..
T Consensus 214 ~~L~G~sd--------~vT~hhN~f~-~~~~R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 214 IYLDGDAD--------LVTMKGNYIY-HTSGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp EEECCSSC--------EEEEESCEEE-SBCSCTTEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEE
T ss_pred EEEEecCC--------CeEEEceEee-cCcccCccccCCceEEEECCEEecccceEEeccCCcEEEEEccEEECCCCcee
Confidence 99999975 8999999995 789999999999 6999999999999999999999999999999999877642
Q ss_pred cceeeecccCccccCCCe-eeccCceEEeceEeeeCCCC------CCccCCCCCceecCChhhH-HHHHhcccCcc
Q 011204 342 KEVTKRVETDESEWAGWN-WRTEGDVMVNGAFFVPSGAG------LSTQYAKASSVEPKSAALI-DQLTMNAGVFG 409 (491)
Q Consensus 342 k~vt~r~~~~~~~~~~w~-w~s~Gd~~~nGa~f~~sg~~------~~~~~~~~~~~~~~~~~~v-~~lt~~AG~~~ 409 (491)
. ..-+..........-. -..-|... ..|.|..||.. ....+.+.+++++.|++.| ..|.++||+-+
T Consensus 285 ~-~~G~~~~~~~~~~~~~c~~~lg~~~-~~N~~~~sg~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~V~~~AG~g~ 358 (359)
T 1idk_A 285 T-YEGEAFTVPSSTAGEVCSTYLGRDC-VINGFGSSGTFSEDSTSFLSDFEGKNIASASAYTSVASRVVANAGQGN 358 (359)
T ss_dssp E-ESSEEECCSSTTGGGGGHHHHSSCC-CCCEEESSCCCCCBCCTTGGGGTTSCCCCCCCGGGHHHHHHHHCSTTC
T ss_pred c-CCCCEEeecCcccchhhhhccCcce-eecccccCCccccCCcccccccCCccccccCCHHHhhhhhhccCCCcc
Confidence 1 0000001000000000 00001111 12334334332 1223444446788888877 69999999854
No 11
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=100.00 E-value=2e-57 Score=468.11 Aligned_cols=280 Identities=24% Similarity=0.313 Sum_probs=220.4
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEECCCCCCCCCCCCchhHHHHHhcCCCeEEEEccCeeEEec-----------------
Q 011204 86 RLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLK----------------- 148 (491)
Q Consensus 86 ~LA~~a~GfG~~ttGG~gG~vy~VTnl~D~~~~~P~pGsLR~Av~~~~Pr~IvF~~sg~I~L~----------------- 148 (491)
++++.|+|||++||||++|++|+||+++| ||+|+++++||+|++ +|+|++.
T Consensus 2 ~~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~----------L~~al~~~~prvIvv--~gtid~~g~~g~~~~~~c~~~~~~ 69 (359)
T 1qcx_A 2 GVVGAAEGFAHGVTGGGSASPVYPTTTDE----------LVSYLGDNEPRVIIL--DQTFDFTGTEGTETTTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CcCCCcceeecCCcCCCCcceEEeCCHHH----------HHHHHcCCCCeEEEE--CcEEeecccccccccccccccccc
Confidence 45678999999999999999999999977 899999999999995 3455431
Q ss_pred --------------------------------ceEEecCCceEEeecceEEEecceEEEEe-eeccEEEEeeEEEeeccC
Q 011204 149 --------------------------------HELIINSYKTIDGRGANVEITGNGCLTLQ-YVSHVIIHNVHIHHCKPS 195 (491)
Q Consensus 149 --------------------------------~~L~V~SnkTI~G~Ga~v~I~Ggg~i~i~-~a~NVIIrnL~Ir~~~~~ 195 (491)
.+|.|.|||||+|+|++++|.|.+ |+|+ +++|||||||+||++.+
T Consensus 70 ~~~~~~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~G~g-l~i~~~a~NVIIrnl~i~~~~~- 147 (359)
T 1qcx_A 70 SQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKG-LRVVSGAKNVIIQNIAVTDINP- 147 (359)
T ss_dssp TTBCEEECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCC-EEEETTCCCEEEESCEEEEECT-
T ss_pred ccccceecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEecce-EEEecCCCCEEEeCcEEEecCC-
Confidence 368899999999999999999987 9998 99999999999999753
Q ss_pred CCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCee-EeeeCCceEEEEcceecc-----------C-Cc
Q 011204 196 GNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLI-DAIMGSTGITISNNYFSH-----------H-NE 262 (491)
Q Consensus 196 g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGli-Dv~~gS~~ITISnn~f~~-----------h-~k 262 (491)
++. .++|+|+|++++|||||||+|+|+.||++ |.++++++||||||+|++ | ++
T Consensus 148 ----------~~~----~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~ 213 (359)
T 1qcx_A 148 ----------KYV----WGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWG 213 (359)
T ss_dssp ----------TEE----TSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCC
T ss_pred ----------ccc----ccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccce
Confidence 222 36899999999999999999999999998 456789999999999973 3 68
Q ss_pred eeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccCC-eEEEEcceEeCCcceEeecCCCceEEEeCcEEeCCCCCCC
Q 011204 263 VMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRG-YIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNA 341 (491)
Q Consensus 263 ~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~G-~vHvvNN~y~nw~~yaiggs~~~~I~segNyF~~~~~~~~ 341 (491)
+||+|++| +||||||+| .++.+||||+|++ ++|+|||||++|.+|++++++++++++|+|||+++++|..
T Consensus 214 ~~l~G~sd--------~vT~~~N~f-~~~~~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 214 VYLDGSND--------MVTLKGNYF-YNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp EEECCSSE--------EEEEESCEE-ESBCSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEEC
T ss_pred eEEecCCC--------CeehcccEe-ccCcccCceecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEECCCcccC
Confidence 99999874 799999999 5789999999986 7999999999999999999999999999999999887643
Q ss_pred cceeeecccCccccCCCee-------eccCceEEeceEeeeCCCCC------CccCCCCCceecCChhhH-HHHHhcccC
Q 011204 342 KEVTKRVETDESEWAGWNW-------RTEGDVMVNGAFFVPSGAGL------STQYAKASSVEPKSAALI-DQLTMNAGV 407 (491)
Q Consensus 342 k~vt~r~~~~~~~~~~w~w-------~s~Gd~~~nGa~f~~sg~~~------~~~~~~~~~~~~~~~~~v-~~lt~~AG~ 407 (491)
.+...+. |....- ..-|...+ .|.|..||... ...|.+..++++.|++.| ..|.++||+
T Consensus 285 ~~~~g~~------f~~~~~~~~~~c~~~lgr~~~-~N~~~~sg~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~V~~~AG~ 357 (359)
T 1qcx_A 285 TPISGQL------FSSPDANTNQQCASVFGRSCQ-LNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKNAGQ 357 (359)
T ss_dssp SSCSSEE------ECCCSHHHHGGGHHHHSSCCC-CCEEESCCCCCCBCGGGGGGGTTSCCCCCCCGGGHHHHHHHHSST
T ss_pred cCCCCce------eecccccccchhhhccCcccc-ccccccCCcccCCCcccccccCCccccccccHHHhhhhhhccCCC
Confidence 2110000 110000 00011111 13444454321 123333336788888877 689999998
Q ss_pred cc
Q 011204 408 FG 409 (491)
Q Consensus 408 ~~ 409 (491)
-+
T Consensus 358 gk 359 (359)
T 1qcx_A 358 GK 359 (359)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 12
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=98.84 E-value=1.2e-07 Score=103.46 Aligned_cols=127 Identities=17% Similarity=0.168 Sum_probs=87.2
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeC------CceEEEEeeEeecCCCCeeEeeeC
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG------SQKIWVDHCSLSYCTDGLIDAIMG 246 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g------s~nVWIDHcS~S~~~DGliDv~~g 246 (491)
+|.+..++||.|++|+++++. ..+..+.. +. ..|++.+++ ++||||++|.+....|..|.+ +.
T Consensus 136 lI~f~~c~NV~I~gVti~NSp-~~gI~I~~-~~--------~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaI-ks 204 (609)
T 3gq8_A 136 NLSIRACHNVYIRDIEAVDCT-LHGIDITC-GG--------LDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITT-HH 204 (609)
T ss_dssp SEEEESCEEEEEEEEEEESCS-SCSEEEEC-SS--------SSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEE-CS
T ss_pred EEEEEeeceEEEEeeEEEeCC-CCCeEEeC-CC--------CCccccCCCccccccceeEEEEeeEEEecCCCEEEe-cC
Confidence 477889999999999999863 22222322 10 126777776 999999999998877777765 67
Q ss_pred CceEEEEcceeccCC-----ceeeeccCCcccCCCCeEEEEEeeEecCCCcccCcccc-C---C---eEEEEcce-EeCC
Q 011204 247 STGITISNNYFSHHN-----EVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-R---G---YIHVVNND-FTSW 313 (491)
Q Consensus 247 S~~ITISnn~f~~h~-----k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R-~---G---~vHvvNN~-y~nw 313 (491)
+++|+|+||++.++. ..+-+|.. ..+|++.+|.| .+ ..|.=|++ + + .+|+.||+ +.++
T Consensus 205 seNI~I~Nc~~~gp~G~S~~~GIsIGsg-------s~NVtV~Nc~i-~n-t~~GIrIKt~~~~~~v~NV~I~n~vs~~nv 275 (609)
T 3gq8_A 205 SQYINILNCYSHDPRLTANCNGFEIDDG-------SRHVVLSNNRS-KG-CYGGIEIKAHGDAPAAYNISINGHMSVEDV 275 (609)
T ss_dssp CEEEEEESCEEECCSSCSSCCSEEECTT-------CEEEEEESEEE-ES-SSEEEEEEECTTSCCCEEEEEEEEEEESCS
T ss_pred CeeEEEEeEEEECCCCCCCcccEEccCC-------cccEEEEeeEE-EC-CCCEEEEEecCCCCccccEEEECCEeecCc
Confidence 999999999996542 22333311 16999999999 44 34554543 1 1 58999987 4566
Q ss_pred cceEee
Q 011204 314 EMYAIG 319 (491)
Q Consensus 314 ~~yaig 319 (491)
.+|.+.
T Consensus 276 rsyn~r 281 (609)
T 3gq8_A 276 RSYNFR 281 (609)
T ss_dssp EEEEEE
T ss_pred eEecce
Confidence 666554
No 13
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.79 E-value=1.7e-07 Score=104.07 Aligned_cols=127 Identities=17% Similarity=0.164 Sum_probs=86.6
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeC------CceEEEEeeEeecCCCCeeEeeeC
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG------SQKIWVDHCSLSYCTDGLIDAIMG 246 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g------s~nVWIDHcS~S~~~DGliDv~~g 246 (491)
+|.+..++||.|++|+++++. ..+..+.. | .+.|+|.+++ |+||||++|.++.+.|..|.+ +.
T Consensus 136 lI~f~~ckNV~I~gVti~NSp-~~gI~I~n-p--------~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAI-ks 204 (772)
T 3gqn_A 136 NLSIRACHNVYIRDIEAVDCT-LHGIDITC-G--------GLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITT-HH 204 (772)
T ss_dssp SEEEESCEEEEEEEEEEESCS-SCSEEEEC-S--------SSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEE-CS
T ss_pred EEEEEeeceEEEEeEEEEeCC-CCCEEEeC-C--------CcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEe-cC
Confidence 477889999999999999863 22222322 1 0126676666 999999999998877777765 67
Q ss_pred CceEEEEcceeccCC-----ceeeeccCCcccCCCCeEEEEEeeEecCCCcccCcccc-C---C---eEEEEcceEe-CC
Q 011204 247 STGITISNNYFSHHN-----EVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-R---G---YIHVVNNDFT-SW 313 (491)
Q Consensus 247 S~~ITISnn~f~~h~-----k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R-~---G---~vHvvNN~y~-nw 313 (491)
+++|+|+||++.++. ..+-+|.. ..+|++.+|.| .+ ..|.=|++ + + .+|+.||+.+ ++
T Consensus 205 SeNI~I~Nc~c~gphG~S~~~GIsIGsg-------s~NVtV~Nc~~-~n-T~nGIRIKt~~~gg~v~NV~I~gnis~~dv 275 (772)
T 3gqn_A 205 SQYINILNCYSHDPRLTANCNGFEIDDG-------SRHVVLSNNRS-KG-CYGGIEIKAHGDAPAAYNISINGHMSVEDV 275 (772)
T ss_dssp CEEEEEESCEEECCSSSSSCCSEEECTT-------CEEEEEEEEEE-ES-SSEEEEECCCTTSCCCEEEEEEEEEEESCS
T ss_pred CceEEEEeEEEECCCCCCCcccEEecCC-------cccEEEEceEE-EC-CCcEEEEEEeCCCCccccEEEECCEEeccC
Confidence 999999999996543 22233311 16999999999 44 34444443 1 1 5889988854 55
Q ss_pred cceEee
Q 011204 314 EMYAIG 319 (491)
Q Consensus 314 ~~yaig 319 (491)
.+|.+.
T Consensus 276 rsynir 281 (772)
T 3gqn_A 276 RSYNFR 281 (772)
T ss_dssp EEEEEC
T ss_pred eEecce
Confidence 555543
No 14
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.37 E-value=2.7e-05 Score=78.77 Aligned_cols=154 Identities=10% Similarity=0.034 Sum_probs=93.4
Q ss_pred eeccEEEEeeEEEeeccCCCccccCCCCcccc----CcCCCCCceeeeCCceEEEEeeE-eecCCCCeeEeeeCCceEEE
Q 011204 178 YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGY----RGKSDGDGISIFGSQKIWVDHCS-LSYCTDGLIDAIMGSTGITI 252 (491)
Q Consensus 178 ~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~----r~~~dgDaIsI~gs~nVWIDHcS-~S~~~DGliDv~~gS~~ITI 252 (491)
.++|+.|++++|++... +...+..+....-. ......|||.+..++++.|.+|. +....||. ++..++++++|
T Consensus 132 ~~~nv~I~~~~i~n~~~-~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI-~~~~~s~~v~I 209 (377)
T 2pyg_A 132 ADRDVTIERVEVREMSG-YGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGF-NVVTSTHDFVM 209 (377)
T ss_dssp CEEEEEEEEEEEECCSS-CSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSE-EEETTCEEEEE
T ss_pred cccceEEEeEEEEeccc-ceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcE-EEEeccCCeEE
Confidence 46788888888887531 11111110000000 01256799999999999999994 44556665 56666999999
Q ss_pred EcceeccCCc-eeee--ccCCcccCCCCeEEEEEeeEecCCCcccCcccc-CCeEEEEcceEeCCcceEeecCCCceEEE
Q 011204 253 SNNYFSHHNE-VMLL--GHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEMYAIGGSANPTINS 328 (491)
Q Consensus 253 Snn~f~~h~k-~mL~--G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R-~G~vHvvNN~y~nw~~yaiggs~~~~I~s 328 (491)
++|.+.+... ..++ |+.+.. ...++++.+|.+..+ ..+-..+. ...+.+.||.+++-..+++-......+.+
T Consensus 210 ~nN~i~~~~~g~~~~~~g~~~~~---~s~nv~i~~N~~~~n-~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g~~~~~i 285 (377)
T 2pyg_A 210 TNNVAYGNGSSGLVVQRGLEDLA---LPSNILIDGGAYYDN-AREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQI 285 (377)
T ss_dssp ESCEEESCSSCSEEEECCSSCCC---CCEEEEEESCEEESC-SSCSEEEEEEEEEEEESCEEESCSSCSEEEEEEEEEEE
T ss_pred ECCEEECccCceEEEeccccCCC---CCccEEEECCEEEcC-ccCceEeccccCeEEECCEEECCCCceEEEecCCCcEE
Confidence 9999987544 3333 333221 125899999987433 22222222 23578999998875444443222457888
Q ss_pred eCcEEeCCC
Q 011204 329 QGNRYTAPP 337 (491)
Q Consensus 329 egNyF~~~~ 337 (491)
++|.|....
T Consensus 286 ~~N~i~~n~ 294 (377)
T 2pyg_A 286 LDNQIHDNA 294 (377)
T ss_dssp ESCEEESCC
T ss_pred ECcEEECCc
Confidence 999998643
No 15
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.20 E-value=1.6e-05 Score=81.80 Aligned_cols=100 Identities=16% Similarity=0.146 Sum_probs=75.2
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeee-----CCc
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIM-----GST 248 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~-----gS~ 248 (491)
+.+..++||.|+|++|+... .....|||.+..|+||+|++|.+....|. |.++. .+.
T Consensus 177 i~~~~~~~v~i~~v~I~~~~-----------------~~~NtDGid~~~s~nV~I~n~~i~~gDDc-Iaiks~~~~~~s~ 238 (376)
T 1bhe_A 177 VVFSDGDGFTAWKTTIKTPS-----------------TARNTDGIDPMSSKNITIAYSNIATGDDN-VAIKAYKGRAETR 238 (376)
T ss_dssp EEEESCEEEEEEEEEEECCT-----------------TCSSCCSEEEESCEEEEEESCEEECSSCS-EEEEECTTSCCEE
T ss_pred EEEeCCCcEEEEeEEEECCC-----------------CCCCCceEeecCCceEEEEeCEEecCCCe-EEEcccCCCCCce
Confidence 66778999999999998521 12367999999999999999999876555 55663 789
Q ss_pred eEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc
Q 011204 249 GITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC 298 (491)
Q Consensus 249 ~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~ 298 (491)
+|+|+||.+..... +-+|+..+ .-.+|++.+|.| .+ .++.-|+
T Consensus 239 nI~I~n~~~~~ghG-isiGSe~~----~v~nV~v~n~~~-~~-t~~GirI 281 (376)
T 1bhe_A 239 NISILHNDFGTGHG-MSIGSETM----GVYNVTVDDLKM-NG-TTNGLRI 281 (376)
T ss_dssp EEEEEEEEECSSSC-EEEEEEES----SEEEEEEEEEEE-ES-CSEEEEE
T ss_pred EEEEEeeEEEcccc-EEeccCCc----cEeeEEEEeeEE-eC-CCcEEEE
Confidence 99999999986443 56776422 126999999999 44 3344444
No 16
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=98.19 E-value=1.3e-05 Score=87.69 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=71.8
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeC-------
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMG------- 246 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~g------- 246 (491)
|.+..++||.|+|++|.... ....|||.+.+|+||+|++|.+... |..|.++.+
T Consensus 357 i~~~~~~nv~i~~v~i~~~~------------------~~NtDGidi~~s~nV~I~n~~i~~g-DD~Iaiksg~~~~g~~ 417 (608)
T 2uvf_A 357 IMNLENHNVVANGLIHQTYD------------------ANNGDGIEFGNSQNVMVFNNFFDTG-DDCINFAAGTGEKAQE 417 (608)
T ss_dssp EEEESCEEEEEESCEEECTT------------------CTTCCSEEEESCEEEEEESCEEECS-SCSEEEECCCSGGGGG
T ss_pred EEEecCCCEEEeeEEEcCCC------------------CCCCCeEEecCCceEEEEeeEEecC-CceEEecCCcCccccc
Confidence 67778999999999986410 2357999999999999999999976 445555543
Q ss_pred ---CceEEEEcceeccCCceeeeccCCcccCCCC-eEEEEEeeEec
Q 011204 247 ---STGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (491)
Q Consensus 247 ---S~~ITISnn~f~~h~k~mL~G~sds~~~D~g-~~VTihhN~F~ 288 (491)
+++|+|+||++........+|+..+ .+ .+|++.+|.|.
