BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011208
(491 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 178/503 (35%), Positives = 244/503 (48%), Gaps = 100/503 (19%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNETQDESVGQQK 60
MS+QDSV+TVYKCM++GAADYLVKP+RRNELRNLWQHVWRRQ+S+ + +ESVGQQK
Sbjct: 131 MSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRRQTSLAPDSFPWNESVGQQK 190
Query: 61 IEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQL 120
E S N++ ++ G D QSSCT+P+ E ESA
Sbjct: 191 AEGASANNSNGKRDDHVVSG---------NGGDAQSSCTRPEMEGESA------------ 229
Query: 121 WGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSD 180
DV++ +A ++E +S
Sbjct: 230 -------DVEVSARDA-----------------------------------VQMECAKSQ 247
Query: 181 VILTSEVCNVPVNSPRQVIDFMSAFNNHKPPSNN--GASRFDSSPQLDLSLRRTHPDGFE 238
T + N + + IDFM A N ++++S +LDLSLRR P+ E
Sbjct: 248 FNETRLLANELQSKQAEAIDFMGASFRRTGRRNREESVAQYESRIELDLSLRR--PNASE 305
Query: 239 NQVE-RKFILRHSNASAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKNFSNILTACNS 297
NQ + L S+ASAFTRY ++P + Q S+ V +Q+K + N ++ N+
Sbjct: 306 NQSSGDRPSLHPSSASAFTRYVHRPLQTQCSASPVVTDQRKNVAASQDDNIV-LMNQYNT 364
Query: 298 YTPAATLSTQRSVNSLATGHSKQ----SELAVSYPQQ--RPCPVPVS-VKVNSTNQAM-- 348
P + +R+ S TG S S+P Q P P P++ ++ N A
Sbjct: 365 SEPPPN-APRRNDTSFYTGADSPGPPFSNQLNSWPGQSSYPTPTPINNIQFRDPNTAYTS 423
Query: 349 ------------HKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSN 396
H+ S+ + P Q S ++S SA G++
Sbjct: 424 AMAPASLSPSPSSVSPHEYSSMFHPFNSKPEGLQDRDCSMDVDERRYVSSATEHSAIGNH 483
Query: 397 SNLDQVTAGRAAAESKNEEGLFPSNGNLR-SIQREAALNKFRLKRKDRCYDKKVRYESRK 455
+DQ+ E KNE+G S G ++ S+QREAAL KFR+KRKDRCY+KKVRYESRK
Sbjct: 484 --IDQLI------EKKNEDGYSLSVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRK 535
Query: 456 KLAEQRPRVKGQFVRQVHSETLP 478
KLAEQRPR+KGQFVRQV S P
Sbjct: 536 KLAEQRPRIKGQFVRQVQSTQAP 558
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 76/113 (67%), Gaps = 14/113 (12%)
Query: 363 HISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNG 422
H+SP T +S SS+ + A L+ GS C S+SN A ES N + P N
Sbjct: 518 HVSPTTGESGSSTVLDSARKTLS----GSVCDSSSN-----HMIAPTESSN---VVPENP 565
Query: 423 N-LRSI-QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVH 473
+ LR + QREAALNKFRLKRKDRC++KKVRY+SRK LAEQRPRVKGQFVRQ H
Sbjct: 566 DGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDH 618
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 129/288 (44%), Gaps = 69/288 (23%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ--SSMVSGNETQDE---- 54
MSS DSVS V+KCM++GAAD+LVKP+R+NELRNLWQHVWR+Q S ++ TQ E
Sbjct: 124 MSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLSSGVLDVQHTQQEDNLT 183
Query: 55 -----SVGQQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQSSCTKPDFEAESAH 109
G K E +EN N M C E+ SD QSSCT+ + EA+S
Sbjct: 184 ERHEQKTGVTKAEHVTENVVHKN-----MEC-------SEQESDAQSSCTRSELEADSRQ 231
Query: 110 VEDMPDLSRQLWGKSLQNDVKMQNHEARVNYGQKSLVPVTEAQGSEVAACKEANTRAHFD 169
++ L+ M H ++ ++ TE G T+ H
Sbjct: 232 TNNL-----------LEYKQPMGRHFSKPDHKN------TEKNGG---------TKIHAS 265
Query: 170 EDTELETHR-SDVILTSEVCNVPVNSPR--------QVIDFMSAFNNH------KPPSNN 214
D L R D L C+ +N + +ID N H + S
Sbjct: 266 NDGNLIPRREEDASLRRMTCSNDINCEKASRDMELVHIIDNQQKNNTHMEMDVARANSRG 325
Query: 215 GASRFDSSP--QLDLSLRRTHPDGFENQV--ERKFILRHSNASAFTRY 258
+ S P QL+LSLRR+ E+Q ER+ L HS +S F+ Y
Sbjct: 326 NDDKCFSIPAHQLELSLRRSDYSRLESQEKNERR-TLNHSTSSPFSLY 372
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 49/255 (19%)
Query: 223 PQLDLSLRRTHPDGFENQVERKF-ILRHSNASAFTRYT-NKPSEPQHSSLSGVCNQQKEF 280
P+L LSL+R+ FENQ E K L S+ASAF+R+ +K +E +L + + +
Sbjct: 256 PELGLSLKRSCSVSFENQDESKHQKLSLSDASAFSRFEESKSAEKAVVALEESTSGEPKT 315
Query: 281 ETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQSELAVSYPQQRPCPVPVSVK 340
T+S + + + S A T S Q ++ S + Q + Q++ P+P V+
Sbjct: 316 PTESHEKLRKVTSDQGS---ATTSSNQENIGSSSVSFRNQVLQSTVTNQKQDSPIP--VE 370
Query: 341 VNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSSFCNGAVSRLNSMGYGSACGSNSNLD 400
N A +++ GS S +
Sbjct: 371 SNREKAASKEVE----------------------------------------AGSQST-N 389
Query: 401 QVTAGRAAAESKNEEGLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQ 460
