Query 011205
Match_columns 491
No_of_seqs 186 out of 1067
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 03:20:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3thd_A Beta-galactosidase; TIM 100.0 2E-118 5E-123 970.1 36.6 455 1-484 159-626 (654)
2 4e8d_A Glycosyl hydrolase, fam 100.0 2E-117 6E-122 954.8 39.3 429 1-481 150-589 (595)
3 3d3a_A Beta-galactosidase; pro 100.0 1E-105 4E-110 875.5 40.5 429 1-482 156-592 (612)
4 3og2_A Beta-galactosidase; TIM 100.0 1E-61 3.6E-66 542.7 30.9 170 1-185 174-368 (1003)
5 1tg7_A Beta-galactosidase; TIM 100.0 2.5E-60 8.7E-65 538.9 33.1 224 240-481 687-951 (971)
6 1kwg_A Beta-galactosidase; TIM 97.4 0.00051 1.7E-08 75.6 10.4 146 16-186 220-388 (645)
7 3fn9_A Putative beta-galactosi 95.9 0.032 1.1E-06 61.8 11.1 94 238-340 56-159 (692)
8 3lpf_A Beta-glucuronidase; alp 95.7 0.042 1.4E-06 59.9 11.0 102 239-349 64-192 (605)
9 3hn3_A Beta-G1, beta-glucuroni 95.7 0.033 1.1E-06 60.7 10.0 70 239-317 74-155 (613)
10 3fn9_A Putative beta-galactosi 95.6 0.02 6.8E-07 63.5 8.1 68 391-460 59-128 (692)
11 3lpf_A Beta-glucuronidase; alp 95.5 0.034 1.2E-06 60.6 9.1 67 391-459 66-134 (605)
12 3gm8_A Glycoside hydrolase fam 95.4 0.044 1.5E-06 61.7 10.1 95 241-346 65-167 (801)
13 3cmg_A Putative beta-galactosi 95.2 0.081 2.8E-06 58.2 11.2 92 240-340 47-147 (667)
14 3cmg_A Putative beta-galactosi 94.9 0.048 1.6E-06 60.1 8.1 68 391-460 48-117 (667)
15 3gm8_A Glycoside hydrolase fam 94.5 0.054 1.8E-06 61.0 7.5 68 391-460 65-133 (801)
16 3u7v_A Beta-galactosidase; str 94.0 0.0078 2.7E-07 64.5 -0.6 27 1-27 200-226 (552)
17 3bga_A Beta-galactosidase; NYS 93.9 0.078 2.7E-06 61.2 7.3 68 391-460 125-193 (1010)
18 1yq2_A Beta-galactosidase; gly 93.7 0.099 3.4E-06 60.4 7.6 69 391-461 117-189 (1024)
19 3bga_A Beta-galactosidase; NYS 93.5 0.2 6.8E-06 57.8 9.8 97 241-349 125-234 (1010)
20 2je8_A Beta-mannosidase; glyco 93.3 0.087 3E-06 59.7 6.3 66 393-460 65-132 (848)
21 3oba_A Beta-galactosidase; TIM 93.1 0.075 2.6E-06 61.4 5.5 68 391-460 111-180 (1032)
22 3hn3_A Beta-G1, beta-glucuroni 92.9 0.1 3.5E-06 56.8 6.0 68 391-460 76-151 (613)
23 1vem_A Beta-amylase; beta-alph 92.8 0.0072 2.5E-07 64.7 -3.3 106 2-139 178-296 (516)
24 1jz7_A Lactase, beta-galactosi 92.8 0.11 3.6E-06 60.2 6.1 68 391-460 118-187 (1023)
25 1tg7_A Beta-galactosidase; TIM 92.6 0.24 8.3E-06 56.7 8.6 168 1-181 154-346 (971)
26 2vzs_A CSXA, EXO-beta-D-glucos 92.1 0.16 5.4E-06 58.8 6.4 91 241-340 118-223 (1032)
27 1jz7_A Lactase, beta-galactosi 91.2 0.46 1.6E-05 54.9 8.8 89 241-341 118-217 (1023)
28 3oba_A Beta-galactosidase; TIM 91.1 0.32 1.1E-05 56.2 7.4 97 241-349 111-222 (1032)
29 2vzs_A CSXA, EXO-beta-D-glucos 90.8 0.4 1.4E-05 55.4 7.9 67 391-460 118-187 (1032)
30 1yq2_A Beta-galactosidase; gly 90.4 0.44 1.5E-05 55.1 7.7 89 241-341 117-218 (1024)
31 3og2_A Beta-galactosidase; TIM 88.9 0.96 3.3E-05 51.6 8.8 64 392-460 711-781 (1003)
32 2je8_A Beta-mannosidase; glyco 88.7 0.62 2.1E-05 52.7 7.2 65 243-316 65-135 (848)
33 3tty_A Beta-GAL, beta-galactos 86.3 3 0.0001 45.9 10.7 144 16-184 231-382 (675)
34 2okx_A Rhamnosidase B; alpha b 77.2 3.5 0.00012 47.1 7.2 66 391-459 21-92 (956)
35 3cih_A Putative alpha-rhamnosi 63.5 9.1 0.00031 42.3 6.4 55 391-461 56-110 (739)
36 1xyz_A 1,4-beta-D-xylan-xylano 63.4 4.7 0.00016 40.5 3.7 161 2-185 150-347 (347)
37 3civ_A Endo-beta-1,4-mannanase 59.5 14 0.00048 37.0 6.4 115 1-121 168-291 (343)
38 2okx_A Rhamnosidase B; alpha b 58.4 67 0.0023 36.5 12.5 102 241-353 21-136 (956)
39 3d3a_A Beta-galactosidase; pro 53.0 34 0.0012 37.0 8.5 65 391-463 382-447 (612)
40 1i1w_A Endo-1,4-beta-xylanase; 52.0 54 0.0019 31.9 9.2 147 2-183 126-302 (303)
41 1v0l_A Endo-1,4-beta-xylanase 50.1 41 0.0014 33.0 8.0 149 2-185 123-303 (313)
42 1bqc_A Protein (beta-mannanase 48.2 21 0.00073 34.3 5.5 36 1-37 122-162 (302)
43 3cui_A EXO-beta-1,4-glucanase; 47.9 12 0.00043 36.7 3.8 162 1-183 121-313 (315)
44 1ta3_B Endo-1,4-beta-xylanase; 40.9 1.1E+02 0.0037 29.8 9.3 149 2-182 125-302 (303)
45 1nq6_A XYS1; glycoside hydrola 34.0 56 0.0019 31.6 6.0 151 2-181 122-301 (302)
46 3pzt_A Endoglucanase; alpha/be 32.6 1E+02 0.0036 30.0 7.8 122 2-130 159-288 (327)
47 3e5a_B Targeting protein for X 28.3 18 0.00062 24.8 0.9 10 154-163 5-14 (44)
48 2d1z_A Endo-1,4-beta-D-xylanas 27.9 2.2E+02 0.0076 28.8 9.6 138 15-184 148-302 (436)
49 4hty_A Cellulase; (alpha/beta) 25.2 2.4E+02 0.0082 27.6 9.0 128 2-131 184-327 (359)
50 4aw7_A GH86A beta-porphyranase 22.3 47 0.0016 35.7 3.1 37 421-459 521-569 (591)
51 1w32_A Endo-1,4-beta-xylanase 21.8 1.1E+02 0.0038 30.4 5.7 151 14-183 157-346 (348)
52 3tty_A Beta-GAL, beta-galactos 20.9 31 0.001 37.8 1.4 25 1-25 144-172 (675)
53 2dep_A Xylanase B, thermostabl 20.5 1.8E+02 0.0061 28.9 6.9 166 2-184 141-346 (356)
No 1
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=100.00 E-value=1.6e-118 Score=970.09 Aligned_cols=455 Identities=37% Similarity=0.642 Sum_probs=383.2
Q ss_pred CccccccCCCCC-CCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCCCeeeeecCCCCCCCCchhHHhHHHhc
Q 011205 1 MVQIENEFGSYG-DDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFN 79 (491)
Q Consensus 1 mvQvENEYg~y~-~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~~~v~~~~~f~~~~~~~~~f~~~~~~~ 79 (491)
|+|||||||+|+ ||++||+||++++|++.|++|||||||++....+.||++++ +++++||+++.++...|+.+++++
T Consensus 159 ~~QvENEyG~y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~~~~~~~~g~~~g--~~~t~~f~~~~~~~~~~~~~~~~~ 236 (654)
T 3thd_A 159 TVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQG--LYTTVDFGTGSNITDAFLSQRKCE 236 (654)
T ss_dssp EEECSSCGGGSSCCCHHHHHHHHHHHHHHHCSSSEEEEEEESSHHHHHHHCBTT--BEEEEECCTTSCHHHHHHHHHHHC
T ss_pred EEEecccccccccccHHHHHHHHHHHHHhcCCceeeEeecCCccccccCCCcCC--cceecccCCCccHHHHHHHHHHhC
Confidence 689999999997 79999999999999966999999999998766789999988 999999986655667788888883
Q ss_pred CCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeecccCCCCcCCCCCCCCCCCCCCcccccC
Q 011205 80 APGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYD 159 (491)
Q Consensus 80 ~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYD 159 (491)
|++|+||+|||+||||+||++++.+++++++..+++|+++|+|+|||||||||||||||||+. .|+|++||||
T Consensus 237 --p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~N~YM~hGGTNfG~~~Ga~~-----~~~~~~TSYD 309 (654)
T 3thd_A 237 --PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANS-----PYAAQPTSYD 309 (654)
T ss_dssp --SSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCEEEEECSBCCBCCTTCBCEET-----TTEECCSBCC
T ss_pred --CCCCeEEeccccccCCcCCCCCCCCCHHHHHHHHHHHHhcCCceEEEecccccccccccCCCC-----CCCCccccCc
Confidence 478999999999999999999999999999999999999999999999999999999999983 3889999999
Q ss_pred CCCccCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCcccccceeeeceeeccccccccCCCCccccCCCccccccCC
Q 011205 160 YDAPIKESGDVDNPKFKAIRRVVEKFSPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESVGQ 239 (491)
Q Consensus 160 Y~Api~E~G~~t~pKy~~lr~~i~~~~~~~l~~~p~~~~~~~y~~v~~~~~~~L~~~l~~~~~~~~~~s~~p~~~E~lgq 239 (491)
|||||+|+|++| |||.++|++|++|...+++++|++.++++|++|+++..++||+.++.+++.++++++.|++||+|+|
T Consensus 310 YdApi~E~G~~t-~Ky~~lr~li~~~~~~~~~~~P~~~p~~~~~~v~l~~~~~L~~~l~~l~~~~~~~s~~P~tmE~l~Q 388 (654)
T 3thd_A 310 YDAPLSEAGDLT-EKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQ 388 (654)
T ss_dssp TTCSBCTTCCBC-HHHHHHHHHHTTTSCCCCSCCCCCCCBCCCEEEECEEEEETTTTHHHHCTTCCEEESSCCBTGGGTC
T ss_pred CCCccccccCcc-HHHHHHHHHHHHhcCCCCCCCCCCCcccccCcEeecccccHHHHHHhhCcCCCcccCCCCCHHHhCC
Confidence 999999999999 5999999999999988888888889999999999999999999998887555789999999999999
Q ss_pred ccceEEEEEeeCCC-CCCceeE--ecCcCcEEEEEEcCCCCCCCCCCeEEEEEEccccceeEecccccCCCcEEEEEEEe
Q 011205 240 MFGFLLYVSEFGGK-DYGSSLL--ISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSNRALSLPNFRCGSNISLFVLVEN 316 (491)
Q Consensus 240 ~~GyvlYrt~~~~~-~~~~~L~--i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~~~~~~lp~~~~~~~~~L~ILvEn 316 (491)
++|||||||++... ..+..|+ +.++||||+|||| |+++|+++|....++.++. +..++|+|||||
T Consensus 389 ~~GyvlY~t~i~~~~~~~~~l~l~~~~v~Dra~Vfvd---------g~~~G~l~r~~~~~l~~~~---~~~~~L~ILVEN 456 (654)
T 3thd_A 389 HYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVD---------GIPQGVLERNNVITLNITG---KAGATLDLLVEN 456 (654)
T ss_dssp CSSEEEEEEECSSCEEEEEEEECTTCCEESEEEEEET---------TEEEEEEETTTBCEEEEEE---CTTCEEEEEEEC
T ss_pred CcCeEEEEeecCCCCCCCcceeeccCCcceEEEEEEC---------CEEEEEEecccceeEeccC---CCCCEEEEEEEc
Confidence 99999999999753 1333455 5789999999999 9999999985433344432 235799999999
Q ss_pred CCccccCcCccCCccceeeEEECCEEecCeEEEeecCCCCCCCCCcccccccccccchhhhhhhhccccCCCCCCCceEE
Q 011205 317 MGRVNYGPYMFDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKEPAFY 396 (491)
Q Consensus 317 ~Gr~NyG~~~~~~KGI~g~V~l~g~~l~~W~~~~l~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~p~~y 396 (491)
|||||||+.+.|+|||+|+|+|+++.|++|+|++|+++...... +.............. | ........+|+||
T Consensus 457 ~GRvNyG~~i~d~KGi~g~V~l~~~~l~~W~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~fy 529 (654)
T 3thd_A 457 MGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVRSH-LGGWGHRDSGHHDEA-----W-AHNSSNYTLPAFY 529 (654)
T ss_dssp CCCBCSSGGGCCCCEECSCCEETTEECCCEEEEECCHHHHHHTT-TTTTCCC--------------------CCCCCEEE
T ss_pred CCccccCCCCCCCCCCCCceEECCEEcCCcEEEeeccchhhhhh-hcccccccccccccc-----c-cccccCCCCCEEE
Confidence 99999999999999999999999999999999999886421100 000000000000000 0 0112234579999
Q ss_pred EEEEeeCCC--CCccceEEEeCCCceEEEEECCeeceeccCCCCCeeeEecCCcccccc-CcEEEEEEecCCCCc-----
Q 011205 397 VGRFSIDKV--NQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHG-ENLVVIFELESPNSE----- 468 (491)
Q Consensus 397 ~~~f~i~~~--~~~~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G-~N~ivvfE~~~~~~~----- 468 (491)
+++|+|+.. +.+.||||||+||+||+||||||||||||+++|||+|||||++|||+| +|+|||||+++..+.
