Query 011209
Match_columns 491
No_of_seqs 266 out of 1609
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 22:48:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011209.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011209hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 2.2E-49 4.8E-54 408.2 34.6 306 2-387 4-333 (365)
2 KOG0698 Serine/threonine prote 100.0 2.8E-49 6.1E-54 404.5 30.8 269 55-391 32-311 (330)
3 PF00481 PP2C: Protein phospha 100.0 2.2E-46 4.8E-51 370.0 18.7 240 65-376 2-254 (254)
4 KOG0697 Protein phosphatase 1B 100.0 3.4E-44 7.3E-49 342.4 24.3 263 60-389 19-296 (379)
5 PTZ00224 protein phosphatase 2 100.0 1.3E-43 2.9E-48 366.6 29.8 239 65-389 24-276 (381)
6 COG0631 PTC1 Serine/threonine 100.0 8.9E-41 1.9E-45 331.4 23.9 243 65-387 10-255 (262)
7 KOG0700 Protein phosphatase 2C 100.0 1.5E-38 3.3E-43 320.5 20.6 260 75-364 83-378 (390)
8 KOG0699 Serine/threonine prote 100.0 6.9E-38 1.5E-42 308.1 18.7 169 205-392 330-510 (542)
9 cd00143 PP2Cc Serine/threonine 100.0 9.4E-36 2E-40 291.0 29.7 246 65-383 3-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 7.1E-35 1.5E-39 285.8 29.7 241 66-381 9-255 (255)
11 PRK14559 putative protein seri 100.0 3E-35 6.4E-40 320.3 27.3 244 65-389 377-640 (645)
12 KOG1323 Serine/threonine phosp 100.0 9.1E-29 2E-33 241.7 22.1 278 89-387 140-490 (493)
13 KOG1379 Serine/threonine prote 99.9 3.4E-20 7.3E-25 182.2 20.3 214 75-383 89-330 (330)
14 KOG0618 Serine/threonine phosp 99.8 1.1E-19 2.5E-24 198.4 16.4 244 65-388 524-776 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 3.3E-18 7.2E-23 163.8 17.9 189 68-346 3-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 2.8E-15 6E-20 141.5 20.3 174 75-361 15-192 (193)
17 TIGR02865 spore_II_E stage II 99.5 3.9E-12 8.4E-17 143.5 22.7 194 71-383 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.3 3.3E-10 7.2E-15 106.5 20.8 123 205-384 60-193 (193)
19 COG2208 RsbU Serine phosphatas 98.0 0.00075 1.6E-08 70.5 21.7 125 205-384 231-366 (367)
20 PF06324 Pigment_DH: Pigment-d 42.3 6 0.00013 22.7 -0.6 13 468-480 5-17 (18)
21 PRK06369 nac nascent polypepti 22.9 3E+02 0.0064 24.1 6.3 52 305-356 39-98 (115)
22 PRK10693 response regulator of 20.3 8.7E+02 0.019 24.3 11.0 42 186-231 210-253 (303)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.2e-49 Score=408.21 Aligned_cols=306 Identities=28% Similarity=0.448 Sum_probs=234.7
Q ss_pred CCcccCCCCCCCCCCCCCCCCCcccccCccccCCCCCCCCcccCCCCccccCCceeeCCCc-----ceeEeeeccCCCCC
Q 011209 2 GSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNGSS-----EIASLFTQQGKKGT 76 (491)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~l~~~~~r~~~~g~s-----~~~~~~s~~G~R~~ 76 (491)
|.|.-...+++..|.|+.|+....+.+.. .++.|+--...+.+...+...|.+... -.++.+|++|.|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~ 78 (365)
T PLN03145 4 GISGGGEGGSSGGGRPPNPSVAACCKPSL-----VRHSSLVKTPASDISVENELTFENMDTEFIPVVRSGAWADIGSRSS 78 (365)
T ss_pred cccCCCCCCCcCCCCCCCCcccccccchh-----hcchhhhhccccccccccccccccchhhccCceEEEEEccccCCCC
Confidence 34555566778888888887766443222 122222111111112222221222111 13567899999999
Q ss_pred CCcceeeecccCC--------CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccc
Q 011209 77 NQDAMIVWENFAS--------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINS 148 (491)
Q Consensus 77 NEDa~~v~~~~~~--------~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (491)
|||++++..++.. ..+..||||||||| |+.+++++++.|+..|......
T Consensus 79 nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~--------------------- 135 (365)
T PLN03145 79 MEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDF--------------------- 135 (365)
T ss_pred CCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhcc---------------------
Confidence 9999998776531 23468999999999 9999999999999988642110
Q ss_pred cccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCCcceEEEEEEeCCeEEEEEeCCc
Q 011209 149 EDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID-CFCSGTTAVTLIKQGQHLVIGNVGDS 227 (491)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d-~~~sGTTavv~li~~~~L~vaNVGDS 227 (491)
...+.++|.++|..+++++......+ ...+|||++++++.++.+||+|||||
T Consensus 136 ---------------------------~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDS 188 (365)
T PLN03145 136 ---------------------------PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDC 188 (365)
T ss_pred ---------------------------chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCc
Confidence 02356778889999999886654333 44599999999999999999999999
Q ss_pred eeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCC----
Q 011209 228 RAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDF---- 303 (491)
Q Consensus 228 Ra~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~---- 303 (491)
||||+++++ +++||.||+|..+.|++||.+.||.|.. .|+ .+.+++||||||+.+|.+
T Consensus 189 Rayl~r~g~-----~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-------g~v------~g~l~vTRalGD~~~k~~k~~~ 250 (365)
T PLN03145 189 RAVLCRRGK-----AIEMSRDHKPMCSKERKRIEASGGYVYD-------GYL------NGQLNVARALGDWHMEGMKGSD 250 (365)
T ss_pred eEEEEcCCe-----EEEecCCCCCCCHHHHHHHHHcCCceec-------ceE------CCcccccccccccccccccccc
Confidence 999999765 8999999999999999999999998853 233 677899999999988754
Q ss_pred --CceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHH----cCCCHHHHHHHHHHHHHHhhhhcCCCCCccceE
Q 011209 304 --GLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVA----SAPARSSAARSLVESAVRAWRRKYPTSKVDDCA 377 (491)
Q Consensus 304 --gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~----~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiT 377 (491)
+++++|||..++|+++|.|||||||||||+|+++++++++. ...+++++|+.|++.|+.+ ++.||||
T Consensus 251 ~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-------gs~DNIT 323 (365)
T PLN03145 251 GGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-------KSGDNLA 323 (365)
T ss_pred CCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-------CCCCCEE
Confidence 48899999999999999999999999999999999877764 3468999999999999998 8999999
Q ss_pred EEEEEeCCCC
Q 011209 378 VVCLFLDSNS 387 (491)
Q Consensus 378 vIvv~l~~~~ 387 (491)
||||+|+..+
T Consensus 324 vIVV~l~~~~ 333 (365)
T PLN03145 324 VVVVCFQSQP 333 (365)
T ss_pred EEEEEeecCC
Confidence 9999999753
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-49 Score=404.46 Aligned_cols=269 Identities=37% Similarity=0.555 Sum_probs=233.1
Q ss_pred ceeeCCCcceeEeeeccCCCCCCCcceeeecccC-----CCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhc
Q 011209 55 RLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFA-----SRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNI 129 (491)
Q Consensus 55 r~~~~g~s~~~~~~s~~G~R~~NEDa~~v~~~~~-----~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~ 129 (491)
+...+.....+++++++|+|..|||++.....+. +.....||||||||| |+.+|+|++++|+..|...+....