+ AG++++ K +E RS QREAAL KFRLKRKDRC+DKKVRY+SRKKLAEQ
Sbjct: 390 EGIAGQSSSTEKPKEEESAKQRWSRS-QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQ 448
Query: 461 RPRVKGQFVRQVHSE 475
RPRVKGQFVR V+S+
Sbjct: 449 RPRVKGQFVRTVNSD 463
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
MSSQDS+ V KCM+RGAADYL+KP+R+NEL+NLWQHVWRR
Sbjct: 118 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 420 SNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
S+G+ R QREAAL KFRLKRK+RC++KKVRY SRKKLAEQRP VKGQF+R+
Sbjct: 433 SSGSDRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR---QSSMVSGNETQDESVG 57
MSS DS+ V+KC+ GA D+LVKP+R+NEL+NLWQHVWRR S S + D+
Sbjct: 145 MSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSV 204
Query: 58 QQKIEATSENDAASN----HSSGYMACIQSKGEFIEKGSDEQSSCTK 100
+ + SENDA+ + + SG + ++ + GS QSS TK
Sbjct: 205 KPESTQGSENDASISDEHRNESGSSGGLSNQDGGSDNGSGTQSSWTK 251
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 4/63 (6%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGN 487
QREAAL KFR KRK+RC+ KKVRY+SRKKLAEQRPRV+GQFVR+ + T +N N
Sbjct: 668 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAAT----DDNDIKN 723
Query: 488 ISD 490
I D
Sbjct: 724 IED 726
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
MSS DS+ V+KC+ +GA D+LVKP+R+NEL+ LWQHVWRR
Sbjct: 159 MSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 199
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 135/344 (39%), Gaps = 91/344 (26%)
Query: 209 KPPSNNGASRFDSSPQLDLSLRR---THPDGFENQVERKFILRHSNASAFTRY-TNKPSE 264
K P +R + P L+LSL+R T D Q E++ +LR S+ SAFTRY T S
Sbjct: 391 KVPEGKDKNRDNIMPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDLSAFTRYHTPVASN 450
Query: 265 PQHSSLSGVC----NQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQ 320
+ G C N + +TDS N + NS + S N+ G + +
Sbjct: 451 QGGTGFVGSCSPHDNISEAMKTDSAYNMKS-----NSDAAPIKQGSNGSSNNNDMGSTTK 505
Query: 321 SELAVSYPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSS----- 375
+ + + P +VK N A H H G TD+ A+++
Sbjct: 506 NVVTKPSTNKERVMSPSAVKANGHTSAFHPAQHWTSPANTTG--KEKTDEVANNAAKRAQ 563
Query: 376 -----------------FCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAA---------- 408
+ + VSR N CGS++ D G AA
Sbjct: 564 PGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSG 623
Query: 409 ----------------AESKNEEGLFPSNGNL----------------------RSIQRE 430
AE N E +NG + R QRE
Sbjct: 624 SNNGSNGQNGSTTAVNAERPNME---IANGTINKSGPGGGNGSGSGSGNDMYLKRFTQRE 680
Query: 431 ---AALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
AA+ KFR KRK+R + KKVRY+SRK+LAEQRPRV+GQFVRQ
Sbjct: 681 HRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 37/41 (90%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
MSS D++ TV+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR
Sbjct: 143 MSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 183
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 425 RSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVH 473
RS +R AAL KFRLKRK+RC+DKKVRY +RKKLAE RPRV+GQFVRQ +
Sbjct: 439 RSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQAN 487
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 42
MS++D VS V KC+ GAA+YLVKP+R NEL NLW HVWRR+
Sbjct: 109 MSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRR 150
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 135/344 (39%), Gaps = 91/344 (26%)
Query: 209 KPPSNNGASRFDSSPQLDLSLRRTHPDGFEN---QVERKFILRHSNASAFTRY-TNKPSE 264
K P +R + P L+LSL+R+ G Q E++ +LR S+ SAFTRY T S
Sbjct: 391 KVPEGKDKNRDNIMPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASN 450
Query: 265 PQHSSLSGVC----NQQKEFETDSEKNFSNILTACNSYTPAATLSTQRSVNSLATGHSKQ 320
+ G C N + +TDS N + NS + S N+ G + +
Sbjct: 451 QGGTGFMGSCSLHDNSSEAMKTDSAYNMKS-----NSDAAPIKQGSNGSSNNNDMGSTTK 505
Query: 321 SELAVSYPQQRPCPVPVSVKVNSTNQAMHKLDHKLDSLEDLGHISPATDQSASSS----- 375
+ + + P +VK N A H H G TD+ A+++
Sbjct: 506 NVVTKPSTNKERVMSPSAVKANGHTSAFHPAQHWTSPANTTG--KEKTDEVANNAAKRAQ 563
Query: 376 -----------------FCNGAVSRLNSMGYGSACGSNSNLDQVTAGRAA---------- 408
+ + VSR N CGS++ D G AA
Sbjct: 564 PGEVQSNLVQHPRPILHYVHFDVSRENGGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSG 623