T Consensus 418 ~~~s~nI~I~n~~~~~ghg~~~iGS~~~----~~v~nI~v~n~~~~ 459 (608)
T 2uvf_A 418 QEPMKGAWLFNNYFRMGHGAIVTGSHTG----AWIEDILAENNVMY 459 (608)
T ss_dssp SCCEEEEEEESCEECSSSCSEEEESCCT----TCEEEEEEESCEEE
T ss_pred cccccCEEEEeEEEeCCCCeEEEcccCC----CCEEEEEEEeEEEE
Confidence 7899999999998666555887422 23 68999999994
No 17
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.17 E-value=1.7e-05 Score=80.68 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=74.8
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITIS 253 (491)
|.+..++||.|+|++|.... ++. ......|||.+..++||+|.+|.+....|. +.++ .+.+|+|+
T Consensus 126 i~i~~~~nv~i~~~~I~~~~--~d~-----------~~~~ntDGid~~~s~nV~I~n~~i~~gDDc-iaik-sg~nI~i~ 190 (339)
T 2iq7_A 126 FSINSATTLGVYDVIIDNSA--GDS-----------AGGHNTDAFDVGSSTGVYISGANVKNQDDC-LAIN-SGTNITFT 190 (339)
T ss_dssp EEEESCEEEEEESCEEECGG--GGG-----------TTCCSCCSEEEESCEEEEEESCEEECSSCS-EEES-SEEEEEEE
T ss_pred EEEeccCCEEEEEEEEECCc--ccc-----------ccCCCCCcEEEcCcceEEEEecEEecCCCE-EEEc-CCccEEEE
Confidence 66777888888888887521 000 002467999999999999999999987665 4554 45999999
Q ss_pred cceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc
Q 011204 254 NNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC 298 (491)
Q Consensus 254 nn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~ 298 (491)
||.+..... +.+|+-..+....-.+|++.++.| .+ ..+.-|+
T Consensus 191 n~~~~~ghG-isiGSlg~~~~~~v~nV~v~n~~~-~~-~~~girI 232 (339)
T 2iq7_A 191 GGTCSGGHG-LSIGSVGGRSDNTVKTVTISNSKI-VN-SDNGVRI 232 (339)
T ss_dssp SCEEESSCC-EEEEEESSSSCCEEEEEEEEEEEE-ES-CSEEEEE
T ss_pred eEEEECCce-EEECcCCcccCCCEEEEEEEeeEE-EC-CCcEEEE
Confidence 999998654 667774322211127999999999 44 3343344
No 18
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.16 E-value=1.9e-05 Score=80.39 Aligned_cols=107 Identities=14% Similarity=0.153 Sum_probs=74.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITIS 253 (491)
|.+..++||.|+|++|.... ++. ......|||.+..++||+|.+|.++...|. +.++ .+.+|+|+
T Consensus 130 i~i~~~~nv~i~~~~I~~~~--~d~-----------~~~~ntDGid~~~s~nV~I~n~~i~~gDDc-Iaik-sg~nI~i~ 194 (339)
T 1ia5_A 130 FSVAGSDYLTLKDITIDNSD--GDD-----------NGGHNTDAFDIGTSTYVTISGATVYNQDDC-VAVN-SGENIYFS 194 (339)
T ss_dssp EEEESCEEEEEESCEEECGG--GTT-----------TTCCSCCSEEEESCEEEEEESCEEECSSCS-EEES-SEEEEEEE
T ss_pred EEEecccCeEEeeEEEECCc--ccc-----------ccCCCCCcEEecCCceEEEEeeEEEcCCCe-EEEe-CCeEEEEE
Confidence 66777888888888887521 100 002367999999999999999999977665 5554 45999999
Q ss_pred cceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc
Q 011204 254 NNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC 298 (491)
Q Consensus 254 nn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~ 298 (491)
||.+..... +.+|+...+....-.+|++.++.|. + ..+.-|+
T Consensus 195 n~~~~~ghG-isiGS~g~~~~~~v~nV~v~n~~~~-~-t~~girI 236 (339)
T 1ia5_A 195 GGYCSGGHG-LSIGSVGGRSDNTVKNVTFVDSTII-N-SDNGVRI 236 (339)
T ss_dssp SCEEESSSC-EEEEEECSSSCCEEEEEEEEEEEEE-S-CSEEEEE
T ss_pred eEEEECCce-EEECcCCcccCCCEEEEEEEeeEEE-C-CCcEEEE
Confidence 999997654 6677743332111279999999994 4 3444344
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=98.15 E-value=2.3e-05 Score=82.94 Aligned_cols=118 Identities=19% Similarity=0.202 Sum_probs=82.2
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeC-------
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMG------- 246 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~g------- 246 (491)
+.+..++||.|+||+|... ....|||.+..|+||+|++|.+.. .|..|.++.+
T Consensus 216 i~~~~~~nv~i~~v~I~~~-------------------~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~dg~~ 275 (448)
T 3jur_A 216 IHPVLSENVIIRNIEISST-------------------GPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDADGRR 275 (448)
T ss_dssp EEEESCEEEEEESCEEEEC-------------------STTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHHHHH
T ss_pred EeeeccCCEEEEeEEEeec-------------------cCCCccccccCCcCEEEEeeEEEe-CCCcEEeccCccccccc
Confidence 6777899999999999862 125799999999999999999997 4556667666
Q ss_pred ----CceEEEEccee--ccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccC--C-eEEEEcceEeCCcce
Q 011204 247 ----STGITISNNYF--SHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRR--G-YIHVVNNDFTSWEMY 316 (491)
Q Consensus 247 ----S~~ITISnn~f--~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~--G-~vHvvNN~y~nw~~y 316 (491)
+++|+|+||.+ .......-+|+.-+ ..-.+|++.++.| .+ .++.=|++- | --.+-|-.|+|..+.
T Consensus 276 ~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~---~~v~nV~v~n~~~-~~-t~~GirIKt~~g~gG~v~nI~f~ni~m~ 349 (448)
T 3jur_A 276 IGVPSEYILVRDNLVISQASHGGLVIGSEMS---GGVRNVVARNNVY-MN-VERALRLKTNSRRGGYMENIFFIDNVAV 349 (448)
T ss_dssp HCCCEEEEEEESCEEECSSCSEEEEECSSCT---TCEEEEEEESCEE-ES-CSEEEEEECCTTTCSEEEEEEEESCEEE
T ss_pred cCCCceeEEEEEeEEecCCCcceEEECCccc---CcEEEEEEEEEEE-ec-ccceEEEEEEcCCCceEeeEEEEEEEEE
Confidence 79999999999 43333567787532 1127999999999 44 334444321 1 123444445555443
No 20
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.12 E-value=0.0003 Score=73.33 Aligned_cols=131 Identities=13% Similarity=0.104 Sum_probs=83.6
Q ss_pred CCCcEEEEC-CCCCCCCCCCC-----chhHHHHHhcCCC-eEEEEccCeeEE--ec----ceEEec-C-----CceEEee
Q 011204 102 KGGQIYVVT-DSSDSDPANPT-----PGTLRHAVIQTEP-IWITFASNMLIK--LK----HELIIN-S-----YKTIDGR 162 (491)
Q Consensus 102 ~gG~vy~VT-nl~D~~~~~P~-----pGsLR~Av~~~~P-r~IvF~~sg~I~--L~----~~L~V~-S-----nkTI~G~ 162 (491)
...+.|+|. +-+|. +++ |-||.+|+.+-.| -+|++ ..|+.+ +. ..|.+. + .+||.|.
T Consensus 12 ~~~~~~yVsp~Gsd~---~~G~t~~~P~tiq~Ai~~a~pGdtI~l-~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~ 87 (400)
T 1ru4_A 12 STKRIYYVAPNGNSS---NNGSSFNAPMSFSAAMAAVNPGELILL-KPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAA 87 (400)
T ss_dssp CCSCEEEECTTCCTT---CCSSSTTSCBCHHHHHHHCCTTCEEEE-CSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEG
T ss_pred cCccEEEEcCCCCCC---CCCccccCCccHHHHHhhCCCCCEEEE-CCCeEccccccccceeEEecCCCCCCCCEEEEEe
Confidence 345677775 33332 223 4499999987555 34444 467766 33 345552 3 3889887
Q ss_pred c-ceEEEecc----------eEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEee
Q 011204 163 G-ANVEITGN----------GCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHC 231 (491)
Q Consensus 163 G-a~v~I~Gg----------g~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHc 231 (491)
+ ..+.|.++ ..|+| .+++|.|++|+|++.. ..||.+.+ +++.|++|
T Consensus 88 ~g~~~vI~~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g---------------------~~GI~v~g-s~~~i~n~ 144 (400)
T 1ru4_A 88 NCGRAVFDFSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAG---------------------YQGAYVIG-SHNTFENT 144 (400)
T ss_dssp GGCCEEEECCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCS---------------------SCSEEECS-SSCEEESC
T ss_pred cCCCCEEeCCccCCccccceeEEEE-ECCeEEEEeEEEEeCC---------------------CCcEEEeC-CCcEEEeE
Confidence 4 34566411 22777 7899999999998631 12787776 66778888
Q ss_pred EeecCCCCeeEeeeCCceEEEEcceecc
Q 011204 232 SLSYCTDGLIDAIMGSTGITISNNYFSH 259 (491)
Q Consensus 232 S~S~~~DGliDv~~gS~~ITISnn~f~~ 259 (491)
.|....|.-|.+...+.+.+|.+|.+.+
T Consensus 145 ~i~~n~~~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 145 AFHHNRNTGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp EEESCSSCSEEECTTCCSCEEESCEEEC
T ss_pred EEECCCceeEEEEcccCCeEEEceEEEc
Confidence 8888877444454445577888888764
No 21
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.09 E-value=2e-05 Score=82.43 Aligned_cols=190 Identities=16% Similarity=0.141 Sum_probs=123.5
Q ss_pred EEEEccCeeEEecceEEec-CCceEEeecceEE---Ee------c-------ceEEEEeee-----------------cc
Q 011204 136 WITFASNMLIKLKHELIIN-SYKTIDGRGANVE---IT------G-------NGCLTLQYV-----------------SH 181 (491)
Q Consensus 136 ~IvF~~sg~I~L~~~L~V~-SnkTI~G~Ga~v~---I~------G-------gg~i~i~~a-----------------~N 181 (491)
+|+. ..|+-+|+.++.|. |++||.|.+.+++ |. | +..|++..+ ++
T Consensus 59 vI~L-~~G~Y~l~g~ivIdkp~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~ 137 (410)
T 2inu_A 59 AIII-PPGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSG 137 (410)
T ss_dssp EEEC-CSEEEEECSCEEECCTTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEEC
T ss_pred EEEE-CCCeeccCCcEEEecCcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCC
Confidence 3344 45788888999995 6699999875443 55 2 223555444 88
Q ss_pred EEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeC-CceEEEEeeEeecCCCCeeEeeeCCceEEEEcceecc-
Q 011204 182 VIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG-SQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSH- 259 (491)
Q Consensus 182 VIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~g-s~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~- 259 (491)
|.|++++|+++.-.. .|.....+.-||.+.. ++++.|.+|.|....-|.. .+++++++|.+|.+.+
T Consensus 138 V~~~~v~I~G~~~~~----------~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~--l~~a~~~~I~~N~I~e~ 205 (410)
T 2inu_A 138 IVFRDFCLDGVGFTP----------GKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALI--VRGADALRVNDNMIAEC 205 (410)
T ss_dssp CEEESCEEECCCCSS----------STTSCCCSCEEEEECSCEESCEEESCEEESCSEEEE--ETTEESCEEESCEEESS
T ss_pred cEECCEEEECCEeec----------CCCCcccCceeEEEeccCCeEEEECCEEecccEEEE--EccCCCcEEECCEEEec
Confidence 999999998763111 1111234455688875 8899999999999999984 5899999999999995
Q ss_pred CCceeeeccCCc--------ccCCCC--eEEEE-EeeEecCCCcccCccccCCe-------EEEEcceEeCCc-ceEeec
Q 011204 260 HNEVMLLGHNDK--------YALDMG--MQVTI-AFNHFGVALVQRMPRCRRGY-------IHVVNNDFTSWE-MYAIGG 320 (491)
Q Consensus 260 h~k~mL~G~sds--------~~~D~g--~~VTi-hhN~F~~n~~qR~Pr~R~G~-------vHvvNN~y~nw~-~yaigg 320 (491)
.+...|+|.+.. ...++| ..+.. ++|++..| ...|+.|+|. ..+.||.+.+.. .+.+-.
T Consensus 206 GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N--~i~~~~R~gIh~m~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 206 GNCVELTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGN--NLFPRGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp SEEEEECSCEESCEEESCEEECCTTSEEEEEESEESCEEESC--EECSCSSEEEEEESCBSCEEESCEEEESSSCSEEEE
T ss_pred CCceeeccccccceEecceeeecCCCCEEEEEeCCCCEEECC--CcccCcceEEEEEccCCCEEECCEEecceeEEEEEE
Confidence 355677772211 123445 55554 56777433 3447778662 357888887642 122222
Q ss_pred CCCceEEEeCcEEeCCCCCC
Q 011204 321 SANPTINSQGNRYTAPPDDN 340 (491)
Q Consensus 321 s~~~~I~segNyF~~~~~~~ 340 (491)
+......+++|.|.....+.
T Consensus 284 s~~~~n~v~~N~f~~~~~g~ 303 (410)
T 2inu_A 284 NGCKENLITANHIRRTNEGY 303 (410)
T ss_dssp SSCBSCEEESCEEEEECCCS
T ss_pred cCCCCCEEECCEEeccCCce
Confidence 22235777999999655443
No 22
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=98.05 E-value=3.2e-05 Score=78.52 Aligned_cols=106 Identities=17% Similarity=0.240 Sum_probs=74.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITIS 253 (491)
|.+. ++||.|+|++|.... ++. ......|||.+..++||+|.+|.+....|. +.++ .+.+|+|+
T Consensus 126 i~i~-~~nv~i~~~~I~~~~--~d~-----------~~~~ntDGidi~~s~nV~I~n~~i~~gDDc-iaik-sg~nI~i~ 189 (336)
T 1nhc_A 126 ISVQ-ATNVHLNDFTIDNSD--GDD-----------NGGHNTDGFDISESTGVYISGATVKNQDDC-IAIN-SGESISFT 189 (336)
T ss_dssp EEEE-EEEEEEESCEEECTT--HHH-----------HTCCSCCSEEECSCEEEEEESCEEESSSEE-EEES-SEEEEEEE
T ss_pred EEEE-eCCEEEEEEEEECCC--ccc-----------ccCCCCCcEEecCCCeEEEEeCEEEcCCCE-EEEe-CCeEEEEE
Confidence 7787 999999999998521 000 002367999999999999999999887664 4554 45999999
Q ss_pred cceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc
Q 011204 254 NNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC 298 (491)
Q Consensus 254 nn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~ 298 (491)
||++..... +.+|+...+....-.+|++.++.| .+ ..+.-|+
T Consensus 190 n~~~~~ghG-isiGS~g~~~~~~v~nV~v~n~~~-~~-t~~girI 231 (336)
T 1nhc_A 190 GGTCSGGHG-LSIGSVGGRDDNTVKNVTISDSTV-SN-SANGVRI 231 (336)
T ss_dssp SCEEESSSE-EEEEEESSSSCCEEEEEEEEEEEE-ES-CSEEEEE
T ss_pred eEEEECCcC-ceEccCccccCCCEEEEEEEeeEE-EC-CCcEEEE
Confidence 999997654 667774333111126999999999 44 3343344
No 23
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=98.01 E-value=0.00017 Score=75.60 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=66.0
Q ss_pred CCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcc
Q 011204 214 DGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQ 293 (491)
Q Consensus 214 dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~q 293 (491)
..|||.+.. +||+|.+|.+.... ..|.++.++.+|+|+||.+.... ..-+|+...+. .-.+|++.+|.| .+ ..
T Consensus 175 ntDGidi~~-~nV~I~n~~i~~gD-D~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~~--~v~nV~v~n~~~-~~-~~ 247 (422)
T 1rmg_A 175 GLDGIDVWG-SNIWVHDVEVTNKD-ECVTVKSPANNILVESIYCNWSG-GCAMGSLGADT--DVTDIVYRNVYT-WS-SN 247 (422)
T ss_dssp TCCSEEEEE-EEEEEEEEEEESSS-EEEEEEEEEEEEEEEEEEEESSS-EEEEEEECTTE--EEEEEEEEEEEE-ES-SS
T ss_pred CCccEeecC-CeEEEEeeEEeCCC-CeEEeCCCCcCEEEEeEEEcCCc-ceeecccCCCC--cEEEEEEEeEEE-ec-cc
Confidence 589999999 99999999998664 45677778999999999998765 45566632111 116899999999 44 23
Q ss_pred cCcccc--CCeEEEEcceEeCCcceE
Q 011204 294 RMPRCR--RGYIHVVNNDFTSWEMYA 317 (491)
Q Consensus 294 R~Pr~R--~G~vHvvNN~y~nw~~ya 317 (491)
+.=|++ .|.-.+-|-.|+|..+..