T Consensus 32 ~~~~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~ 109 (330)
T KOG0698|consen 32 KLSINESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPK 109 (330)
T ss_pred cccccccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhccc
Confidence 4556677777888899999999999999877644 333689999999999 999999999999999998764432
Q ss_pred chhHHHHHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHH-HHHHHHHHhhccccCCCcce
Q 011209 130 TSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFK-VMDRELRMHATIDCFCSGTT 208 (491)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~-~~d~~l~~~~~~d~~~sGTT 208 (491)
.. ..++.++.++|. .+|.++... ..+...+|||
T Consensus 110 ~~---------------------------------------------~~~~~a~~~~F~~~~D~~~~~~-~~~~~~~gst 143 (330)
T KOG0698|consen 110 DR---------------------------------------------QDVKDALRRAFLTKTDSEFLEK-REDNRSGGST 143 (330)
T ss_pred ch---------------------------------------------HHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcce
Confidence 20 347788999999 599999765 2234567888
Q ss_pred EEEEEEeC-CeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCC
Q 011209 209 AVTLIKQG-QHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSP 287 (491)
Q Consensus 209 avv~li~~-~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~ 287 (491)
++++++.+ .+|||||+|||||||+++++ ++++||.||+|+.++|+.||+++||+|+.... +.|| ++
T Consensus 144 av~~vi~~~~~l~vaN~GDSRaVl~~~~~----~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~---~~Rv------~G 210 (330)
T KOG0698|consen 144 AVVALIKKGRKLYVANVGDSRAVLSRKGG----VAVQLSVDHKPDREDERERIEAAGGRVSNWGG---VWRV------NG 210 (330)
T ss_pred eeeeeEecCCEEEEEEcCCCcEEEecCCC----eeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCC---cceE------ec
Confidence 88777775 59999999999999998743 59999999999999999999999999987665 6788 57
Q ss_pred ceeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHh
Q 011209 288 GLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRA 363 (491)
Q Consensus 288 gLa~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~ 363 (491)
+|||+|||||+++|.++++++||+....+++.|+|||||||||||+|+++|++++|+. ...+..++..|...|+.+
T Consensus 211 ~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~ 290 (330)
T KOG0698|consen 211 VLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR 290 (330)
T ss_pred eEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc
Confidence 9999999999999988899999999999999999999999999999999999999999 568999999999999999
Q ss_pred hhhcCCCCCccceEEEEEEeCCCCCCCC
Q 011209 364 WRRKYPTSKVDDCAVVCLFLDSNSNTNG 391 (491)
Q Consensus 364 w~~~~~~g~~DNiTvIvv~l~~~~~~~~ 391 (491)
++.||||||||+|.+......
T Consensus 291 -------~s~DnitvvvV~l~~~~~~~~ 311 (330)
T KOG0698|consen 291 -------GSKDNITVVVVRLKSSPKSPS 311 (330)
T ss_pred -------CCCCCeEEEEEEecCcccccc
Confidence 999999999999998876533
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.2e-46 Score=369.98 Aligned_cols=240 Identities=41% Similarity=0.586 Sum_probs=199.4
Q ss_pred eEeeeccCCCCCCCcceeeecccC---CCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcc
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFA---SRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISIN 141 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~---~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 141 (491)
+++.+.+|.|..|||++++..++. ...+..||+|||||| |+.+++++++.|+..|...+.....
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhg--G~~~a~~~~~~l~~~l~~~~~~~~~----------- 68 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHG--GSEAAEYASQNLPEFLKENLSFNDG----------- 68 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHHHTC-----------
T ss_pred cCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCC--ChhhHHHHHHHHHHHHHhhcccccc-----------
Confidence 356688999999999999998875 456889999999999 9999999999999888776544322
Q ss_pred ccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHH-HHHHHHHhhcc-ccCCCcceEEEEEEeCCeE
Q 011209 142 TAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKV-MDRELRMHATI-DCFCSGTTAVTLIKQGQHL 219 (491)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~-~d~~l~~~~~~-d~~~sGTTavv~li~~~~L 219 (491)
..+.++|.++|.. +++.+...... ....+|||++++++.+++|
T Consensus 69 -----------------------------------~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l 113 (254)
T PF00481_consen 69 -----------------------------------NDIEEALRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKL 113 (254)
T ss_dssp -----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEE
T ss_pred -----------------------------------cchhhcccceeeeccccccccccccccccccccccccccccccee
Confidence 1356777778887 78777663221 5678999999999999999
Q ss_pred EEEEeCCceeEEEEeCCCCceEEE-EecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeeccccccc
Q 011209 220 VIGNVGDSRAVLGTRDKDDSLVAM-QLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDF 298 (491)
Q Consensus 220 ~vaNVGDSRa~L~r~~~d~~~~~~-qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~ 298 (491)
|+||||||||||++.+. .. +||.||+|..+.|+.||++.||.+.. ..|+ .+.|++||||||+
T Consensus 114 ~vanvGDSravl~~~~~-----~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~------~~rv------~g~l~~sRalGd~ 176 (254)
T PF00481_consen 114 YVANVGDSRAVLCRNGG-----IIKQLTRDHKPSNPDERERIRKAGGRVSE------NGRV------NGVLAVSRALGDF 176 (254)
T ss_dssp EEEEESS-EEEEEETTE-----EEEESS---STTSHHHHHHHHHTT-GEEE------TEEE------TTTBSSSB-EE-G
T ss_pred EEEeeeeeeeeeeeccc-----cccccccccccchhhccceeecccccccc------chhh------hhccccccccccc
Confidence 99999999999999876 55 99999999999999999999999864 3566 6779999999999
Q ss_pred ccCC---CCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCC----HHHHHHHHHHHHHHhhhhcCCCC
Q 011209 299 CLKD---FGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPA----RSSAARSLVESAVRAWRRKYPTS 371 (491)
Q Consensus 299 ~lK~---~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~----~~~aA~~Lv~~A~~~w~~~~~~g 371 (491)
.+|. ++|+++|+|..+.|+++|+|||||||||||+|+++|+++++.+... ++.+|+.|++.|+++ +
T Consensus 177 ~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~-------g 249 (254)
T PF00481_consen 177 DLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIAR-------G 249 (254)
T ss_dssp GGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHT-------T
T ss_pred cccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc-------C
Confidence 9999 7899999999999999999999999999999999999999998765 899999999999999 9
Q ss_pred Cccce
Q 011209 372 KVDDC 376 (491)
Q Consensus 372 ~~DNi 376 (491)
+.|||
T Consensus 250 s~DNi 254 (254)
T PF00481_consen 250 SKDNI 254 (254)
T ss_dssp HHSHE
T ss_pred CCCCC
Confidence 99997
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-44 Score=342.37 Aligned_cols=263 Identities=31% Similarity=0.443 Sum_probs=221.9
Q ss_pred CCcceeEeeeccCCCCCCCcceeeecccC-CCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHh
Q 011209 60 GSSEIASLFTQQGKKGTNQDAMIVWENFA-SRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREI 138 (491)
Q Consensus 60 g~s~~~~~~s~~G~R~~NEDa~~v~~~~~-~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~ 138 (491)
|-.-.+++.|+||+|-.|||++.....+. .-+++.||+|||||. |+.+|.+++++|.+.+...-.......