T Consensus 530 ~g~f~i~~~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~~GPQ~TLYvP~p~Lk~G~~NeIiVfEle~~~~~~~~~~ 609 (654)
T 3thd_A 530 MGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPE 609 (654)
T ss_dssp EEEECCCSSCTTCSCBEEEECTTCCSEEEEETTEEEEEECTTTCSCCCEEECGGGCCSSSCEEEEEEESSCCSCSSSCGG
T ss_pred EEEEEccCCCCCCCCCEEEeCCCCCeEEEEECCcccccccCCCCCeEEEEecHHHhCCCCCceEEEEEeecCCccccccc
Confidence 999999752 125799999999999999999999999998899999999999999997 999999999975544
Q ss_pred -ceEEEeeccccccccc
Q 011205 469 -LVIHSVNQPDFTCGSI 484 (491)
Q Consensus 469 -~~~~~~~~~~~~~~~~ 484 (491)
+.|+|+++|+++.+.-
T Consensus 610 ~~~i~~~~~P~l~~~~~ 626 (654)
T 3thd_A 610 LCAVTFVDRPVIGSSVT 626 (654)
T ss_dssp GSEEEEESSCCCSCC--
T ss_pred cceEEeecccccCCCCC
Confidence 6899999999988654
No 2
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=100.00 E-value=1.7e-117 Score=954.85 Aligned_cols=429 Identities=37% Similarity=0.624 Sum_probs=375.5
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCc--CCCeeeeecCCCCCCCCchhHHhHHHh
Q 011205 1 MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTI--RGDAVFAAVDFSTGAEPWPIFKLQKQF 78 (491)
Q Consensus 1 mvQvENEYg~y~~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~--~~~~v~~~~~f~~~~~~~~~f~~~~~~ 78 (491)
|+|||||||+|++|++||+||++++|+ .|++|||||||++....+.+|++ ++ ++.|+||+. .+...|..++.|
T Consensus 150 ~~QvENEyG~~~~~~~Y~~~l~~~~~~-~Gi~vpl~t~d~~~~~~~~~G~~~~~~--~~~t~nfg~--~~~~~~~~~~~~ 224 (595)
T 4e8d_A 150 MMQVENEYGSYGEDKAYLRAIRQLMEE-CGVTCPLFTSDGPWRATLKAGTLIEED--LFVTGNFGS--KAPYNFSQMQEF 224 (595)
T ss_dssp EEESSSSGGGTCCCHHHHHHHHHHHHH-TTCCSCEEEEECSSHHHHHHHCCGGGT--CEEEEEESS--CHHHHHHHHHHH
T ss_pred EEEccccccccCCcHHHHHHHHHHHHH-cCCcEEEEEccCcchhcccCCccCCCC--eEEEeeCCC--chhHhHHHHHHh
Confidence 789999999999999999999999999 79999999999977667888997 66 899999863 234567766776
Q ss_pred cC-CCCC-CCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeecccCCCCcCCCCCCCCCCCCC-Ccc
Q 011205 79 NA-PGKS-PPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQ-PDL 155 (491)
Q Consensus 79 ~~-~~~~-P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hGGTNfG~~~Ga~~~~~~~~~~-p~~ 155 (491)
++ .+++ |+||+|||+||||+||++++.+|+++++..++++|++| |+|||||||||||||||||+.. +.|. |++
T Consensus 225 ~~~~p~~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s~N~YM~hGGTNfG~~~Ga~~~---~~~~~p~~ 300 (595)
T 4e8d_A 225 FDEHGKKWPLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-SINLYMFHGGTNFGFMNGCSAR---GTLDLPQV 300 (595)
T ss_dssp HHHTTCCCCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-EEEEEEEECCBCCTTCBCEEEE---TTEEEEBC
T ss_pred hhcCCCCCCeEEEeeccccccccCCCCCCCCHHHHHHHHHHHHHcC-CceEEecccccCcccccCCCCC---CCCCCCCC
Confidence 31 2466 99999999999999999999999999999999999999 9999999999999999999742 2474 999
Q ss_pred cccCCCCccCCCCCCChHHHHHHHHHHHhh-CCCCCCCCCCCCCcccccceeeeceeeccccccccCCCCccccCCCccc
Q 011205 156 TSYDYDAPIKESGDVDNPKFKAIRRVVEKF-SPASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSM 234 (491)
Q Consensus 156 TSYDY~Api~E~G~~t~pKy~~lr~~i~~~-~~~~l~~~p~~~~~~~y~~v~~~~~~~L~~~l~~~~~~~~~~s~~p~~~ 234 (491)
|||||||||+|+|++| |||.++|++|++| .+.++++ |+..++++|++|+++..++||++++.++ ++++|+.|++|
T Consensus 301 TSYDYdApi~E~G~~t-~Ky~~lr~~i~~~~~~~p~~~-P~~~~~~~~~~v~l~~~~~L~~~l~~l~--~~~~s~~P~~m 376 (595)
T 4e8d_A 301 TSYDYDALLDEEGNPT-AKYLAVKKMMATHFSEYPQLE-PLYKESMELDAIPLVEKVSLFETLDSLS--SPVESLYPQKM 376 (595)
T ss_dssp SBCCTTCSBCTTSCBC-HHHHHHHHHHHHHCTTSCCCC-CCCCCBCCEEEEEEEEEEEHHHHHHHHC--CCEEESSCCBT
T ss_pred CccCCCCccCcCCCcc-HHHHHHHHHHHHhCCCCCCCC-CCCCcccccceEEecccccHHHhhhhcC--CccccCCCCCH
Confidence 9999999999999999 5999999999999 5777777 8889999999999999999999998775 46889999999
Q ss_pred cccCCccceEEEEEeeCCCCCCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcccc-ceeEecccccCCC-cEEEE
Q 011205 235 ESVGQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSN-RALSLPNFRCGSN-ISLFV 312 (491)
Q Consensus 235 E~lgq~~GyvlYrt~~~~~~~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~~-~~~~lp~~~~~~~-~~L~I 312 (491)
|+|+|++|||||||++.....+..|++.++||||+|||| |+++|+++|... .++.++.. .+. ++|+|
T Consensus 377 E~lgq~~GyvlY~t~i~~~~~~~~L~~~~~~Dra~Vfvd---------g~~~g~l~r~~~~~~i~~~~~--~~~~~~L~I 445 (595)
T 4e8d_A 377 EELGQSYGYLLYRTETNWDAEEERLRIIDGRDRAQLYVD---------GQWVKTQYQTEIGEDIFYQGK--KKGLSRLDI 445 (595)
T ss_dssp GGGTCCSSEEEEEEEEECSSSSEEEEEEEEESEEEEEET---------TEEEEEEEGGGTTSCEEECCC--SSSEEEEEE
T ss_pred HHcCCCcCeEEEEeccCCCCCCceeecCCCceEEEEEEC---------CEEEEEEEcccCcceEEeecC--CCCCCEEEE
Confidence 999999999999999976556678999999999999999 999999998653 45666432 245 79999
Q ss_pred EEEeCCccccCcCc---cCCccceeeEEECCEEecCeEEEeecCCCCCCCCCcccccccccccchhhhhhhhccccCCCC
Q 011205 313 LVENMGRVNYGPYM---FDEKGILSSVYLGGKVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNI 389 (491)
Q Consensus 313 LvEn~Gr~NyG~~~---~~~KGI~g~V~l~g~~l~~W~~~~l~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 389 (491)
|||||||||||+.+ .++|||+|+|+|+++.|++|+|++|+|+....+ .|. ....
T Consensus 446 LVEN~GRvNyG~~~~~~~~~KGi~g~V~l~~~~l~~W~~~~L~l~~~~~~------------~~~-----------~~~~ 502 (595)
T 4e8d_A 446 LIENMGRVNYGHKFLADTQRKGIRTGVCKDLHFLLNWKHYPLPLDNPEKI------------DFS-----------KGWT 502 (595)
T ss_dssp EEECCCCCCSGGGTTCGGGSCEEEEEEEETTEECCCEEEEEECCCCGGGC------------CTT-----------SCCC
T ss_pred EEEcCCCcccCcccCcCCCCCCCCCCeEECCEEcCCcEEEeeccchhhhc------------ccc-----------cccC
Confidence 99999999999998 679999999999999999999999999764221 110 0111
Q ss_pred CCCceEEEEEEeeCCCCCccceEEEeCCCceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEEEecCCCCcc
Q 011205 390 TKEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSEL 469 (491)
Q Consensus 390 ~~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvfE~~~~~~~~ 469 (491)
..+|+||+++|+++. +.||||||+||+||+|||||||||||| ++|||+|||||++|||+|+|+|||||+++.. .+
T Consensus 503 ~~~P~fy~g~f~~~~---~~DTfLd~~gwgKG~v~VNG~nLGRYW-~~GPQ~tLYvP~~~Lk~G~NeIvvfEl~~~~-~~ 577 (595)
T 4e8d_A 503 QGQPAFYAYDFTVEE---PKDTYLDLSEFGKGVAFVNGQNLGRFW-NVGPTLSLYIPHSYLKEGANRIIIFETEGQY-KE 577 (595)
T ss_dssp TTSCEEEEEEEEESS---CCBEEEECTTCCEEEEEETTEEEEEEE-TTCSBCEEEECGGGSCSEEEEEEEEESSSCC-CS
T ss_pred CCCCeEEEEEEEcCC---CCCEEEeCCCCceEEEEECCeeeeccc-CCCCeEEEEecHHHhCcCCceEEEEEecCCC-Cc
Confidence 356999999999965 369999999999999999999999999 6999999999999999999999999999743 46
Q ss_pred eEEEeecccccc
Q 011205 470 VIHSVNQPDFTC 481 (491)
Q Consensus 470 ~~~~~~~~~~~~ 481 (491)
.|+|+++|+++-
T Consensus 578 ~i~~~~~p~l~~ 589 (595)
T 4e8d_A 578 EIHLTRKPTLKH 589 (595)
T ss_dssp EEEEESSCCBCC
T ss_pred eEEeecccccCc
Confidence 999999999864
No 3
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.1e-105 Score=875.47 Aligned_cols=429 Identities=33% Similarity=0.637 Sum_probs=370.1
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHhhcCC-ceEEEeccCCccccccCCCcCCCeeeeecCCCCCCCCchhHHhHHHhc
Q 011205 1 MVQIENEFGSYGDDKEYLHHLVTLARAHLGK-DIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQKQFN 79 (491)
Q Consensus 1 mvQvENEYg~y~~d~~Ym~~L~~~~~~~~Gi-~vpl~t~dg~~~~~~~~G~~~~~~v~~~~~f~~~~~~~~~f~~~~~~~ 79 (491)
|+|||||||+|+.|++||+++++.+|+ .|+ +||++|+|.+. .+.++.++. ++.++||.++......|..++++
T Consensus 156 ~wqIeNEyg~yg~~~~y~~~l~~~l~~-~g~~~vp~~~~~~~~--~~~~~~~~~--~~~t~nf~s~~~~~~~~~~~~~~- 229 (612)
T 3d3a_A 156 MVQVENEYGAFGIDKPYISEIRDMVKQ-AGFTGVPLFQCDWNS--NFENNALDD--LLWTINFGTGANIDEQFKRLKEL- 229 (612)
T ss_dssp EEECSSCGGGTCCCHHHHHHHHHHHHH-HTCCSSCEEEEECTT--TGGGTCCTT--SEEEEEEETTCCHHHHHHHHHHH-
T ss_pred EEeecccccccCchHHHHHHHHHHHHH-cCCCchhheeccccc--ccccCCCCC--cccccccCCCccHHHHHHHHHHh-
Confidence 689999999998899999999999999 787 99999999763 456777766 77788997654444566666776
Q ss_pred CCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeecccCCCCcCCCCCCCCCCCCCCcccccC
Q 011205 80 APGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYD 159 (491)
Q Consensus 80 ~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYD 159 (491)
.|++|+|+||||+||||+||++++.+++++++..++++|++|+|+||||||||||||+|+||+. ..|+|++||||
T Consensus 230 -~p~~P~~~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hGGTNfG~~~ga~~----~~~~~~~tSYD 304 (612)
T 3d3a_A 230 -RPDTPLMCSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNISFSLYMTHGGTSFGHWGGANF----PNFSPTCTSYD 304 (612)
T ss_dssp -CTTSCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCEEEEECSBCCBCCTTCBCEET----TTTEEBCSBCC
T ss_pred -ccCCCceeeccccCccccccCCCccCCHHHHHHHHHHHHHcCCceEeeeeecccCCCcccccCC----CCccceeeeec
Confidence 3478999999999999999999999999999999999999999999999999999999999972 13889999999
Q ss_pred CCCccCCCCCCChHHHHHHHHHHHhhC--CCCCCCCCCCCCcccccceeeeceeeccccccccCCCCccccCCCcccccc
Q 011205 160 YDAPIKESGDVDNPKFKAIRRVVEKFS--PASLPSVLPDNEKAGFGPIQLQKTALLFDLLDVLDPADVVESENPLSMESV 237 (491)
Q Consensus 160 Y~Api~E~G~~t~pKy~~lr~~i~~~~--~~~l~~~p~~~~~~~y~~v~~~~~~~L~~~l~~~~~~~~~~s~~p~~~E~l 237 (491)
|||||+|+|++| |||.++|++|++|. +.+++++|++.++.+|+++++.+.++||+.+. +++.++.|++||+|
T Consensus 305 y~Apl~E~g~~~-~ky~~lr~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~p~~~E~l 378 (612)
T 3d3a_A 305 YDAPINESGKVT-PKYLEVRNLLGNYLPEGETLPEIPDSIPTIAIPTIKMTEMAVLFDNLP-----HPKESEDIRTMEAF 378 (612)
T ss_dssp TTCSBCTTSCCC-HHHHHHHHHHTTSSCTTCCCCCCCCCCCBCCEEEEECCEEEEGGGGCC-----CCEEESSCCBGGGG
T ss_pred cCCccCcCCCcc-HHHHHHHHHHHHhcccCCCcCCCCCCCcccccccEEEeeeeeHHHhCC-----CcccCCCCCCHHHh
Confidence 999999999999 59999999999994 35778889999999999999999999999874 45778899999999
Q ss_pred CCccceEEEEEeeCCCCCCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEccc-cceeEecccccCCCcEEEEEEEe
Q 011205 238 GQMFGFLLYVSEFGGKDYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWS-NRALSLPNFRCGSNISLFVLVEN 316 (491)
Q Consensus 238 gq~~GyvlYrt~~~~~~~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~-~~~~~lp~~~~~~~~~L~ILvEn 316 (491)
+|.+|||||||++........|++.+++|||+|||| |+++|++++.. ...+.++.. .+.++|+|||||
T Consensus 379 ~q~~gy~lY~t~i~~~~~~~~L~i~~~~D~a~Vfvn---------g~~~G~~~~~~~~~~~~~~~~--~~~~~L~iLven 447 (612)
T 3d3a_A 379 DQGWGSILYRTSLSASDKEQTLLITEAHDWAQVFLN---------GKKLATLSRLKGEGVVKLPPL--KEGDRLDILVEA 447 (612)
T ss_dssp TCCSSEEEEEEEECCBSSCEEEEEEEEESEEEEEET---------TEEEEEEETTTTCCEEEECCB--CTTEEEEEEEEC
T ss_pred CCCCCeEEEEEEecCCCCCceEEecCCCeEEEEEEC---------CEEEEEEEcccCCceEEeecC--CCCcEEEEEEEe
Confidence 999999999999976434558999999999999999 99999998853 355666643 356899999999
Q ss_pred CCccccCcCccCCccceeeEEECC----EEecCeEEEeecCCCCCCCCCcccccccccccchhhhhhhhccccCCCCCCC
Q 011205 317 MGRVNYGPYMFDEKGILSSVYLGG----KVLRGWKMIPVPFHNLNEVPKISPILEVAYSGLIKASARKKLEHNAGNITKE 392 (491)
Q Consensus 317 ~Gr~NyG~~~~~~KGI~g~V~l~g----~~l~~W~~~~l~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 392 (491)
|||+|||+.+.++|||+|+|+|++ +.+++|++++++|+++. .....|.+. .....+
T Consensus 448 ~Gr~NyG~~~~~~kGi~g~V~l~~~~~~~~l~~W~~y~l~l~~~~----------~~~~~~~~~----------~~~~~~ 507 (612)
T 3d3a_A 448 MGRMNFGKGIYDWKGITEKVELQSDKGVELVKDWQVYTIPVDYSF----------ARDKQYKQQ----------ENAENQ 507 (612)
T ss_dssp CCCCCSGGGGCCCCEEEEEEEEEETTEEEECCCEEEEEECCCHHH----------HHSSCCBC---------------CC
T ss_pred cCCCccCccccCCCCCCcceEEcCCcCceeccCceEEEeccCccc----------ccccccccc----------CCCCCC
Confidence 999999999988999999999998 88999999999997521 011123110 111247
Q ss_pred ceEEEEEEeeCCCCCccceEEEeCCCceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEEEecCCCCcceEE
Q 011205 393 PAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELESPNSELVIH 472 (491)
Q Consensus 393 p~~y~~~f~i~~~~~~~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvfE~~~~~~~~~~~ 472 (491)
|+|||++|+++.+ .||||||++|+||+|||||+|||||| .+|||||||||++|||+|+|+||||||++.. .+.|+
T Consensus 508 p~~yk~~f~~~~~---~Dt~Ld~~g~gKG~vwVNG~nlGRYW-~~GPqqtlYvP~~~Lk~g~N~ivvfE~~~~~-~~~i~ 582 (612)
T 3d3a_A 508 PAYYRSTFNLNEL---GDTFLNMMNWSKGMVWVNGHAIGRYW-EIGPQQTLYVPGCWLKKGENEIIILDMAGPS-KAETE 582 (612)
T ss_dssp CEEEEEEEEESSC---CBEEEECTTCCEEEEEETTEEEEEEE-TTCSCCEEEECGGGCCSEEEEEEEEESSCCS-SSEEE
T ss_pred CEEEEEEEECCCC---CcEEEecCCCCcEEEEECCEeEEeEE-ecCCEEEEEecHHHcCCCCcEEEEEEEcCCC-CceEE
Confidence 9999999999864 59999999999999999999999999 7999999999999999999999999999855 46999
Q ss_pred Eeeccccccc
Q 011205 473 SVNQPDFTCG 482 (491)
Q Consensus 473 ~~~~~~~~~~ 482 (491)
|+++|+++-.
T Consensus 583 ~~~~p~~~~~ 592 (612)
T 3d3a_A 583 GLRQPILDVQ 592 (612)
T ss_dssp EESSCCCSCC
T ss_pred eecccccCCC
Confidence 9999998643
No 4
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=100.00 E-value=1e-61 Score=542.74 Aligned_cols=170 Identities=22% Similarity=0.311 Sum_probs=134.6
Q ss_pred CccccccCCCCCC-----CHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCc-CCCeeeeecC----CCCC-----
Q 011205 1 MVQIENEFGSYGD-----DKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTI-RGDAVFAAVD----FSTG----- 65 (491)
Q Consensus 1 mvQvENEYg~y~~-----d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~-~~~~v~~~~~----f~~~----- 65 (491)
|+|||||||+|++ |++||++|++++|+ .||+|||||||++..+.+.+|++ ..+++|+.+. |.|.