T Consensus 248 ~Gi~Ikt~~g~G~v~nI~~~NI~~~~ 273 (422)
T 1rmg_A 248 QMYMIKSNGGSGTVSNVLLENFIGHG 273 (422)
T ss_dssp CSEEEEEBBCCEEEEEEEEEEEEEEE
T ss_pred eEEEEEecCCCcEEEEEEEEeEEEEC
Confidence 333443 233344444566655433
No 24
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=98.00 E-value=6.5e-05 Score=76.76 Aligned_cols=105 Identities=18% Similarity=0.191 Sum_probs=72.2
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCcc-ccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTM-IASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITI 252 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~-v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITI 252 (491)
|.+..++||.|+|++|.... ++.. ... .. .-.....|||.+..++||+|.+|.+....| .|.++ .+++|+|
T Consensus 130 i~i~~~~nv~i~~~~I~~~~--~~~~~~~~--~~--~~~~~NtDGid~~~s~nV~I~n~~i~~gDD-cIaik-sg~nI~i 201 (349)
T 1hg8_A 130 FDITGSSQLTISGLILDNRA--GDKPNAKS--GS--LPAAHNTDGFDISSSDHVTLDNNHVYNQDD-CVAVT-SGTNIVV 201 (349)
T ss_dssp EEEESCEEEEEEEEEEECGG--GSSCCTTT--TT--SCSCCSCCSEEEESCEEEEEEEEEEECSSC-SEEES-SEEEEEE
T ss_pred EEEeccCCEEEEEEEEECCC--Cccccccc--cc--cccCCCCCeEEEccccEEEEEeeEEecCCC-eEEee-CCeEEEE
Confidence 77888999999999998631 1000 000 00 000246799999999999999999997655 45654 4699999
Q ss_pred EcceeccCCceeeeccCCcccCCCC-eEEEEEeeEec
Q 011204 253 SNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (491)
Q Consensus 253 Snn~f~~h~k~mL~G~sds~~~D~g-~~VTihhN~F~ 288 (491)
++|.+..... +-+|+.-.+ ...+ .+|++.+|.|.
T Consensus 202 ~n~~~~~ghG-isiGS~G~~-~~~~v~nV~v~n~~~~ 236 (349)
T 1hg8_A 202 SNMYCSGGHG-LSIGSVGGK-SDNVVDGVQFLSSQVV 236 (349)
T ss_dssp EEEEEESSCC-EEEEEESSS-SCCEEEEEEEEEEEEE
T ss_pred EeEEEeCCcc-eEEcccccc-ccCCEEEEEEEEEEEE
Confidence 9999997554 556764222 1122 69999999994
No 25
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=97.91 E-value=0.00022 Score=76.55 Aligned_cols=123 Identities=16% Similarity=0.219 Sum_probs=76.3
Q ss_pred chhHHHHHhcCCC-eEEEEccCeeEEecceEEe------cCCceEEeec-ceEEEecceEEEEeeeccEEEEeeEEEeec
Q 011204 122 PGTLRHAVIQTEP-IWITFASNMLIKLKHELII------NSYKTIDGRG-ANVEITGNGCLTLQYVSHVIIHNVHIHHCK 193 (491)
Q Consensus 122 pGsLR~Av~~~~P-r~IvF~~sg~I~L~~~L~V------~SnkTI~G~G-a~v~I~Ggg~i~i~~a~NVIIrnL~Ir~~~ 193 (491)
+.+|.+|+.+-.| -+|++. .|+-+ ...|.+ ...+||.|.+ ..+.|.|...|++ .+++|.|++|+|++..
T Consensus 31 ~~~Lq~Ai~~A~pGDtI~L~-~GtY~-~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i-~g~~v~i~GL~i~~~~ 107 (506)
T 1dbg_A 31 NETLYQVVKEVKPGGLVQIA-DGTYK-DVQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVEL-RGEHLILEGIWFKDGN 107 (506)
T ss_dssp HHHHHHHHHHCCTTCEEEEC-SEEEE-TCEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEE-CSSSEEEESCEEEEEC
T ss_pred HHHHHHHHHhCCCCCEEEEC-CCEEe-cceEEEecCCcCCCCEEEECCCCCccEEeCCceEEE-EcCCEEEECeEEECCC
Confidence 4579999976554 344443 45543 125666 5678999974 3477887666888 5799999999999853
Q ss_pred cCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCe-eEee-------eCCceEEEEcceecc
Q 011204 194 PSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGL-IDAI-------MGSTGITISNNYFSH 259 (491)
Q Consensus 194 ~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGl-iDv~-------~gS~~ITISnn~f~~ 259 (491)
. .. ..++ ..+..++.+. ++++-|.+|.|..+.++. +.+. ..+.+.+|.+|+|..
T Consensus 108 ~---~~-------~~~~-~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 108 R---AI-------QAWK-SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp C---CT-------TTCC-TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEEC
T ss_pred c---ce-------eeee-cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEEC
Confidence 1 00 0011 0123456665 477778888888776651 1122 234556788888775
No 26
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.89 E-value=0.00028 Score=73.92 Aligned_cols=126 Identities=14% Similarity=0.050 Sum_probs=88.7
Q ss_pred cCCceEEeecceEE---EecceEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEe
Q 011204 154 NSYKTIDGRGANVE---ITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDH 230 (491)
Q Consensus 154 ~SnkTI~G~Ga~v~---I~Ggg~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDH 230 (491)
...-||+|+|..-. -.....|.+..++||.|++|+|++. ...+|.+.+++||.|++
T Consensus 107 ~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~ns---------------------p~~~i~i~~~~nv~I~n 165 (422)
T 1rmg_A 107 TSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDA---------------------PAFHFTMDTCSDGEVYN 165 (422)
T ss_dssp SSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECC---------------------SSCSEEEEEEEEEEEEE
T ss_pred ccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECC---------------------CceEEEEeCcCCEEEEe
Confidence 34468888875310 0011247788999999999999973 12479999999999999
Q ss_pred eEeec----CCCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc----cCC-
Q 011204 231 CSLSY----CTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC----RRG- 301 (491)
Q Consensus 231 cS~S~----~~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~----R~G- 301 (491)
|.+.. ..||. |+.. ++|+|++|.|...+...-+++. ..+|++.+|++... +.=++ +.+
T Consensus 166 ~~I~~~d~~ntDGi-di~~--~nV~I~n~~i~~gDD~Iai~s~-------~~nI~I~n~~~~~~---~GisIGS~g~~~~ 232 (422)
T 1rmg_A 166 MAIRGGNEGGLDGI-DVWG--SNIWVHDVEVTNKDECVTVKSP-------ANNILVESIYCNWS---GGCAMGSLGADTD 232 (422)
T ss_dssp EEEECCSSTTCCSE-EEEE--EEEEEEEEEEESSSEEEEEEEE-------EEEEEEEEEEEESS---SEEEEEEECTTEE
T ss_pred EEEECCCCCCCccE-eecC--CeEEEEeeEEeCCCCeEEeCCC-------CcCEEEEeEEEcCC---cceeecccCCCCc
Confidence 99997 46774 7654 9999999999988877777651 15899999998532 11111 111
Q ss_pred --eEEEEcceEeCC
Q 011204 302 --YIHVVNNDFTSW 313 (491)
Q Consensus 302 --~vHvvNN~y~nw 313 (491)
.++|-|+.+.+-
T Consensus 233 v~nV~v~n~~~~~~ 246 (422)
T 1rmg_A 233 VTDIVYRNVYTWSS 246 (422)
T ss_dssp EEEEEEEEEEEESS
T ss_pred EEEEEEEeEEEecc
Confidence 467888887764
No 27
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.87 E-value=7.5e-05 Score=75.96 Aligned_cols=107 Identities=13% Similarity=0.140 Sum_probs=80.7
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecC---------CCCeeEe
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC---------TDGLIDA 243 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~---------~DGliDv 243 (491)
.|.+.+++||.|++|+|++. ...+|.+..++||.|++|++... .|| ||+
T Consensus 106 ~i~~~~~~nv~i~~i~i~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 163 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNS---------------------PVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA-FDI 163 (339)
T ss_dssp CEEEEEEEEEEEESCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCS-EEE
T ss_pred EEEEeecCcEEEEEEEEEcC---------------------CcceEEEecccCeEEeeEEEECCccccccCCCCCc-EEe
Confidence 37888999999999999974 23579999999999999999863 577 575
Q ss_pred eeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc------cCC---eEEEEcceEeCC
Q 011204 244 IMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------RRG---YIHVVNNDFTSW 313 (491)
Q Consensus 244 ~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~------R~G---~vHvvNN~y~nw 313 (491)
..+++|+|++|.|...+...-++++ .+|++.+|.+.... . =.+ ..+ .++|-|+.+.+-
T Consensus 164 -~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~gh-G--isiGS~g~~~~~~v~nV~v~n~~~~~t 230 (339)
T 1ia5_A 164 -GTSTYVTISGATVYNQDDCVAVNSG--------ENIYFSGGYCSGGH-G--LSIGSVGGRSDNTVKNVTFVDSTIINS 230 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEESSS-C--EEEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred -cCCceEEEEeeEEEcCCCeEEEeCC--------eEEEEEeEEEECCc-e--EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 6899999999999987776666542 58999999985432 1 111 011 467888887763
No 28
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.87 E-value=7.7e-05 Score=75.84 Aligned_cols=107 Identities=13% Similarity=0.151 Sum_probs=80.8
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecC---------CCCeeEe
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC---------TDGLIDA 243 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~---------~DGliDv 243 (491)
.|.+.+++||.|++|+|++. ...+|.+..++||.|+++++... .|| +|+
T Consensus 102 ~i~~~~~~nv~i~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 159 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNT---------------------PVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDA-FDV 159 (339)
T ss_dssp CEEEEEEEEEEEECCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCS-EEE
T ss_pred EEEEeeeCcEEEEEEEEEeC---------------------CcceEEEeccCCEEEEEEEEECCccccccCCCCCc-EEE
Confidence 37888999999999999974 23579999999999999999863 577 474
Q ss_pred eeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc------cCC---eEEEEcceEeCC
Q 011204 244 IMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------RRG---YIHVVNNDFTSW 313 (491)
Q Consensus 244 ~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~------R~G---~vHvvNN~y~nw 313 (491)
..+++|+|++|.|...+...-++++ .+|+|.+|.+.... . =.+ ..+ .++|.|+.+.+-
T Consensus 160 -~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~~gh-G--isiGSlg~~~~~~v~nV~v~n~~~~~~ 226 (339)
T 2iq7_A 160 -GSSTGVYISGANVKNQDDCLAINSG--------TNITFTGGTCSGGH-G--LSIGSVGGRSDNTVKTVTISNSKIVNS 226 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEESSC-C--EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred -cCcceEEEEecEEecCCCEEEEcCC--------ccEEEEeEEEECCc-e--EEECcCCcccCCCEEEEEEEeeEEECC
Confidence 6799999999999887766555542 58999999996432 1 111 011 477888888764
No 29
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.81 E-value=0.00026 Score=72.72 Aligned_cols=136 Identities=13% Similarity=0.135 Sum_probs=93.6
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeec-----CCCCeeEeeeCC
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY-----CTDGLIDAIMGS 247 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~-----~~DGliDv~~gS 247 (491)
.|.+.+++||.|++|+|++.. .-.+.+.++++|.|+++++.. -.||. |+ ..|
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp---------------------~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGi-d~-~~s 209 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSP---------------------NFHVVFSDGDGFTAWKTTIKTPSTARNTDGI-DP-MSS 209 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCS---------------------SCSEEEESCEEEEEEEEEEECCTTCSSCCSE-EE-ESC
T ss_pred EEEEEcceEEEEEeEEEECCC---------------------cEEEEEeCCCcEEEEeEEEECCCCCCCCceE-ee-cCC
Confidence 378889999999999999841 125888899999999999987 36775 74 689
Q ss_pred ceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccCC-------eEEEEcceEeCCcceEee-
Q 011204 248 TGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRG-------YIHVVNNDFTSWEMYAIG- 319 (491)
Q Consensus 248 ~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~G-------~vHvvNN~y~nw~~yaig- 319 (491)
++|+|++|.|...+...-+.+... .....+|++.+|+|..++ . +..| .++|.||.+.+-. +++.
T Consensus 210 ~nV~I~n~~i~~gDDcIaiks~~~--~~~s~nI~I~n~~~~~gh-G----isiGSe~~~v~nV~v~n~~~~~t~-~GirI 281 (376)
T 1bhe_A 210 KNITIAYSNIATGDDNVAIKAYKG--RAETRNISILHNDFGTGH-G----MSIGSETMGVYNVTVDDLKMNGTT-NGLRI 281 (376)
T ss_dssp EEEEEESCEEECSSCSEEEEECTT--SCCEEEEEEEEEEECSSS-C----EEEEEEESSEEEEEEEEEEEESCS-EEEEE
T ss_pred ceEEEEeCEEecCCCeEEEcccCC--CCCceEEEEEeeEEEccc-c----EEeccCCccEeeEEEEeeEEeCCC-cEEEE
Confidence 999999999998877655543110 011268999999996432 1 1111 5788899887642 2221
Q ss_pred ------cCCCceEEEeCcEEeCCCCC
Q 011204 320 ------GSANPTINSQGNRYTAPPDD 339 (491)
Q Consensus 320 ------gs~~~~I~segNyF~~~~~~ 339 (491)
++.-..|.+++..++....|
T Consensus 282 Kt~~g~~G~v~ni~f~ni~~~~v~~~ 307 (376)
T 1bhe_A 282 KSDKSAAGVVNGVRYSNVVMKNVAKP 307 (376)
T ss_dssp ECCTTTCCEEEEEEEEEEEEESCSEE
T ss_pred EEecCCCceEeeEEEEeEEEeCCCce
Confidence 11123466777777765544
No 30
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.79 E-value=0.00012 Score=74.40 Aligned_cols=105 Identities=12% Similarity=0.232 Sum_probs=79.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecC---------CCCeeEee
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC---------TDGLIDAI 244 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~---------~DGliDv~ 244 (491)
|.+.+++||.|++|+|++.. .-+|.+. ++||.|+++++... .|| ||+
T Consensus 103 i~~~~~~nv~i~~i~i~nsp---------------------~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDG-idi- 158 (336)
T 1nhc_A 103 MYIHDVEDSTFKGINIKNTP---------------------VQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDG-FDI- 158 (336)
T ss_dssp EEEEEEEEEEEESCEEECCS---------------------SCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCS-EEE-
T ss_pred EEEeeeCcEEEEEEEEEeCC---------------------ccEEEEE-eCCEEEEEEEEECCCcccccCCCCCc-EEe-
Confidence 78889999999999999741 1259999 99999999999874 677 575
Q ss_pred eCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc------cCC---eEEEEcceEeCC
Q 011204 245 MGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------RRG---YIHVVNNDFTSW 313 (491)
Q Consensus 245 ~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~------R~G---~vHvvNN~y~nw 313 (491)
..+++|+|++|.|...+...-++++ .+|++.+|++.... . =.+ ..+ .++|-|+.+.+-
T Consensus 159 ~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~~gh-G--isiGS~g~~~~~~v~nV~v~n~~~~~t 225 (336)
T 1nhc_A 159 SESTGVYISGATVKNQDDCIAINSG--------ESISFTGGTCSGGH-G--LSIGSVGGRDDNTVKNVTISDSTVSNS 225 (336)
T ss_dssp CSCEEEEEESCEEESSSEEEEESSE--------EEEEEESCEEESSS-E--EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred cCCCeEEEEeCEEEcCCCEEEEeCC--------eEEEEEeEEEECCc-C--ceEccCccccCCCEEEEEEEeeEEECC
Confidence 6799999999999988777666553 58999999985432 1 011 111 477888887763
No 31
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.76 E-value=8.9e-05 Score=76.21 Aligned_cols=116 Identities=12% Similarity=0.102 Sum_probs=74.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCcc-----------cc-CcCCCCCceeeeCCceEEEEeeEeecCCCCee
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHV-----------GY-RGKSDGDGISIFGSQKIWVDHCSLSYCTDGLI 241 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~-----------g~-r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGli 241 (491)
|.+.+++||.|++|++++. |.|...+. +. ++ +. ......|||.+..++||+|.+|.+....|. |
T Consensus 129 i~~~~~~nv~i~~iti~ns-p~~~i~i~-~~-nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDc-I 204 (362)
T 1czf_A 129 FYAHGLDSSSITGLNIKNT-PLMAFSVQ-AN-DITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDC-L 204 (362)
T ss_dssp EEEEEEETEEEESCEEECC-SSCCEEEE-CS-SEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCS-E
T ss_pred EEEeecccEEEEEEEEecC-CccEEEEe-eC-CEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCE-E
Confidence 5666777777777777764 22222111 10 00 00 002468999999999999999999987665 4
Q ss_pred EeeeCCceEEEEcceeccCCceeeeccCCcccCCCC-eEEEEEeeEecCCCcccCccc
Q 011204 242 DAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRC 298 (491)
Q Consensus 242 Dv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g-~~VTihhN~F~~n~~qR~Pr~ 298 (491)
.++. .++|+|+||.+..... +.+|+...+. ..+ .+|++.++.|. + .++.-|+
T Consensus 205 aiks-g~nI~i~n~~~~~ghG-isiGS~G~~~-~~~v~nV~v~n~~~~-~-t~~GirI 257 (362)
T 1czf_A 205 AVNS-GENIWFTGGTCIGGHG-LSIGSVGDRS-NNVVKNVTIEHSTVS-N-SENAVRI 257 (362)
T ss_dssp EESS-EEEEEEESCEEESSCC-EEEEEECSSS-CCEEEEEEEEEEEEE-E-EEEEEEE
T ss_pred EEeC-CeEEEEEEEEEeCCce-eEEeeccccC-CCCEEEEEEEeeEEE-C-CceEEEE
Confidence 5544 5999999999998654 6777632221 122 68999999994 4 3444444
No 32
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.69 E-value=0.00022 Score=73.27 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=52.2
Q ss_pred CceeeeCCceEEEEeeEeecC---------CCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeE
Q 011204 216 DGISIFGSQKIWVDHCSLSYC---------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNH 286 (491)
Q Consensus 216 DaIsI~gs~nVWIDHcS~S~~---------~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~ 286 (491)
-+|.+. ++||.|++|.+... .|| +|+ ..+++|+|++|.|...+...-++++ .+|+|.+|.
T Consensus 150 ~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDG-idi-~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~ 218 (362)
T 1czf_A 150 MAFSVQ-ANDITFTDVTINNADGDTQGGHNTDA-FDV-GNSVGVNIIKPWVHNQDDCLAVNSG--------ENIWFTGGT 218 (362)
T ss_dssp CCEEEE-CSSEEEESCEEECGGGGTTTCCSCCS-EEE-CSCEEEEEESCEEECSSCSEEESSE--------EEEEEESCE
T ss_pred cEEEEe-eCCEEEEEEEEECCccccccCCCCCc-eee-cCcceEEEEeeEEecCCCEEEEeCC--------eEEEEEEEE
Confidence 469999 99999999999862 577 575 5799999999999988777667653 589999999
Q ss_pred ecCC
Q 011204 287 FGVA 290 (491)
Q Consensus 287 F~~n 290 (491)
+...