T Consensus 19 GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHA--Gs~va~~c~~hLlehi~sse~F~~~~k------ 90 (379)
T KOG0697|consen 19 GNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHA--GSQVANHCAEHLLEHIISSEEFRGMTK------ 90 (379)
T ss_pred CCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCcc--chHHHHHHHHHHHHHhhhhHHHhhhcc------
Confidence 33446889999999999999998765544 346899999999999 999999999999998876432221100
Q ss_pred hccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCCcceEEEEEEeC
Q 011209 139 SINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID--CFCSGTTAVTLIKQG 216 (491)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d--~~~sGTTavv~li~~ 216 (491)
.-....++.-+...|..+|+.++...... ...+|||||++++..
T Consensus 91 ----------------------------------~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp 136 (379)
T KOG0697|consen 91 ----------------------------------NGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSP 136 (379)
T ss_pred ----------------------------------CCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecC
Confidence 00123466778888888888776554322 456999999999999
Q ss_pred CeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeeccccc
Q 011209 217 QHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFG 296 (491)
Q Consensus 217 ~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalG 296 (491)
.++|++|+|||||+|+|++. ++.-|.||||.+|.|++||+.+||.|+- .|| ++-||++||||
T Consensus 137 ~h~y~~NcGDSRavl~rng~-----~~f~TqDHKP~~p~EkeRIqnAGGSVMI-------qRv------NGsLAVSRAlG 198 (379)
T KOG0697|consen 137 THIYIINCGDSRAVLCRNGE-----VVFSTQDHKPYLPKEKERIQNAGGSVMI-------QRV------NGSLAVSRALG 198 (379)
T ss_pred ceEEEEecCcchhheecCCc-----eEEeccCCCCCChHHHHHHhcCCCeEEE-------EEe------cceeeeehhcc
Confidence 99999999999999999887 8999999999999999999999999864 677 89999999999
Q ss_pred ccccCCCC--------ceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcC----CCHHHHHHHHHHHHHHhh
Q 011209 297 DFCLKDFG--------LISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA----PARSSAARSLVESAVRAW 364 (491)
Q Consensus 297 D~~lK~~g--------v~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~----~~~~~aA~~Lv~~A~~~w 364 (491)
|+.+|..+ |+++|+|+...-.+.|+|||||+||+||+++++|+.++|++. .+..++|..+++.++-+
T Consensus 199 DydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhK- 277 (379)
T KOG0697|consen 199 DYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHK- 277 (379)
T ss_pred CcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhc-
Confidence 99999643 899999999988888889999999999999999999999874 58899999999999999
Q ss_pred hhcCCCCCccceEEEEEEeCCCCCC
Q 011209 365 RRKYPTSKVDDCAVVCLFLDSNSNT 389 (491)
Q Consensus 365 ~~~~~~g~~DNiTvIvv~l~~~~~~ 389 (491)
|+.||+|+|+|.|-..+..
T Consensus 278 ------GSRDNMsivlvcfp~APkv 296 (379)
T KOG0697|consen 278 ------GSRDNMSIVLVCFPGAPKV 296 (379)
T ss_pred ------cCccCceEEEEecCCCCCC
Confidence 9999999999999765543
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.3e-43 Score=366.61 Aligned_cols=239 Identities=32% Similarity=0.457 Sum_probs=199.5
Q ss_pred eEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccC
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 144 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
++..|.+|+|..|||++++... .+..||||||||| |..+|+++++.|+..+......
T Consensus 24 ~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHg--G~~~S~~~~~~l~~~l~~~~~~----------------- 80 (381)
T PTZ00224 24 CASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHV--NDECSQYLARAWPQALEKEPEP----------------- 80 (381)
T ss_pred EEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCC--cHHHHHHHHHHHHHHHHhcccc-----------------
Confidence 6677999999999999887532 3557999999999 9999999999998766432100
Q ss_pred CccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe-CCeEEEEE
Q 011209 145 SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ-GQHLVIGN 223 (491)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~-~~~L~vaN 223 (491)
...+.|.++|..+|+++.... ..+|||++++++. +..+||+|
T Consensus 81 ---------------------------------~~~~~l~~a~~~~d~~i~~~~----~~~GsTatv~lI~~~~~l~vaN 123 (381)
T PTZ00224 81 ---------------------------------MTDERMEELCLEIDEEWMDSG----REGGSTGTFCVIMKDVHLQVGN 123 (381)
T ss_pred ---------------------------------ccHHHHHHHHHHHHHHHHhcc----cCCCCeEEEEEEEECCEEEEEE
Confidence 001246678888888886543 2469999988876 57999999
Q ss_pred eCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCC
Q 011209 224 VGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDF 303 (491)
Q Consensus 224 VGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~ 303 (491)
|||||+||++.++ +++||.||++.++.|+.||.+.+|.+.. .|+ .+++++||||||..+|..