T Consensus 174 ~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~-~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w 252 (1003)
T 3og2_A 174 LYQPENEYSGAAEGVLFPNKPYMQYVIDQARN-AGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAW 252 (1003)
T ss_dssp EEEESSCCCCBCTTSCSSCHHHHHHHHHHHHH-TTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCC
T ss_pred EEEcccccCcccccccCCCHHHHHHHHHHHHH-cCCceEEEEcCCccccccCCCccccceeeeccccccCcccccCCccc
Confidence 7899999999987 99999999999999 79999999999987666777653 2234565433 3332
Q ss_pred ---CCCchhHHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHH-----HHHHHHcCCe-eeEEEeecccCC
Q 011205 66 ---AEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASY-----LEKILSQNGS-AVLYMAHGGTNF 136 (491)
Q Consensus 66 ---~~~~~~f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~-----~~~~l~~g~s-~n~YM~hGGTNf 136 (491)
..+...|..++++ +|++|+||+|||+||||+||++++.+|+++++.. ++++|++|+| +|||||||||||
T Consensus 253 ~~~~~~~~~~~~~~~~--~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNF 330 (1003)
T 3og2_A 253 PDNGLPTTWRQDHLNI--SPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNW 330 (1003)
T ss_dssp CTTCSCCCHHHHHHHH--CTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCC
T ss_pred ccccchHHHHHHhhhc--CCCCCeEEEeeccccccccCCCCCCCChhhhhHHHHHHHHHHHHhcCCceEEEEEeccccCc
Confidence 1122345555665 3578999999999999999999887776654433 4788999997 999999999999
Q ss_pred CCcCCCCCCCCCCCCCCcccccCCCCccCCCCCC-ChHHHHHHHHHHHhh
Q 011205 137 GFYNGANTGNTESDYQPDLTSYDYDAPIKESGDV-DNPKFKAIRRVVEKF 185 (491)
Q Consensus 137 G~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~-t~pKy~~lr~~i~~~ 185 (491)
|||+++ +++|||||||||+|+|++ | |||.+|| +|..|
T Consensus 331 G~~~~~----------~~~TSYDYdAPL~E~G~~~t-~Ky~~lK-~l~~f 368 (1003)
T 3og2_A 331 GNLGHP----------GGYTSYDYGASIREDRRIDR-EKYSELK-LQGQF 368 (1003)
T ss_dssp TTCBCT----------TSCSBCCTTCSBCTTCCCCS-HHHHHHH-HHHHH
T ss_pred cccCCC----------CccccccCCCcccccCCcCc-hHHHHHH-HHHHH
Confidence 999643 368999999999999999 7 5999998 44443
No 5
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=100.00 E-value=2.5e-60 Score=538.86 Aligned_cols=224 Identities=22% Similarity=0.351 Sum_probs=163.8
Q ss_pred ccceEEEEEeeCCCCCCceeEec---CcCcEEEEEEcCCCCCCCCCCeEEEEEEccc-----cceeEecccccCCCcEEE
Q 011205 240 MFGFLLYVSEFGGKDYGSSLLIS---KVHDRAQVFISCPTEDNSGRPTYVGTIERWS-----NRALSLPNFRCGSNISLF 311 (491)
Q Consensus 240 ~~GyvlYrt~~~~~~~~~~L~i~---~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~-----~~~~~lp~~~~~~~~~L~ 311 (491)
..|.+|||++|..+.....|.+. ++++.++|||| |+++|+..... +..++++.....+.|+|+
T Consensus 687 ~~G~lwYR~~F~~~~~~~~L~~~~~gG~~~~~~VwvN---------G~~lGs~~g~~~~~~~~~~~~l~~L~~gg~NvI~ 757 (971)
T 1tg7_A 687 HTGALLFRGHFTANGKEKTFFVQTKGGTAYGHSIWIN---------ETYVGSWAGTSINDNNNATYTLPTLQSGKNYVIT 757 (971)
T ss_dssp CSSCEEEEEEEECCSCCCEEEEEEECSTTCCEEEEET---------TEEEEEECCCTTCSEEEEEEECCCCCTTCEEEEE
T ss_pred cCceEEEEEEEECCCcceEEEEEecCcccceEEEEEC---------CEEEeeeecCCCcccCceEEEEeEecCCCceEEE
Confidence 34559999999876566788888 99999999999 99999986532 245667433233579999
Q ss_pred EEEEeCCcccc---CcCc-cCCccceeeEEECCEEecC--eEEEeec--------CCCCCCCCCccccc------ccccc
Q 011205 312 VLVENMGRVNY---GPYM-FDEKGILSSVYLGGKVLRG--WKMIPVP--------FHNLNEVPKISPIL------EVAYS 371 (491)
Q Consensus 312 ILvEn~Gr~Ny---G~~~-~~~KGI~g~V~l~g~~l~~--W~~~~l~--------l~~~~~~~~~~~~~------~~~~~ 371 (491)
|||+|||+.|+ |+.+ ++++||. +|.|.+..... |+|.+-. ..+.-+-.+++.++ +...+
T Consensus 758 Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~L~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p~~~~~ 836 (971)
T 1tg7_A 758 VVIDNMGLDEDWTIGSEDMKNPRGII-QYSLSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQPQPPTQ 836 (971)
T ss_dssp EEECCCCCCCCCSBTCCGGGCCCEEE-EEEETTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSSSCCCT
T ss_pred EEEecCCCCcccccCccccccCCcce-EEEEeccCCCCceEEEeeccccccccccccccccccccccccccccCCCCCcc
Confidence 99999999999 8665 4599999 89998876544 9997521 11100112333332 23344
Q ss_pred cchhhhhhhhccccCCCCCCCceEEEEEEeeCCCCCccc--eEEEeCCCc------eEEEEECCeeceeccCCCCCeeeE
Q 011205 372 GLIKASARKKLEHNAGNITKEPAFYVGRFSIDKVNQVKD--TYLSFSGWG------KGIAFVNEFNLGRFWPSFGPQCDL 443 (491)
Q Consensus 372 ~w~~~~~~~~~~~~~~~~~~~p~~y~~~f~i~~~~~~~D--t~Ld~~g~~------KG~v~VNG~nlGRYW~~~GPQ~tl 443 (491)
.|.+.++ .......+++|||++|+|+.+.. .| +.|+|..++ ||+|||||++|||||+.+|||+++
T Consensus 837 ~W~~~sp------~~gl~~~Gv~wyr~~f~L~~p~g-~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~~pqr~y 909 (971)
T 1tg7_A 837 KWDSSSP------FTGLTKPGIRFYSTSFDLDLPSG-YDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNIGPQTSF 909 (971)
T ss_dssp TSBCCCT------TTCBSSSEEEEEEEEEECCCCTT-EECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTTCSCCEE
T ss_pred cccCCCC------cCCCCCCceEEEEEEEeccCCCC-CCceEEEEcCCCCCCCccceEEEEECCEEEeeecCCCCCCEEE
Confidence 5543211 00111345899999999665532 34 678888888 999999999999999999999999
Q ss_pred ecCCccc-cccCcEEEE----EEecCCCCcceEEEeecccccc
Q 011205 444 YVPAPIL-RHGENLVVI----FELESPNSELVIHSVNQPDFTC 481 (491)
Q Consensus 444 YVP~~~L-k~G~N~ivv----fE~~~~~~~~~~~~~~~~~~~~ 481 (491)
+||+.|| |+|+|+|+| +|++++++. .+.+++......
T Consensus 910 ~VP~giLn~~G~N~i~vrv~~~~~~Gg~~~-~i~l~~~~~~~~ 951 (971)
T 1tg7_A 910 PVPEGILNYHGTNWLALSLWAQEDNGAKLD-SFELINTTPVLT 951 (971)
T ss_dssp EECBTTBCTTSEEEEEEEEEECSTTCBCCS-CEEEEECCCEEC
T ss_pred ECCHHHhCcCCccEEEEEEecCCCCCCCcc-ceEEEEccEEec
Confidence 9999999 899999999 888887664 777777644433
No 6
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=97.37 E-value=0.00051 Score=75.56 Aligned_cols=146 Identities=13% Similarity=0.145 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHhhcCCceEEEeccCCccccccC-CCcCCCeeeeecCCCCC------------------CCC-chhHH--
Q 011205 16 EYLHHLVTLARAHLGKDIILYTTDGGTRETLLK-GTIRGDAVFAAVDFSTG------------------AEP-WPIFK-- 73 (491)
Q Consensus 16 ~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~-G~~~~~~v~~~~~f~~~------------------~~~-~~~f~-- 73 (491)
+|++.+.+.+|+ ...+.|++|+..+....+.. ...+..|+.+.+++..+ ..+ ...|.
T Consensus 220 ~~~~~~~~~ir~-~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~d 298 (645)
T 1kwg_A 220 AFNRLQVEILRA-HAPGKFVTHNFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHD 298 (645)
T ss_dssp HHHHHHHHHHHH-HSTTCEEECEECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCcEEEeECcCCCCcCHHHHHhcCcEEEECCCCccccccccccccccccccccCchhHHHHHHH
Confidence 577888899999 58888988886321000000 00122346665444310 011 11121
Q ss_pred hHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCe-eeEEEeecccCCCCcCCCCCCCCCCCCC
Q 011205 74 LQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGS-AVLYMAHGGTNFGFYNGANTGNTESDYQ 152 (491)
Q Consensus 74 ~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~Ga~~~~~~~~~~ 152 (491)
..+.. .++|+++|||.+|..+ |+.......+..+.......++.|+. ++|+-+... . +
T Consensus 299 l~r~~---~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w~~~---------~-------~- 357 (645)
T 1kwg_A 299 LYRGV---GRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQA---------P-------F- 357 (645)
T ss_dssp HHHHH---TTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBCC---------S-------S-
T ss_pred HHHhh---cCCCEEEecCCCCCCC-CccCCCCCCccHHHHHHHHHHhcCCCEEEEeeeccC---------C-------C-
Confidence 11222 1379999999999765 88654444456666667778899985 555422221 1 1
Q ss_pred CcccccCCCCccCCCCCCChHHHHHHHHHHHhhC
Q 011205 153 PDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKFS 186 (491)
Q Consensus 153 p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~~~~ 186 (491)
...+|+++ .|+++|.+++ +|.+++++.+...
T Consensus 358 -~~E~~~~g-~l~~~g~~~~-~~~e~~~~~~~l~ 388 (645)
T 1kwg_A 358 -AQEQMHAG-LHRPDSAPDQ-GFFEAKRVAEELA 388 (645)
T ss_dssp -STTTTSCC-SBCTTSCBCH-HHHHHHHHHHHHH
T ss_pred -Cccccccc-ccCCCCCcCH-HHHHHHHHHHHHH
Confidence 34688888 8999999984 9999998776664
No 7
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=95.90 E-value=0.032 Score=61.84 Aligned_cols=94 Identities=19% Similarity=0.033 Sum_probs=66.1
Q ss_pred CCccceEEEEEeeCCCC----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCC-CcEEE
Q 011205 238 GQMFGFLLYVSEFGGKD----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGS-NISLF 311 (491)
Q Consensus 238 gq~~GyvlYrt~~~~~~----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~-~~~L~ 311 (491)
+...|..|||++|..+. ....|.+.++...|.|||| |+++|..... ....++|+.....+ .|+|.
T Consensus 56 ~~~~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vN---------G~~vg~~~~g~~~f~~dIt~~l~~G~~N~l~ 126 (692)
T 3fn9_A 56 SFYEGAGYYRKTQFFPHDLEGKRVFLRFEGVGACAEVYVN---------GKLAGTHKGGYSAFACEIGTALKLGAENEII 126 (692)
T ss_dssp CCCCSEEEEEEEEEECGGGTTCEEEEEESCCBSEEEEEET---------TEEEEEEECTTSCEEEECGGGCCTTEEEEEE
T ss_pred CCcceEEEEEEEEEECchhCCCeEEEEECCccEeeEEEEC---------CEEeeeEcCCcceEEEEChHhcCCCCceEEE
Confidence 34568999999997652 3457888999999999999 9999987542 22345665433334 79999
Q ss_pred EEEEeCCccccCcC----ccCCccceeeEEECC
Q 011205 312 VLVENMGRVNYGPY----MFDEKGILSSVYLGG 340 (491)
Q Consensus 312 ILvEn~Gr~NyG~~----~~~~KGI~g~V~l~g 340 (491)
|.|.|.-..++-+. +...-||..+|.|--
T Consensus 127 V~v~~~~~~~~~p~~~d~~~~~~GI~R~V~L~~ 159 (692)
T 3fn9_A 127 VKADNKARPDVIPVNQNLFGVYGGIYRPVWLIV 159 (692)
T ss_dssp EEEECCCCTTSSSCSSSSSCCCCBCCSCEEEEE
T ss_pred EEEECCCCCCcCCCCCcccccCCCcceeEEEEE
Confidence 99999765443221 112469999999843
No 8
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=95.71 E-value=0.042 Score=59.87 Aligned_cols=102 Identities=17% Similarity=0.097 Sum_probs=67.8
Q ss_pred CccceEEEEEeeCCCC----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCCCc-EEEE
Q 011205 239 QMFGFLLYVSEFGGKD----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGSNI-SLFV 312 (491)
Q Consensus 239 q~~GyvlYrt~~~~~~----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~~~-~L~I 312 (491)
...|.+|||++|..+. ....|.+.++...|.|||| |+++|..... ....++|+.....+.+ +|.|
T Consensus 64 ~~~G~~wY~~~f~~p~~~~~~~~~L~f~gv~~~a~V~vN---------G~~vg~~~~~~~p~~~dit~~l~~G~nn~l~V 134 (605)
T 3lpf_A 64 NYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVN---------NQEVMEHQGGYTPFEADVTPYVIAGKSVRITV 134 (605)
T ss_dssp TCCSEEEEEEEEECCTTCSSCEEEEEESCCBSEEEEEES---------SCEEEEECCSSSCEEEECGGGCCTTSEEEEEE
T ss_pred ccceEEEEEEEEECCcccCCCEEEEEECCcceEEEEEEC---------CEEEEEEcCCCCcceeechhhccCCCeEEEEE
Confidence 4579999999997752 3457888999999999999 9999986432 1234555533333454 8999
Q ss_pred EEEeCCccc------------------cCcCccCCccceeeEEECCE---EecCeEEE
Q 011205 313 LVENMGRVN------------------YGPYMFDEKGILSSVYLGGK---VLRGWKMI 349 (491)
Q Consensus 313 LvEn~Gr~N------------------yG~~~~~~KGI~g~V~l~g~---~l~~W~~~ 349 (491)
.|.|.-+.. |...+...-||..+|.|-.. -+..+.+.
T Consensus 135 ~v~n~~~~~~~P~g~~~~~~~g~~k~~~~~d~~~~~GI~R~V~L~~~~~~~i~d~~v~ 192 (605)
T 3lpf_A 135 CVNNELNWQTIPPGMVITDENGKKKQSYFHDFFNYAGIHRSVMLYTTPNTWVDDITVV 192 (605)
T ss_dssp EEECCCCTTSSSCEEEEECTTSCEEEEESSSBCCCCBCCSCEEEEEECSSEEEEEEEE
T ss_pred EEecCCCcccCCCccccccccCcccccccccccccCcccceEEEEEECCeeEeeeEEE
Confidence 998853211 11122346899999998543 24455554
No 9
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=95.67 E-value=0.033 Score=60.67 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=50.2
Q ss_pred CccceEEEEEeeCCCC-------CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCCC---
Q 011205 239 QMFGFLLYVSEFGGKD-------YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGSN--- 307 (491)
Q Consensus 239 q~~GyvlYrt~~~~~~-------~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~~--- 307 (491)
...|++|||++|..+. ....|.+.++...+.|||| |+++|..... ....++|+.....++
T Consensus 74 ~~~G~~wYr~~f~~p~~~~~~~~~~~~L~f~gv~~~a~V~vN---------G~~vg~~~~g~~~~~~dit~~l~~g~~~~ 144 (613)
T 3hn3_A 74 HFVGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVN---------GVDTLEHEGGYLPFEADISNLVQVGPLPS 144 (613)
T ss_dssp TCCSEEEEEEEECCCHHHHHCTTEEEEEEESCCCSEEEEEET---------TEEEEEEESSSSCEEEECHHHHCCC---C
T ss_pred CCceeEEEEEEEEeCchhhhcCCCEEEEEECCcceEEEEEEC---------CEEEeEEcCCcceEEEEChhhhcCCCCCc
Confidence 3569999999998752 2356778899999999999 9999986542 123455543222233
Q ss_pred -cEEEEEEEeC
Q 011205 308 -ISLFVLVENM 317 (491)
Q Consensus 308 -~~L~ILvEn~ 317 (491)
|+|.|.|.|.
T Consensus 145 ~n~l~V~v~n~ 155 (613)
T 3hn3_A 145 RLRITIAINNT 155 (613)
T ss_dssp CEEEEEEEECC
T ss_pred ceEEEEEEeCC
Confidence 8999999874
No 10
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=95.63 E-value=0.02 Score=63.48 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCcccccc-CcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHG-ENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G-~N~ivvf 460 (491)
.+..|||.+|++|.......++|++.|. ....|||||.-+|.-.-..-| .++=|+ ++||.| +|+|.|-
T Consensus 59 ~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~~~-f~~dIt-~~l~~G~~N~l~V~ 128 (692)
T 3fn9_A 59 EGAGYYRKTQFFPHDLEGKRVFLRFEGVGACAEVYVNGKLAGTHKGGYSA-FACEIG-TALKLGAENEIIVK 128 (692)
T ss_dssp CSEEEEEEEEEECGGGTTCEEEEEESCCBSEEEEEETTEEEEEEECTTSC-EEEECG-GGCCTTEEEEEEEE
T ss_pred ceEEEEEEEEEECchhCCCeEEEEECCccEeeEEEECCEEeeeEcCCcce-EEEECh-HhcCCCCceEEEEE
Confidence 4679999999998642224689999996 579999999999984311113 344487 789998 8998884
No 11
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=95.47 E-value=0.034 Score=60.64 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=49.4
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCc-EEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGEN-LVVI 459 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N-~ivv 459 (491)
.+..||+.+|++|.......++|++.+. ....|||||.-+|+-+-..-| .++=|+ ++||+|+| +|+|
T Consensus 66 ~G~~wY~~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~p-~~~dit-~~l~~G~nn~l~V 134 (605)
T 3lpf_A 66 AGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTP-FEADVT-PYVIAGKSVRITV 134 (605)
T ss_dssp CSEEEEEEEEECCTTCSSCEEEEEESCCBSEEEEEESSCEEEEECCSSSC-EEEECG-GGCCTTSEEEEEE
T ss_pred ceEEEEEEEEECCcccCCCEEEEEECCcceEEEEEECCEEEEEEcCCCCc-ceeech-hhccCCCeEEEEE
Confidence 4678999999998643224689999986 679999999999986521223 334477 78999987 5555
No 12
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=95.44 E-value=0.044 Score=61.70 Aligned_cols=95 Identities=17% Similarity=0.158 Sum_probs=66.5
Q ss_pred cceEEEEEeeCCCC----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCCCcEEEEEEE
Q 011205 241 FGFLLYVSEFGGKD----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGSNISLFVLVE 315 (491)
Q Consensus 241 ~GyvlYrt~~~~~~----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~~~~L~ILvE 315 (491)
.|..|||++|..+. ....|.+.++...+.|||| |+++|..... ....++|+.....+.|+|.|.|.