T Consensus 219 ~~~g 222 (362)
T 1czf_A 219 CIGG 222 (362)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8653
No 33
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=97.64 E-value=0.00024 Score=77.34 Aligned_cols=100 Identities=17% Similarity=0.101 Sum_probs=68.2
Q ss_pred eeccEEEEeeEEEeeccCCCccccCCCCcc-----cc---C-cCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCc
Q 011204 178 YVSHVIIHNVHIHHCKPSGNTMIASSPTHV-----GY---R-GKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGST 248 (491)
Q Consensus 178 ~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~-----g~---r-~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~ 248 (491)
+++||.|++|+|++. |.|...+..+. ++ +. . .....|||.++ +||.|.+|.+....| +|.++ ++
T Consensus 331 ~c~NV~I~Giti~NS-p~w~i~~~~c~-nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gDD-cIaIk--s~ 403 (574)
T 1ogo_X 331 GGQTWYCVGPTINAP-PFNTMDFNGNS-GISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVNDD-AIKIY--YS 403 (574)
T ss_dssp SSEEEEEESCEEECC-SSCSEEECSSS-CEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESSC-SEECC--ST
T ss_pred CceeEEEECeEEECC-CCcEEeecCCC-ChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCCC-EEEEC--Cc
Confidence 789999999999885 33433221111 11 00 0 01238999998 999999999999988 55553 49
Q ss_pred eEEEEcceecc-CCce-eeeccCCcccCCCCeEEEEEeeEec
Q 011204 249 GITISNNYFSH-HNEV-MLLGHNDKYALDMGMQVTIAFNHFG 288 (491)
Q Consensus 249 ~ITISnn~f~~-h~k~-mL~G~sds~~~D~g~~VTihhN~F~ 288 (491)
+|+|+||.+.. |... .-+|++.. .-.+|+|.++.+.
T Consensus 404 NI~I~nc~i~~g~g~g~IsIGS~~g----~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 404 GASVSRATIWKCHNDPIIQMGWTSR----DISGVTIDTLNVI 441 (574)
T ss_dssp TCEEEEEEEEECSSSCSEECCSSCC----CEEEEEEEEEEEE
T ss_pred cEEEEeEEEECCCCCceEEEcCCCC----cEEEEEEEeEEEE
Confidence 99999999874 4444 67787321 1168999998884
No 34
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.63 E-value=0.00076 Score=68.85 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=77.5
Q ss_pred EEEE-e-eeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecC--------------
Q 011204 173 CLTL-Q-YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC-------------- 236 (491)
Q Consensus 173 ~i~i-~-~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~-------------- 236 (491)
.|++ . .++||.|++|+|++. ...+|.+.+++||.|+++++...
T Consensus 104 ~i~~~~~~~~nv~I~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~ 162 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNW---------------------PVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPA 162 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECC---------------------SSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCS
T ss_pred EEEEeecCcCcEEEEEEEEEcC---------------------CCceEEEeccCCEEEEEEEEECCCCcccccccccccc
Confidence 4777 6 677999999999974 12469999999999999999863
Q ss_pred ---CCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccc------cCC---eEE
Q 011204 237 ---TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------RRG---YIH 304 (491)
Q Consensus 237 ---~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~------R~G---~vH 304 (491)
.||. |+ ..+++|+|++|.+...+...-+.++ .+|+|.+|++.... . =.+ ..+ .++
T Consensus 163 ~~NtDGi-d~-~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~gh-G--isiGS~G~~~~~~v~nV~ 229 (349)
T 1hg8_A 163 AHNTDGF-DI-SSSDHVTLDNNHVYNQDDCVAVTSG--------TNIVVSNMYCSGGH-G--LSIGSVGGKSDNVVDGVQ 229 (349)
T ss_dssp CCSCCSE-EE-ESCEEEEEEEEEEECSSCSEEESSE--------EEEEEEEEEEESSC-C--EEEEEESSSSCCEEEEEE
T ss_pred CCCCCeE-EE-ccccEEEEEeeEEecCCCeEEeeCC--------eEEEEEeEEEeCCc-c--eEEccccccccCCEEEEE
Confidence 4664 64 6899999999999987766555542 58999999985432 1 011 112 467
Q ss_pred EEcceEeC
Q 011204 305 VVNNDFTS 312 (491)
Q Consensus 305 vvNN~y~n 312 (491)
|.|+.+.+
T Consensus 230 v~n~~~~~ 237 (349)
T 1hg8_A 230 FLSSQVVN 237 (349)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEC
Confidence 77877765
No 35
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.62 E-value=0.00025 Score=72.14 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=79.2
Q ss_pred EEEeeecc-EEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEE
Q 011204 174 LTLQYVSH-VIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITI 252 (491)
Q Consensus 174 i~i~~a~N-VIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITI 252 (491)
+.+..++| |.|+|++|+... ++. . . .....|||.+ .++||+|.+|.++...| .+.++.+ .+|+|
T Consensus 122 i~i~~~~n~v~i~~v~I~~~~--~d~-------~-~--~~~NtDGidi-~s~nV~I~n~~i~~gDD-cIaiksg-~nI~i 186 (335)
T 1k5c_A 122 ISVGPTDAHLTLDGITVDDFA--GDT-------K-N--LGHNTDGFDV-SANNVTIQNCIVKNQDD-CIAINDG-NNIRF 186 (335)
T ss_dssp EEEEEEEEEEEEESCEEECGG--GGG-------G-G--CCCSCCSEEE-ECSSEEEESCEEESSSC-SEEEEEE-EEEEE
T ss_pred EEEEccCCeEEEEEEEEECCC--Ccc-------c-c--cCCCCCeEcc-cCCeEEEEeeEEEcCCC-EEEeeCC-eeEEE
Confidence 44556677 777777776421 000 0 0 0236799999 99999999999996655 5666655 99999
Q ss_pred EcceeccCCceeeeccCCcccCCCC-eEEEEEeeEecCCCcccCcccc---CCe-EEEEcceEeCCcceEe
Q 011204 253 SNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCR---RGY-IHVVNNDFTSWEMYAI 318 (491)
Q Consensus 253 Snn~f~~h~k~mL~G~sds~~~D~g-~~VTihhN~F~~n~~qR~Pr~R---~G~-vHvvNN~y~nw~~yai 318 (491)
+||.+..... +-+|+... ..+ .+|++.++.| .+ .++.-|++ .+. -.+-|=.|+|..+..+
T Consensus 187 ~n~~~~~ghG-isIGS~g~---~~~v~nV~v~n~~~-~~-t~~girIKt~~g~~~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 187 ENNQCSGGHG-ISIGSIAT---GKHVSNVVIKGNTV-TR-SMYGVRIKAQRTATSASVSGVTYDANTISGI 251 (335)
T ss_dssp ESCEEESSCC-EEEEEECT---TCEEEEEEEESCEE-EE-EEEEEEEEEETTCCSCEEEEEEEESCEEEEE
T ss_pred EEEEEECCcc-CeEeeccC---CCCEEEEEEEeeEE-EC-CCceEEEEEeCCCCcceEeeeEEEEEEEEcc
Confidence 9999998654 66776532 112 6899999999 44 34444443 112 3344444666655443
No 36
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.60 E-value=0.00098 Score=70.87 Aligned_cols=122 Identities=14% Similarity=0.103 Sum_probs=78.2
Q ss_pred CCceEEeecceEEEecce-------EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEE
Q 011204 155 SYKTIDGRGANVEITGNG-------CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIW 227 (491)
Q Consensus 155 SnkTI~G~Ga~v~I~Ggg-------~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVW 227 (491)
.|++|.|.|....|.|.| .|.+.+++||.|++|+|++. |. +.. ...++ ..+.|||.+ .++||+
T Consensus 109 ~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~---w~--ih~-s~~V~---i~NtDGi~i-~s~nV~ 178 (464)
T 1h80_A 109 RNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDN---KT--IFA-SILVD---VTERNGRLH-WSRNGI 178 (464)
T ss_dssp EEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECC---SC--BSC-SEEEC---EEEETTEEE-EEEEEE
T ss_pred cceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEecc---ce--Eee-ceeee---eecCCCcee-eccCEE
Confidence 466777766444454432 36778999999999999873 21 110 01111 124688887 899999
Q ss_pred EEeeEeecCCCCe--eEeeeCCceEEEEcceeccCCceeeeccCCc-c-cCCCC--eEEEEEeeEec
Q 011204 228 VDHCSLSYCTDGL--IDAIMGSTGITISNNYFSHHNEVMLLGHNDK-Y-ALDMG--MQVTIAFNHFG 288 (491)
Q Consensus 228 IDHcS~S~~~DGl--iDv~~gS~~ITISnn~f~~h~k~mL~G~sds-~-~~D~g--~~VTihhN~F~ 288 (491)
|.+|.+....|+. .+ ...+.+|+|++|+|.. ....-+-+.+. . ....+ .+|+|.++.|.
T Consensus 179 I~n~~I~~gddgiGs~~-~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~ 243 (464)
T 1h80_A 179 IERIKQNNALFGYGLIQ-TYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCS 243 (464)
T ss_dssp EEEEEEESCCTTCEEEE-ESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEE
T ss_pred EeceEEecCCCeEEecc-cCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEE
Confidence 9999999987654 33 5678999999999987 22222222110 0 01112 68999999993
No 37
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.45 E-value=0.023 Score=57.61 Aligned_cols=132 Identities=12% Similarity=0.175 Sum_probs=87.8
Q ss_pred hHHHHHhc----CCCeEEEEccCeeEEecceEEec---CCceEEeecce-EEEecce------------EEEEeeeccEE
Q 011204 124 TLRHAVIQ----TEPIWITFASNMLIKLKHELIIN---SYKTIDGRGAN-VEITGNG------------CLTLQYVSHVI 183 (491)
Q Consensus 124 sLR~Av~~----~~Pr~IvF~~sg~I~L~~~L~V~---SnkTI~G~Ga~-v~I~Ggg------------~i~i~~a~NVI 183 (491)
|+.+||.+ +..+++|+=..|+- ++.|.|+ +|+||.|.+.. ..|.+.. .+++ .+++++
T Consensus 21 TIq~AI~aap~~~~~~~~I~I~~G~Y--~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 97 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRIKAGVY--RENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAA-VGAGFL 97 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEE--ECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEE-CSTTCE
T ss_pred CHHHHHHhccccCCceEEEEEcCCeE--eeeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEE-ECCCEE
Confidence 78888854 22344555456653 4678884 68999999853 5565432 4677 689999
Q ss_pred EEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEEcceeccCCce
Q 011204 184 IHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEV 263 (491)
Q Consensus 184 IrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~h~k~ 263 (491)
++||+|++... + .....-||.+ .++++.+.+|.|....|.+.+ +. ....+.+|++...-.
T Consensus 98 ~~nlt~~Nt~g--~-------------~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~--~~-~r~~~~~c~I~G~vD- 157 (319)
T 1gq8_A 98 ARDITFQNTAG--A-------------AKHQAVALRV-GSDLSAFYRCDILAYQDSLYV--HS-NRQFFINCFIAGTVD- 157 (319)
T ss_dssp EEEEEEEECCC--G-------------GGCCCCSEEE-CCTTEEEEEEEEECSTTCEEE--CS-SEEEEESCEEEESSS-
T ss_pred EEEeEeEccCC--C-------------cCCceEEEEe-cCCcEEEEEeEECccceeeee--cC-ccEEEEecEEEeeee-
Confidence 99999998521 0 0123346666 578999999999999999875 22 345888999874322
Q ss_pred eeeccCCcccCCCCeEEEEEeeEe
Q 011204 264 MLLGHNDKYALDMGMQVTIAFNHF 287 (491)
Q Consensus 264 mL~G~sds~~~D~g~~VTihhN~F 287 (491)
.++|.. .+-|.+|.+
T Consensus 158 FIfG~~---------~a~f~~c~i 172 (319)
T 1gq8_A 158 FIFGNA---------AVVLQDCDI 172 (319)
T ss_dssp CEEESC---------EEEEESCEE
T ss_pred EEecCC---------cEEEEeeEE
Confidence 244432 455666666
No 38
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.37 E-value=0.017 Score=58.46 Aligned_cols=115 Identities=17% Similarity=0.285 Sum_probs=79.6
Q ss_pred hHHHHHhc----CCCeEEEEccCeeEEecceEEec---CCceEEeecce-EEEecc------------eEEEEeeeccEE
Q 011204 124 TLRHAVIQ----TEPIWITFASNMLIKLKHELIIN---SYKTIDGRGAN-VEITGN------------GCLTLQYVSHVI 183 (491)
Q Consensus 124 sLR~Av~~----~~Pr~IvF~~sg~I~L~~~L~V~---SnkTI~G~Ga~-v~I~Gg------------g~i~i~~a~NVI 183 (491)
|+.+||.+ +..+++|+=..|+- ++.|.|+ +|+||.|.+.. ..|.+. ..+++ .+++++
T Consensus 17 TIq~AI~aap~~~~~~~~I~I~~G~Y--~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 93 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYVKRGTY--KENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQGFI 93 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEE--ECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CSTTCE
T ss_pred cHHHHHhhcccCCCceEEEEEcCCEE--eeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECCCEE
Confidence 68888854 22344555456653 4778884 68999999853 556543 24677 789999
Q ss_pred EEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEEcceeccC
Q 011204 184 IHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHH 260 (491)
Q Consensus 184 IrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~h 260 (491)
++||+|++... + .....-||.+ .++++.+.+|.|....|.+.+ +. ..-.+.+|++..+
T Consensus 94 ~~~lt~~Nt~g--~-------------~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~--~~-~r~~~~~c~I~G~ 151 (317)
T 1xg2_A 94 LQDICIQNTAG--P-------------AKDQAVALRV-GADMSVINRCRIDAYQDTLYA--HS-QRQFYRDSYVTGT 151 (317)
T ss_dssp EESCEEEECCC--G-------------GGCCCCSEEE-CCTTEEEESCEEECSTTCEEE--CS-SEEEEESCEEEES
T ss_pred EEEeEEecccC--C-------------ccCceEEEEE-eCCcEEEEEeEeCccccceee--cC-ccEEEEeeEEEec
Confidence 99999998521 0 0123346666 578999999999999999875 22 3347888888744
No 39
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.35 E-value=0.0082 Score=65.58 Aligned_cols=140 Identities=14% Similarity=0.094 Sum_probs=88.8
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeec----CCCCeeEeeeCCce
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY----CTDGLIDAIMGSTG 249 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~----~~DGliDv~~gS~~ 249 (491)
|.+.+++||.|++|+|++.. .-+|.+.+++||.|+++.+.. -.||. |+ ..+++
T Consensus 334 i~~~~~~nv~I~giti~ns~---------------------~~~i~~~~~~nv~i~~v~i~~~~~~NtDGi-di-~~s~n 390 (608)
T 2uvf_A 334 MTLRGVENVYLAGFTVRNPA---------------------FHGIMNLENHNVVANGLIHQTYDANNGDGI-EF-GNSQN 390 (608)
T ss_dssp EEEESEEEEEEESCEEECCS---------------------SCSEEEESCEEEEEESCEEECTTCTTCCSE-EE-ESCEE
T ss_pred EEEEeeeeEEEeCcEEecCC---------------------CCEEEEecCCCEEEeeEEEcCCCCCCCCeE-Ee-cCCce
Confidence 56677888899998888741 125788899999999998864 36775 75 68999
Q ss_pred EEEEcceeccCCceeeeccC-CcccCCCC--eEEEEEeeEecCCCccc-C-ccccCC--eEEEEcceEeCCc-ceEee--
Q 011204 250 ITISNNYFSHHNEVMLLGHN-DKYALDMG--MQVTIAFNHFGVALVQR-M-PRCRRG--YIHVVNNDFTSWE-MYAIG-- 319 (491)
Q Consensus 250 ITISnn~f~~h~k~mL~G~s-ds~~~D~g--~~VTihhN~F~~n~~qR-~-Pr~R~G--~vHvvNN~y~nw~-~yaig-- 319 (491)
|+|++|.|...+...-+.+. +.+..+.. .+|+|.+|++..+..-- + -....+ .++|.||.+.+-. ...|.
T Consensus 391 V~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~ 470 (608)
T 2uvf_A 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKST 470 (608)
T ss_dssp EEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEE
T ss_pred EEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeee
Confidence 99999999988776555322 22222211 68999999995432100 0 001111 4889999988742 12221
Q ss_pred -cC--CCceEEEeCcEEeCC
Q 011204 320 -GS--ANPTINSQGNRYTAP 336 (491)
Q Consensus 320 -gs--~~~~I~segNyF~~~ 336 (491)
++ .-..|.++++.++..
T Consensus 471 ~g~gG~v~nI~~~ni~m~~v 490 (608)
T 2uvf_A 471 STIGGGARNVTFRNNAMRDL 490 (608)
T ss_dssp TTTCCEEEEEEEEEEEEEEE
T ss_pred cCCCceEECcEEEeeEEEcc
Confidence 11 123566677766665
No 40
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=97.28 E-value=0.0018 Score=70.16 Aligned_cols=102 Identities=9% Similarity=0.030 Sum_probs=67.7
Q ss_pred eeeccEEEEeeEEEeeccCCCccccCCC-Cc--c-----c-cC-cCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeC
Q 011204 177 QYVSHVIIHNVHIHHCKPSGNTMIASSP-TH--V-----G-YR-GKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMG 246 (491)
Q Consensus 177 ~~a~NVIIrnL~Ir~~~~~g~~~v~~s~-~~--~-----g-~r-~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~g 246 (491)
.+++||.|++|++++. |.|...+.... .+ + . .. .....|||.+. +||.|.+|.|....| +|.++
T Consensus 290 ~~c~nV~I~Giti~Ns-p~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~gDD-cIaIk-- 363 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAP-PFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTDDD-GLKMY-- 363 (549)
T ss_dssp SSCEEEEEESCEEECC-SSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEESSC-CEECC--
T ss_pred CCceEEEEECcEEECC-CceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCCCC-EEEEC--
Confidence 6788999999999885 22322211111 01 0 0 00 01247999998 999999999999888 55554
Q ss_pred CceEEEEcceecc-CCce-eeeccCCcccCCCCeEEEEEeeEec
Q 011204 247 STGITISNNYFSH-HNEV-MLLGHNDKYALDMGMQVTIAFNHFG 288 (491)
Q Consensus 247 S~~ITISnn~f~~-h~k~-mL~G~sds~~~D~g~~VTihhN~F~ 288 (491)
+++|+|+||.+.. |... .-+|++. +.-.+|+|.++.+.