Query: 409 ----------------AESKNEEGLFPSNGNL----------------------RSIQRE 430
AE N E +NG + R QRE
Sbjct: 624 SNNGSNGQNGSTTAVNAERPNME---IANGTINKSGPGGGNGSGSGSGNDMYLKRFTQRE 680
Query: 431 ---AALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
AA+ KFR KRK+R + KKVRY+SRK+LAEQRPRV+GQFVRQ
Sbjct: 681 HRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 37/41 (90%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
MSS D++ TV+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR
Sbjct: 143 MSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 183
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 37/41 (90%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
MSS DS+ TV+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR
Sbjct: 162 MSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 40/47 (85%)
Query: 429 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 475
REAALNKFR KRK R + KKVRY+SRK+LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 37/41 (90%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
MSS DS+ TV+KC+ +GA D+LVKP+R+NEL+NLWQHVWRR
Sbjct: 162 MSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 202
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 40/47 (85%)
Query: 429 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 475
REAALNKFR KRK R + KKVRY+SRK+LAEQRPR++GQFVRQ E
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESENHSGN 487
+RE AL KFR KR RC+DKK+RY +RK+LAE+RPRVKGQFVR+++ + L + S +
Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSAD 591
Query: 488 ISD 490
D
Sbjct: 592 YDD 594
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 42
MS QD V V KC+ GAADYLVKP+R NEL NLW H+WRR+
Sbjct: 100 MSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRR 141
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQS-----SMVSGNETQDES 55
MS+ DS S V K + GA DYL+KPVR L+N+WQHV R++ S SG +D
Sbjct: 106 MSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTG 165
Query: 56 VG----QQKIEATSENDAASNHSSGYMACIQSKGEFIEKGSDEQ--SSCTKP 101
QQ E N ++ N +G + + + E ++G D++ SS KP
Sbjct: 166 GDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKP 217
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6
PE=2 SV=2
Length = 406
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 395 SNSNLDQV-----TAGRAAAESKNE---EGLFPSNGNLRSIQREAALNKFRLKRKDRCYD 446
S +LD V T G + AE+ + GL G+ REA ++++R KR+ R +
Sbjct: 315 SEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFS 374
Query: 447 KKVRYESRKKLAEQRPRVKGQFVRQ 471
KK+RYE RK AE+RPR+KG+FV++
Sbjct: 375 KKIRYEVRKLNAEKRPRMKGRFVKR 399
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 426 SIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSE 475
S+ REA + ++R KRK+R ++K +RY SRK AE RPR+KG+F ++ +E
Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETE 331
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 424 LRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
L S +REA + ++R KRK+R ++K +RY SRK AE RPR+KG+F ++
Sbjct: 290 LTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 337
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 416 GLFPSNGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
G PS+G REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 349 GCLPSSG-FGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSS 44
MS+ DS S V K + GA DYL+KPVR L+N+WQHV R++ S
Sbjct: 115 MSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRS 158
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8
PE=2 SV=2
Length = 319
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 37/44 (84%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
+REA + ++R KRK+R ++KK+RYE RK A++RPR+KG+FVR+
Sbjct: 270 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 387 MGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSI--QREAALNKFRLKRKDRC 444
+ +GS GSNS+ D A S L + +L + R A+ +++ KRK R
Sbjct: 341 ITFGSEKGSNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRR 400
Query: 445 YDKKVRYESRKKLAEQRPRVKGQFVR 470
YDK +RYESRK A+ R RV+G+FV+
Sbjct: 401 YDKTIRYESRKARADTRLRVRGRFVK 426
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 424 LRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHS 474