T Consensus 65 ~g~~wYrk~f~vp~~~~~~~v~L~f~gv~~~a~V~vN---------G~~vG~~~~g~~pf~~DIT~~Lk~G~N~L~V~V~ 135 (801)
T 3gm8_A 65 AGISWYRKTFTIPSKWKNKKVQILFEGVYLNSEVWIN---------GHWLGKRPNGYISFVYDLTPYLQEGKNQIAVKVD 135 (801)
T ss_dssp CEEEEEEEEEECCSGGGSCEEEEEESCCBSCEEEEET---------TEEEEEECCSSCCEEEECGGGCCSSEEEEEEEEE
T ss_pred CceEEEEEEEEcCcccCCCEEEEEECccceEEEEEEC---------CEEeecccCCcccEEEECcHhccCCCcEEEEEEE
Confidence 68999999998753 3457888999999999999 9999987532 12345665433345699999999
Q ss_pred eCCccccCcCccCCccceeeEEECCE---EecCe
Q 011205 316 NMGRVNYGPYMFDEKGILSSVYLGGK---VLRGW 346 (491)
Q Consensus 316 n~Gr~NyG~~~~~~KGI~g~V~l~g~---~l~~W 346 (491)
|.-..+.. ....-||..+|.|--. -+..|
T Consensus 136 n~~~~~~~--w~~~~GI~R~V~L~~~~~~~I~~~ 167 (801)
T 3gm8_A 136 HSKALTGR--WYTGSGIYRPVYLLVSNPTHIPYS 167 (801)
T ss_dssp ECSCCCCS--SCCCCBCCSCEEEEEECSSBCCTT
T ss_pred CCCCCCCc--cccCCCeeeEEEEEEECCEEEecc
Confidence 86543321 1234899999998543 24555
No 13
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=95.21 E-value=0.081 Score=58.23 Aligned_cols=92 Identities=18% Similarity=0.070 Sum_probs=63.1
Q ss_pred ccceEEEEEeeCCCC----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCC-CcEEEEE
Q 011205 240 MFGFLLYVSEFGGKD----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGS-NISLFVL 313 (491)
Q Consensus 240 ~~GyvlYrt~~~~~~----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~-~~~L~IL 313 (491)
..|..|||++|..+. ....|.+.++...|.|||| |+++|..... ....++|+.....+ .|+|.|.
T Consensus 47 ~~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vN---------G~~vg~~~~~~~~~~~dit~~l~~G~~N~l~V~ 117 (667)
T 3cmg_A 47 KRGIGNYEKALYIRPEWKGKRLFLRFDGVNSIADVFIN---------RKHIGEHRGGYGAFIFEITDLVKYGEKNSVLVR 117 (667)
T ss_dssp CCSEEEEEEEEECCGGGTTSEEEEEESCCBSEEEEEET---------TEEEEEEECSSSCEEEECTTTSCTTSEEEEEEE
T ss_pred cceeEEEEEEEECCcccCCCEEEEEECCccceeEEEEC---------CEEEeeecCCcccEEEECCHHHCCCCCcEEEEE
Confidence 468999999998752 3457888999999999999 9999987532 12345554333334 6999999
Q ss_pred EEeCCccccCc---CccCCccceeeEEECC
Q 011205 314 VENMGRVNYGP---YMFDEKGILSSVYLGG 340 (491)
Q Consensus 314 vEn~Gr~NyG~---~~~~~KGI~g~V~l~g 340 (491)
|.|.-..+.-+ .+...-||..+|.|..
T Consensus 118 v~~~~~~~~~p~~~d~~~~~GI~R~V~L~~ 147 (667)
T 3cmg_A 118 ANNGEQLDIMPLVGDFNFYGGIYRDVHLLI 147 (667)
T ss_dssp EECCCCSSSSCSSCSSCCCCBCCSCEEEEE
T ss_pred EecCCCcccCCccCcccccCccCceEEEEE
Confidence 99863322111 1223579988898843
No 14
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=94.88 E-value=0.048 Score=60.08 Aligned_cols=68 Identities=19% Similarity=0.307 Sum_probs=49.7
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCcccccc-CcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHG-ENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G-~N~ivvf 460 (491)
.+..|||.+|++|.......++|++.+- ....|||||.-+|+-....-| .++=|.. +|+.| +|+|.|-
T Consensus 48 ~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~~-~~~dit~-~l~~G~~N~l~V~ 117 (667)
T 3cmg_A 48 RGIGNYEKALYIRPEWKGKRLFLRFDGVNSIADVFINRKHIGEHRGGYGA-FIFEITD-LVKYGEKNSVLVR 117 (667)
T ss_dssp CSEEEEEEEEECCGGGTTSEEEEEESCCBSEEEEEETTEEEEEEECSSSC-EEEECTT-TSCTTSEEEEEEE
T ss_pred ceeEEEEEEEECCcccCCCEEEEEECCccceeEEEECCEEEeeecCCccc-EEEECCH-HHCCCCCcEEEEE
Confidence 4679999999998632123589999986 689999999999986522223 2233664 78988 7998884
No 15
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=94.52 E-value=0.054 Score=61.00 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=49.5
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvf 460 (491)
.+..|||.+|++|.......++|++.|. ....|||||+-+|.---..-| .++=|+. .||.|+|+|.|-
T Consensus 65 ~g~~wYrk~f~vp~~~~~~~v~L~f~gv~~~a~V~vNG~~vG~~~~g~~p-f~~DIT~-~Lk~G~N~L~V~ 133 (801)
T 3gm8_A 65 AGISWYRKTFTIPSKWKNKKVQILFEGVYLNSEVWINGHWLGKRPNGYIS-FVYDLTP-YLQEGKNQIAVK 133 (801)
T ss_dssp CEEEEEEEEEECCSGGGSCEEEEEESCCBSCEEEEETTEEEEEECCSSCC-EEEECGG-GCCSSEEEEEEE
T ss_pred CceEEEEEEEEcCcccCCCEEEEEECccceEEEEEECCEEeecccCCccc-EEEECcH-hccCCCcEEEEE
Confidence 4678999999998642224689999995 789999999999984211113 2333654 689999998874
No 16
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=94.03 E-value=0.0078 Score=64.52 Aligned_cols=27 Identities=33% Similarity=0.548 Sum_probs=24.8
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHh
Q 011205 1 MVQIENEFGSYGDDKEYLHHLVTLARA 27 (491)
Q Consensus 1 mvQvENEYg~y~~d~~Ym~~L~~~~~~ 27 (491)
|+|||||||++++++.|++++++.+|+
T Consensus 200 ~wQIeNEyG~~g~~~~Y~~~~~~aFR~ 226 (552)
T 3u7v_A 200 MVQVENETGTYGSVRDFGPAAQKVFNG 226 (552)
T ss_dssp EEEEEESCSBSSCSSCCSHHHHHHHHS
T ss_pred EEEecccCCCCCCcchhhHHHHHHHHH
Confidence 689999999999889999999999886
No 17
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=93.89 E-value=0.078 Score=61.16 Aligned_cols=68 Identities=22% Similarity=0.188 Sum_probs=50.1
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvf 460 (491)
.+..|||.+|++|..-....++|.+.|- ....|||||.-+|+-.-..-| .++=|. +.||+|+|+|.|-
T Consensus 125 ~~~~~Yrr~F~vp~~~~g~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p-~~~DIT-~~L~~G~N~L~V~ 193 (1010)
T 3bga_A 125 NEVGSYRRTFKVPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQGSKTA-AEWDIT-DVLSEGENVVALE 193 (1010)
T ss_dssp CEEEEEEEEEECCGGGTTSEEEEEESCEESEEEEEETTEEEEEEECSSSC-EEEECG-GGCCSSEEEEEEE
T ss_pred CcEEEEEEEeEeCcccCCCEEEEEECCCCceeEEEECCEEEeeEeCCCCc-ceeehh-hhccCCCcEEEEE
Confidence 4578999999998642224689999995 689999999999975421223 233366 5899999999884
No 18
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=93.65 E-value=0.099 Score=60.41 Aligned_cols=69 Identities=23% Similarity=0.216 Sum_probs=50.6
Q ss_pred CCceEEEEEEeeCCCC--Cc-cceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEEE
Q 011205 391 KEPAFYVGRFSIDKVN--QV-KDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFE 461 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~--~~-~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvfE 461 (491)
.+..|||.+|++|..- .. ..++|.+.|- ....|||||.-+|+-.-..=| .++=|. +.||+|+|+|.|-=
T Consensus 117 ~~~~wYrr~F~vp~~~~~~g~~rv~L~F~gv~~~a~V~vNG~~VG~~~gg~~p-~~~DIT-~~Lk~G~N~L~V~V 189 (1024)
T 1yq2_A 117 NPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLA-QEFDVS-DALRAGSNLLVVRV 189 (1024)
T ss_dssp CCEEEEEEEEEECGGGGSTTEEEEEEEESCEESCEEEEETTEEEEEECCTTSC-EEEECT-TTCCSEEEEEEEEE
T ss_pred CceEEEEEEeEECchHhcCCCceEEEEECCCCceEEEEECCEEEEEEeCCccc-eEEecH-HhccCCCcEEEEEE
Confidence 4678999999998642 22 3589999995 679999999999975421123 233376 68999999998843
No 19
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=93.55 E-value=0.2 Score=57.82 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=65.2
Q ss_pred cceEEEEEeeCCCC----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCCCcEEEEEEE
Q 011205 241 FGFLLYVSEFGGKD----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGSNISLFVLVE 315 (491)
Q Consensus 241 ~GyvlYrt~~~~~~----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~~~~L~ILvE 315 (491)
.+..|||++|..+. ....|.+.++...+.|||| |+++|..... ....++|......+.|+|.|.|.
T Consensus 125 ~~~~~Yrr~F~vp~~~~g~~v~L~F~gv~~~a~V~vN---------G~~vG~~~gg~~p~~~DIT~~L~~G~N~L~V~V~ 195 (1010)
T 3bga_A 125 NEVGSYRRTFKVPADWKGRRVVLCCEGVISFYYVWVN---------GKLLGYNQGSKTAAEWDITDVLSEGENVVALEVY 195 (1010)
T ss_dssp CEEEEEEEEEECCGGGTTSEEEEEESCEESEEEEEET---------TEEEEEEECSSSCEEEECGGGCCSSEEEEEEEEE
T ss_pred CcEEEEEEEeEeCcccCCCEEEEEECCCCceeEEEEC---------CEEEeeEeCCCCcceeehhhhccCCCcEEEEEEE
Confidence 67889999998752 3457888999999999999 9999987532 12345565433346799999997
Q ss_pred eCCccccCcCccC-----CccceeeEEECCE---EecCeEEE
Q 011205 316 NMGRVNYGPYMFD-----EKGILSSVYLGGK---VLRGWKMI 349 (491)
Q Consensus 316 n~Gr~NyG~~~~~-----~KGI~g~V~l~g~---~l~~W~~~ 349 (491)
+.- -|.++++ .-||..+|.|-.. .+..+.+.
T Consensus 196 ~~~---d~s~~e~~d~w~~sGI~R~V~L~~~p~~~I~d~~v~ 234 (1010)
T 3bga_A 196 RWS---SGAYLECQDMWRLSGIERDVYLYSTPKQYIADYKVS 234 (1010)
T ss_dssp SCC---GGGGGBCCSEEECCEECSCEEEEEECSSEEEEEEEE
T ss_pred ecC---CCcccccCCccccCCcceEEEEEEeCCceEeeEEEE
Confidence 521 1222222 3799999998543 23445443
No 20
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=93.34 E-value=0.087 Score=59.70 Aligned_cols=66 Identities=24% Similarity=0.246 Sum_probs=48.8
Q ss_pred ceEEEEEEeeCCCC-CccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEE
Q 011205 393 PAFYVGRFSIDKVN-QVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIF 460 (491)
Q Consensus 393 p~~y~~~f~i~~~~-~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvf 460 (491)
..|||.+|++|... ....++|.+.|- ....|||||+-+|+-.-..-| .++=|+. +||.|+|+|.|-
T Consensus 65 ~~~Yr~~f~~p~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~~-~~~dIt~-~l~~G~N~L~V~ 132 (848)
T 2je8_A 65 DWEYRTSFIVSEEQLNRDGIQLIFEGLDTYADVYLNGSLLLKADNMFVG-YTLPVKS-VLRKGENHLYIY 132 (848)
T ss_dssp CEEEEEEEEECHHHHTSSEEEEEESCCBSEEEEEETTEEEEEECBTTCC-EEEECGG-GCCSEEEEEEEE
T ss_pred CEEEEEEEEcChhhcCCCeEEEEECCCCceeEEEECCEEeccccCCCCC-EEEcChH-hhcCCCcEEEEE
Confidence 46999999998521 114689999996 589999999999996621223 2333766 889999999884
No 21
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=93.15 E-value=0.075 Score=61.40 Aligned_cols=68 Identities=24% Similarity=0.283 Sum_probs=49.8
Q ss_pred CCceEEEEEEeeCCCC-CccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVN-QVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~-~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvf 460 (491)
++..|||.+|++|..- ....++|++.|. ....|||||.-+|.---..-| .++=|+. .||.|+|+|.|-
T Consensus 111 n~~g~Yrr~f~vp~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p-~~~DIT~-~lk~G~N~L~V~ 180 (1032)
T 3oba_A 111 NPTGVYARTFELDSKSIESFEHRLRFEGVDNCYELYVNGQYVGFNKGSRNG-AEFDIQK-YVSEGENLVVVK 180 (1032)
T ss_dssp CCEEEEEEEEEECHHHHHHEEEEEEESCEESEEEEEETTEEEEEEECTTSC-EEEECTT-TCCSEEEEEEEE
T ss_pred CCeEEEEEEEEECchhcCCCEEEEEECCcceeEEEEECCEEEEEEeCCccc-EEEEChh-hccCCcEEEEEE
Confidence 5679999999998531 124689999996 579999999999974311223 2344765 788999998874
No 22
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=92.95 E-value=0.1 Score=56.81 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=48.3
Q ss_pred CCceEEEEEEeeCCC---CCccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccC----cEEEEE
Q 011205 391 KEPAFYVGRFSIDKV---NQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGE----NLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~---~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~----N~ivvf 460 (491)
.+..|||.+|++|.. .....++|.+.+. ....|||||.-+|+-.-..-| .++=|+ ++||.|+ |+|+|-
T Consensus 76 ~G~~wYr~~f~~p~~~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~~~-~~~dit-~~l~~g~~~~~n~l~V~ 151 (613)
T 3hn3_A 76 VGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLP-FEADIS-NLVQVGPLPSRLRITIA 151 (613)
T ss_dssp CSEEEEEEEECCCHHHHHCTTEEEEEEESCCCSEEEEEETTEEEEEEESSSSC-EEEECH-HHHCCC---CCEEEEEE
T ss_pred ceeEEEEEEEEeCchhhhcCCCEEEEEECCcceEEEEEECCEEEeEEcCCcce-EEEECh-hhhcCCCCCcceEEEEE
Confidence 356799999999853 1113689999986 679999999999985421223 344476 6889885 888774
No 23
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=92.85 E-value=0.0072 Score=64.73 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=64.7
Q ss_pred ccccccCCCCCC------CHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCCCeeeeecCCCCCCCCchhHHhH
Q 011205 2 VQIENEFGSYGD------DKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIFKLQ 75 (491)
Q Consensus 2 vQvENEYg~y~~------d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~~~v~~~~~f~~~~~~~~~f~~~ 75 (491)
+|||||||.++. ++.+++.+++.+++..| +++. +...-+. ..+. |.
T Consensus 178 ~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~yg-------------------tl~~--ln~aWg~--~~~~---~~-- 229 (516)
T 1vem_A 178 YTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYG-------------------SLNE--VNKAWGT--KLIS---EL-- 229 (516)
T ss_dssp CCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHS-------------------SHHH--HHHHHTC--CCSS---GG--
T ss_pred cccccCcCCCCccchhccCHHHHHHHHHHHHHhcC-------------------CHHH--HHHHhCC--CCCC---HH--
Confidence 799999998742 77888888888776322 1111 1000000 0001 11
Q ss_pred HHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCe-------eeEEEeecccCCCCc
Q 011205 76 KQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGS-------AVLYMAHGGTNFGFY 139 (491)
Q Consensus 76 ~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-------~n~YM~hGGTNfG~~ 139 (491)
++. +|..+ +.|++.||+++||........+.++..++++++.+.+ +.+..--.|.+|-+.
T Consensus 230 -~i~-~P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y~ 296 (516)
T 1vem_A 230 -AIL-PPSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYN 296 (516)
T ss_dssp -GCC-SCSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTT
T ss_pred -HhC-Ccccc--ccccCCCchhhhcChHHHhchHHHHHHHHHHHHHHHHhcCCCcCceEEEEeCcceecCC
Confidence 221 22222 4688999999999877666677777778888776543 456677778887654
No 24
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=92.83 E-value=0.11 Score=60.15 Aligned_cols=68 Identities=24% Similarity=0.244 Sum_probs=49.6
Q ss_pred CCceEEEEEEeeCCCCC-ccceEEEeCCC-ceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQ-VKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~-~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvf 460 (491)
.+..|||.+|++|.... ...++|.+.|- ....|||||.-+|+-.-..-| .++=|.. +||.|+|+|.|-
T Consensus 118 ~~~g~Yrr~F~vp~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p-~~~DIT~-~L~~G~N~L~V~ 187 (1023)
T 1jz7_A 118 NPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLP-SEFDLSA-FLRAGENRLAVM 187 (1023)
T ss_dssp CCEEEEEEEEEECHHHHHSSEEEEEESCEESEEEEEETTEEEEEEECTTSC-EEEECTT-TCCSEEEEEEEE
T ss_pred CcEEEEEEEEEeCchhcCCCEEEEEECCCCcceEEEECCEEEccccCCCCc-eEEecHh-hccCCCcEEEEE
Confidence 46789999999985311 13589999986 679999999999976522223 2233655 789999999884
No 25
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=92.61 E-value=0.24 Score=56.72 Aligned_cols=168 Identities=24% Similarity=0.358 Sum_probs=126.5
Q ss_pred CccccccCCCCC------CCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCC-CeeeeecC----CCCCC-CC
Q 011205 1 MVQIENEFGSYG------DDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRG-DAVFAAVD----FSTGA-EP 68 (491)
Q Consensus 1 mvQvENEYg~y~------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~-~~v~~~~~----f~~~~-~~ 68 (491)
|+|||||||++. .+++||++|++++|+ .|++||++|||++....+.++.+.+ .|+++.+. |.|+. +.