T Consensus 364 s~NI~I~n~~~~~~~g~~~IsiGs~~----~~V~NV~v~n~~i~ 403 (549)
T 1x0c_A 364 YSNVTARNIVMWKESVAPVVEFGWTP----RNTENVLFDNVDVI 403 (549)
T ss_dssp SSSEEEEEEEEEECSSSCSEECCBSC----CCEEEEEEEEEEEE
T ss_pred CCCEEEEeeEEEcCCCCceEEECCCC----CcEEEEEEEeeEEE
Confidence 4999999999974 4444 6678742 11268999999884
No 41
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.20 E-value=0.013 Score=59.99 Aligned_cols=132 Identities=20% Similarity=0.190 Sum_probs=82.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCce-ee-eCCceEEEEeeEeecCCCCeeEeee------
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGI-SI-FGSQKIWVDHCSLSYCTDGLIDAIM------ 245 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaI-sI-~gs~nVWIDHcS~S~~~DGliDv~~------ 245 (491)
|.+.+++||+|.|..|.++ .|++ .+ .++++|-|-+|.|+....+++--..
T Consensus 153 I~i~~s~nVwIDHcs~s~~----------------------~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d 210 (346)
T 1pxz_A 153 ITMRNVTNAWIDHNSLSDC----------------------SDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDD 210 (346)
T ss_dssp EEEESCEEEEEESCEEECC----------------------SSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGG
T ss_pred EEEecCceEEEEeeEEecC----------------------CCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccC
Confidence 8888899999999999864 2554 56 5899999999999976555442111
Q ss_pred CCceEEEEcceeccCCce-e-eeccCCcccCCCCeEEEEEeeEecCCCcccCcccc-CCeEEEEcceEeCCcc-------
Q 011204 246 GSTGITISNNYFSHHNEV-M-LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEM------- 315 (491)
Q Consensus 246 gS~~ITISnn~f~~h~k~-m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R-~G~vHvvNN~y~nw~~------- 315 (491)
....||+.+|+|.++... | .+. ..++.+.+|+|. +...+.=-.+ ...+-+.||||..-..
T Consensus 211 ~~~~vT~~~N~f~~~~~~R~Pr~r---------~g~~hv~NN~~~-~~~~~~i~~~~~~~i~~egN~F~~~~~~~~k~v~ 280 (346)
T 1pxz_A 211 KSMKVTVAFNQFGPNAGQRMPRAR---------YGLVHVANNNYD-PWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVT 280 (346)
T ss_dssp GGCEEEEESCEECSSEEECTTEEE---------SSEEEEESCEEC-CCSSCSEEEESCCEEEEESCEEECCSCGGGCBSE
T ss_pred CceEEEEEeeEEeCCccccCccEe---------cceEEEEeeEEE-cccceEEeccCCceEEEECCEEECCCCCcccccE
Confidence 123899999999433221 1 111 136889999994 4232221112 2468899999987421
Q ss_pred eEeecC-----CCceEEEeCcEEeCCC
Q 011204 316 YAIGGS-----ANPTINSQGNRYTAPP 337 (491)
Q Consensus 316 yaiggs-----~~~~I~segNyF~~~~ 337 (491)
+-+... .+-...++++.|.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~g~~~~nG~ 307 (346)
T 1pxz_A 281 KRIGCESPSACANWVWRSTRDAFINGA 307 (346)
T ss_dssp EECSCSCHHHHTTSCEEEESCEEETTC
T ss_pred EEeccCCccccccccEecCCCeEEece
Confidence 111111 1224667888888765
No 42
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.17 E-value=0.011 Score=60.78 Aligned_cols=67 Identities=16% Similarity=0.312 Sum_probs=47.5
Q ss_pred CCceeee-CCceEEEEeeEeecC-------CCCeeEeeeCCceEEEEcceeccCCceee-eccCCcccCCCCeEEEEEee
Q 011204 215 GDGISIF-GSQKIWVDHCSLSYC-------TDGLIDAIMGSTGITISNNYFSHHNEVML-LGHNDKYALDMGMQVTIAFN 285 (491)
Q Consensus 215 gDaIsI~-gs~nVWIDHcS~S~~-------~DGliDv~~gS~~ITISnn~f~~h~k~mL-~G~sds~~~D~g~~VTihhN 285 (491)
+.+|.|. +++||+|.|..|..+ .|++ . ..++++|-|-+|.|+.....++ .+.. .-..|||.+|
T Consensus 123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI-~-i~~s~nvwIDHcs~s~~~d~~~~~~~~------~s~~vTISnn 194 (359)
T 1qcx_A 123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAI-T-VDDSDLVWIDHVTTARIGRQHIVLGTS------ADNRVTISYS 194 (359)
T ss_dssp SCCEEEETTCCCEEEESCEEEEECTTEETSCCSE-E-EESCCCEEEESCEEEEESSCSEEECSS------CCEEEEEESC
T ss_pred cceEEEecCCCCEEEeCcEEEecCCcccccCcee-E-ecCCceEEEEeeEeeccCcCceeeccc------ccccEEEECc
Confidence 4569998 899999999999864 3554 3 3578999999999885433222 1211 1158999999
Q ss_pred EecC
Q 011204 286 HFGV 289 (491)
Q Consensus 286 ~F~~ 289 (491)
+|.+
T Consensus 195 ~f~~ 198 (359)
T 1qcx_A 195 LIDG 198 (359)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9954
No 43
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.07 E-value=0.032 Score=57.13 Aligned_cols=133 Identities=15% Similarity=0.142 Sum_probs=84.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeeeC-----
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG----- 246 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~g----- 246 (491)
|.+.+++||+|.|..|.++ .|+ |.+. ++++|=|-+|-|....-.++--..+
T Consensus 119 I~i~~s~nVWIDHcs~s~~----------------------~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~ 176 (340)
T 3zsc_A 119 INVENSHHIWIDHITFVNG----------------------NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPE 176 (340)
T ss_dssp EEEESCEEEEEESCEEESC----------------------SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHH
T ss_pred EEEecCCcEEEEeeeeccC----------------------CccceEEecCCceEEEECcEeccCceeeEeCcCCCCccc
Confidence 7888899999999999864 233 6665 6899999999999866555421111
Q ss_pred ----CceEEEEcceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCC----------CcccCcccc-CCeEEEEcceE
Q 011204 247 ----STGITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVA----------LVQRMPRCR-RGYIHVVNNDF 310 (491)
Q Consensus 247 ----S~~ITISnn~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n----------~~qR~Pr~R-~G~vHvvNN~y 310 (491)
...||+-+|+|.+...-| .+. .-.+-+.+|+|. + .....=..| ..++-+-||||
T Consensus 177 ~d~g~~~vT~hhN~f~~~~~R~Pr~r---------~G~~Hv~NN~~~-n~~~~~~~~~~~~~yai~~~~~a~i~~E~N~F 246 (340)
T 3zsc_A 177 QAGQAYKVTYHHNYFKNLIQRMPRIR---------FGMAHVFNNFYS-MGLRTGVSGNVFPIYGVASAMGAKVHVEGNYF 246 (340)
T ss_dssp HHHHSCEEEEESCEEESCCBCTTEEE---------SSEEEEESCEEE-CCCCCSCSSCCSCCEEEEEETTCEEEEESCEE
T ss_pred cccCCcEEEEECeEecCCCCCCCccc---------CCeEEEEccEEE-CCccccccccceeeeeEecCCCCEEEEECcEE
Confidence 238999999997653211 111 125778899994 4 111111112 24789999999
Q ss_pred eCCcc--------eEe---ecCCCceEEEeC----cEEeCCCC
Q 011204 311 TSWEM--------YAI---GGSANPTINSQG----NRYTAPPD 338 (491)
Q Consensus 311 ~nw~~--------yai---ggs~~~~I~seg----NyF~~~~~ 338 (491)
.+... +.+ ..+....+...+ |.|.....
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~~~~~~~n~~~~~~~ 289 (340)
T 3zsc_A 247 MGYGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKE 289 (340)
T ss_dssp ECSCHHHHHTTCCBEEEEECTTTBCEEEECCGGGCCEEESBCC
T ss_pred ECCCcccccccccccccccCCCCceEEEecCcccceeeccCCC
Confidence 98643 122 223445677777 78876543
No 44
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.03 E-value=0.0016 Score=66.21 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=78.1
Q ss_pred eEEecC-CceEEeecceEE--------EecceEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceee
Q 011204 150 ELIINS-YKTIDGRGANVE--------ITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISI 220 (491)
Q Consensus 150 ~L~V~S-nkTI~G~Ga~v~--------I~Ggg~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI 220 (491)
.+.|.. .=||+|+|+.-- ....-.|.+..++ |.|++|++++. ....|.+
T Consensus 67 ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~ns---------------------p~~~i~i 124 (335)
T 1k5c_A 67 GINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNS---------------------PAQAISV 124 (335)
T ss_dssp EEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESC---------------------SSCCEEE
T ss_pred CEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECC---------------------CcceEEE
Confidence 455544 358888875310 0001136777888 99999999974 1246899
Q ss_pred eCCce-EEEEeeEeecC----------CCCeeEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecC
Q 011204 221 FGSQK-IWVDHCSLSYC----------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGV 289 (491)
Q Consensus 221 ~gs~n-VWIDHcS~S~~----------~DGliDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~ 289 (491)
.+++| |.|+++.+... .||. |+ .+++|+|++|.|...+...-+++. .+|++.++.+..
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGi-di--~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 193 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDGF-DV--SANNVTIQNCIVKNQDDCIAINDG--------NNIRFENNQCSG 193 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCSE-EE--ECSSEEEESCEEESSSCSEEEEEE--------EEEEEESCEEES
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCeE-cc--cCCeEEEEeeEEEcCCCEEEeeCC--------eeEEEEEEEEEC
Confidence 99999 99999999763 5664 86 899999999999988776666542 589999998864
No 45
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=96.99 E-value=0.017 Score=64.69 Aligned_cols=135 Identities=18% Similarity=0.025 Sum_probs=84.4
Q ss_pred eccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCC----CCeeEeeeCCceEEEEc
Q 011204 179 VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCT----DGLIDAIMGSTGITISN 254 (491)
Q Consensus 179 a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~----DGliDv~~gS~~ITISn 254 (491)
++||.|+|-+|++. ..|+|.|.+++||+|.+|.+.... ..-|.+..++.+|||+|
T Consensus 182 S~NV~I~Nc~I~nt---------------------GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~N 240 (772)
T 3gqn_A 182 SENIWIENCEATGF---------------------GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSN 240 (772)
T ss_dssp CEEEEEESCEEESC---------------------SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEE
T ss_pred cceEEEEeeEEEec---------------------CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEc
Confidence 78888888888742 459999999999999999995432 22345555678999999
Q ss_pred ceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCcccCccc------------cCCeEEEEcceEeCC--------
Q 011204 255 NYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------------RRGYIHVVNNDFTSW-------- 313 (491)
Q Consensus 255 n~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~------------R~G~vHvvNN~y~nw-------- 313 (491)
|.|.+..... +..+.+... ..+|.+.+|+.-++..+.+.|. -...+.+-|+.-...
T Consensus 241 c~~~nT~nGIRIKt~~~gg~---v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~ 317 (772)
T 3gqn_A 241 NRSKGCYGGIEIKAHGDAPA---AYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQD 317 (772)
T ss_dssp EEEESSSEEEEECCCTTSCC---CEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHH
T ss_pred eEEECCCcEEEEEEeCCCCc---cccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceee
Confidence 9999877654 333333211 2688888877755543323221 112355555553322
Q ss_pred --cceEeecCCCceEEEeCcEEeCCC
Q 011204 314 --EMYAIGGSANPTINSQGNRYTAPP 337 (491)
Q Consensus 314 --~~yaiggs~~~~I~segNyF~~~~ 337 (491)
.--++-.++-..+.+.++.++.-+
T Consensus 318 ~~~praL~vsay~~v~i~~~~~igd~ 343 (772)
T 3gqn_A 318 NATPRVLAVSAYYGVVINGLTGYTDD 343 (772)
T ss_dssp HCCCEEEEEESCEEEEEEEEEEECSC
T ss_pred CCCcceEEEEcCCCcEecCceeccCc
Confidence 111444455667777777777433
No 46
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=96.97 E-value=0.0079 Score=63.51 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=81.9
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeec---CCCCeeEeeeCCce
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY---CTDGLIDAIMGSTG 249 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~---~~DGliDv~~gS~~ 249 (491)
.|.+.+++||.|++|++++.. .| .+.+..++||.|+++++.. -.||. |+ ..+++
T Consensus 192 ~i~~~~~~nv~i~giti~nsp--------------~~-------~i~~~~~~nv~i~~v~I~~~~~NtDGi-di-~~s~n 248 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINSP--------------MW-------CIHPVLSENVIIRNIEISSTGPNNDGI-DP-ESCKY 248 (448)
T ss_dssp SEEEESCEEEEEESCEEESCS--------------SC-------SEEEESCEEEEEESCEEEECSTTCCSB-CC-BSCEE
T ss_pred EEEEEcccceEEEeeEEEeCC--------------Cc-------eEeeeccCCEEEEeEEEeeccCCCccc-cc-cCCcC
Confidence 378889999999999999741 12 5888999999999999986 57887 64 57999
Q ss_pred EEEEcceeccCCceeeeccCCc-ccCC--C-CeEEEEEeeEe--cCCC--cccCccccCC--eEEEEcceEeCC
Q 011204 250 ITISNNYFSHHNEVMLLGHNDK-YALD--M-GMQVTIAFNHF--GVAL--VQRMPRCRRG--YIHVVNNDFTSW 313 (491)
Q Consensus 250 ITISnn~f~~h~k~mL~G~sds-~~~D--~-g~~VTihhN~F--~~n~--~qR~Pr~R~G--~vHvvNN~y~nw 313 (491)
|+|++|.|...+...-+.+... +..+ . -.+|+|.+|++ ..+. ..=--....+ .++|-|+.+.+-
T Consensus 249 V~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t 322 (448)
T 3jur_A 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNV 322 (448)
T ss_dssp EEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESC
T ss_pred EEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecc
Confidence 9999999998888766654321 1111 1 15899999988 3221 0000000111 577888888654
No 47
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=96.87 E-value=0.007 Score=66.28 Aligned_cols=90 Identities=19% Similarity=0.120 Sum_probs=63.1
Q ss_pred eccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCC----CCeeEeeeCCceEEEEc
Q 011204 179 VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCT----DGLIDAIMGSTGITISN 254 (491)
Q Consensus 179 a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~----DGliDv~~gS~~ITISn 254 (491)
++||.|+|-+|++. ..|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||+|
T Consensus 182 S~NV~I~Nc~I~~t---------------------GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~N 240 (609)
T 3gq8_A 182 SENIWIENCEATGF---------------------GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSN 240 (609)
T ss_dssp CEEEEEESCEEESC---------------------SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEES
T ss_pred ceeEEEEeeEEEec---------------------CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEe
Confidence 78888888888742 459999999999999999995432 22345555678999999
Q ss_pred ceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCc
Q 011204 255 NYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALV 292 (491)
Q Consensus 255 n~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~ 292 (491)
|.|.+..... +.-+.+.. ...+|.+.+|++-+|..
T Consensus 241 c~i~nt~~GIrIKt~~~~~---~v~NV~I~n~vs~~nvr 276 (609)
T 3gq8_A 241 NRSKGCYGGIEIKAHGDAP---AAYNISINGHMSVEDVR 276 (609)
T ss_dssp EEEESSSEEEEEEECTTSC---CCEEEEEEEEEEESCSE
T ss_pred eEEECCCCEEEEEecCCCC---ccccEEEECCEeecCce
Confidence 9999876644 34343321 12578888877755543
No 48
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.86 E-value=0.028 Score=57.15 Aligned_cols=117 Identities=20% Similarity=0.198 Sum_probs=73.7
Q ss_pred EEEee-eccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeeeC----
Q 011204 174 LTLQY-VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG---- 246 (491)
Q Consensus 174 i~i~~-a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~g---- 246 (491)
|.+.. ++||+|.|..|.+..+. .. .....|+ +.+. ++++|=|-+|-|....-+++--..+
T Consensus 123 I~i~~~s~nVWIDH~s~s~~~~g-~~------------~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~ 189 (326)
T 3vmv_A 123 IEVTDDSKNVWIDHNEFYSEFPG-NG------------DSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASL 189 (326)
T ss_dssp EEEETTCEEEEEESCEEECCSST-TS------------CTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGG
T ss_pred EEEecCCCcEEEEeeEEeccccC-Cc------------CccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCcc
Confidence 77876 89999999999875321 00 0112344 5564 6889999999998765555421111
Q ss_pred -CceEEEEcceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCcccCccccC-CeEEEEcceEeCC
Q 011204 247 -STGITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRR-GYIHVVNNDFTSW 313 (491)
Q Consensus 247 -S~~ITISnn~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~-G~vHvvNN~y~nw 313 (491)
-..||+-+|+|.+...-+ .+. .-++-+.+|+| .+...+.-..+. +++-+-||||.+.