T Consensus 124 VGDSRayl~r~g~-----~~~LT~DH~~~~~~E~~RI~~~gg~v~~-------~Rv------~G~l~vTRalGd~~~K~~ 185 (381)
T PTZ00224 124 VGDSRVLVCRDGK-----LVFATEDHKPNNPGERQRIEACGGRVVS-------NRV------DGDLAVSRAFGDRSFKVK 185 (381)
T ss_pred cccceEEEEECCE-----EEEcccCCCCCCHHHHhHHHHccCEecc-------ccc------cCceeeecccCCcccccc
Confidence 9999999999765 8999999999999999999999998743 244 678999999999887654
Q ss_pred C--------ceecceEEEEEcCCCCeEEEEEcCCCCC-CCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhhhhcCCC
Q 011209 304 G--------LISVPDISYRRLTDKDEFIVLATDGIWD-VLSNEEVVEIVAS----APARSSAARSLVESAVRAWRRKYPT 370 (491)
Q Consensus 304 g--------v~~~Pdv~~~~L~~~D~fLVLaSDGlwD-~Ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~ 370 (491)
+ ++++|||..+.+.++| ||||||||||| +|+++||++++.. ..+++.+|+.|++.|+.+
T Consensus 186 ~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~r------- 257 (381)
T PTZ00224 186 GTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRR------- 257 (381)
T ss_pred cccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc-------
Confidence 3 6799999999999888 99999999999 8999999999873 468999999999999999
Q ss_pred CCccceEEEEEEeCCCCCC
Q 011209 371 SKVDDCAVVCLFLDSNSNT 389 (491)
Q Consensus 371 g~~DNiTvIvv~l~~~~~~ 389 (491)
++.||||||||+|......
T Consensus 258 Gs~DNITvIvV~~~~~~~~ 276 (381)
T PTZ00224 258 GSKDNISCLIVQLKDGASY 276 (381)
T ss_pred CCCCCEEEEEEEeeCCCCh
Confidence 9999999999999976643
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-41 Score=331.40 Aligned_cols=243 Identities=29% Similarity=0.379 Sum_probs=202.2
Q ss_pred eEeeeccCC-CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 65 ASLFTQQGK-KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 65 ~~~~s~~G~-R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
++..|+.|. |..|||++++..+..... ..||+|||||| ||.+++++++.++..|.+.+........
T Consensus 10 ~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~G--Gh~~ge~aS~~~v~~l~~~~~~~~~~~~---------- 76 (262)
T COG0631 10 VAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMG--GHAAGEVASKLAVEALARLFDETNFNSL---------- 76 (262)
T ss_pred eeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCcc--chhHHHHHHHHHHHHHHHHHHhcccccc----------
Confidence 344566665 889999999988655545 78999999999 9999999999999999988766432110
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc--cccCCCcceEEEEEEeCCeEEE
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT--IDCFCSGTTAVTLIKQGQHLVI 221 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~--~d~~~sGTTavv~li~~~~L~v 221 (491)
...+.+.+.+++..++..+..... .+...||||++++++.++++|+
T Consensus 77 --------------------------------~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~ 124 (262)
T COG0631 77 --------------------------------NESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYV 124 (262)
T ss_pred --------------------------------chhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEE
Confidence 011567777888888888877654 4578999999999999999999
Q ss_pred EEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccC
Q 011209 222 GNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLK 301 (491)
Q Consensus 222 aNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK 301 (491)
|||||||+||++++. ++|||.||++.+..++.++....+.... +|. .++|||||++..
T Consensus 125 a~vGDSR~yl~~~~~-----~~~lT~DH~~~~~~~~~~~~~~~~~~~~-------~~~---------~~ltralG~~~~- 182 (262)
T COG0631 125 ANVGDSRAYLLRDGE-----LKQLTEDHSLVNRLEQRGIITPEEARSH-------PRR---------NALTRALGDFDL- 182 (262)
T ss_pred EEccCCeEEEEcCCc-----eEEeccCCcHHHHHHHhcCCCHHHHHhC-------ccc---------hhhhhhcCCCcc-
Confidence 999999999999886 9999999999888888886554332211 111 279999999854
Q ss_pred CCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEE
Q 011209 302 DFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCL 381 (491)
Q Consensus 302 ~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv 381 (491)
..|++....+.++| |||||||||||.+++++|++++....+++.+|+.|++.|+.. ++.||+|||+|
T Consensus 183 -----~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~-------g~~DNiT~ilv 249 (262)
T COG0631 183 -----LEPDITELELEPGD-FLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEG-------GGPDNITVVLV 249 (262)
T ss_pred -----cceeEEEEEcCCCC-EEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhc-------CCCCceEEEEE
Confidence 78999999999996 999999999999999999999999889999999999999998 99999999999
Q ss_pred EeCCCC
Q 011209 382 FLDSNS 387 (491)
Q Consensus 382 ~l~~~~ 387 (491)
.+....
T Consensus 250 ~~~~~~ 255 (262)
T COG0631 250 RLNGEG 255 (262)
T ss_pred Eeeccc
Confidence 998765
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=320.51 Aligned_cols=260 Identities=28% Similarity=0.365 Sum_probs=193.9
Q ss_pred CCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCcccc--ccc
Q 011209 75 GTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSE--DTS 152 (491)
Q Consensus 75 ~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 152 (491)
..-||+.-+.... ..++.||||||||| |..|++++.++|..++..++.......+. ....+ ..-
T Consensus 83 ~~~edrv~~~~s~--~~~~~fvGIyDGhg--Gp~as~~v~~~L~~~v~~~L~~~~~~~~~----------~f~~e~~~~~ 148 (390)
T KOG0700|consen 83 KAEEDRVSVAVSE--ENGWLFVGIYDGHG--GPDASRFLSDHLYPYVARELQGLLWQDEE----------RFPSEYKSEE 148 (390)
T ss_pred CcccCcceeeeec--cCCeEEEEEecCCC--CccHHHHHHHHHHHHHHHHhhhhhhhhcc----------ccccccccch
Confidence 3446665554332 36889999999999 99999999999999999776554332210 00000 000
Q ss_pred cccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc------cccCCCcceEEEEEEeCCeEEEEEeCC
Q 011209 153 FVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT------IDCFCSGTTAVTLIKQGQHLVIGNVGD 226 (491)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~------~d~~~sGTTavv~li~~~~L~vaNVGD 226 (491)
+..+...+.+. +. .......+.++|.+||.+.+++|..... .....+|+||++.++.+..|||||+||
T Consensus 149 ~~~~~~~~~~~-~~-----~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GD 222 (390)
T KOG0700|consen 149 LEHLLVYWKQL-SS-----ADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGD 222 (390)
T ss_pred hhhhhhhhhcc-cc-----cCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCc
Confidence 00111111111 00 0011356778899999999998854332 225679999999999999999999999
Q ss_pred ceeEEEEeCCCCc-eEEEEecccCCCCCHHHHHHHHhcCC---eEEeecCCCcceeeeccCCCCCceeecccccccccCC
Q 011209 227 SRAVLGTRDKDDS-LVAMQLTVDLKPNLPAEAERIRKCKG---RVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD 302 (491)
Q Consensus 227 SRa~L~r~~~d~~-~~~~qLT~DH~p~~~~E~~Ri~~~gg---~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~ 302 (491)
|||+|+....++. |+++|||.||+.++++|++||+...- .+.-.. -+|| .|-|+++|||||..||.