L +REA + ++R KRK+R ++K +RY SRK AE RPR+KG+F ++ S
Sbjct: 224 LSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 424 LRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
L ++REA + ++R K+K R +DK +RY SRK AE RPR+KG+F ++
Sbjct: 273 LTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 429 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSET 476
REA++ +++ KR+ R + KK+RY+ RK A+QRPR+KG+FVR+ + T
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNEST 430
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7
PE=2 SV=1
Length = 392
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
+REA + +++ KR+ R + KK+RYE RK AEQRPR+KG+FV++
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 423 NLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQVHSETLPLESE 482
+ S+ REA + ++R K+K R ++K +RYE+RK AE RPR+KG+F ++ + + ++
Sbjct: 320 HFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQ-IEVDQM 378
Query: 483 NHSGNISDG 491
+ +SDG
Sbjct: 379 FSTAALSDG 387
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 378 NGAVSRL---NSMGYGSACGSNSNLDQVTAGRAAAESKNEEGLFPSNGNLRSIQREAALN 434
NG++S + +SM G S ++ D + + ++ ++ +P L REA +
Sbjct: 233 NGSLSHMVNVSSMDLGVVPESTTS-DATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVL 291
Query: 435 KFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVRQ 471
++R K+K R ++K +RY SRK AE+RPR+KG+F ++
Sbjct: 292 RYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 429 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVR 470
R+ A+ +++ K+K R YDK +RYE+RK AE R RVKG+FV+
Sbjct: 357 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVK 398
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 424 LRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFV-RQVHSE 475
L + REA + ++R KRK R ++K +RY SRK AE RPRV G+F R++ +E
Sbjct: 301 LSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEAE 353
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSM 45
MS +TV + GA DYL+KP+R EL+N+WQHV RR+ M
Sbjct: 90 MSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVM 134
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 42
M+S +TV K + GA D+L+KPVR EL N+WQH++R+Q
Sbjct: 89 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQ 130
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 42
M+S +TV K + GA D+L+KPVR EL N+WQH++R+Q
Sbjct: 89 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQ 130
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 36/47 (76%)
Query: 424 LRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVR 470
+ S++R +AL++++ K+K R Y+K +RYESRK AE R R++G+F +
Sbjct: 282 INSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV---WRRQSSMVSG 48
+S DSV +V K M+ GAADYL+KP+R +LR +++H+ R + S+V+G
Sbjct: 120 ISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMRERRSVVTG 170
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFV 469
QR +L++FR KR RC++KKVRY R+++A + R KGQF
Sbjct: 145 QRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFT 186
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFV 469
QR A+L +FR KRK R +DKK+RY RK++A + R KGQF
Sbjct: 146 QRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFT 187
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9
PE=2 SV=1
Length = 372
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 421 NGNLRSIQREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVR 470
N S+ R A+ +++ K+K R +DK+VRY SRK A+ R RVKG+FV+
Sbjct: 307 NACSHSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSG---NETQDESVG 57
+S+ V K + GA DYL+KPVR EL+N+WQHV R + G N + + G
Sbjct: 95 LSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKRDGSG 154
Query: 58 QQKIEATSENDAASN 72
+ + + +N+ N
Sbjct: 155 NEGVGNSDQNNGKGN 169
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 42
MS S V K + GA DYL+KP+R EL+ +WQHV R++
Sbjct: 89 MSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKK 130
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWR 40
+S+ V K + GA DYL+KPVR EL+N+WQHV R
Sbjct: 95 LSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVR 134
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 428 QREAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFV 469