T Consensus 190 ~~~~vT~~~N~f~~~~~R~Pr~r---------~G~~Hv~NN~~-~n~~~~~~~~~~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 190 APDKITYHHNYFNNLNSRVPLIR---------YADVHMFNNYF-KDINDTAINSRVGARVFVENNYFDNV 249 (326)
T ss_dssp CCEEEEEESCEEEEEEECTTEEE---------SCEEEEESCEE-EEESSCSEEEETTCEEEEESCEEEEE
T ss_pred cCccEEEEeeEecCCcCcCCccc---------CCcEEEEccEE-ECCCceEEeecCCcEEEEEceEEECC
Confidence 137999999997532210 111 12577889999 444444433343 4788999999875
No 49
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=96.57 E-value=0.051 Score=55.48 Aligned_cols=133 Identities=14% Similarity=0.180 Sum_probs=81.2
Q ss_pred hHHHHHhcC---CCeEEEEccCeeEEecceEEec-CCceEEeecce-EEEecc------------------eEEEEeeec
Q 011204 124 TLRHAVIQT---EPIWITFASNMLIKLKHELIIN-SYKTIDGRGAN-VEITGN------------------GCLTLQYVS 180 (491)
Q Consensus 124 sLR~Av~~~---~Pr~IvF~~sg~I~L~~~L~V~-SnkTI~G~Ga~-v~I~Gg------------------g~i~i~~a~ 180 (491)
|+.+||.+- ..+++|+=..|+- ++.|.|+ +++||.|.|.. ..|.+. ..+++ .++
T Consensus 20 TIq~Ai~aap~~~~~~~I~I~~G~Y--~E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v-~a~ 96 (342)
T 2nsp_A 20 TIADAIASAPAGSTPFVILIKNGVY--NERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI-SAK 96 (342)
T ss_dssp SHHHHHHTSCSSSSCEEEEECSEEE--ECCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE-CSB
T ss_pred hHHHHHHhcccCCCcEEEEEeCCEE--EEEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEE-ECC
Confidence 688888542 1344555556653 4677884 68999999854 555432 23666 689
Q ss_pred cEEEEeeEEEeeccCC--CccccCCCCccccCcCCCCCceee--e-CCceEEEEeeEeecCCCCeeEeeeCCceEEEEcc
Q 011204 181 HVIIHNVHIHHCKPSG--NTMIASSPTHVGYRGKSDGDGISI--F-GSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN 255 (491)
Q Consensus 181 NVIIrnL~Ir~~~~~g--~~~v~~s~~~~g~r~~~dgDaIsI--~-gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn 255 (491)
+++++||+|++..... ...-+..| ....+..++-+ . .++++.+.+|.|....|.|.+- ....-+.+|
T Consensus 97 ~f~a~nlt~~Nt~~~~~~~~~~~~~~-----~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~---~gr~~~~~c 168 (342)
T 2nsp_A 97 DFSAQSLTIRNDFDFPANQAKSDSDS-----SKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVS---GGRSFFSDC 168 (342)
T ss_dssp SCEEEEEEEEECCCHHHHHHSCTTCT-----TCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEEC---SSEEEEESC
T ss_pred CEEEEeeEEEccccccccccccccCC-----ccccCCceEEEEEeeccCcEEEEeeEEecccceEEEC---CCCEEEEcC
Confidence 9999999999853100 00000000 00112333334 3 5899999999999999988752 346777888
Q ss_pred eeccCCceeeecc
Q 011204 256 YFSHHNEVMLLGH 268 (491)
Q Consensus 256 ~f~~h~k~mL~G~ 268 (491)
++...-. .++|.
T Consensus 169 ~I~G~vD-FIFG~ 180 (342)
T 2nsp_A 169 RISGTVD-FIFGD 180 (342)
T ss_dssp EEEESEE-EEEES
T ss_pred EEEeceE-EEeCC
Confidence 8874421 34554
No 50
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.32 E-value=0.043 Score=56.50 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=71.3
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCcee--eeCCceEEEEeeEeecCC------C-----Ce
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGIS--IFGSQKIWVDHCSLSYCT------D-----GL 240 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIs--I~gs~nVWIDHcS~S~~~------D-----Gl 240 (491)
|.+.+++||+|.|.+|.++. +. .+. ..++++|=|-+|-|.... + +.
T Consensus 156 I~i~~s~nVwIDHcs~s~~~---d~------------------~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~ 214 (359)
T 1idk_A 156 ITLDDCDLVWIDHVTTARIG---RQ------------------HYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAI 214 (359)
T ss_dssp EEECSCEEEEEESCEEEEES---SC------------------SEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCE
T ss_pred eeecCCCcEEEEeeEeecCC---CC------------------cEEecccCcceEEEECcEecCCcccccccCccccceE
Confidence 78888999999999998741 11 111 457888999999887532 1 22
Q ss_pred eEeeeCCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccC-CeEEEEcceEeCC
Q 011204 241 IDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRR-GYIHVVNNDFTSW 313 (491)
Q Consensus 241 iDv~~gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~-G~vHvvNN~y~nw 313 (491)
+ +...++.||+-+|+|.+...- ... -..+..+-+.+|+| .+...+.-..+. +++.+.||||.+.
T Consensus 215 ~-L~G~sd~vT~hhN~f~~~~~R-----~Pr--~r~g~~~hv~NN~~-~n~~~~~i~~~~~~~i~~e~N~F~~~ 279 (359)
T 1idk_A 215 Y-LDGDADLVTMKGNYIYHTSGR-----SPK--VQDNTLLHAVNNYW-YDISGHAFEIGEGGYVLAEGNVFQNV 279 (359)
T ss_dssp E-ECCSSCEEEEESCEEESBCSC-----TTE--ECTTCEEEEESCEE-EEEEEEEEEECTTCEEEEESCEEEEE
T ss_pred E-EEecCCCeEEEceEeecCccc-----Ccc--ccCCceEEEECCEE-ecccceEEeccCCcEEEEEccEEECC
Confidence 2 234468999999999865321 110 00123688899999 443333333333 5789999999865
No 51
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.31 E-value=0.033 Score=59.80 Aligned_cols=18 Identities=11% Similarity=-0.066 Sum_probs=13.8
Q ss_pred EEEeeeccEEEEeeEEEee
Q 011204 174 LTLQYVSHVIIHNVHIHHC 192 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~ 192 (491)
+.+. .+++.|+|.+|++.
T Consensus 121 iav~-G~~~~I~nn~I~~~ 138 (506)
T 1dbg_A 121 VAIY-GSYNRITACVFDCF 138 (506)
T ss_dssp EEEC-SSSCEEESCEEESC
T ss_pred eEEe-cCCeEEEeeEEEcC
Confidence 3443 48999999999986
No 52
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=96.28 E-value=0.15 Score=52.67 Aligned_cols=135 Identities=18% Similarity=0.235 Sum_probs=82.1
Q ss_pred hHHHHHhc----CCCeEEEEccCeeEEecceEEec-CCceEEeecce-EEEecc------------------eEEEEeee
Q 011204 124 TLRHAVIQ----TEPIWITFASNMLIKLKHELIIN-SYKTIDGRGAN-VEITGN------------------GCLTLQYV 179 (491)
Q Consensus 124 sLR~Av~~----~~Pr~IvF~~sg~I~L~~~L~V~-SnkTI~G~Ga~-v~I~Gg------------------g~i~i~~a 179 (491)
|+.+||.+ +.+ ++++=..|+- ++.|.|+ +++||.|.+.. ..|.+. ..+++ .+
T Consensus 46 TIq~Ai~aa~~~~~~-~~I~I~~G~Y--~E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V-~a 121 (364)
T 3uw0_A 46 SINAALKSAPKDDTP-FIIFLKNGVY--TERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLV-NA 121 (364)
T ss_dssp CHHHHHHHSCSSSSC-EEEEECSEEE--CCCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEE-CS
T ss_pred cHHHHHhhcccCCCc-EEEEEeCCEE--EEEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEE-EC
Confidence 46777743 233 3444445643 4567774 68999999863 455532 23556 68
Q ss_pred ccEEEEeeEEEeeccCC--CccccCCCCccccCcCCCCCceeee-CCceEEEEeeEeecCCCCeeEeeeCCceEEEEcce
Q 011204 180 SHVIIHNVHIHHCKPSG--NTMIASSPTHVGYRGKSDGDGISIF-GSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNY 256 (491)
Q Consensus 180 ~NVIIrnL~Ir~~~~~g--~~~v~~s~~~~g~r~~~dgDaIsI~-gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~ 256 (491)
+|++++||+|++..... +..-...|... .....=|+.+. .++++.+.+|.|....|.+.+ +.+....+.+|+
T Consensus 122 ~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~---~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~--~~~gr~yf~~c~ 196 (364)
T 3uw0_A 122 PNFTAENLTIRNDFDFPANKKKADTDPTKL---KDTQAVALLLAENSDKARFKAVKLEGYQDTLYS--KTGSRSYFSDCE 196 (364)
T ss_dssp TTCEEEEEEEEECCCHHHHHHSCTTCTTCC---SCCCCCSEEECTTCEEEEEEEEEEECSBSCEEE--CTTCEEEEESCE
T ss_pred CCEEEEeeeeEcCCcccccccccccccccc---cCCccEEEEEecCCCeEEEEeeEEEecccceEe--CCCCCEEEEcCE
Confidence 99999999999863100 00000000000 01233456665 589999999999999999975 335678888888
Q ss_pred eccCCceeeecc
Q 011204 257 FSHHNEVMLLGH 268 (491)
Q Consensus 257 f~~h~k~mL~G~ 268 (491)
+...-. .++|.
T Consensus 197 I~GtvD-FIFG~ 207 (364)
T 3uw0_A 197 ISGHVD-FIFGS 207 (364)
T ss_dssp EEESEE-EEEES
T ss_pred EEcCCC-EECCc
Confidence 874321 34554
No 53
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.09 E-value=0.16 Score=53.08 Aligned_cols=147 Identities=16% Similarity=0.093 Sum_probs=84.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeeeC-----
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG----- 246 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~g----- 246 (491)
|.+.+++||+|.|..|.++... ..+.|..+|.. ..-.|+ |.+. ++++|=|-+|-|....-+++--..+
T Consensus 186 I~i~~s~nVWIDHcs~s~~~~~----d~~~~~~~G~~-~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d 260 (399)
T 2o04_A 186 ITINGGTHIWIDHCTFNDGSRP----DSTSPKYYGRK-YQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSD 260 (399)
T ss_dssp EEEESCEEEEEESCEEECTTCC----GGGSCEETTEE-CCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGG
T ss_pred EEecCCCcEEEEeeeeecCCCc----cccccccccce-eeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccc
Confidence 8888999999999999976311 11112233321 112243 5666 6899999999998765554421111
Q ss_pred --CceEEEEcceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCccc-------Ccccc-CCeEEEEcceEeCCcc
Q 011204 247 --STGITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQR-------MPRCR-RGYIHVVNNDFTSWEM 315 (491)
Q Consensus 247 --S~~ITISnn~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR-------~Pr~R-~G~vHvvNN~y~nw~~ 315 (491)
.-.||+-+|+|.+...-| .+ +.-++-+.+|+| .|.... .=-.+ .+++-+.||||.+...
T Consensus 261 ~g~~~vT~h~N~f~~~~~R~Pr~---------R~G~~Hv~NN~~-~n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~~ 330 (399)
T 2o04_A 261 DGKLKITLHHNRYKNIVQAAPRV---------RFGQVHVYNNYY-EGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGL 330 (399)
T ss_dssp TTCCCEEEESCEEEEEEECTTEE---------SSCEEEEESCEE-ECCTTCSSSCCCCSEEECTTCEEEEESCEEECTTC
T ss_pred cCceeEEEECcEecCCcccCCCc---------ccceEEEEcceE-ECCCCCCccceeeEeccCCCcEEEEEceEEECCCC
Confidence 128999999997543211 11 112577889999 333221 10112 2478899999987521
Q ss_pred e---Eeec-CCCceEEEeCcEEeC
Q 011204 316 Y---AIGG-SANPTINSQGNRYTA 335 (491)
Q Consensus 316 y---aigg-s~~~~I~segNyF~~ 335 (491)
. .+.. +.+..+...+|+|..
T Consensus 331 ~~~~~~~~~s~~~~~~~~gn~~~g 354 (399)
T 2o04_A 331 SAAKTISVFSGGTALYDSGTLLNG 354 (399)
T ss_dssp CSGGGEEECTTCCBCEEESCEETT
T ss_pred CccceeeeccCCceEEEeCceecC
Confidence 1 0111 022345678888863
No 54
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=95.55 E-value=0.53 Score=48.90 Aligned_cols=84 Identities=18% Similarity=0.137 Sum_probs=47.2
Q ss_pred EEEeeeccEEEEeeEEEeeccCC--------CccccCCCCccccCc----CCCCCceeeeC--CceEEEEeeEeecCCCC
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSG--------NTMIASSPTHVGYRG----KSDGDGISIFG--SQKIWVDHCSLSYCTDG 239 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g--------~~~v~~s~~~~g~r~----~~dgDaIsI~g--s~nVWIDHcS~S~~~DG 239 (491)
|.+.. ++++|+|++|++....| ...+.....+ +-.. ...+|+|.+.. .....|.+|.+.+-.|.
T Consensus 132 I~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~-~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~dd 209 (400)
T 1ru4_A 132 AYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAY-RNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209 (400)
T ss_dssp EEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEE-CCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSC
T ss_pred EEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEE-cccCccccCcccceEEEEecccCCeEEECCEEeecCCC
Confidence 77765 77889999999753210 0111111000 0000 12357777653 36667778877766655
Q ss_pred eeEeeeCCceEEEEcceecc
Q 011204 240 LIDAIMGSTGITISNNYFSH 259 (491)
Q Consensus 240 liDv~~gS~~ITISnn~f~~ 259 (491)
-+|+......|||.+|+..+
T Consensus 210 Gidl~~~~~~v~i~nn~a~~ 229 (400)
T 1ru4_A 210 GFDLFDSPQKVVIENSWAFR 229 (400)
T ss_dssp SEECTTCCSCCEEESCEEES
T ss_pred cEEEEecCCCEEEEeEEEEC
Confidence 55665555567888887654
No 55
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=95.11 E-value=0.18 Score=51.72 Aligned_cols=127 Identities=18% Similarity=0.138 Sum_probs=75.6
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeee-----
Q 011204 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIM----- 245 (491)
Q Consensus 173 ~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~----- 245 (491)
.|.|.+++||+|.|..|.++.... .+.|..+|. ...-.|+ +.+. ++++|=|.+|.|....-+++--..
T Consensus 135 aI~i~~s~nVWIDH~s~s~~~~~d----~~~~~~~G~-~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~ 209 (355)
T 1pcl_A 135 AAVIDNSTNVWVDHVTISDGSFTD----DKYTTKDGE-KYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGS 209 (355)
T ss_pred eEEecCCCcEEEEeeEEeccccCc----cccccccCc-cccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcc
Confidence 488889999999999999864211 011112221 1112344 4565 799999999999987655542111
Q ss_pred ---CCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccC-------cccc-CCeEEEEcceEeCC
Q 011204 246 ---GSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRM-------PRCR-RGYIHVVNNDFTSW 313 (491)
Q Consensus 246 ---gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~-------Pr~R-~G~vHvvNN~y~nw 313 (491)
+.-+||+-+|+|.+...-|- .-+.-.+-+.+|+| .+..... =..+ .+++-+-||||.+-
T Consensus 210 ~d~g~~~vT~hhN~f~~~~~R~P--------rvR~G~~Hv~NN~~-~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 210 QDSGKLRVTFHNNVFDRVTERAP--------RVRFGSIHAYNNVY-LGDVKHSVYPYLYSFGLGTSGSILSESNSFTLS 279 (355)
T ss_pred cccCcceEEEECcEEeCCcccCC--------ceecceEEEEcceE-EcccCCCccccceEecCCCCcEEEEEccEEECC
Confidence 11269999999976532110 01112477888999 3322110 0112 24788999999865
No 56
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=95.11 E-value=0.21 Score=53.10 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=67.3
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeeeCCceEEEEeeEeecCCCCeeEeee-------
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIFGSQKIWVDHCSLSYCTDGLIDAIM------- 245 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~gs~nVWIDHcS~S~~~DGliDv~~------- 245 (491)
+.+ .++||.|+|++|... .+++| +...+++||.|++|.|.. .+|+ .++.
T Consensus 170 i~i-~s~nV~I~n~~I~~g--------------------ddgiGs~~~~~~~NV~V~n~~~~g-g~GI-rIktg~d~IG~ 226 (464)
T 1h80_A 170 RLH-WSRNGIIERIKQNNA--------------------LFGYGLIQTYGADNILFRNLHSEG-GIAL-RMETDNLLMKN 226 (464)
T ss_dssp EEE-EEEEEEEEEEEEESC--------------------CTTCEEEEESEEEEEEEEEEEEES-SEEE-EEECCCHHHHH
T ss_pred cee-eccCEEEeceEEecC--------------------CCeEEecccCCEeEEEEEeeEEEC-CCEE-EEEeCCceecc
Confidence 344 789999999999862 13456 566789999999999887 3332 3332
Q ss_pred ----CCceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcccCccccCCeE
Q 011204 246 ----GSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRGYI 303 (491)
Q Consensus 246 ----gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R~G~v 303 (491)
...+|+|+||.|.+......++.+.. ...+|+|.+-.. .+ ....-++..++.
T Consensus 227 ~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~~----~isnItfeNI~~-t~-~~~aI~i~q~y~ 282 (464)
T 1h80_A 227 YKQGGIRNIFADNIRCSKGLAAVMFGPHFM----KNGDVQVTNVSS-VS-CGSAVRSDSGFV 282 (464)
T ss_dssp HTCCEEEEEEEEEEEEESSSEEEEEECTTC----BCCCEEEEEEEE-ES-SSCSEEECCCCC
T ss_pred CCCCcEEEEEEEeEEEECCceeEEEeCCCc----eEeEEEEEEEEE-Ec-cceeEEEecCcc
Confidence 25799999999999887777773221 114788876665 44 333334444443
No 57
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.04 E-value=0.17 Score=51.42 Aligned_cols=140 Identities=16% Similarity=0.130 Sum_probs=83.1
Q ss_pred EEEe-----eeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeee-
Q 011204 174 LTLQ-----YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIM- 245 (491)
Q Consensus 174 i~i~-----~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~- 245 (491)
|.+. .++||+|.|..|.+.... +.. . ...-.|+ |.+. ++++|=|-+|-|....-+++--..
T Consensus 116 I~i~g~~~~~s~nVWIDH~s~s~~~~~---~~~-~-------~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd 184 (330)
T 2qy1_A 116 ISLEGNSSGEPSKIWVDHNTVFASLTK---CSG-A-------GDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSD 184 (330)
T ss_dssp EEEECBTTBCCEEEEEESCEEECCCCC---CTT-C-------TTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSST
T ss_pred eeeccccCcccccEEEEeEEEEccccc---ccc-C-------CcceeecccccccCcceEEEEcceeccCCeEEEECCCC
Confidence 7787 599999999999753210 000 0 0112244 5655 689999999999875554442110
Q ss_pred -----CCceEEEEcceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCcccCcccc-CCeEEEEcceEeCCcc--e
Q 011204 246 -----GSTGITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEM--Y 316 (491)
Q Consensus 246 -----gS~~ITISnn~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R-~G~vHvvNN~y~nw~~--y 316 (491)
+...||+-+|+|.+...-| .+ +...+-+.+|+| .+.....-..+ .+++-+.||||.+... .
T Consensus 185 ~~~~~~~~~vT~h~N~f~~~~~R~Pr~---------r~G~~hv~NN~~-~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 185 SDTKNSAARTTYHHNRFENVESRVPLQ---------RFGLSHIYNNYF-NNVTTSGINVRMGGIAKIESNYFENIKNPVT 254 (330)
T ss_dssp TCGGGGGCEEEEESCEEEEEEECTTEE---------ESSEEEEESCEE-EEECSCSEEEETTCEEEEESCEEEEEESSEE
T ss_pred ccccCCCceEEEECcEEcCCCCCCCce---------ecceEEEEeeEE-EcccceEeccCCCcEEEEEccEEECCCCcee
Confidence 1159999999997543211 11 112577889999 44444433333 3578999999986422 1
Q ss_pred EeecCCCceEEEeCcEEeC
Q 011204 317 AIGGSANPTINSQGNRYTA 335 (491)
Q Consensus 317 aiggs~~~~I~segNyF~~ 335 (491)
....+.......++| |..