T Consensus 154 ~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~-~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~ 232 (971)
T 1tg7_A 154 LYQPENEYSGACCGYNGFPDGSYMQYIEDHARD-AGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPST 232 (971)
T ss_dssp EECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHH-TTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTC
T ss_pred EEecccccCcccccccchhHHHHHHHHHHHHHH-hCCCeeEEEecCccccccccccccCceeEEecCCCccccccCCccc
Confidence 799999999764 489999999999999 7999999999987554555544322 23444332 33321 11
Q ss_pred c--hh-----HHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHH----H-HHHHHHHHcCCe-eeEEEeecccC
Q 011205 69 W--PI-----FKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFT----A-SYLEKILSQNGS-AVLYMAHGGTN 135 (491)
Q Consensus 69 ~--~~-----f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~----~-~~~~~~l~~g~s-~n~YM~hGGTN 135 (491)
| .. +...+.+ .+++|+|+||||+|||++||+.++.++++.. + ....++|++|++ +||||||||||
T Consensus 233 ~~~~~~~~~~~d~~r~~--~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTN 310 (971)
T 1tg7_A 233 WPSGNLPTYFHTSHEQQ--SPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTN 310 (971)
T ss_dssp CCTTCSCCCHHHHHHHH--CTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBC
T ss_pred ccccccchhHHHHhhcc--CCCCCEEEEecCCcCccCCCCCccccccccChHHHHHHHHHHHHHCCCCEEEEEEeecccC
Confidence 1 11 2344555 2368999999999999999998665554333 3 234688999995 99999999999
Q ss_pred CCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHH
Q 011205 136 FGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRV 181 (491)
Q Consensus 136 fG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~ 181 (491)
||+|+|+. ++|||||+|||+|+|++|+|||.++|++
T Consensus 311 fG~~~g~~----------~~tSYDy~Apl~E~G~~t~~ky~elr~l 346 (971)
T 1tg7_A 311 WGNLGHPG----------GYTSYDYGSAISESRNITREKYSELKLL 346 (971)
T ss_dssp CTTCBCTT----------SCSBCCTTCSBCTTCCCCSHHHHHHHHH
T ss_pred CcccCCCC----------cceeeccCceeCcCCCcchhHHHHHHHH
Confidence 99998764 7899999999999999994499999954
No 26
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=92.10 E-value=0.16 Score=58.81 Aligned_cols=91 Identities=18% Similarity=0.122 Sum_probs=60.5
Q ss_pred cceEEEEEeeCCC--CCCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEE--ccc--cceeEecccccCCCcEEEEEE
Q 011205 241 FGFLLYVSEFGGK--DYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIE--RWS--NRALSLPNFRCGSNISLFVLV 314 (491)
Q Consensus 241 ~GyvlYrt~~~~~--~~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~--~~~--~~~~~lp~~~~~~~~~L~ILv 314 (491)
.|..|||++|... +....|.+.++...|.|||| |+++|... ... ...+++......+.|+|.|.|
T Consensus 118 ~~~~wYrr~f~v~~~~~~v~L~F~gvd~~a~V~vN---------G~~vg~~~~h~g~~~~~~~DIt~~l~~G~N~L~V~v 188 (1032)
T 2vzs_A 118 SVPWWYRTDLNVDDTSSRTYLDFSGVLSKADVWVN---------GTKVATKDQVNGAYTRHDLDITAQVHTGVNSVAFKV 188 (1032)
T ss_dssp SSCEEEEEEEEESCCSSEEEEEECCEESBEEEEET---------TEEEECTTTSBSTTCCEEEECTTTCCSEEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCCEEEEEECCcccceEEEEC---------CEEecccccccCcceeEEEECcHHhCCCCcEEEEEE
Confidence 4789999998752 34567888999999999999 88887532 111 223455433333579999999
Q ss_pred EeCCc---c-----ccCcCccC-CccceeeEEECC
Q 011205 315 ENMGR---V-----NYGPYMFD-EKGILSSVYLGG 340 (491)
Q Consensus 315 En~Gr---~-----NyG~~~~~-~KGI~g~V~l~g 340 (491)
.+... . .+++...+ .-||..+|.|..
T Consensus 189 ~~~~~~~~~~~g~~Dw~~~~~~~~sGI~r~V~L~~ 223 (1032)
T 2vzs_A 189 YPNDPNRDLSMGWIDWAQTPPDQNMGIVRDVLVRR 223 (1032)
T ss_dssp CCCCTTTSSSCCCTTTSCCCTTTTCEECSCEEEEE
T ss_pred eCCCCCccccCCccccccCcCCCCCCcceeeEEEE
Confidence 88643 1 12222222 469999999843
No 27
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=91.17 E-value=0.46 Score=54.90 Aligned_cols=89 Identities=20% Similarity=0.213 Sum_probs=60.8
Q ss_pred cceEEEEEeeCCCC-----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCCCcEEEEEE
Q 011205 241 FGFLLYVSEFGGKD-----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGSNISLFVLV 314 (491)
Q Consensus 241 ~GyvlYrt~~~~~~-----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~~~~L~ILv 314 (491)
.|..|||++|..+. ....|.+.++...+.|||| |+++|..... ....++|......+.|+|.|.|
T Consensus 118 ~~~g~Yrr~F~vp~~~~~~~~v~L~F~gv~~~a~V~vN---------G~~vG~~~gg~~p~~~DIT~~L~~G~N~L~V~V 188 (1023)
T 1jz7_A 118 NPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCN---------GRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMV 188 (1023)
T ss_dssp CCEEEEEEEEEECHHHHHSSEEEEEESCEESEEEEEET---------TEEEEEEECTTSCEEEECTTTCCSEEEEEEEEE
T ss_pred CcEEEEEEEEEeCchhcCCCEEEEEECCCCcceEEEEC---------CEEEccccCCCCceEEecHhhccCCCcEEEEEE
Confidence 57889999997652 3457888899999999999 9999987532 1234555433334579999988
Q ss_pred EeCCccccCcCccC-----CccceeeEEECCE
Q 011205 315 ENMGRVNYGPYMFD-----EKGILSSVYLGGK 341 (491)
Q Consensus 315 En~Gr~NyG~~~~~-----~KGI~g~V~l~g~ 341 (491)
.+-- -|.++++ .-||..+|.|-..
T Consensus 189 ~~~~---d~s~~e~qd~w~~sGI~R~V~L~~~ 217 (1023)
T 1jz7_A 189 LRWS---DGSYLEDQDMWRMSGIFRDVSLLHK 217 (1023)
T ss_dssp ESCC---GGGGGBCCSEEECCEECSCEEEEEE
T ss_pred EecC---CCCccccCCccccCCcCceEEEEEc
Confidence 7421 1222222 3799999998543
No 28
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=91.07 E-value=0.32 Score=56.24 Aligned_cols=97 Identities=15% Similarity=0.194 Sum_probs=65.5
Q ss_pred cceEEEEEeeCCCC-----CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEccc-cceeEecccccCCCcEEEEEE
Q 011205 241 FGFLLYVSEFGGKD-----YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWS-NRALSLPNFRCGSNISLFVLV 314 (491)
Q Consensus 241 ~GyvlYrt~~~~~~-----~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~-~~~~~lp~~~~~~~~~L~ILv 314 (491)
.|-.|||++|..+. ....|.+.++...+.|||| |+++|...... ...++|+.....+.|+|.|.|
T Consensus 111 n~~g~Yrr~f~vp~~~~~~~~v~L~F~gv~~~a~V~vN---------G~~vG~~~gg~~p~~~DIT~~lk~G~N~L~V~V 181 (1032)
T 3oba_A 111 NPTGVYARTFELDSKSIESFEHRLRFEGVDNCYELYVN---------GQYVGFNKGSRNGAEFDIQKYVSEGENLVVVKV 181 (1032)
T ss_dssp CCEEEEEEEEEECHHHHHHEEEEEEESCEESEEEEEET---------TEEEEEEECTTSCEEEECTTTCCSEEEEEEEEE
T ss_pred CCeEEEEEEEEECchhcCCCEEEEEECCcceeEEEEEC---------CEEEEEEeCCcccEEEEChhhccCCcEEEEEEE
Confidence 57889999997752 2356888899999999999 99999865421 234566543334679999999
Q ss_pred EeCCccccCcCccC-----CccceeeEEECCE----EecCeEEE
Q 011205 315 ENMGRVNYGPYMFD-----EKGILSSVYLGGK----VLRGWKMI 349 (491)
Q Consensus 315 En~Gr~NyG~~~~~-----~KGI~g~V~l~g~----~l~~W~~~ 349 (491)
.+.-. |.++++ .-||..+|.|-.. -+..+.+.
T Consensus 182 ~~~sd---~s~~edqd~w~~sGI~R~V~L~~~p~~~~I~d~~v~ 222 (1032)
T 3oba_A 182 FKWSD---STYIEDQDQWWLSGIYRDVSLLKLPKKAHIEDVRVT 222 (1032)
T ss_dssp ESCCG---GGGGBCCSEEECCEECSCEEEEEEESSEEEEEEEEE
T ss_pred ECCCC---CCccCCCCcCccCccceEEEEEEECCceEEeEEEEE
Confidence 76421 222221 3699999998432 23455554
No 29
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=90.78 E-value=0.4 Score=55.44 Aligned_cols=67 Identities=27% Similarity=0.313 Sum_probs=48.4
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCC-ceEEEEECCeeceeccCCCCCe--eeEecCCccccccCcEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGW-GKGIAFVNEFNLGRFWPSFGPQ--CDLYVPAPILRHGENLVVIF 460 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~-~KG~v~VNG~nlGRYW~~~GPQ--~tlYVP~~~Lk~G~N~ivvf 460 (491)
.+..|||.+|++ ... ...++|.+.|- ....|||||+-+|.+=.+.|-- .++=|.. .||+|+|+|.|-
T Consensus 118 ~~~~wYrr~f~v-~~~-~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h~g~~~~~~~DIt~-~l~~G~N~L~V~ 187 (1032)
T 2vzs_A 118 SVPWWYRTDLNV-DDT-SSRTYLDFSGVLSKADVWVNGTKVATKDQVNGAYTRHDLDITA-QVHTGVNSVAFK 187 (1032)
T ss_dssp SSCEEEEEEEEE-SCC-SSEEEEEECCEESBEEEEETTEEEECTTTSBSTTCCEEEECTT-TCCSEEEEEEEE
T ss_pred CccEEEEEEEEE-eCC-CCEEEEEECCcccceEEEECCEEecccccccCcceeEEEECcH-HhCCCCcEEEEE
Confidence 457999999999 322 24689999996 5899999999998752123321 2333654 789899999984
No 30
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=90.39 E-value=0.44 Score=55.05 Aligned_cols=89 Identities=17% Similarity=0.150 Sum_probs=60.5
Q ss_pred cceEEEEEeeCCCC-------CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcc-ccceeEecccccCCCcEEEE
Q 011205 241 FGFLLYVSEFGGKD-------YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERW-SNRALSLPNFRCGSNISLFV 312 (491)
Q Consensus 241 ~GyvlYrt~~~~~~-------~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~-~~~~~~lp~~~~~~~~~L~I 312 (491)
.+..|||++|..+. ....|.+.++...+.|||| |+++|..... ....++|......+.|+|.|
T Consensus 117 ~~~~wYrr~F~vp~~~~~~g~~rv~L~F~gv~~~a~V~vN---------G~~VG~~~gg~~p~~~DIT~~Lk~G~N~L~V 187 (1024)
T 1yq2_A 117 NPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVN---------GQEIGVGSGSRLAQEFDVSDALRAGSNLLVV 187 (1024)
T ss_dssp CCEEEEEEEEEECGGGGSTTEEEEEEEESCEESCEEEEET---------TEEEEEECCTTSCEEEECTTTCCSEEEEEEE
T ss_pred CceEEEEEEeEECchHhcCCCceEEEEECCCCceEEEEEC---------CEEEEEEeCCccceEEecHHhccCCCcEEEE
Confidence 57789999997642 2356778899999999999 9999987532 12345555333346799999
Q ss_pred EEEeCCccccCcCccC-----CccceeeEEECCE
Q 011205 313 LVENMGRVNYGPYMFD-----EKGILSSVYLGGK 341 (491)
Q Consensus 313 LvEn~Gr~NyG~~~~~-----~KGI~g~V~l~g~ 341 (491)
.|.+-- -|.++++ .-||..+|.|-..