T Consensus 223 SRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~----~~Rv------kG~L~vsRAfGd~~lK~ 292 (390)
T KOG0700|consen 223 SRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNK----HWRV------KGILQVSRAFGDGYLKW 292 (390)
T ss_pred chhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeec----ccee------eEEEEeeeeccceeecc
Confidence 9999999998888 69999999999999999999997543 111100 0344 78899999999999994
Q ss_pred C--------------------CceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcC----CCHHHHHHHHHH
Q 011209 303 F--------------------GLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA----PARSSAARSLVE 358 (491)
Q Consensus 303 ~--------------------gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~----~~~~~aA~~Lv~ 358 (491)
. -++++|+|++++|++.|+|||||||||||+|+|+|++++|... ...+.+|+.||+
T Consensus 293 ~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr 372 (390)
T KOG0700|consen 293 PEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIR 372 (390)
T ss_pred hhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 1 1999999999999999999999999999999999999999884 223789999999
Q ss_pred HHHHhh
Q 011209 359 SAVRAW 364 (491)
Q Consensus 359 ~A~~~w 364 (491)
.|+.+.
T Consensus 373 ~aL~~a 378 (390)
T KOG0700|consen 373 HALGRA 378 (390)
T ss_pred HHHhhh
Confidence 999773
No 8
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-38 Score=308.12 Aligned_cols=169 Identities=35% Similarity=0.543 Sum_probs=145.3
Q ss_pred CcceEEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCC
Q 011209 205 SGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNY 284 (491)
Q Consensus 205 sGTTavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~ 284 (491)
+|||+||+|+.+.+|||||.||||+||+|.++ ++.+++||+|....|..||+++||+|.-- .||
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~Gk-----AvdmS~DHKPEDevE~~RI~~AGG~vtlD------GRV----- 393 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGK-----AVDMSVDHKPEDEVETNRIHAAGGQVTLD------GRV----- 393 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCc-----eeecccCCCcccHHHHHHHHhcCCeEeec------cee-----
Confidence 89999999999999999999999999999987 99999999999999999999999987421 344
Q ss_pred CCCceeecccccccccCCCC--------ceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHH
Q 011209 285 DSPGLAMARAFGDFCLKDFG--------LISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS----APARSSA 352 (491)
Q Consensus 285 ~~~gLa~tRalGD~~lK~~g--------v~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~----~~~~~~a 352 (491)
++||+++|||||..||.-- |++-|||....|++.|+|+|||+||||++|+.+||+++|+. .....++
T Consensus 394 -NGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~i 472 (542)
T KOG0699|consen 394 -NGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEI 472 (542)
T ss_pred -cCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHH
Confidence 9999999999999999621 88899999999999999999999999999999999999865 3467788
Q ss_pred HHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCCCCCCCC
Q 011209 353 ARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGI 392 (491)
Q Consensus 353 A~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~~~~~~ 392 (491)
|+.|++.++.--..- .+.+-||+||||+.|. +...+.+
T Consensus 473 ceeL~D~CLAp~T~G-DGTGCDNMT~ii~~Fk-rk~~elq 510 (542)
T KOG0699|consen 473 CEELCDACLAPSTDG-DGTGCDNMTVIITTFK-RKSKELQ 510 (542)
T ss_pred HHHHHHhhcCCCCCC-CCcCCCcceEEEEEec-cchhhcC
Confidence 999998888652221 1245799999999998 4444343
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=9.4e-36 Score=290.96 Aligned_cols=246 Identities=41% Similarity=0.546 Sum_probs=205.5
Q ss_pred eEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccC
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 144 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
++..+.+|.|..|||++++...... .+..+|+|||||| |+..++++++.+...|...+.....
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~~~-------------- 65 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHG--GHAAGEFASKLLVEELLEELEETLT-------------- 65 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCC--hHHHHHHHHHHHHHHHHHHHhhccc--------------
Confidence 4556778889999999999765321 3678999999999 9999999999999999876543211
Q ss_pred CccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCcceEEEEEEeCCeEEEE
Q 011209 145 SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATI--DCFCSGTTAVTLIKQGQHLVIG 222 (491)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~--d~~~sGTTavv~li~~~~L~va 222 (491)
.....+...|.++|..+++.+...... ....+|||++++++.++.++++
T Consensus 66 -----------------------------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~ 116 (254)
T cd00143 66 -----------------------------LSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVA 116 (254)
T ss_pred -----------------------------cchHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEE
Confidence 012346677888888888888765532 3567899999999999999999
Q ss_pred EeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCC
Q 011209 223 NVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD 302 (491)
Q Consensus 223 NVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~ 302 (491)
|+||||+|+++++. ++++|.||.+..+.|..|+...++.+.. ....+...++|+||+..+|.
T Consensus 117 ~vGDsr~~~~~~~~-----~~~lt~dh~~~~~~~~~~i~~~~~~~~~-------------~~~~~~~~~t~~lG~~~~~~ 178 (254)
T cd00143 117 NVGDSRAVLCRNGE-----AVQLTKDHKPVNEEERERIEKAGGRVSN-------------GRVPGVLAVTRALGDFDLKP 178 (254)
T ss_pred EecCcEEEEEcCCc-----eeEcCCCCCCcChHHHHHHHHcCCcEEe-------------CEEcCceeeccccCCccccC
Confidence 99999999999876 8999999999989999999999886421 01144578999999998884
Q ss_pred CCceecceEEEEEc-CCCCeEEEEEcCCCCCCCCHHHHHHHHHcCC---CHHHHHHHHHHHHHHhhhhcCCCCCccceEE
Q 011209 303 FGLISVPDISYRRL-TDKDEFIVLATDGIWDVLSNEEVVEIVASAP---ARSSAARSLVESAVRAWRRKYPTSKVDDCAV 378 (491)
Q Consensus 303 ~gv~~~Pdv~~~~L-~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~---~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTv 378 (491)
. +..+|++..+.+ .++| +||||||||||+|++++|.+++.... +++++|+.|++.|... ++.||+|+
T Consensus 179 ~-~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~-------~~~Dn~t~ 249 (254)
T cd00143 179 G-VSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRR-------GSHDNITV 249 (254)
T ss_pred C-EEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhC-------CCCCCEEE
Confidence 4 889999999999 7777 89999999999999999999999887 8999999999999998 79999999
Q ss_pred EEEEe
Q 011209 379 VCLFL 383 (491)
Q Consensus 379 Ivv~l 383 (491)
||+++
T Consensus 250 i~~~~ 254 (254)
T cd00143 250 VVVRL 254 (254)
T ss_pred EEEeC
Confidence 99975
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=7.1e-35 Score=285.77 Aligned_cols=241 Identities=37% Similarity=0.533 Sum_probs=200.2
Q ss_pred EeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCC
Q 011209 66 SLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGS 145 (491)
Q Consensus 66 ~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 145 (491)
++.+.+|+|..|||++++..++. .+..+|+|||||| |+.+|+++++.+...+.........