T Consensus 255 ~~~~~~~g~~~~~~n-~~~ 272 (330)
T 2qy1_A 255 SRDSSEIGYWDLINN-YVG 272 (330)
T ss_dssp ECSSSSBCEEEEESC-EEC
T ss_pred eccCCCceeEEEeCC-ccc
Confidence 111223345777888 665
No 58
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=94.89 E-value=0.27 Score=51.54 Aligned_cols=147 Identities=16% Similarity=0.072 Sum_probs=85.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeeeC-----
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG----- 246 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~g----- 246 (491)
|.|.+++||+|.|..|.++... ..+.|..+|.. ..-.|+ |.+. ++++|=|-+|.|....-+++--..+
T Consensus 192 I~i~~s~nVWIDHcs~s~~~~~----d~~~~~~~Gr~-~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d 266 (416)
T 1vbl_A 192 ISIEGSSHIWIDHNTFTDGDHP----DRSLGTYFGRP-FQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMAD 266 (416)
T ss_dssp EEEESCEEEEEESCEEECTTCC----GGGSCEETTEE-CCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGG
T ss_pred EEecCCceEEEEccEEecCCCc----ccccccccCcc-eeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCccc
Confidence 8888999999999999976321 11122233321 112344 5566 6899999999998765554421111
Q ss_pred --CceEEEEcceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCccc----C--cccc-CCeEEEEcceEeCCc--
Q 011204 247 --STGITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQR----M--PRCR-RGYIHVVNNDFTSWE-- 314 (491)
Q Consensus 247 --S~~ITISnn~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR----~--Pr~R-~G~vHvvNN~y~nw~-- 314 (491)
.-.||+-+|+|.+...-| .+ +.-++-+.+|+|. |.... + =..+ .+++-+-||||..-.
T Consensus 267 ~g~~~VT~hhN~f~~~~~R~Pr~---------R~G~~Hv~NN~~~-n~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~ 336 (416)
T 1vbl_A 267 SGHLRVTLHHNYYKNVTQRLPRV---------RFGQVHIYNNYYE-FSNLADYDFQYAWGVGVFSQIYAQNNYFSFDWDI 336 (416)
T ss_dssp TTCCCEEEESCEEEEEEECSSEE---------SSCEEEEESCEEE-ECTTSSSCCCCSEEEETTCEEEEESCEEEESSCC
T ss_pred CCceEEEEECcEecCCccCCccc---------ccceEEEEcceEE-CCCCCcccceeEeccCCCcEEEEECCEEECCCCC
Confidence 126999999997543211 11 1125778899993 32221 0 0011 247889999998541
Q ss_pred ----ceEeecCCCceEEEeCcEEeC
Q 011204 315 ----MYAIGGSANPTINSQGNRYTA 335 (491)
Q Consensus 315 ----~yaiggs~~~~I~segNyF~~ 335 (491)
....-......+...+|+|..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~gn~~~~ 361 (416)
T 1vbl_A 337 DPSLIIKVWSKNEESMYETGTIVDL 361 (416)
T ss_dssp CGGGSEEEECSSCCEEEEESCEEEE
T ss_pred CccceeeeeccCCceEEecCCEEee
Confidence 111111134467778999963
No 59
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=94.88 E-value=0.32 Score=48.79 Aligned_cols=68 Identities=9% Similarity=0.083 Sum_probs=41.6
Q ss_pred hHHHHHhc---CCCeEEEEccCeeEEecc-------eEEecCCceEEeecce-EEEe--cce-----EEEEe----eecc
Q 011204 124 TLRHAVIQ---TEPIWITFASNMLIKLKH-------ELIINSYKTIDGRGAN-VEIT--GNG-----CLTLQ----YVSH 181 (491)
Q Consensus 124 sLR~Av~~---~~Pr~IvF~~sg~I~L~~-------~L~V~SnkTI~G~Ga~-v~I~--Ggg-----~i~i~----~a~N 181 (491)
.|++|+.+ .++-+|+|- .|+-.++. .|.+.|++||.|.|.. ..|. ... .+... ...+
T Consensus 21 aiq~Ai~~a~~~gg~~v~~p-~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~~~~~~~~~~~~~~~~g~~~~~ 99 (377)
T 2pyg_A 21 SIQAAIDAAYAAGGGTVYLP-AGEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLIDGSDQKITGMVRSAYGEETSN 99 (377)
T ss_dssp HHHHHHHHHHHTTSEEEEEC-SEEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEECTTCBSCEEEEEECCTTSCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEC-CeEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEecCCCccCccceEeccCCCcceE
Confidence 57777643 346677775 47766653 7888999999998743 3332 110 01111 1256
Q ss_pred EEEEeeEEEee
Q 011204 182 VIIHNVHIHHC 192 (491)
Q Consensus 182 VIIrnL~Ir~~ 192 (491)
+-+++|+|...
T Consensus 100 ~~~~~~~I~G~ 110 (377)
T 2pyg_A 100 FGMRDLTLDGN 110 (377)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEECC
Confidence 77888888763
No 60
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=94.21 E-value=0.17 Score=51.85 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=83.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeeeCC---c
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMGS---T 248 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~gS---~ 248 (491)
|.+.+++||+|.|..|.+... .+. ..+ . .....|+ +.+. ++++|=|.+|-|....-.++.-...+ .
T Consensus 133 I~i~~s~nVWIDH~s~s~~~~---~~~-g~~-~----~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g~ 203 (353)
T 1air_A 133 IRVDDSPNVWVDHNELFAANH---ECD-GTP-D----NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGR 203 (353)
T ss_dssp EEEESCCSEEEESCEEECCSC---CCT-TCG-G----GCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCCC
T ss_pred EEeeCCCcEEEEeeEEecCCc---ccc-ccc-c----cccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCCc
Confidence 888899999999999986421 000 000 0 0112344 4554 78999999999987544443211111 4
Q ss_pred eEEEEcceeccCCcee-eeccCCcccCCCCeEEEEEeeEecCCCcccCcccc-CCeEEEEcceEeCCcc--eE-eecCCC
Q 011204 249 GITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEM--YA-IGGSAN 323 (491)
Q Consensus 249 ~ITISnn~f~~h~k~m-L~G~sds~~~D~g~~VTihhN~F~~n~~qR~Pr~R-~G~vHvvNN~y~nw~~--ya-iggs~~ 323 (491)
+||+-+|+|.++..-+ ++. .-++-+.+|+| .|...+.-..+ .+++-+.||||.+... .. ..++..
T Consensus 204 ~vT~hhN~f~~~~~R~Pr~r---------~G~~Hv~NN~~-~n~~~~~~~~~~~~~i~~e~N~F~~~~~p~~~~~~~~~~ 273 (353)
T 1air_A 204 NITYHHNYYNDVNARLPLQR---------GGLVHAYNNLY-TNITGSGLNVRQNGQALIENNWFEKAINPVTSRYDGKNF 273 (353)
T ss_dssp EEEEESCEEEEEEECSCEEE---------SSEEEEESCEE-EEESSCSEEEETTCEEEEESCEEEEEESSEEECSSSSSC
T ss_pred eEEEEceEEcCCcCCCCCCc---------CceEEEEccEE-ECCCCceeccCCCcEEEEEceEEECCCCceEecCCCCCC
Confidence 7999999997643211 111 12577889999 44343332233 3578999999987522 11 122334
Q ss_pred ceEEEeCcEEe
Q 011204 324 PTINSQGNRYT 334 (491)
Q Consensus 324 ~~I~segNyF~ 334 (491)
......+|.|.
T Consensus 274 g~~~~~~n~~~ 284 (353)
T 1air_A 274 GTWVLKGNNIT 284 (353)
T ss_dssp CEEEEESCSCC
T ss_pred ceeEecccccc
Confidence 56666777765
No 61
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=93.82 E-value=0.13 Score=56.20 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=26.1
Q ss_pred EEEEeeEeecCCCCeeEe-eeCCc-eEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEe
Q 011204 226 IWVDHCSLSYCTDGLIDA-IMGST-GITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHF 287 (491)
Q Consensus 226 VWIDHcS~S~~~DGliDv-~~gS~-~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F 287 (491)
|+|.+|.+... |.+|-+ +.++. +++++ .+.......-+|+..+ ..-.+|++.+ ++
T Consensus 233 V~I~nc~I~tG-DDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~---ggV~NV~V~N-rI 289 (600)
T 2x6w_A 233 TVYVNCPYSGV-ESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVN---GYCRGAYVVM-HA 289 (600)
T ss_dssp EEEECSSSEEE-ESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEE---EESEEEEEEE-CG
T ss_pred EEEEeeEEecC-CcEEEEecCCCcCCeEEE--EEcCCCCcEEeccccc---CcEEEEEEEE-EE
Confidence 77777777654 444455 55543 24555 2222222344554211 1114677766 44
No 62
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=93.64 E-value=0.23 Score=54.08 Aligned_cols=87 Identities=15% Similarity=0.078 Sum_probs=54.6
Q ss_pred EEEeeeccE--EEEeeEEEeeccC-CCccccCCCCcc-ccCcCCCCCceeeeCCceEEEEeeEeecCCCCe-eEee---e
Q 011204 174 LTLQYVSHV--IIHNVHIHHCKPS-GNTMIASSPTHV-GYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGL-IDAI---M 245 (491)
Q Consensus 174 i~i~~a~NV--IIrnL~Ir~~~~~-g~~~v~~s~~~~-g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGl-iDv~---~ 245 (491)
+.+..++|| .|+|+++....+. .|+..-...... +..-....|+|.|.. +||.|.+|.+..+..+. |.+. .
T Consensus 350 i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~~NV~I~nc~I~~gDDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g 428 (574)
T 1ogo_X 350 MDFNGNSGISSQISDYKQVGAFFFQTDGPEIYPNSVVHDVFWHVNDDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSR 428 (574)
T ss_dssp EEECSSSCEEEEEEEEEEECCCSTTCCCCBCCTTCEEEEEEEEESSCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCC
T ss_pred EeecCCCChhhEEEeeEeeCCCCCCCccCcccCCEEEEeeEEECCCCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCC
Confidence 334579999 9999998753211 222111111000 000135678999865 99999999998766543 5432 3
Q ss_pred CCceEEEEcceeccCC
Q 011204 246 GSTGITISNNYFSHHN 261 (491)
Q Consensus 246 gS~~ITISnn~f~~h~ 261 (491)
...+|+|+||.|.+..
T Consensus 429 ~V~NV~v~N~~i~~~~ 444 (574)
T 1ogo_X 429 DISGVTIDTLNVIHTR 444 (574)
T ss_dssp CEEEEEEEEEEEEECC
T ss_pred cEEEEEEEeEEEECCc
Confidence 4589999999998753
No 63
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=93.00 E-value=0.91 Score=48.27 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=29.2
Q ss_pred hHHHHHh----cCCCeEEEEccCe----eEEecceEEecCCceEEeecce
Q 011204 124 TLRHAVI----QTEPIWITFASNM----LIKLKHELIINSYKTIDGRGAN 165 (491)
Q Consensus 124 sLR~Av~----~~~Pr~IvF~~sg----~I~L~~~L~V~SnkTI~G~Ga~ 165 (491)
.+.+|+. +.++.+|+|-. | +-.+...|.+.++++|.|.+..
T Consensus 70 AIQkAIdaA~a~~GGGtVyVPa-G~~~~tYlvt~tI~LkSnV~L~Ge~~A 118 (514)
T 2vbk_A 70 AIQNAIDAVASLPSGGELFIPA-SNQAVGYIVGSTLLIPGGVNIRGVGKA 118 (514)
T ss_dssp HHHHHHHHHHTSTTCEEEECCC-CSSTTCEEESSCEEECTTEEEECCSTT
T ss_pred HHHHHHHHHhhcCCCeEEEECC-CCcceeEEECCeEEecCCeEEEEecCc
Confidence 4676664 23677777754 5 6667778888999999998543
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=92.83 E-value=0.4 Score=49.31 Aligned_cols=127 Identities=18% Similarity=0.128 Sum_probs=74.3
Q ss_pred EEEEee-eccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCc-eeee-CCceEEEEeeEeecCCCCeeEeeeC---
Q 011204 173 CLTLQY-VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG--- 246 (491)
Q Consensus 173 ~i~i~~-a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDa-IsI~-gs~nVWIDHcS~S~~~DGliDv~~g--- 246 (491)
.|.|.+ ++||+|.|..|.++... ..+.|..+|. ...-.|+ |.+. ++++|=|-+|.|....-+++--..+
T Consensus 145 aI~i~~~s~nVWIDHcs~s~~~~~----~~~~~~~~G~-~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~ 219 (361)
T 1pe9_A 145 AMNITNGAHHVWIDHVTISDGNFT----DDMYTTKDGE-TYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNG 219 (361)
T ss_dssp SEEEETTCEEEEEESCEEECTTSC----GGGCCEETTE-ECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCH
T ss_pred eEEeecCCceEEEEccEeeccccc----ccccccccCc-ceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCc
Confidence 388888 99999999999986321 0111222221 1122344 5665 6899999999998765554421111
Q ss_pred -----CceEEEEcceeccCCceeeeccCCcccCCCCeEEEEEeeEecCCCcc-------cCcccc-CCeEEEEcceEeCC
Q 011204 247 -----STGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQ-------RMPRCR-RGYIHVVNNDFTSW 313 (491)
Q Consensus 247 -----S~~ITISnn~f~~h~k~mL~G~sds~~~D~g~~VTihhN~F~~n~~q-------R~Pr~R-~G~vHvvNN~y~nw 313 (491)
.-.||+-+|+|.+...-| .. -+.-.+-+.+|+| .+... -.=..+ .+++-+-||||..-
T Consensus 220 ~~d~g~~~vT~hhN~f~~~~~R~-----Pr---~R~G~~Hv~NN~~-~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~ 290 (361)
T 1pe9_A 220 SQDKGKLHVTLFNNVFNRVTERA-----PR---VRYGSIHSFNNVF-KGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIA 290 (361)
T ss_dssp HHHTTCCEEEEESCEEEEEEECS-----SE---ESSCEEEEESCEE-EEETTCSSSCCCCSEEECTTCEEEEESCEEEEE
T ss_pred ccccCcceEEEECeEEcCccccC-----cc---cccceEEEEcceE-ecccCCCccccceEecCCCCcEEEEECCEEECC
Confidence 126999999997543211 00 0112577889999 22111 000112 24788999999864
No 65
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=92.29 E-value=0.5 Score=49.47 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=52.8
Q ss_pred CCceEEee-----cceEEEecceEEEEee-eccEEEEeeEEEeecc------CCCccccCCCCccccCcCCCCCceeeeC
Q 011204 155 SYKTIDGR-----GANVEITGNGCLTLQY-VSHVIIHNVHIHHCKP------SGNTMIASSPTHVGYRGKSDGDGISIFG 222 (491)
Q Consensus 155 SnkTI~G~-----Ga~v~I~Ggg~i~i~~-a~NVIIrnL~Ir~~~~------~g~~~v~~s~~~~g~r~~~dgDaIsI~g 222 (491)
+++||.|. |..-. .+...|.+.. ++++.|+|++|.+..- ..+..+... .=..-+.+|.+.+
T Consensus 141 ~~v~I~G~~~~~~G~s~~-~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N------~I~e~GNgI~L~G 213 (410)
T 2inu_A 141 RDFCLDGVGFTPGKNSYH-NGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDN------MIAECGNCVELTG 213 (410)
T ss_dssp ESCEEECCCCSSSTTSCC-CSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESC------EEESSSEEEEECS
T ss_pred CCEEEECCEeecCCCCcc-cCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECC------EEEecCCceeecc
Confidence 46778777 53211 1222366653 7777888888876310 001111110 0012456677777
Q ss_pred -CceEEEEeeEeecCCCCeeEeeeCCceEEEEccee
Q 011204 223 -SQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYF 257 (491)
Q Consensus 223 -s~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f 257 (491)
++..+|..|.+....||.==-...++...|+.|.+
T Consensus 214 ~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N~i 249 (410)
T 2inu_A 214 AGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNL 249 (410)
T ss_dssp CEESCEEESCEEECCTTSEEEEEESEESCEEESCEE
T ss_pred ccccceEecceeeecCCCCEEEEEeCCCCEEECCCc
Confidence 67777777777777777211235677777777755
No 66
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=91.93 E-value=3.3 Score=43.51 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=76.4
Q ss_pred hHHHHHhc-----CCCeEEEEccCeeEEecceEEec---CCceEEeecce---EEEec------------------c---
Q 011204 124 TLRHAVIQ-----TEPIWITFASNMLIKLKHELIIN---SYKTIDGRGAN---VEITG------------------N--- 171 (491)
Q Consensus 124 sLR~Av~~-----~~Pr~IvF~~sg~I~L~~~L~V~---SnkTI~G~Ga~---v~I~G------------------g--- 171 (491)
|+.+||.+ +..+++|+-..|+- ++.|.|+ +++||.|.|.. |+|.- +
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY--~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~~~~~~d~~~~~n~~G~~~ 168 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEY--QGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYM 168 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEE--ESCEEECCCSSCEEEEECSSSGGGEEEEECCCTTSCHHHHHHHHCGGGSSC
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeE--eeeEEecCCCCcEEEEeccCCCceEEEeecccccccccccccccccccccc
Confidence 67777743 23456666666764 4668884 79999999874 55530 0
Q ss_pred --------------------e-----EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceE
Q 011204 172 --------------------G-----CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKI 226 (491)
Q Consensus 172 --------------------g-----~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nV 226 (491)
+ .+.+ .+++++.+||+|++...... + ......-|+.+ .++++
T Consensus 169 ~G~~aw~tf~~~~~~~sat~gT~~SAT~~V-~g~~F~a~niTf~Ntag~~~----------~-~~~~QAVAL~v-~gDr~ 235 (422)
T 3grh_A 169 PGKPAWYMYDSCQSKRSDSIGVLCSAVFWS-QNNGLQLQNLTIENTLGDSV----------D-AGNHPAVALRT-DGDQV 235 (422)
T ss_dssp TTSTTHHHHHHHHTCCSSSCCGGGCCSEEE-CCTTCEEEEEEEEETTGGGS----------C-SSCCCCCSEEE-CCSSE
T ss_pred cCccccccccccccccccceeccceEEEEE-ECCCEEEEeeEEEeCCCCCC----------C-CCCCceEEEEe-cCCcE
Confidence 0 1223 57999999999998532100 0 00122345555 46899
Q ss_pred EEEeeEeecCCCCeeEee---------eCCceEEEEcceeccC
Q 011204 227 WVDHCSLSYCTDGLIDAI---------MGSTGITISNNYFSHH 260 (491)
Q Consensus 227 WIDHcS~S~~~DGliDv~---------~gS~~ITISnn~f~~h 260 (491)
.+.+|.|....|=|+--. .....--+.+|+|...