T Consensus 188 ~V~~~~---d~~~~e~~d~w~~~GI~R~V~L~~~ 218 (1024)
T 1yq2_A 188 RVHQWS---AASYLEDQDQWWLPGIFRDVTLQAR 218 (1024)
T ss_dssp EEESSC---GGGGGBCCSEEECCEECSCEEEEEE
T ss_pred EEEecC---CCCccccCCccccCCcceEEEEEEc
Confidence 997421 1222221 4799999998554
No 31
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=88.94 E-value=0.96 Score=51.60 Aligned_cols=64 Identities=16% Similarity=0.363 Sum_probs=45.3
Q ss_pred CceEEEEEEeeCCCCCccceEEEeCC-Cc-eEEEEECCeeceeccCCCCC----eeeEecCCccccc-cCcEEEEE
Q 011205 392 EPAFYVGRFSIDKVNQVKDTYLSFSG-WG-KGIAFVNEFNLGRFWPSFGP----QCDLYVPAPILRH-GENLVVIF 460 (491)
Q Consensus 392 ~p~~y~~~f~i~~~~~~~Dt~Ld~~g-~~-KG~v~VNG~nlGRYW~~~GP----Q~tlYVP~~~Lk~-G~N~ivvf 460 (491)
+..|||++|+.+..+ .-++|.+.| .. --.|||||+-||. |+-.|= ..++-+|. |+. ++|.|.|+
T Consensus 711 G~~wYRG~F~a~~~~--~~v~L~~~GG~af~~sVWLNG~flGs-~~g~g~~~~~~~~~~lP~--L~~g~~NVLtV~ 781 (1003)
T 3og2_A 711 GTLLFRGRFTARTAR--QQLFLSTQGGSAFASSVWLNDRFIGS-FTGFDAASAANSSYTLDR--LVRGRRYILTVV 781 (1003)
T ss_dssp SCEEEEEEEECSSSS--EEEEEEEECSTTCCEEEEETTEEEEE-ECCCTTCSEEEEEEEECS--CCTTCEEEEEEE
T ss_pred CCEEEeeEEECCCCc--eEEEEEEccccccccEEEECCEEecc-ccCCCcccccceEEECCc--ccCCCceEEEEE
Confidence 678999999998543 356788765 33 5699999999998 432332 24455875 775 57888775
No 32
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=88.73 E-value=0.62 Score=52.71 Aligned_cols=65 Identities=12% Similarity=0.163 Sum_probs=47.8
Q ss_pred eEEEEEeeCCC-----CCCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEccc-cceeEecccccCCCcEEEEEEEe
Q 011205 243 FLLYVSEFGGK-----DYGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWS-NRALSLPNFRCGSNISLFVLVEN 316 (491)
Q Consensus 243 yvlYrt~~~~~-----~~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~-~~~~~lp~~~~~~~~~L~ILvEn 316 (491)
-.|||++|..+ +....|.+.++...|.|||| |+.+|...... ...++++.....+.|+|.|.|.|
T Consensus 65 ~~~Yr~~f~~p~~~~~~~~~~L~f~gv~~~a~V~vN---------G~~vg~~~~~~~~~~~dIt~~l~~G~N~L~V~v~~ 135 (848)
T 2je8_A 65 DWEYRTSFIVSEEQLNRDGIQLIFEGLDTYADVYLN---------GSLLLKADNMFVGYTLPVKSVLRKGENHLYIYFHS 135 (848)
T ss_dssp CEEEEEEEEECHHHHTSSEEEEEESCCBSEEEEEET---------TEEEEEECBTTCCEEEECGGGCCSEEEEEEEEEEC
T ss_pred CEEEEEEEEcChhhcCCCeEEEEECCCCceeEEEEC---------CEEeccccCCCCCEEEcChHhhcCCCcEEEEEEeC
Confidence 45999999764 23467888999999999999 99999875421 23455554333467999999986
No 33
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=86.28 E-value=3 Score=45.86 Aligned_cols=144 Identities=12% Similarity=0.167 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhhcCCceEEEeccCCccc---cccCCCcCCCeeeeecCCCCCCCCchh--HH--hHHHhcCCCCCCCcc
Q 011205 16 EYLHHLVTLARAHLGKDIILYTTDGGTRE---TLLKGTIRGDAVFAAVDFSTGAEPWPI--FK--LQKQFNAPGKSPPLS 88 (491)
Q Consensus 16 ~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~---~~~~G~~~~~~v~~~~~f~~~~~~~~~--f~--~~~~~~~~~~~P~~~ 88 (491)
+|++++.+++|+ ..-+.|++|+-.+... ....+ ...|+.+.+.++...++... |. +.+.. + +.+|+++
T Consensus 231 ~~~~~~~d~iR~-~~P~~pvt~N~~~~~~~~D~~~~a--~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~-~-~g~p~~~ 305 (675)
T 3tty_A 231 ECFKMERDELKR-WTPDIPVTTNLMGFYPELDYFKWA--KEMDVVSWDNYPSMDTPFSFTAMAHNLMRGL-K-SGQPFML 305 (675)
T ss_dssp HHHHHHHHHHHH-HCTTSCEECEECTTCTTSCHHHHH--TTCSSCEEECCCCTTSCHHHHHHHHHHHHHT-T-TTCCEEE
T ss_pred HHHHHHHHHHHH-hCCCCCEEEccccccCCcCHHHHh--hcCCEEEECCCCCcCCCHHHHHHHHHHHHhh-c-CCCCeEE
Confidence 788889999999 6888898887532100 01111 12357776666543322211 21 22333 2 2479999
Q ss_pred cccccccccccCCCCcCCCHHHHHHHHHHHHHcCCe-eeEEEeecccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCC
Q 011205 89 SEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGS-AVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKES 167 (491)
Q Consensus 89 ~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~ 167 (491)
||..+| ...|........+..+....-..++.|+. ++||-++-..+ |+. .| -.|.|+=+
T Consensus 306 mE~~~~-~~~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~~-----g~E------~~--------h~g~~~~~ 365 (675)
T 3tty_A 306 MEQTPG-VQNWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVG-----ACE------KY--------HGAVIEHV 365 (675)
T ss_dssp EECCSS-CCTTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCCS-----GGG------TT--------SCCSBCTT
T ss_pred ecCCCC-CCCCcCCCCCCCccHHHHHHHHHHhcccCeEeeeeccCCCC-----chh------hh--------hccccCCC
Confidence 999997 45686544444456666666678999996 78887654211 111 01 12455556
Q ss_pred CCCChHHHHHHHHHHHh
Q 011205 168 GDVDNPKFKAIRRVVEK 184 (491)
Q Consensus 168 G~~t~pKy~~lr~~i~~ 184 (491)
|....+.|.+++++-++
T Consensus 366 g~~~~r~~~ev~~~~~~ 382 (675)
T 3tty_A 366 GHEHTRVFRECAELGKE 382 (675)
T ss_dssp CSSCSHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHH
Confidence 76543479998876443
No 34
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=77.25 E-value=3.5 Score=47.15 Aligned_cols=66 Identities=26% Similarity=0.378 Sum_probs=46.1
Q ss_pred CCceEEEEEEeeCCCCCc-cceEEEeCCCceEEEEECCeeceeccCCCC-CeeeEecC---Ccccccc-CcEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQV-KDTYLSFSGWGKGIAFVNEFNLGRFWPSFG-PQCDLYVP---APILRHG-ENLVVI 459 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~-~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~G-PQ~tlYVP---~~~Lk~G-~N~ivv 459 (491)
.+..+||.+|+++.. + ....|-++.-+.=.+||||..+|+ .|... +...+|.- .++|++| +|.|.|
T Consensus 21 ~~~~~fRk~f~~~~~--~~~~a~l~i~a~g~y~~~iNG~~vg~-~p~~~~~~~~~y~~~Dvt~~L~~G~~N~i~v 92 (956)
T 2okx_A 21 NEWRCFRGSFDAPAS--VEGPAMLHITADSRYVLFVNGEQVGR-GPVRSWPKEQFYDSYDIGGQLRPGVRNTIAV 92 (956)
T ss_dssp TEEEEEEEEEECCSC--CSSCCEEEEEEESEEEEEETTEEEEE-ECCCCBTTEEEEEEEECTTTCCTTSEEEEEE
T ss_pred CccceeEEEEECCCC--ccCceEEEEEecCcEEEEECCEECCC-CCCccccccccceEEechhhcCCCCCcEEEE
Confidence 356899999999853 3 355666666677799999999998 32211 33333422 4689999 999887
No 35
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.55 E-value=9.1 Score=42.34 Aligned_cols=55 Identities=11% Similarity=-0.010 Sum_probs=42.9
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCCCceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEEE
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSGWGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFE 461 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g~~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvfE 461 (491)
.+..+||.+|+++.+ .-|-.++.|.=.++|||..+|.| | .++ .|++|+|.|-|.=
T Consensus 56 ~~~~~~rk~f~~~~~-----a~l~i~a~G~ye~~iNG~~vg~y-----~-~r~-----~L~~G~N~i~v~l 110 (739)
T 3cih_A 56 YVVVEFSKVLNLSEP-----EEVFIAAEGTYNVKLDGKLQFGM-----P-ETL-----LLPAGKHSLNIKV 110 (739)
T ss_dssp CSEEEEEEEEEESSC-----EEEEEEEESEEEEEETTEECSSC-----C-SEE-----EECSEEEEEEEEE
T ss_pred CcceeEEEEEEcCCC-----cEEEEEEcCcEEEEECCEEccCC-----C-Cce-----EecCCceEEEEEE
Confidence 467899999999753 44566688999999999999976 2 344 3788999988753
No 36
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=63.41 E-value=4.7 Score=40.46 Aligned_cols=161 Identities=15% Similarity=0.139 Sum_probs=82.6
Q ss_pred ccccccCCCCCC------------CHHHHHHHHHHHHhhcCCceEEEeccCCccc--------------cccCCCcCCCe
Q 011205 2 VQIENEFGSYGD------------DKEYLHHLVTLARAHLGKDIILYTTDGGTRE--------------TLLKGTIRGDA 55 (491)
Q Consensus 2 vQvENEYg~y~~------------d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~--------------~~~~G~~~~~~ 55 (491)
.+|-||...... +.+|++..-+.||+ +--+.+||.||-.... ....|. + .|
T Consensus 150 WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~-~dP~a~L~~Ndyn~~~~~~k~~~~~~~v~~l~~~G~-~-id 226 (347)
T 1xyz_A 150 WDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYARE-ADPDALLFYNDYNIEDLGPKSNAVFNMIKSMKERGV-P-ID 226 (347)
T ss_dssp EEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHH-HCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHTTC-C-CC
T ss_pred EEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHh-hCCCCEEEeccCccccccchHHHHHHHHHHHHHCCC-C-cc
Confidence 578899875321 25899999999999 5678899999864311 011232 1 11
Q ss_pred eeeecCCCCC---CCCc---hh-HHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHH----HHHcCCe
Q 011205 56 VFAAVDFSTG---AEPW---PI-FKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEK----ILSQNGS 124 (491)
Q Consensus 56 v~~~~~f~~~---~~~~---~~-f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~----~l~~g~s 124 (491)
. +++.+. ..+. .. -..+++|... ..|.++||+-...-. ... .....+..+..+++ +++...
T Consensus 227 g---iG~Q~H~~~~~~~~~~~~~~~~l~~~a~~-G~pi~iTEldi~~~~-~~~--~~~~~~~Qa~~y~~~~~~~~~~~~- 298 (347)
T 1xyz_A 227 G---VGFQCHFINGMSPEYLASIDQNIKRYAEI-GVIVSFTEIDIRIPQ-SEN--PATAFQVQANNYKELMKICLANPN- 298 (347)
T ss_dssp E---EEECCEEESSCCHHHHHHHHHHHHHHHHT-TCEEEEEEEEEEEET-TSC--HHHHHHHHHHHHHHHHHHHHHCTT-
T ss_pred e---EEEeeecCCCCCchhHHHHHHHHHHHHhc-CCceEEEeccccCCC-CCC--chhHHHHHHHHHHHHHHHHHhcCC-
Confidence 2 222211 1121 12 2234555433 569999999543211 000 00001223333443 344322
Q ss_pred eeEEEeecccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHHhh
Q 011205 125 AVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKF 185 (491)
Q Consensus 125 ~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~~~ 185 (491)
..|=|-||+.-+..+.. +.+ | ..++-.++++++++. |-|.+++++|+.|
T Consensus 299 -----v~git~Wg~~D~~sW~~--~~~-~---~~~~~llfd~d~~pK-pAy~~l~~~l~~~ 347 (347)
T 1xyz_A 299 -----CNTFVMWGFTDKYTWIP--GTF-P---GYGNPLIYDSNYNPK-PAYNAIKEALMGY 347 (347)
T ss_dssp -----EEEEEESCSBTTSCSHH--HHS-T---TEECCSSBCTTSCBC-HHHHHHHHHHC--
T ss_pred -----eeEEEEecCccCCcccc--CcC-C---CCCCceeECCCCCCC-HHHHHHHHHHhhC
Confidence 23445566654322100 001 1 123455789999999 5999999998654
No 37
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=59.51 E-value=14 Score=36.97 Aligned_cols=115 Identities=11% Similarity=0.156 Sum_probs=62.3
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHhhcCCceEEEeccCCccccccCCCcCCCeeeeecCCCCCCCCchhH-HhHHHhc
Q 011205 1 MVQIENEFGSYGDDKEYLHHLVTLARAHLGKDIILYTTDGGTRETLLKGTIRGDAVFAAVDFSTGAEPWPIF-KLQKQFN 79 (491)
Q Consensus 1 mvQvENEYg~y~~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~~~G~~~~~~v~~~~~f~~~~~~~~~f-~~~~~~~ 79 (491)
|+||=||.-......+|+..|.+.+|+... .-+.|.+|.+...... -.+..|+.+...+.+- ..|... ..++...
T Consensus 168 ~~~IGNE~~~~~~~~~~~~~Li~~vR~~~~-g~VTya~~~~~~~~~~--lw~~~DvIgin~Y~~~-~~w~~~~~~l~~~~ 243 (343)
T 3civ_A 168 MFCVGCEMTTAEPHEAMWRETIARVRTEYD-GLVTYNCNHGREEHVR--FWDAVDLISSSAYYPI-DRWRDRVPVLREVA 243 (343)
T ss_dssp EEEEEESCTTTTTCHHHHHHHHHHHHHHCC-SEEEEEEETTCTTTCS--CGGGSSEEEEECCCCG-GGHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCchHHHHHHHHHHHHhhCC-CCEEEEecCccccccc--ccccCCEEEEeccCCc-hhHHHHHHHHHHHH
Confidence 578889987765578899999999999543 3233555543111100 0133456665544321 112211 1121111
Q ss_pred CCCCCCCcccccccccccccCCC--------CcCCCHHHHHHHHHHHHHc
Q 011205 80 APGKSPPLSSEFYTGWLTHWGEK--------IAKTDADFTASYLEKILSQ 121 (491)
Q Consensus 80 ~~~~~P~~~~E~~~Gwfd~WG~~--------~~~~~~~~~~~~~~~~l~~ 121 (491)
..-++|.+++||.... ..|.. ...++.+..+..++.++..
T Consensus 244 ~~~~KPIiitE~G~~s--~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~~~ 291 (343)
T 3civ_A 244 EAHEKPLFFMEVGCPS--RSGSGACPWDYRHPGAVCLDEQARFYEAMFAA 291 (343)
T ss_dssp HHHTCCEEEEEECCCS--BTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHH
T ss_pred HHhCCCEEEEeeCCCC--CCCCCCCCCcccCCCCCCHHHHHHHHHHHHHH
Confidence 0115799999996555 44421 1234566667777777654
No 38
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=58.40 E-value=67 Score=36.50 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=65.1
Q ss_pred cceEEEEEeeCCCC---CCceeEecCcCcEEEEEEcCCCCCCCCCCeEEEEEEcccc------ceeEecccccCC-CcEE
Q 011205 241 FGFLLYVSEFGGKD---YGSSLLISKVHDRAQVFISCPTEDNSGRPTYVGTIERWSN------RALSLPNFRCGS-NISL 310 (491)
Q Consensus 241 ~GyvlYrt~~~~~~---~~~~L~i~~~~D~a~Vfvn~~~~~~~~~g~~vG~~~~~~~------~~~~lp~~~~~~-~~~L 310 (491)
.+..+||.+|..+. ....|.|. ......+||| |+.||.-..++. .++++......+ .|+|
T Consensus 21 ~~~~~fRk~f~~~~~~~~~a~l~i~-a~g~y~~~iN---------G~~vg~~p~~~~~~~~~y~~~Dvt~~L~~G~~N~i 90 (956)
T 2okx_A 21 NEWRCFRGSFDAPASVEGPAMLHIT-ADSRYVLFVN---------GEQVGRGPVRSWPKEQFYDSYDIGGQLRPGVRNTI 90 (956)
T ss_dssp TEEEEEEEEEECCSCCSSCCEEEEE-EESEEEEEET---------TEEEEEECCCCBTTEEEEEEEECTTTCCTTSEEEE
T ss_pred CccceeEEEEECCCCccCceEEEEE-ecCcEEEEEC---------CEECCCCCCccccccccceEEechhhcCCCCCcEE
Confidence 57789999997753 23456654 3445589999 888887433221 234554333446 8999
Q ss_pred EEEEEeCCccccCcCccCCccceeeEEECCEE----ecCeEEEeecC
Q 011205 311 FVLVENMGRVNYGPYMFDEKGILSSVYLGGKV----LRGWKMIPVPF 353 (491)
Q Consensus 311 ~ILvEn~Gr~NyG~~~~~~KGI~g~V~l~g~~----l~~W~~~~l~l 353 (491)
.++|=+.|+.+|.. +..+-|++....-+|.. -..|+...-|.
T Consensus 91 ~v~~~~~g~~~~~~-~~~~~~l~~~l~~dg~~~i~tD~sWk~~~~p~ 136 (956)
T 2okx_A 91 AVLVLHFGVSNFYY-LRGRGGLIAEIEADGRTLAATDAAWRTERLGG 136 (956)
T ss_dssp EEEEEECCSCBTTB-CCCCCEEEEEEEETTEEEEECSTTSEEEECTT
T ss_pred EEEEEecCcccccc-cCCCceEEEEEecCCcEEEecCCCceeecCCc
Confidence 99999999887653 33456676544445542 25799866443
No 39
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=52.97 E-value=34 Score=37.05 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=41.9
Q ss_pred CCceEEEEEEeeCCCCCccceEEEeCC-CceEEEEECCeeceeccCCCCCeeeEecCCccccccCcEEEEEEec
Q 011205 391 KEPAFYVGRFSIDKVNQVKDTYLSFSG-WGKGIAFVNEFNLGRFWPSFGPQCDLYVPAPILRHGENLVVIFELE 463 (491)
Q Consensus 391 ~~p~~y~~~f~i~~~~~~~Dt~Ld~~g-~~KG~v~VNG~nlGRYW~~~GPQ~tlYVP~~~Lk~G~N~ivvfE~~ 463 (491)
.+-.||++++..+. ...-|...+ --+.+|||||.-+|.+.- .--+.++-+|. .+|.|+|-|+-+.
T Consensus 382 ~gy~lY~t~i~~~~----~~~~L~i~~~~D~a~Vfvng~~~G~~~~-~~~~~~~~~~~---~~~~~~L~iLven 447 (612)
T 3d3a_A 382 WGSILYRTSLSASD----KEQTLLITEAHDWAQVFLNGKKLATLSR-LKGEGVVKLPP---LKEGDRLDILVEA 447 (612)
T ss_dssp SSEEEEEEEECCBS----SCEEEEEEEEESEEEEEETTEEEEEEET-TTTCCEEEECC---BCTTEEEEEEEEC
T ss_pred CCeEEEEEEecCCC----CCceEEecCCCeEEEEEECCEEEEEEEc-ccCCceEEeec---CCCCcEEEEEEEe
Confidence 46799999997732 133454333 257999999999999763 22234454542 2477888876543
No 40
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=52.02 E-value=54 Score=31.89 Aligned_cols=147 Identities=12% Similarity=0.088 Sum_probs=84.5
Q ss_pred ccccccCCCCC-----------CCHHHHHHHHHHHHhhcCCceEEEeccCCcc--c---------c----ccCCCcCCCe
Q 011205 2 VQIENEFGSYG-----------DDKEYLHHLVTLARAHLGKDIILYTTDGGTR--E---------T----LLKGTIRGDA 55 (491)
Q Consensus 2 vQvENEYg~y~-----------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~--~---------~----~~~G~~~~~~ 55 (491)
.+|-||..... .+.+|++..-+.||+ .--+.+||.+|-... . . ...|. + .|
T Consensus 126 WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~-~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~-~-iD 202 (303)
T 1i1w_A 126 WDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARA-ADPNAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGV-P-ID 202 (303)
T ss_dssp EEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHH-HCTTSEEEEEESSCCCSSSHHHHHHHHHHHHHHHTTC-C-CC
T ss_pred EEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHH-HCCCCeEEeccccccCCChHHHHHHHHHHHHHHHCCC-c-cc
Confidence 57889986531 135799999999999 567899999875311 0 0 11232 1 11
Q ss_pred eeeecCCCCC---CCCchhHHhHHHhcCCCCC-CCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEee
Q 011205 56 VFAAVDFSTG---AEPWPIFKLQKQFNAPGKS-PPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAH 131 (491)
Q Consensus 56 v~~~~~f~~~---~~~~~~f~~~~~~~~~~~~-P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~h 131 (491)
.+ ++.+. ..+...-..+++|... .. |.++||+-.. ...++.+...+...++...-.+
T Consensus 203 gi---G~Q~H~~~~~~~~~~~~l~~~a~~-G~~pi~iTEldi~----------~~qa~~y~~~~~~~~~~~~v~g----- 263 (303)
T 1i1w_A 203 GI---GSQTHLSAGQGASVLQALPLLASA-GTPEVAITELDVA----------GASSTDYVNVVNACLNVSSCVG----- 263 (303)
T ss_dssp EE---EECCEECTTTHHHHHHHHHHHHTT-CCSEEEEEEEEET----------TCCHHHHHHHHHHHHHCTTEEE-----
T ss_pred EE---EeccccCCCCHHHHHHHHHHHHHC-CCCeEEEEeCCcc----------chHHHHHHHHHHHHHhCCCceE-----
Confidence 22 23221 1222223345666433 45 9999999532 1345666666666666543233
Q ss_pred cccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHH
Q 011205 132 GGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVE 183 (491)
Q Consensus 132 GGTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~ 183 (491)
=|-||+.-+.. ..+. ++-.++++++++. |-|.+++++|+
T Consensus 264 -it~Wg~~D~~s-------W~~~----~~~~L~d~~~~pK-pAy~a~~~~l~ 302 (303)
T 1i1w_A 264 -ITVWGVADPDS-------WRAS----TTPLLFDGNFNPK-PAYNAIVQNLQ 302 (303)
T ss_dssp -EEESCSBGGGS-------TTGG----GCCSSBCTTSCBC-HHHHHHHHHHC
T ss_pred -EEEEcCCCCCC-------cCCC----CcceeECCCCCCC-HHHHHHHHHHh
Confidence 33455543222 1111 2345789999999 59999998875
No 41
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=50.09 E-value=41 Score=33.03 Aligned_cols=149 Identities=14% Similarity=0.104 Sum_probs=86.1
Q ss_pred ccccccCCCCC------------CCHHHHHHHHHHHHhhcCCceEEEeccCCccc-----------c----ccCCCcCCC
Q 011205 2 VQIENEFGSYG------------DDKEYLHHLVTLARAHLGKDIILYTTDGGTRE-----------T----LLKGTIRGD 54 (491)
Q Consensus 2 vQvENEYg~y~------------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~-----------~----~~~G~~~~~ 54 (491)
.+|-||...-. .+.+|++..-+.||+ .--++.||.+|-.... . ...|. + .