T Consensus 9 ~~~~~~~~r~~neD~~~~~~~~~--~~~~~~~v~DG~g--g~~~~~~~~~~~~~~~~~~~~~~~~--------------- 69 (255)
T smart00332 9 GLSSMQGVRKPMEDAHVITPDLS--DSGAFFGVFDGHG--GSEAAKFLSKNLPEILAEELIKHKD--------------- 69 (255)
T ss_pred EEecCCCCCCCCcceEEEeccCC--CCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHhHhhccc---------------
Confidence 34577889999999999876542 5678999999999 9999999999999888764322211
Q ss_pred ccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCcceEEEEEEeCCeEEEEE
Q 011209 146 INSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATI--DCFCSGTTAVTLIKQGQHLVIGN 223 (491)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~--d~~~sGTTavv~li~~~~L~vaN 223 (491)
....+.+.+.+++..+++++...... ....+|||++++++.++.+|++|
T Consensus 70 -----------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~ 120 (255)
T smart00332 70 -----------------------------ELEDVEEALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVAN 120 (255)
T ss_pred -----------------------------chhHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEe
Confidence 00235566777788888877655433 24679999999999999999999
Q ss_pred eCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCC
Q 011209 224 VGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDF 303 (491)
Q Consensus 224 VGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~ 303 (491)
+||||+|+++.++ +.+||.||++....|..||.+.++.+... +..+.+.++|++|+..+|++
T Consensus 121 vGDsr~y~~~~~~-----~~~lt~dh~~~~~~~~~~i~~~~~~~~~~-------------~~~~~~~lt~~~g~~~~~~~ 182 (255)
T smart00332 121 VGDSRAVLCRNGK-----AVQLTEDHKPSNEDERARIEAAGGFVING-------------RVNGVLALSRAIGDFFLKPY 182 (255)
T ss_pred ccCceEEEEeCCc-----eeEcCCCCCCcCHHHHHHHHHcCCEEECC-------------eECCeEecccccCCHhhcCC
Confidence 9999999999765 78999999999999999999999876431 11345789999999988866
Q ss_pred CceecceEEEEEc-CCCCeEEEEEcCCCCCCCCHHHHHHHHHcCC---CHHHHHHHHHHHHHHhhhhcCCCCCccceEEE
Q 011209 304 GLISVPDISYRRL-TDKDEFIVLATDGIWDVLSNEEVVEIVASAP---ARSSAARSLVESAVRAWRRKYPTSKVDDCAVV 379 (491)
Q Consensus 304 gv~~~Pdv~~~~L-~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~---~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvI 379 (491)
++.+|++...++ .++| +||||||||||+|+++++.+++.... ++..+|+.|++.|... +..||+|||
T Consensus 183 -i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~-------~~~Dn~T~i 253 (255)
T smart00332 183 -VSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR-------GSKDNITVI 253 (255)
T ss_pred -eEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc-------CCCCCeEEE
Confidence 899999999996 7777 89999999999999999999998876 5999999999999988 899999999
Q ss_pred EE
Q 011209 380 CL 381 (491)
Q Consensus 380 vv 381 (491)
++
T Consensus 254 vv 255 (255)
T smart00332 254 VV 255 (255)
T ss_pred EC
Confidence 85
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=3e-35 Score=320.27 Aligned_cols=244 Identities=19% Similarity=0.249 Sum_probs=172.5
Q ss_pred eEeeeccCC-CCCCCcceeeecccC----CC----CCceEEEEecCCCCC--hHHHHHHHHHHHHHHHHhhhhhhcchhH
Q 011209 65 ASLFTQQGK-KGTNQDAMIVWENFA----SR----ADTIFCGVFDGHGPY--GHMVAKRVRDSLPLKLSSHWEVNITSEE 133 (491)
Q Consensus 65 ~~~~s~~G~-R~~NEDa~~v~~~~~----~~----~~~~l~gVfDGhG~~--G~~aA~~a~~~l~~~L~~~~~~~~~~~~ 133 (491)
++.+|+.|. |..|||++++..++. .. ....||+|||||||+ |+.||+++.+.|..++...+...
T Consensus 377 ~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~----- 451 (645)
T PRK14559 377 DAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDE----- 451 (645)
T ss_pred EEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccc-----
Confidence 567899997 899999988765421 01 235799999999943 44445555555544443321110
Q ss_pred HHHHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc----cccCCCcceE
Q 011209 134 VLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT----IDCFCSGTTA 209 (491)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~----~d~~~sGTTa 209 (491)
. ..++.+.+++..+++.|..... .....||||+
T Consensus 452 --------------------------------------~-----~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTl 488 (645)
T PRK14559 452 --------------------------------------L-----PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTL 488 (645)
T ss_pred --------------------------------------c-----cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcee
Confidence 0 0124566677777777754321 1345799999
Q ss_pred EEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCce
Q 011209 210 VTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGL 289 (491)
Q Consensus 210 vv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gL 289 (491)
+++++.++.+|++||||||+|++++++ .++|||+||++... ..+.| . . +...+ ......
T Consensus 489 v~alI~~~~l~ianVGDSRaYli~r~g----~l~QLT~DHs~~~~-----lv~~G-i-~-----~~~a~-----~~p~~~ 547 (645)
T PRK14559 489 VMALVQDTQVAVAHVGDSRLYRVTRKG----GLEQLTVDHEVGQR-----EIQRG-V-E-----PQIAY-----ARPDAY 547 (645)
T ss_pred eeEEEECCEEEEEEecCceEEEEecCC----eEEEeCCCCCHHHH-----HHHhC-C-C-----HHHHh-----cCcccc
Confidence 999999999999999999999996542 39999999986422 22222 1 0 00000 002356
Q ss_pred eecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCC--CCCH---HHHHHHHHcCCCHHHHHHHHHHHHHHhh
Q 011209 290 AMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWD--VLSN---EEVVEIVASAPARSSAARSLVESAVRAW 364 (491)
Q Consensus 290 a~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD--~Ls~---~ei~~iv~~~~~~~~aA~~Lv~~A~~~w 364 (491)
++|||||+...+. .+|++..+.+.++| ||||||||||| .+.+ +++..++....+++++|+.|++.|+.+
T Consensus 548 ~LTrALG~~~~~~----l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~- 621 (645)
T PRK14559 548 QLTQALGPRDNSA----IQPDIQFLEIEEDT-LLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQY- 621 (645)
T ss_pred eeeeccCCCCCCc----ccceEEEEEcCCCC-EEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-
Confidence 8999999865433 48999999999887 89999999999 4554 455677777788999999999999998
Q ss_pred hhcCCCCCccceEEEEEEeCCCCCC
Q 011209 365 RRKYPTSKVDDCAVVCLFLDSNSNT 389 (491)
Q Consensus 365 ~~~~~~g~~DNiTvIvv~l~~~~~~ 389 (491)
+++||||||||++...+..