T Consensus 236 ~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGt 278 (422)
T 3grh_A 236 QINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGD 278 (422)
T ss_dssp EEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEES
T ss_pred EEEeeEEEeecceeeeccccccccccccccccEEEEecEEecc
Confidence 999999999999876211 1244566777777643
No 67
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=90.19 E-value=0.38 Score=52.07 Aligned_cols=81 Identities=7% Similarity=0.020 Sum_probs=50.7
Q ss_pred cc--EEEEeeEEEeec-cCCCccccCCCCcc-ccCcCCCCCceeeeCCceEEEEeeEeecCCCCe-eEee---eCCceEE
Q 011204 180 SH--VIIHNVHIHHCK-PSGNTMIASSPTHV-GYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGL-IDAI---MGSTGIT 251 (491)
Q Consensus 180 ~N--VIIrnL~Ir~~~-~~g~~~v~~s~~~~-g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGl-iDv~---~gS~~IT 251 (491)
+| |.|+|+++.... +..++..-...... +..-....|+|.|.. +||.|.+|.+.....+. |.+. ....+|+
T Consensus 318 ~ni~V~I~n~~i~~~~~~NTDGidi~~nV~I~n~~i~~gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~ 396 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVL 396 (549)
T ss_dssp GGEEEEEEEEEEECCCBTTCCCCBCCTTCEEEEEEEEESSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEE
T ss_pred CCCeEEEEeeEeEcCCCCCCCcccccCCEEEEeeEEeCCCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEE
Confidence 58 999999986421 11222111100000 000135678999976 99999999998766554 5432 3457999
Q ss_pred EEcceeccCC
Q 011204 252 ISNNYFSHHN 261 (491)
Q Consensus 252 ISnn~f~~h~ 261 (491)
|+||.+.++.
T Consensus 397 v~n~~i~~s~ 406 (549)
T 1x0c_A 397 FDNVDVIHQA 406 (549)
T ss_dssp EEEEEEEECC
T ss_pred EEeeEEECcc
Confidence 9999998764
No 68
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=82.08 E-value=48 Score=37.28 Aligned_cols=40 Identities=15% Similarity=0.242 Sum_probs=30.0
Q ss_pred hHHHHHhcC------------CCeEEEEccCeeEEecceEEecCCceEEeecc
Q 011204 124 TLRHAVIQT------------EPIWITFASNMLIKLKHELIINSYKTIDGRGA 164 (491)
Q Consensus 124 sLR~Av~~~------------~Pr~IvF~~sg~I~L~~~L~V~SnkTI~G~Ga 164 (491)
.+.+|+.+- .|.+|+|. .|+-.++..|.+.+++.|.|.+.
T Consensus 68 Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P-~GtYlvs~tI~l~~~t~L~G~~~ 119 (758)
T 3eqn_A 68 AIQAAINAGGRCGQGCDSTTTQPALVYFP-PGTYKVSSPLVVLYQTQLIGDAK 119 (758)
T ss_dssp HHHHHHHTTSCSCTTCCCCSSSCEEEEEC-SSEEEESSCEECCTTEEEEECSS
T ss_pred HHHHHHHHhhhcccccccccccceEEEEC-CceEEEcccEEccCCeEEEecCC
Confidence 577787532 24677775 56877788899999999999865
No 69
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=81.72 E-value=5.6 Score=43.52 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=34.0
Q ss_pred ceee---eCCceEEEEeeE----eec--CCCCeeEeeeCCceEEEEcceeccCCceeee-ccC
Q 011204 217 GISI---FGSQKIWVDHCS----LSY--CTDGLIDAIMGSTGITISNNYFSHHNEVMLL-GHN 269 (491)
Q Consensus 217 aIsI---~gs~nVWIDHcS----~S~--~~DGliDv~~gS~~ITISnn~f~~h~k~mL~-G~s 269 (491)
.|.+ ..|+||.|++|+ +.. -.||. |+|+||.|...+.+.-+ .+.
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI---------V~I~nc~I~tGDDCIAI~KSG 253 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS---------TVYVNCPYSGVESCYFSMSSS 253 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE---------EEEECSSSEEEESCEEECCCT
T ss_pred EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE---------EEEEeeEEecCCcEEEEecCC
Confidence 4666 789999999999 443 35665 99999999988877766 443
No 70
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=73.08 E-value=18 Score=34.23 Aligned_cols=50 Identities=10% Similarity=0.073 Sum_probs=33.0
Q ss_pred CCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEEcceeccCCc
Q 011204 212 KSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNE 262 (491)
Q Consensus 212 ~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~h~k 262 (491)
.-..||+++.++..+.|.-+.+....|-.+- ..+...++|+|-+..+.-|
T Consensus 84 dVcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q-~Ng~Gtv~I~nF~~~~~GK 133 (196)
T 3t9g_A 84 DVGEDALTVKSEGVVEVIGGSAKEAADKVFQ-LNAPCTFKVKNFTATNIGK 133 (196)
T ss_dssp SCCSCSEEECSSEEEEEESCEEEEEEEEEEE-ECSSEEEEEEEEEEEEEEE
T ss_pred eeeceeeEEcCCCeEEEECCCccCCCceEEE-ECCCceEEEeeEEEccCCE
Confidence 3456777777777777777777777777664 3455667777666655433
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=51.90 E-value=53 Score=35.07 Aligned_cols=110 Identities=16% Similarity=0.142 Sum_probs=55.4
Q ss_pred Cceeee-CCceEEEEeeEeecCCCCeeEeee-----------CCceEEEEcceeccCCceeeeccCCcccCCCC-eE-EE
Q 011204 216 DGISIF-GSQKIWVDHCSLSYCTDGLIDAIM-----------GSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQ-VT 281 (491)
Q Consensus 216 DaIsI~-gs~nVWIDHcS~S~~~DGliDv~~-----------gS~~ITISnn~f~~h~k~mL~G~sds~~~D~g-~~-VT 281 (491)
++|.+. .++||.|..|.|+-+.| +|+++. .|.+|+ | .+..+|+.... .| .+ |+
T Consensus 210 ~gL~f~eSCrNV~IsnC~FsVGDd-ciaiksGk~~~~~~~~~~se~~~--------h-gav~igSE~m~---~Gvk~~v~ 276 (514)
T 2vbk_A 210 VGLHFLGQCVSVSVSSCHFSRGNY-SADESFGIRIQPQTYAWSSEAVR--------S-EAIILDSETMC---IGFKNAVY 276 (514)
T ss_dssp EEEEEESCCEEEEEESCEEECTTS-CCTTCEEEEEECBCCTTTSSCBC--------C-EEEEEESSEEE---ESCSEEEE
T ss_pred cCccccCCCCeEEEeccEEecCcc-eeeeecCceecccccCCcchhcc--------c-ccEEECchhhc---ccccccEE
Confidence 466655 69999999999987655 223321 234444 2 34455654111 12 46 89
Q ss_pred EEeeEecCCCcccCccccCCeEEEEcceEeCC--cceEeecCCCceEEEeCcEEeCCCCC
Q 011204 282 IAFNHFGVALVQRMPRCRRGYIHVVNNDFTSW--EMYAIGGSANPTINSQGNRYTAPPDD 339 (491)
Q Consensus 282 ihhN~F~~n~~qR~Pr~R~G~vHvvNN~y~nw--~~yaiggs~~~~I~segNyF~~~~~~ 339 (491)
++.|+| .++.|---..-...--++-|+--.+ ...=|...+..+--+.|=||..|..+
T Consensus 277 v~~Clf-~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (514)
T 2vbk_A 277 VHDCLD-LHMEQLDLDYCGSTGVVIENVNGGFSFSNSWIAADADGTEQFTGIYFRTPTST 335 (514)
T ss_dssp ESCCEE-EEEESEEEEEESSEEEEESCCEEEEEEEEEEEEECTTCCSCCEEEEECCCSSC
T ss_pred EEeeec-cCCccccccccCCcceEEEeccCceeeccceEEecCCCcceeEEEEEeCCCcc
Confidence 999999 4555532221112333444542211 11112222333333455578776544
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=50.53 E-value=36 Score=32.21 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=43.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITIS 253 (491)
|...+.-.|+|+|+...+.-. -|| +-+.. .-.++|.||+++++.....++-.-...-.++++
T Consensus 113 ~Q~Ng~Gtv~I~nF~~~~~GK-------------l~R--SCGnc---~~~r~v~i~~v~~~n~k~~l~rtdS~~~~~~~~ 174 (196)
T 3t9g_A 113 FQLNAPCTFKVKNFTATNIGK-------------LVR--QNGNT---TFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYH 174 (196)
T ss_dssp EEECSSEEEEEEEEEEEEEEE-------------EEE--ECTTC---CSCEEEEEEEEEEEEEEEEEEECCCTTCEEEEE
T ss_pred EEECCCceEEEeeEEEccCCE-------------EEE--cCCCC---CceeEEEEeCeEEeCCEEEEEEcCCCCCEEEEe
Confidence 445566678888888876311 122 22222 234899999999999888887543344567777
Q ss_pred cceecc
Q 011204 254 NNYFSH 259 (491)
Q Consensus 254 nn~f~~ 259 (491)
|...++
T Consensus 175 n~~~~~ 180 (196)
T 3t9g_A 175 NLNVNN 180 (196)
T ss_dssp EEEEEE
T ss_pred cceecC
Confidence 776654
No 73
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=46.03 E-value=92 Score=29.44 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=32.1
Q ss_pred CCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEEcceecc
Q 011204 212 KSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSH 259 (491)
Q Consensus 212 ~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITISnn~f~~ 259 (491)
.-..||+++.++..++|.-..+....|-.+- ..+.-.++|++-+..+
T Consensus 80 dVcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q-~Ng~Gtv~I~nF~~~~ 126 (197)
T 1ee6_A 80 DVGEDALTLKSSGTVNISGGAAYKAYDKVFQ-INAAGTINIRNFRADD 126 (197)
T ss_dssp SCCSCSEEEEESEEEEEESCEEEEEEEEEEE-ECSSEEEEEESCEEEE
T ss_pred eccccccEEcCCCeEEEECCCccCCCccEEE-ecCCceEEEeeEEEcc
Confidence 3456788887777778888877777777764 3455667777755443
No 74
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=35.62 E-value=32 Score=24.13 Aligned_cols=22 Identities=41% Similarity=0.605 Sum_probs=18.0
Q ss_pred CCCCCCchHHHHHHHHHHhhhh
Q 011204 455 LPPPSPSTSIFLSLLIILILYT 476 (491)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~l~~ 476 (491)
.+-.+--||++|.||+|+||-.
T Consensus 8 q~VELNRTSLy~GLLlifvlav 29 (37)
T 3arc_L 8 QPVELNRTSLYLGLLLILVLAL 29 (37)
T ss_dssp CCBCCCHHHHHHHHHHHHHHHH
T ss_pred CcceechhhHHHHHHHHHHHHH
Confidence 4556777999999999999865
No 75
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=33.73 E-value=1.8e+02 Score=28.98 Aligned_cols=58 Identities=12% Similarity=0.211 Sum_probs=42.0
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITIS 253 (491)
|++ .+++++++|.+|..- -|.+...+.++ .+.+|.+.-.. |.+-|.-..-++
T Consensus 113 l~v-~~d~~~f~~c~f~g~----------------------QDTLy~~~~r~-~~~~c~I~G~v----DFIfG~~~avf~ 164 (317)
T 1xg2_A 113 LRV-GADMSVINRCRIDAY----------------------QDTLYAHSQRQ-FYRDSYVTGTV----DFIFGNAAVVFQ 164 (317)
T ss_dssp EEE-CCTTEEEESCEEECS----------------------TTCEEECSSEE-EEESCEEEESS----SCEEECCEEEEE
T ss_pred EEE-eCCcEEEEEeEeCcc----------------------ccceeecCccE-EEEeeEEEece----eEEcCCceEEEe
Confidence 666 588999999999852 36666666555 88888887444 455566678889
Q ss_pred cceecc
Q 011204 254 NNYFSH 259 (491)
Q Consensus 254 nn~f~~ 259 (491)
+|.|..
T Consensus 165 ~c~i~~ 170 (317)
T 1xg2_A 165 KCQLVA 170 (317)
T ss_dssp SCEEEE
T ss_pred eeEEEE
Confidence 998874
No 76
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=28.16 E-value=90 Score=31.22 Aligned_cols=58 Identities=12% Similarity=0.216 Sum_probs=42.4
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEEeeEeecCCCCeeEeeeCCceEEEE
Q 011204 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (491)
Q Consensus 174 i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWIDHcS~S~~~DGliDv~~gS~~ITIS 253 (491)
|++ .++++.++|.+|.. .-|.+...+.++ .+.+|.+....| .+-|.-..-++
T Consensus 117 l~v-~~d~~~f~~c~f~g----------------------~QDTLy~~~~r~-~~~~c~I~G~vD----FIfG~~~a~f~ 168 (319)
T 1gq8_A 117 LRV-GSDLSAFYRCDILA----------------------YQDSLYVHSNRQ-FFINCFIAGTVD----FIFGNAAVVLQ 168 (319)
T ss_dssp EEE-CCTTEEEEEEEEEC----------------------STTCEEECSSEE-EEESCEEEESSS----CEEESCEEEEE
T ss_pred EEe-cCCcEEEEEeEECc----------------------cceeeeecCccE-EEEecEEEeeee----EEecCCcEEEE
Confidence 666 58899999999875 236677766554 889998885544 44566678899
Q ss_pred cceecc
Q 011204 254 NNYFSH 259 (491)
Q Consensus 254 nn~f~~ 259 (491)
+|.|..
T Consensus 169 ~c~i~~ 174 (319)
T 1gq8_A 169 DCDIHA 174 (319)
T ss_dssp SCEEEE
T ss_pred eeEEEE
Confidence 999874
No 77
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=27.98 E-value=1.6e+02 Score=27.90 Aligned_cols=85 Identities=19% Similarity=0.333 Sum_probs=49.9
Q ss_pred ceEEeecceEEEecce-------EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCcCCCCCceeeeCCceEEEE
Q 011204 157 KTIDGRGANVEITGNG-------CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVD 229 (491)
Q Consensus 157 kTI~G~Ga~v~I~Ggg-------~i~i~~a~NVIIrnL~Ir~~~~~g~~~v~~s~~~~g~r~~~dgDaIsI~gs~nVWID 229 (491)
.||.|.+ ..+|.|++ .|...+.-.|+|+|+...+.-. . || +-+.. + ..++|-|+
T Consensus 86 ~T~k~~g-~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~nF~~~~~GK----l---------~R--ScGnc-~--~~r~v~i~ 146 (197)
T 1ee6_A 86 LTLKSSG-TVNISGGAAYKAYDKVFQINAAGTINIRNFRADDIGK----L---------VR--QNGGT-T--YKVVMNVE 146 (197)
T ss_dssp EEEEESE-EEEEESCEEEEEEEEEEEECSSEEEEEESCEEEEEEE----E---------EE--ECTTC-C--SCEEEEEE
T ss_pred cEEcCCC-eEEEECCCccCCCccEEEecCCceEEEeeEEEccCCE----E---------EE--cCCCC-c--cceEEEEe
Confidence 4555432 35555554 2444455678888877765310 1 22 23332 1 24799999
Q ss_pred eeEeecCCCCeeEeeeCCceEEEEcceeccC
Q 011204 230 HCSLSYCTDGLIDAIMGSTGITISNNYFSHH 260 (491)
Q Consensus 230 HcS~S~~~DGliDv~~gS~~ITISnn~f~~h 260 (491)
++.++.....++-....-+.+||+|....+.
T Consensus 147 ~v~~~~~k~~i~~~ds~gdtati~n~~~~~v 177 (197)
T 1ee6_A 147 NCNISRVKDAILRTDSSTSTGRIVNTRYSNV 177 (197)
T ss_dssp SCEEEEEEEEEEECCCTTCEEEEESCEEESC
T ss_pred ceEEECceEEEEEecCCCCEEEEEecccCCc
Confidence 9999887766654333447888888666553
No 78
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=27.30 E-value=1.1e+02 Score=34.30 Aligned_cols=68 Identities=12% Similarity=0.058 Sum_probs=47.7
Q ss_pred hhHHHHHhc-CCCeEEEEccCeeEEecceEEecCCceEEeecceEEEecc----------eEEEE---eeeccEEEEeeE
Q 011204 123 GTLRHAVIQ-TEPIWITFASNMLIKLKHELIINSYKTIDGRGANVEITGN----------GCLTL---QYVSHVIIHNVH 188 (491)
Q Consensus 123 GsLR~Av~~-~~Pr~IvF~~sg~I~L~~~L~V~SnkTI~G~Ga~v~I~Gg----------g~i~i---~~a~NVIIrnL~ 188 (491)
..|.+|+.+ .+-++|.|. .|+-.+++.|.|++++.|.|++-++-+..+ ..+++ -.+-.|+|.+|.
T Consensus 418 ~Ai~~al~aa~~g~~v~~P-~G~Y~vt~Ti~ip~~~~ivG~~~~~I~~~G~~F~d~~~P~pvv~VG~~gd~G~veisdl~ 496 (758)
T 3eqn_A 418 QAIKNVFAKYAGCKIIFFD-AGTYIVTDTIQIPAGTQIVGEVWSVIMGTGSKFTDYNNPQPVIQVGAPGSSGVVEITDMI 496 (758)
T ss_dssp HHHHHHHHHHTTTSEEECC-SEEEEESSCEEECTTCEEECCSSEEEEECSGGGCCTTSCEEEEEESCTTCBSCEEEESCE
T ss_pred HHHHHHHHHhcCCCEEEEC-CCEeEECCeEEcCCCCEEEecccceEecCCccccCCCCCeeeEEeCCCCCCCeEEEEeEE
Confidence 457777653 334666665 578888999999999999999876333322 13555 245689999999
Q ss_pred EEe
Q 011204 189 IHH 191 (491)
Q Consensus 189 Ir~ 191 (491)
|.-
T Consensus 497 ~~t 499 (758)
T 3eqn_A 497 FTT 499 (758)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
Done!