T Consensus 123 wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~-~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~-~-i 199 (313)
T 1v0l_A 123 WDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARA-ADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGV-P-I 199 (313)
T ss_dssp EEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHH-HCTTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHTC-C-C
T ss_pred EeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHh-hCCCCEEEEeccccccCChHHHHHHHHHHHHHHHCCC-C-c
Confidence 46778876311 136799999999999 5678899988854211 0 11232 1 1
Q ss_pred eeeeecCCCC----C-CCCchhHHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEE
Q 011205 55 AVFAAVDFST----G-AEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYM 129 (491)
Q Consensus 55 ~v~~~~~f~~----~-~~~~~~f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM 129 (491)
|.+ ++.+ + ..+...-..+++|... ..|.++||+-.. ...++.+...++..++...-.+
T Consensus 200 DgI---G~Q~H~~~~~~~~~~~~~~l~~~a~~-G~pv~iTEldi~----------~~qa~~y~~~~~~~~~~~~v~g--- 262 (313)
T 1v0l_A 200 DCV---GFQSHFNSGSPYNSNFRTTLQNFAAL-GVDVAITELDIQ----------GAPASTYANVTNDCLAVSRCLG--- 262 (313)
T ss_dssp CEE---EECCEEBTTBCCCTTHHHHHHHHHTT-TCEEEEEEEEET----------TCCHHHHHHHHHHHHTCTTEEE---
T ss_pred ceE---EEeEEccCCCCCHHHHHHHHHHHHhc-CCeEEEEeCCcc----------HHHHHHHHHHHHHHHhcCCceE---
Confidence 122 2221 1 1123333345666433 569999999532 2345666666666666543233
Q ss_pred eecccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHHhh
Q 011205 130 AHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEKF 185 (491)
Q Consensus 130 ~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~~~ 185 (491)
=|-||+..+.. ..+ .++-.+++++++++ |-|.+++++|+.-
T Consensus 263 ---it~Wg~~D~~s-------W~~----~~~~~L~d~d~~pK-pAy~~~~~~l~~~ 303 (313)
T 1v0l_A 263 ---ITVWGVRDSDS-------WRS----EQTPLLFNNDGSKK-AAYTAVLDALNGG 303 (313)
T ss_dssp ---EEESCSBGGGS-------TTG----GGCCSSBCTTSCBC-HHHHHHHHHHTTC
T ss_pred ---EEEECCCCCCC-------ccC----CCCceeECCCCCCC-HHHHHHHHHHhcC
Confidence 34456553321 111 23346789999999 5999999998763
No 42
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=48.21 E-value=21 Score=34.26 Aligned_cols=36 Identities=19% Similarity=0.083 Sum_probs=22.9
Q ss_pred CccccccCCCCCC-----CHHHHHHHHHHHHhhcCCceEEEe
Q 011205 1 MVQIENEFGSYGD-----DKEYLHHLVTLARAHLGKDIILYT 37 (491)
Q Consensus 1 mvQvENEYg~y~~-----d~~Ym~~L~~~~~~~~Gi~vpl~t 37 (491)
+++|=||-..... =.+|++.+.+.+|+ .+-+.+++.
T Consensus 122 ~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~-~dp~~~i~v 162 (302)
T 1bqc_A 122 LINIGNEPYGNDSATVAAWATDTSAAIQRLRA-AGFEHTLVV 162 (302)
T ss_dssp EEECSSSCCCSCHHHHTTHHHHHHHHHHHHHH-TTCCSCEEE
T ss_pred EEEeCCCCCCCCCcchhhHHHHHHHHHHHHHh-cCCCcEEEE
Confidence 3577788643211 14688888898998 666655443
No 43
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=47.93 E-value=12 Score=36.65 Aligned_cols=162 Identities=14% Similarity=0.065 Sum_probs=82.4
Q ss_pred CccccccCCCCC-C-----------CHHHHHHHHHHHHhhcCCceEEEeccCCccc-------c-------ccCCCcCCC
Q 011205 1 MVQIENEFGSYG-D-----------DKEYLHHLVTLARAHLGKDIILYTTDGGTRE-------T-------LLKGTIRGD 54 (491)
Q Consensus 1 mvQvENEYg~y~-~-----------d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~-------~-------~~~G~~~~~ 54 (491)
+.||-||..... . +.+|++..-+.||+ .--+.+||.+|-.... . ...|. + .
T Consensus 121 ~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~-~dP~a~l~~ndy~~~~~~~k~~~~~~~v~~l~~~G~-~-i 197 (315)
T 3cui_A 121 SWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARA-ADPTAKLCINDYNVEGINAKSNSLYDLVKDFKARGV-P-L 197 (315)
T ss_dssp EEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHH-HCSSSEEEEEESSCSSSSHHHHHHHHHHHHHHHHTC-C-C
T ss_pred EEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHh-hCCCCEEEECCccccCcchHHHHHHHHHHHHHHCCC-c-c
Confidence 357889987542 0 25899999999998 5667889988753210 0 11232 1 1
Q ss_pred eeeeecC-CCCCCCCchhHHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHH----HcCCeeeEEE
Q 011205 55 AVFAAVD-FSTGAEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKIL----SQNGSAVLYM 129 (491)
Q Consensus 55 ~v~~~~~-f~~~~~~~~~f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l----~~g~s~n~YM 129 (491)
|.++.-. +.....+...-..++++... +.|.++||+-... .+.. ...+.+..+..+++++ +...-.+
T Consensus 198 DgiG~Q~H~~~~~~~~~~~~~l~~~a~~-g~pv~iTE~di~~--~~~~--~~~~~~~qa~~~~~~~~~~~~~~~v~g--- 269 (315)
T 3cui_A 198 DCVGFQSHLIVGQVPGDFRQNLQRFADL-GVDVRITELDIRM--RTPS--DATKLATQAADYKKVVQACMQVTRCQG--- 269 (315)
T ss_dssp CEEEECCEEETTCCCTTHHHHHHHHHTT-TCEEEEEEEEEEE--ESSC--CHHHHHHHHHHHHHHHHHHHTSTTEEE---
T ss_pred cEEEeeeecCCCCCHHHHHHHHHHHHhc-CCceEEEeccccc--CCCC--ChHHHHHHHHHHHHHHHHHHhCCCceE---
Confidence 2222100 01111233333345666433 5799999996442 1111 0001123333444443 3322123
Q ss_pred eecccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHH
Q 011205 130 AHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVE 183 (491)
Q Consensus 130 ~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~ 183 (491)
=|-||+.-+..+.. +.+ |. .++-.++++++++. |-|.+++++|+
T Consensus 270 ---it~Wg~~D~~sW~~--~~~-~~---~~~~~Lfd~d~~pK-pA~~~~~~~l~ 313 (315)
T 3cui_A 270 ---VTVWGITDKYSWVP--DVF-PG---EGAALVWDASYAKK-PAYAAVMEAFG 313 (315)
T ss_dssp ---EEESCSBTTTCSHH--HHS-TT---EECCSSBCTTSCBC-HHHHHHHHHHT
T ss_pred ---EEEEeCCCCCccCC--CCC-CC---CCCceeECCCCCCC-HHHHHHHHHHc
Confidence 34455543322100 001 11 23456789999999 59999998874
No 44
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=40.87 E-value=1.1e+02 Score=29.76 Aligned_cols=149 Identities=13% Similarity=0.076 Sum_probs=82.9
Q ss_pred ccccccCCCCC-----------CCHHHHHHHHHHHHhhcCCceEEEeccCCccc-----------c----ccCCCcCCCe
Q 011205 2 VQIENEFGSYG-----------DDKEYLHHLVTLARAHLGKDIILYTTDGGTRE-----------T----LLKGTIRGDA 55 (491)
Q Consensus 2 vQvENEYg~y~-----------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~-----------~----~~~G~~~~~~ 55 (491)
.+|-||..+.. -+.+|++..-+.||+ .--+..||.+|-.... . ...|. + .|
T Consensus 125 Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~-~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~-~-iD 201 (303)
T 1ta3_B 125 WDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARA-ADPDAKLYINDYNLDSASYAKTQAMASYVKKWLAEGV-P-ID 201 (303)
T ss_dssp EEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHH-HCTTSEEEEEESCCCCTTSHHHHHHHHHHHHHHHTTC-C-CC
T ss_pred EEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHH-HCCCCEEEeccccccCCchHHHHHHHHHHHHHHHCCC-C-cc
Confidence 46788875421 136899999999999 5678899988754210 0 11232 1 11
Q ss_pred eeee-cCCCCCCCC-chhHHhHHHhcCCCCC-CCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeec
Q 011205 56 VFAA-VDFSTGAEP-WPIFKLQKQFNAPGKS-PPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHG 132 (491)
Q Consensus 56 v~~~-~~f~~~~~~-~~~f~~~~~~~~~~~~-P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hG 132 (491)
.++. .-+..+..+ ...-..+++|... .. |.++||+-.. ...++.+...+...++...-.+
T Consensus 202 giG~Q~H~~~~~~~~~~~~~~l~~~a~~-G~~pi~iTEldi~----------~~qa~~y~~~~~~~~~~~~v~g------ 264 (303)
T 1ta3_B 202 GIGSQAHYSSSHWSSTEAAGALSSLANT-GVSEVAITELDIA----------GAASSDYLNLLNACLNEQKCVG------ 264 (303)
T ss_dssp EEEECCEECTTCCCGGGHHHHHHHHHTT-CCSEEEEEEEEET----------TCCHHHHHHHHHHHHTCTTEEE------
T ss_pred eEEEeeecCCCCCCHHHHHHHHHHHHHC-CCCeEEEeeCCcC----------hhHHHHHHHHHHHHHhCCCceE------
Confidence 2221 011111112 2223345666433 45 9999999532 1345666666665565433233
Q ss_pred ccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHH
Q 011205 133 GTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVV 182 (491)
Q Consensus 133 GTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i 182 (491)
=|-||+.-+..+ .+. ++-.+.+++++++ |-|.+++++|
T Consensus 265 it~Wg~~D~~sW-------~~~----~~~~l~d~~~~pK-pAy~a~~~~l 302 (303)
T 1ta3_B 265 ITVWGVSDKDSW-------RAS----DSPLLFDGNYQPK-DAYNAIVNAL 302 (303)
T ss_dssp EEESCSBGGGST-------TGG----GCCSSBCTTSCBC-HHHHHHHHHH
T ss_pred EEEecCCcCCCc-------cCC----CcceeECCCCCCC-HHHHHHHHHh
Confidence 344565533221 111 2345789999999 5999999876
No 45
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=34.05 E-value=56 Score=31.62 Aligned_cols=151 Identities=13% Similarity=0.119 Sum_probs=76.9
Q ss_pred ccccccCCCCC-------------CCHHHHHHHHHHHHhhcCCceEEEeccCCccc-------c--c-----cCCCcCCC
Q 011205 2 VQIENEFGSYG-------------DDKEYLHHLVTLARAHLGKDIILYTTDGGTRE-------T--L-----LKGTIRGD 54 (491)
Q Consensus 2 vQvENEYg~y~-------------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~-------~--~-----~~G~~~~~ 54 (491)
.+|-||..... .+.+|++..-+.||+ .--+.+||.+|-.... . + ..|. + .
T Consensus 122 WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~-~dP~a~L~~Ndy~~~~~~~k~~~~~~~v~~l~~~G~-~-i 198 (302)
T 1nq6_A 122 WDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTART-VDADAKLCYNDYNTDGQNAKSNAVYEMVKDFKQRGV-P-I 198 (302)
T ss_dssp EEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHH-HCTTSEEEEEESSCSSSSHHHHHHHHHHHHHHHHTC-C-C
T ss_pred EEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHH-hCCCCEEEecccccccCchHHHHHHHHHHHHHHCCC-C-c
Confidence 57889987542 024699999999998 5667889988753210 0 0 1121 1 1
Q ss_pred eeeeec-CCCCC-CCCchhHHhHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeec
Q 011205 55 AVFAAV-DFSTG-AEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHG 132 (491)
Q Consensus 55 ~v~~~~-~f~~~-~~~~~~f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hG 132 (491)
|.++.- -+... ..+......++++... +.|.++||+-..- . ...-++.+...+..+++...-.++
T Consensus 199 DgIG~q~H~~~~~~~~~~~~~~l~~~a~~-g~pi~iTE~di~~------~-~~~qa~~~~~~~~~~~~~~~v~gi----- 265 (302)
T 1nq6_A 199 DCVGFQSHFNSNSPVPSDFQANLQRFADL-GVDVQITELDIEG------S-GSAQAANYTKVVNACLAVTRCTGI----- 265 (302)
T ss_dssp CEEEECCEEBTTBCCCTTHHHHHHHHHTT-TCEEEEEEEEECC------C-HHHHHHHHHHHHHHHHTSTTEEEE-----
T ss_pred ceEEEEEeecCCCCCHHHHHHHHHHHHhc-CCcEEEeeCCCCC------c-hHHHHHHHHHHHHHHHhCCCceEE-----
Confidence 233210 01011 1233334445666433 5799999995321 0 001123333333333332221232
Q ss_pred ccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHH
Q 011205 133 GTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRV 181 (491)
Q Consensus 133 GTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~ 181 (491)
|-||++-+.. ..+. ++.-++++++++. |-|.++++.
T Consensus 266 -t~Wg~~D~~s-------W~~~----~~~ll~d~~~~pK-pA~~~~~~~ 301 (302)
T 1nq6_A 266 -TVWGVTDKYS-------WRSG----GTPLLFDGDYNKK-PAYDAVLAA 301 (302)
T ss_dssp -EESCSCGGGC-------TTGG----GCCSSBCTTSCBC-HHHHHHHHH
T ss_pred -EEEcCCCCCC-------cCCC----CCCccCCCCCCCC-HHHHHHHHh
Confidence 3455543211 1111 3444569999999 599998865
No 46
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=32.57 E-value=1e+02 Score=29.98 Aligned_cols=122 Identities=17% Similarity=0.223 Sum_probs=58.5
Q ss_pred ccccccCCCC---C-CCHHHHHHHHHHHHhhcCCceEEEeccCCccccc---cCCCcC-CCeeeeecCCCCCCCCchhHH
Q 011205 2 VQIENEFGSY---G-DDKEYLHHLVTLARAHLGKDIILYTTDGGTRETL---LKGTIR-GDAVFAAVDFSTGAEPWPIFK 73 (491)
Q Consensus 2 vQvENEYg~y---~-~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~~~---~~G~~~-~~~v~~~~~f~~~~~~~~~f~ 73 (491)
++|=||-..- . .-++|++.+.+.+|+ .+.+.+++-........+ ....+. ...+|..-.+ ++.... .+.