QR A+L +FR KRK R +DK +RY RK++A + R KGQF
Sbjct: 142 QRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFT 183
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 429 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVR 470
R A+ +++ K+K R +DK+VRY SRK+ A+ R RVKG+FV+
Sbjct: 316 RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVK 357
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRR 41
+S+ +V K ++ GA DYLVKPV EL+N+W HV ++
Sbjct: 95 LSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 135
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQ 42
MS + +V K GA DY+VKPV+ + N+WQH+ R++
Sbjct: 112 MSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRKR 153
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHV 38
+S+ ++T KC+ GA ++L KP+ +L+N+WQHV
Sbjct: 101 ISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSS 44
MS + TV + + GA D+LVKPV + + LW+HV+R++ S
Sbjct: 117 MSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMS 160
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 429 REAALNKFRLKRKDRCYDKKVRYESRKKLAEQRPRVKGQFVR 470
R A +++ K+ R + K++RY SRK A+ R RVKG+FV+
Sbjct: 307 RNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVK 348
>sp|Q5EBA1|SUV3_RAT ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Rattus
norvegicus GN=Supv3l1 PE=2 SV=1
Length = 776
Score = 39.3 bits (90), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Query: 141 GQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVID 200
G+K L P+T +Q ++A + +HF E HR D+ L E+ N PV+ P Q
Sbjct: 452 GEKELEPITTSQALQIAG-RAGRFSSHFKEGEVTTMHRDDLALLKEILNRPVD-PIQAAG 509
Query: 201 F------MSAFNNHKPPS--NNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNA 252
+ F H P + +N F Q+D + D F+ E +++H
Sbjct: 510 LHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQVDGQYFVCNMDDFKFSAE---LIQHIPL 566
Query: 253 SAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKN 287
S RY + P + VC+ +F +N
Sbjct: 567 SLRVRYVFC-TAPINKKQPFVCSSLLQFARQYSRN 600
>sp|Q80YD1|SUV3_MOUSE ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Mus musculus
GN=Supv3l1 PE=2 SV=1
Length = 779
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Query: 141 GQKSLVPVTEAQGSEVAACKEANTRAHFDEDTELETHRSDVILTSEVCNVPVNSPRQVID 200
G+K L P+T +Q ++A + +HF E HR D+ L ++ N PV+ P Q
Sbjct: 452 GEKELEPITTSQALQIAG-RAGRFSSHFKEGQVTTMHRDDLALLKDILNRPVD-PIQAAG 509
Query: 201 F------MSAFNNHKPPS--NNGASRFDSSPQLDLSLRRTHPDGFENQVERKFILRHSNA 252
+ F H P + +N F Q+D + D F+ E +++H
Sbjct: 510 LHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQVDGQYFVCNMDDFKFSAE---LIQHIPL 566
Query: 253 SAFTRYTNKPSEPQHSSLSGVCNQQKEFETDSEKN 287
S RY + P + VC+ +F +N
Sbjct: 567 SLRVRYVFC-TAPINKKQPFVCSSLLQFARQYSRN 600
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 443 RCYDKKVRYESRKKLAEQRPRVKGQFVR 470
R + K++RY SRK A+ R RVKG+FV+
Sbjct: 290 RMFGKQIRYASRKARADTRKRVKGRFVK 317
>sp|Q9ZWS9|ARR3_ARATH Two-component response regulator ARR3 OS=Arabidopsis thaliana
GN=ARR3 PE=2 SV=1
Length = 231
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 1 MSSQDSVSTVYKCMMRGAADYLVKPVRRNELRNLWQHVWRRQSSMVSGNE 50
MSS++ ++ + +C+ GA D+L+KPV+ +++ L ++ R GN+
Sbjct: 123 MSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTRDVKVAAEGNK 172
>sp|P59047|NALP5_HUMAN NACHT, LRR and PYD domains-containing protein 5 OS=Homo sapiens
GN=NLRP5 PE=2 SV=2
Length = 1200
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 81 IQSKGEFIEKGSDEQSSCTKPDFEAESAHVEDMPDLSRQLWGKSL 125
Q+ E ++K S E ++C+ P FE E+A+VE + L + +G SL
Sbjct: 77 FQTFKELLKKKSSESTTCSIPQFEIENANVECLALLLHEYYGASL 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.124 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,220,839
Number of Sequences: 539616
Number of extensions: 6950535
Number of successful extensions: 16835
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 16712
Number of HSP's gapped (non-prelim): 163
length of query: 491
length of database: 191,569,459
effective HSP length: 122
effective length of query: 369
effective length of database: 125,736,307
effective search space: 46396697283
effective search space used: 46396697283
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)