T Consensus 622 ------gg~DNITvIvV~l~~~p~~ 640 (645)
T PRK14559 622 ------NGHDNITAILVRLKVRPQL 640 (645)
T ss_pred ------CCCCcEEEEEEEeccCCCC
Confidence 9999999999999876654
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=9.1e-29 Score=241.75 Aligned_cols=278 Identities=30% Similarity=0.394 Sum_probs=193.2
Q ss_pred CCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhH---HHHHhhccccCCccccccccccCCcccccccc
Q 011209 89 SRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEE---VLREISINTAGSINSEDTSFVSADEEPRASAD 165 (491)
Q Consensus 89 ~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (491)
.+.++.+|.+||||. |..+|-.|+..+..++...+........ ...+.+.....+. ...++.+..++.
T Consensus 140 ~~~~~~~~slfdgha--gs~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~-----s~~s~~~~~~~~-- 210 (493)
T KOG1323|consen 140 PRADGALFSLFDGHA--GSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSE-----SSYSMSEMSRED-- 210 (493)
T ss_pred CCCcceeeeeecCCC--cchHHHHHHHHHHHhhhHHHHHHHHHHhhhcccccccccccccc-----CCcccccccchh--
Confidence 445789999999999 9999999999999988877654332110 0000000000000 011111111110
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEe
Q 011209 166 LEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQL 245 (491)
Q Consensus 166 ~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qL 245 (491)
++.-.....+..+++.||+.||+++..........+|||++++|.--++||++|.|||||+|.|+++ +++|
T Consensus 211 ----ek~Ir~E~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnde-----irpl 281 (493)
T KOG1323|consen 211 ----EKRIRHEHLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDE-----IRPL 281 (493)
T ss_pred ----hccCchHHhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCC-----eeec
Confidence 1111223456789999999999999877766677899999999999999999999999999999988 9999
Q ss_pred cccCCCCCHHHHHHHHhcC--------CeEEeecC-------C---Ccceeeec--------------c----------C
Q 011209 246 TVDLKPNLPAEAERIRKCK--------GRVFALHD-------E---PEVARVWL--------------P----------N 283 (491)
Q Consensus 246 T~DH~p~~~~E~~Ri~~~g--------g~v~~~~~-------~---~~~~Rvwl--------------~----------~ 283 (491)
+.+.+|. .|++|++... +....+.. + .-.+|-|. . .
T Consensus 282 S~efTPe--tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrka 359 (493)
T KOG1323|consen 282 SKEFTPE--TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKA 359 (493)
T ss_pred ccccCcH--HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhh
Confidence 9999885 5788887532 22211100 0 00111110 0 0
Q ss_pred CCCCceeecccccccccC---------CCCceecceEEEEEcCC----CCeEEEEEcCCCCCCCCHHHHHHHHHcCC---
Q 011209 284 YDSPGLAMARAFGDFCLK---------DFGLISVPDISYRRLTD----KDEFIVLATDGIWDVLSNEEVVEIVASAP--- 347 (491)
Q Consensus 284 ~~~~gLa~tRalGD~~lK---------~~gv~~~Pdv~~~~L~~----~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~--- 347 (491)
+...-+.++|.|||..+| +| +++.|+|+.+.|.+ .|+.+|||||||||+|+|+|+..+|.+..
T Consensus 360 Rll~TigVsRGlGDH~Lkv~dsnl~iKPF-LssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~ 438 (493)
T KOG1323|consen 360 RLLATIGVSRGLGDHHLKVVDSNLSIKPF-LSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPST 438 (493)
T ss_pred hhhhhheeccccCcceeeeecCCcccchh-hhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCC
Confidence 223447899999999877 45 89999999988864 34499999999999999999999998742
Q ss_pred ---CH---HHHHHHHHHHHH-----HhhhhcCCC-CCccceEEEEEEeCCCC
Q 011209 348 ---AR---SSAARSLVESAV-----RAWRRKYPT-SKVDDCAVVCLFLDSNS 387 (491)
Q Consensus 348 ---~~---~~aA~~Lv~~A~-----~~w~~~~~~-g~~DNiTvIvv~l~~~~ 387 (491)
+| ..+|+.|+..|. +.|++...+ ++.|||||.||.|....
T Consensus 439 dp~Dp~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~ 490 (493)
T KOG1323|consen 439 DPADPSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCA 490 (493)
T ss_pred CCCChhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCC
Confidence 22 368899998885 348887666 78999999999997654
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.86 E-value=3.4e-20 Score=182.20 Aligned_cols=214 Identities=24% Similarity=0.252 Sum_probs=143.6
Q ss_pred CCCCcceeeecccCCCCCceEEEEecCCCCC---hHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCcccccc
Q 011209 75 GTNQDAMIVWENFASRADTIFCGVFDGHGPY---GHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDT 151 (491)
Q Consensus 75 ~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~---G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (491)
..-||++++..+ ....+.|||||+||| |-..+.|.++.+-. ..+..+....
T Consensus 89 ~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~-ce~~v~~~~~--------------------- 142 (330)
T KOG1379|consen 89 KGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSN-CERLVQNSDF--------------------- 142 (330)
T ss_pred CCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHH-HHHHhccccc---------------------
Confidence 356899999776 567799999999987 77888877665532 2222211110
Q ss_pred ccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCcee
Q 011209 152 SFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDSRA 229 (491)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDSRa 229 (491)
.. ......|.+||..+-.+ ..-.-++|||+++.+. +++||++|+|||-.
T Consensus 143 -------------------~~----~~P~~lL~~ay~~l~~~------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF 193 (330)
T KOG1379|consen 143 -------------------NP----SDPVNLLEKAYAELKSQ------KVPIVGSSTACILALDRENGKLHTANLGDSGF 193 (330)
T ss_pred -------------------CC----CChHHHHHHHHHHHhhc------CCCCCCcceeeeeeeecCCCeEEEeeccCcce
Confidence 00 01234566666654321 1123468899888888 89999999999999
Q ss_pred EEEEeCCCCceEEEEecccC--CCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCcee
Q 011209 230 VLGTRDKDDSLVAMQLTVDL--KPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLIS 307 (491)
Q Consensus 230 ~L~r~~~d~~~~~~qLT~DH--~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~ 307 (491)
.++|+++ +++-|..+ ..+.| +.+...|+- +.-+++|. .-
T Consensus 194 ~VvR~G~-----vv~~S~~Q~H~FN~P-------------yQLs~~p~~--------------~~~~~~d~-------p~ 234 (330)
T KOG1379|consen 194 LVVREGK-----VVFRSPEQQHYFNTP-------------YQLSSPPEG--------------YSSYISDV-------PD 234 (330)
T ss_pred EEEECCE-----EEEcCchheeccCCc-------------eeeccCCcc--------------ccccccCC-------cc
Confidence 9999775 55555432 21111 111111111 11123332 22
Q ss_pred cceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcC-----CCHHHHHHHHHHHHHHhhhh----------------
Q 011209 308 VPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA-----PARSSAARSLVESAVRAWRR---------------- 366 (491)
Q Consensus 308 ~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~-----~~~~~aA~~Lv~~A~~~w~~---------------- 366 (491)
..+++.+.+.++| .||||||||||+|.+++|++|+... ..++..|+.|++.|.+.-+.