T Consensus 159 ~el~NEp~~~~~w~~~~~~~~~~~~~~IR~-~dp~~~I~v~~~~w~~~~~~~~~~~~~~~n~v~s~H~Y-~~~~~~-~~~ 235 (327)
T 3pzt_A 159 YEIANEPNGDVNWKRDIKPYAEEVISVIRK-NDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYALHFY-AGTHGQ-FLR 235 (327)
T ss_dssp EECCSCCCSSCCTTTTHHHHHHHHHHHHHH-HCSSSCEEECCHHHHTCHHHHHTSCCCCTTEEEEEEEE-TTTCCH-HHH
T ss_pred EEeccCCCCCcccHHHHHHHHHHHHHHHHh-hCCCCEEEEeCCcccccchhhhhCCCCCCCeEEEEEec-CCCchH-HHH
Confidence 4677997631 1 236899999999999 676655543322111111 011111 1124433333 332222 222
Q ss_pred hHHHhcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEe
Q 011205 74 LQKQFNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMA 130 (491)
Q Consensus 74 ~~~~~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~ 130 (491)
....+....+.|++++|| |+....|.. ..+.+.....+..+-+.+.+..++-+
T Consensus 236 ~~~~~~~~~g~Pv~igEf--G~~~~~g~g--~~~~~~~~~~l~~~~~~~i~w~~W~~ 288 (327)
T 3pzt_A 236 DKANYALSKGAPIFVTEW--GTSDASGNG--GVFLDQSREWLKYLDSKTISWVNWNL 288 (327)
T ss_dssp HHHHHHHHTTCCEEEEEE--ESSCTTSCS--CCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHcCCcEEEEcc--CCCCCCCCC--cccHHHHHHHHHHHHHcCCeeEEEEe
Confidence 211221112579999999 555555432 23444444555555556655434333
No 47
>3e5a_B Targeting protein for XKLP2; aurora A, serine/threonine-protein kinase, cofactor, TPX2, V inhibitor, phosphorylation, ATP-binding, cell cycle; HET: TPO VX6; 2.30A {Homo sapiens} PDB: 3ha6_B* 1ol5_B*
Probab=28.34 E-value=18 Score=24.79 Aligned_cols=10 Identities=60% Similarity=0.982 Sum_probs=7.6
Q ss_pred cccccCCCCc
Q 011205 154 DLTSYDYDAP 163 (491)
Q Consensus 154 ~~TSYDY~Ap 163 (491)
+.|||-||||
T Consensus 5 v~~sYSfDaP 14 (44)
T 3e5a_B 5 VKSSYSYDAP 14 (44)
T ss_dssp --CCCCCSSC
T ss_pred cccceeccCC
Confidence 4689999999
No 48
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=27.91 E-value=2.2e+02 Score=28.82 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhhcCCceEEEeccCCccc---------------cccCCCcCCCeeeeec-CCCCC-CCCchhHHhHHH
Q 011205 15 KEYLHHLVTLARAHLGKDIILYTTDGGTRE---------------TLLKGTIRGDAVFAAV-DFSTG-AEPWPIFKLQKQ 77 (491)
Q Consensus 15 ~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~---------------~~~~G~~~~~~v~~~~-~f~~~-~~~~~~f~~~~~ 77 (491)
.+|++..-+.||+ .--++.||.+|-.... ....|. + .|.++.- -+..+ ..+...-..+++
T Consensus 148 ~~~i~~af~~Ar~-~dP~a~l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~-~-iDgiG~q~H~~~~~~~~~~~~~~l~~ 224 (436)
T 2d1z_A 148 NDWIEVAFRTARA-ADPAAKLCYNDYNIENWTWAKTQGVYNMVRDFKQRGV-P-IDCVGFQSHFNSGSPYNSNFRTTLQN 224 (436)
T ss_dssp TTHHHHHHHHHHH-HCTTSEEEEEESSCCSTTSHHHHHHHHHHHHHHHHTC-C-CCEEEECCEEBTTBCCCTTHHHHHHH
T ss_pred hHHHHHHHHHHHh-hCCCCEEEEeccccccCChhHHHHHHHHHHHHHhCCC-c-ccEEEEeeEEcCCCCCHHHHHHHHHH
Confidence 6899999999999 5677889998853311 001222 1 1222210 01001 122333344566
Q ss_pred hcCCCCCCCcccccccccccccCCCCcCCCHHHHHHHHHHHHHcCCeeeEEEeecccCCCCcCCCCCCCCCCCCCCcccc
Q 011205 78 FNAPGKSPPLSSEFYTGWLTHWGEKIAKTDADFTASYLEKILSQNGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTS 157 (491)
Q Consensus 78 ~~~~~~~P~~~~E~~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TS 157 (491)
|... ..|.+++|+-.. ...++.+...+...++...-.++.+ ||+.-+..+ .+.
T Consensus 225 ~a~~-g~~v~iTEldv~----------~~qa~~y~~~~~~~~~~~~~~gvt~------Wg~~d~~sW-------~~~--- 277 (436)
T 2d1z_A 225 FAAL-GVDVAITELDIQ----------GASSSTYAAVTNDCLAVSRCLGITV------WGVRDTDSW-------RSG--- 277 (436)
T ss_dssp HHTT-TCEEEEEEEEET----------TCCHHHHHHHHHHHHTCTTEEEEEE------SCSBGGGCT-------TGG---
T ss_pred HHHc-CCeEEEeecchh----------HHHHHHHHHHHHHHHhcCCceEEEe------ccccCCccc-------ccc---
Confidence 6433 569999999532 2345666666666666544344433 454432211 111
Q ss_pred cCCCCccCCCCCCChHHHHHHHHHHHh
Q 011205 158 YDYDAPIKESGDVDNPKFKAIRRVVEK 184 (491)
Q Consensus 158 YDY~Api~E~G~~t~pKy~~lr~~i~~ 184 (491)
++-...+++|..+ |-|..+++.++.
T Consensus 278 -~~~~L~d~~g~~k-pa~~~v~~~l~~ 302 (436)
T 2d1z_A 278 -DTPLLFNGDGSKK-AAYTAVLNALNG 302 (436)
T ss_dssp -GCCSSBCTTSCBC-HHHHHHHHHHTT
T ss_pred -ccccccccCCCcc-hHHHHHHHHhhc
Confidence 1235678899998 599999988865
No 49
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=25.15 E-value=2.4e+02 Score=27.58 Aligned_cols=128 Identities=16% Similarity=0.098 Sum_probs=59.5
Q ss_pred ccccccCCCCC-----CC----HHHHHHHHHHHHhhcCCceEEE-eccCCccccc---cCCCcCCCeeeeecCCCCCCCC
Q 011205 2 VQIENEFGSYG-----DD----KEYLHHLVTLARAHLGKDIILY-TTDGGTRETL---LKGTIRGDAVFAAVDFSTGAEP 68 (491)
Q Consensus 2 vQvENEYg~y~-----~d----~~Ym~~L~~~~~~~~Gi~vpl~-t~dg~~~~~~---~~G~~~~~~v~~~~~f~~~~~~ 68 (491)
++|=||-.... .+ ++|++.+.+.+|+ .+-+.+++ -...+.. .+ ....+...++.-+..++.....
T Consensus 184 ~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~-~dp~~~I~v~g~~w~~-~~~~~~~~p~~~~n~~ys~H~Y~~~~~ 261 (359)
T 4hty_A 184 YEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQA-HNPKAIALVAGFNWAY-DLKEAAANPIDRQNIAYVSHPYPQKVG 261 (359)
T ss_dssp EESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHH-HCTTCEEEEECHHHHT-CCHHHHHSCCSSSSEEEECCCCTTSSC
T ss_pred EEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH-hCCCcEEEEcCccccc-ccchhhcCCCCCCCEEEEEEeCCCCCC
Confidence 56778865321 11 6899999999999 56665443 2222211 11 1111111113333333322211
Q ss_pred chhHHh-HHHhcC-CCCCCCcccccccccccccCCCCcC-CCHHHHHHHHHHHHHcCCeeeEEEee
Q 011205 69 WPIFKL-QKQFNA-PGKSPPLSSEFYTGWLTHWGEKIAK-TDADFTASYLEKILSQNGSAVLYMAH 131 (491)
Q Consensus 69 ~~~f~~-~~~~~~-~~~~P~~~~E~~~Gwfd~WG~~~~~-~~~~~~~~~~~~~l~~g~s~n~YM~h 131 (491)
...-.. .+.+.. ....|+|++||..---+..|...+. ...+.....++.+-+.+.+..+.-+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~Pv~vtEfG~~~~~g~g~~~~~~~~~~y~~~~~~~~~~~~i~~~~Ws~~ 327 (359)
T 4hty_A 262 APYQANWERDFGFMADKYPVFATEIGYQRATDKGAHIPVIDDGSYGPRITDYFNSKGISWVAWVFD 327 (359)
T ss_dssp SSHHHHHHHHTGGGGGTSCEEEEEECCBCTTSTTCCTTSBCCSTHHHHHHHHHHHHTCEEEEEEES
T ss_pred cchHHHHHHHHHHHhcCCCEEEecccCCCCCCCCcccccccHHHHHHHHHHHHHHcCCeEEEEEeC
Confidence 111011 111110 1257999999954333444443222 22333444455556677776555443
No 50
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=22.31 E-value=47 Score=35.71 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=27.3
Q ss_pred EEEEECCeecee--ccCCCCCe----------eeEecCCccccccCcEEEE
Q 011205 421 GIAFVNEFNLGR--FWPSFGPQ----------CDLYVPAPILRHGENLVVI 459 (491)
Q Consensus 421 G~v~VNG~nlGR--YW~~~GPQ----------~tlYVP~~~Lk~G~N~ivv 459 (491)
=.|-|||..+.- =| .|.- ..+.||..+|+.++|+|.|
T Consensus 521 p~V~vNG~~v~vP~~w--~g~dq~~r~~fFg~ieipVp~~lL~~~~NtI~V 569 (591)
T 4aw7_A 521 PVVKINGTAVSVPDNW--KGYGQSNRNIFFGMIEVPFDIQLLKNGDNNVDI 569 (591)
T ss_dssp CEEEETTEEECCCSCC--SSCCCTTSSEEEEEEEEEECGGGCCSEEEEEEE
T ss_pred CEEEECCEEeccCccc--ccccccChhhceEEEEecCCHHHHhcCCCeEEE
Confidence 579999999863 13 2322 2467999999988999887
No 51
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=21.76 E-value=1.1e+02 Score=30.36 Aligned_cols=151 Identities=17% Similarity=0.166 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHHHhhcCCceEEEeccCCccc-------c-------ccCCCcCCCeeeeecCCCCC-----CCCchhHHh
Q 011205 14 DKEYLHHLVTLARAHLGKDIILYTTDGGTRE-------T-------LLKGTIRGDAVFAAVDFSTG-----AEPWPIFKL 74 (491)
Q Consensus 14 d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~-------~-------~~~G~~~~~~v~~~~~f~~~-----~~~~~~f~~ 74 (491)
+.+|++..-+.||+ .--++.||-||-.... . ...|. + +..+++++. .++...-..
T Consensus 157 G~~~i~~aF~~Ar~-adP~a~L~~NDyn~~~~~~k~~~~~~~v~~l~~~G~-~----iDgiG~Q~H~~~~~p~~~~~~~~ 230 (348)
T 1w32_A 157 GPEYIDEAFRRARA-ADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGV-P----IDGVGFQMHVMNDYPSIANIRQA 230 (348)
T ss_dssp STHHHHHHHHHHHH-HCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTC-C----CCEEEECCEEESSSSCHHHHHHH
T ss_pred chHHHHHHHHHHHH-hCCCCEEEecccccccCCchHHHHHHHHHHHHHCCC-c----ccEEEeccccCCCCCCHHHHHHH
Confidence 46899999999999 6778899999864320 0 12232 1 112223221 112222334
Q ss_pred HHHhc--CCCCCCCcccccccccccccCCC---CcC--CC-------HHHHHHHHHH----HHH-c-CCeeeEEEeeccc
Q 011205 75 QKQFN--APGKSPPLSSEFYTGWLTHWGEK---IAK--TD-------ADFTASYLEK----ILS-Q-NGSAVLYMAHGGT 134 (491)
Q Consensus 75 ~~~~~--~~~~~P~~~~E~~~Gwfd~WG~~---~~~--~~-------~~~~~~~~~~----~l~-~-g~s~n~YM~hGGT 134 (491)
+++|. .. ..|..+||+-..-.+.|.+. ... .. .+..+..+++ +++ . ...+ .|=|
T Consensus 231 l~~~a~~~~-Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~~~~~~~~~~~~~v-----~git 304 (348)
T 1w32_A 231 MQKIVALSP-TLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVVPPGRR-----GGIT 304 (348)
T ss_dssp HHHHHTTCS-SCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHHHSCTTCE-----EEEE
T ss_pred HHHHhcccC-CCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHHHHHHhccccCCce-----EEEE
Confidence 56775 33 56999999964433322211 000 00 1222333333 331 1 2222 2334
Q ss_pred CCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHH
Q 011205 135 NFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVE 183 (491)
Q Consensus 135 NfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~ 183 (491)
-||++-+..+.. |.-..-++-.++++++++. |-|.+++++|+
T Consensus 305 ~WG~~D~~sW~~------p~~g~~~~plLfd~~~~pK-pAy~~v~~~l~ 346 (348)
T 1w32_A 305 VWGIADPDSWLY------THQNLPDWPLLFNDNLQPK-PAYQGVVEALS 346 (348)
T ss_dssp ESCSBGGGSTTS------EETTEECCCSSBCTTSCBC-HHHHHHHHHHH
T ss_pred EECCccCCccCC------CcCCCCCCCeeECCCCCCC-HHHHHHHHHHc
Confidence 466654322110 1001124555789999999 59999998875
No 52
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=20.88 E-value=31 Score=37.77 Aligned_cols=25 Identities=28% Similarity=0.452 Sum_probs=18.6
Q ss_pred CccccccCCCCC----CCHHHHHHHHHHH
Q 011205 1 MVQIENEFGSYG----DDKEYLHHLVTLA 25 (491)
Q Consensus 1 mvQvENEYg~y~----~d~~Ym~~L~~~~ 25 (491)
|.||+||||.+. +.++|.+||++..
T Consensus 144 ~w~v~NE~g~~~y~~~~~~~Fr~wLk~kY 172 (675)
T 3tty_A 144 MWHVSNEYGGYCYCDNCEKQFRVWLKERY 172 (675)
T ss_dssp EEECSSSCCCCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEccccCCCcCCHHHHHHHHHHHHHHh
Confidence 479999999642 3567888888764
No 53
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=20.48 E-value=1.8e+02 Score=28.90 Aligned_cols=166 Identities=17% Similarity=0.123 Sum_probs=80.5
Q ss_pred ccccccCCCCC-------------CCHHHHHHHHHHHHhhcCCceEEEeccCCccc---------c----ccCCCcCCCe
Q 011205 2 VQIENEFGSYG-------------DDKEYLHHLVTLARAHLGKDIILYTTDGGTRE---------T----LLKGTIRGDA 55 (491)
Q Consensus 2 vQvENEYg~y~-------------~d~~Ym~~L~~~~~~~~Gi~vpl~t~dg~~~~---------~----~~~G~~~~~~ 55 (491)
.+|-||..+.. -+.+|++..-+.||++.--++.||-+|-.... . ...|. + .|
T Consensus 141 wdv~NE~~~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~~dP~a~L~~Ndyn~~~~~k~~~~~~~v~~l~~~G~-~-id 218 (356)
T 2dep_A 141 WDVVNEVIEPNDPGGMRNSPWYQITGTEYIEVAFRATREAGGSDIKLYINDYNTDDPVKRDILYELVKNLLEKGV-P-ID 218 (356)
T ss_dssp EEEEECCBCTTSGGGBCCCHHHHHHTTHHHHHHHHHHHHHHCSSSEEEEEESCTTSHHHHHHHHHHHHHHHHTTC-C-CC
T ss_pred EEeecccccCCCCCCccCChHHHhccHHHHHHHHHHHHHhcCCCcEEEeccccccCcchHHHHHHHHHHHHHCCC-C-cc
Confidence 46778875422 13579999999999833456788888854211 0 12232 1 11
Q ss_pred eeeecCCCCC-----CCCchhHHhHHHhcCCCCCCCcccccccccccccCC-CCcC-CCH---HHHHHHHHHH----HHc
Q 011205 56 VFAAVDFSTG-----AEPWPIFKLQKQFNAPGKSPPLSSEFYTGWLTHWGE-KIAK-TDA---DFTASYLEKI----LSQ 121 (491)
Q Consensus 56 v~~~~~f~~~-----~~~~~~f~~~~~~~~~~~~P~~~~E~~~Gwfd~WG~-~~~~-~~~---~~~~~~~~~~----l~~ 121 (491)
. +++.+. .++...-+.+++|... ..|.++||+-....+.-.+ +... .+. +..+..++++ ++.
T Consensus 219 g---iG~Q~H~~~~~p~~~~~~~~l~~~a~~-Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~ 294 (356)
T 2dep_A 219 G---VGHQTHIDIYNPPVERIIESIKKFAGL-GLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKEN 294 (356)
T ss_dssp E---EEECCEEESSCSCHHHHHHHHHHHHTT-TCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred E---EEeeeeecCCCCCHHHHHHHHHHHHhC-CCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 2 222211 1122222335566433 5699999996543321111 1111 111 2233333333 331
Q ss_pred CCeeeEEEeecccCCCCcCCCCCCCCCCCCCCcccccCCCCccCCCCCCChHHHHHHHHHHHh
Q 011205 122 NGSAVLYMAHGGTNFGFYNGANTGNTESDYQPDLTSYDYDAPIKESGDVDNPKFKAIRRVVEK 184 (491)
Q Consensus 122 g~s~n~YM~hGGTNfG~~~Ga~~~~~~~~~~p~~TSYDY~Api~E~G~~t~pKy~~lr~~i~~ 184 (491)
...+ .|=|-||++-+..+.. .+ |. ..-+|.-++++++++. |-|.+++++++.
T Consensus 295 ~~~v-----~gvt~Wg~~D~~sW~~---~~-p~-g~~~~plLfd~~~~pK-pAy~a~~~~~~~ 346 (356)
T 2dep_A 295 KDIV-----SAVVFWGISDKYSWLN---GF-PV-KRTNAPLLFDRNFMPK-PAFWAIVDPSRL 346 (356)
T ss_dssp GGGE-----EEEEESCSBTTSCGGG---TS-SS-SSCCCCSSBCTTSCBC-HHHHHHHCC---
T ss_pred cCCe-----eEEEEecCccCCCccc---CC-CC-CCCCcceeECCCCCCC-HHHHHHHHHHhc
Confidence 1121 2335567664432210 01 11 1244555789999999 599999876654
Done!