T Consensus 235 ~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~ 313 (330)
T KOG1379|consen 235 SADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGF 313 (330)
T ss_pred ccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCc
Confidence 3477899999999 9999999999999999999998763 46899999999999765332
Q ss_pred cCCCCCccceEEEEEEe
Q 011209 367 KYPTSKVDDCAVVCLFL 383 (491)
Q Consensus 367 ~~~~g~~DNiTvIvv~l 383 (491)
++.+||.||||||+.++
T Consensus 314 ~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 314 KAYGGKPDDITVVLSSV 330 (330)
T ss_pred ccCCCCcccEEEEEecC
Confidence 25568999999999763
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.82 E-value=1.1e-19 Score=198.41 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=199.6
Q ss_pred eEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccC
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 144 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
+++.-..|+|..+-=+-+...+|.. .....||.|||-+ -..+..++++.+..+|...+....+.
T Consensus 524 ~Gv~~~~gqrnk~c~~~~~v~nf~~-~~~a~~g~~dgs~--n~~v~~~vq~~ma~~L~eev~~~~~e------------- 587 (1081)
T KOG0618|consen 524 YGVAGVSGQRNKVCSRAVWVENFFL-NPQATFGCFDGSR--NSRVLSLVQDTMASYLAEEVQLYGNE------------- 587 (1081)
T ss_pred eccchhcccccchhhhhhhhhhccc-CCcceEEEEcCCC--chhHHHHHHHHHHHHHHHHHHhccCh-------------
Confidence 4455567888777776666677765 4556889999999 88999999999999998876554331
Q ss_pred CccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEeC--------
Q 011209 145 SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQG-------- 216 (491)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~~-------- 216 (491)
.+.|..+|..+++++.+.+.. -|..++.+.+..
T Consensus 588 -----------------------------------t~~mr~~fl~~~rklg~~g~~----lg~~~~~~~i~~d~~~~asS 628 (1081)
T KOG0618|consen 588 -----------------------------------TEQMRNTFLRLNRKLGEEGQV----LGGSVVLCQIVEDSLSPASS 628 (1081)
T ss_pred -----------------------------------HHHHHHHHHHHhhhhhhhhcc----ccchhhheeecccccCcccc
Confidence 123778888999998766533 355556566553
Q ss_pred CeEEEEEeCCceeEEEEeCCCCceEEEEecccC-CCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccc
Q 011209 217 QHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDL-KPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAF 295 (491)
Q Consensus 217 ~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH-~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRal 295 (491)
..+++||+|+|.++++++++ ..++|.-. ....++|.+||+..+|.|.. + +..+|....||++
T Consensus 629 ~~l~~Anvg~c~avls~ng~-----~~p~t~~~~~~v~~eE~~RI~~~~g~i~e---d---------~k~ngvt~~tR~i 691 (1081)
T KOG0618|consen 629 KTLFAANVGTCMAVLSRNGK-----PLPTTRSPMLEVDREEYKRIVDSKGFITE---D---------NKLNGVTSSTRAI 691 (1081)
T ss_pred hhhhHhhhccchhhhhhcCC-----cCcccccccccCCHHHHHHHHHhcCeecC---C---------Ceeeceeeeeeec
Confidence 36899999999999999987 56666543 45589999999999998753 1 1125667899999
Q ss_pred cccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccc
Q 011209 296 GDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDD 375 (491)
Q Consensus 296 GD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DN 375 (491)
|-+.+-+. +.+.|+|....|++.|+||||++-+||++|+-+++++++++..+|-.||.+|++.|... |..||
T Consensus 692 G~~~l~P~-v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~AqSY-------gc~~n 763 (1081)
T KOG0618|consen 692 GPFSLFPH-VLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDLAQSY-------GCAEN 763 (1081)
T ss_pred cccccccc-ccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHHHHhc-------ccccC
Confidence 99988886 99999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eEEEEEEeCCCCC
Q 011209 376 CAVVCLFLDSNSN 388 (491)
Q Consensus 376 iTvIvv~l~~~~~ 388 (491)
++|+||++....+
T Consensus 764 v~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 764 VSVLVVRLNHLEE 776 (1081)
T ss_pred eeEEEEEeecchh
Confidence 9999999998766
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.79 E-value=3.3e-18 Score=163.85 Aligned_cols=189 Identities=23% Similarity=0.278 Sum_probs=98.1
Q ss_pred eeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCC--hHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCC
Q 011209 68 FTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPY--GHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGS 145 (491)
Q Consensus 68 ~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~--G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 145 (491)
.+++|++..|||++.++.. .+..+++|+||+|+. |+.+|+.+.+.+..++...+......
T Consensus 3 ~sh~~~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~-------------- 64 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPS-------------- 64 (212)
T ss_dssp ----TTSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHH--------------
T ss_pred ccccCCCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchH--------------
Confidence 3688999999999997654 556677999999954 66777777777766666543221110
Q ss_pred ccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEeCCeEEEEEeC
Q 011209 146 INSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVG 225 (491)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~~~~L~vaNVG 225 (491)
....+...+...+...+.. .... .........++||++++++.++.++++|||
T Consensus 65 -------------------------~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~tTl~~~v~~~~~~~~~~iG 117 (212)
T PF13672_consen 65 -------------------------SIEALIRAIKKEILSIVRA-FQSA-KQADLELRDYGTTLLALVIDPDKVYIFNIG 117 (212)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHH-----HH-HHHSGGGTT-EE-EEEEEEETTEEEEEEES
T ss_pred -------------------------HHHHHHHHHHHHHHHHhhh-hhhh-hhccccccccCceEEEEEEECCEEEEEEEC
Confidence 0001111121111111100 0000 111223566799999999999999999999
Q ss_pred CceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCc
Q 011209 226 DSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGL 305 (491)
Q Consensus 226 DSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv 305 (491)
|||+|+..+++ .+.+++.||.. |... .++.+.... .
T Consensus 118 D~~i~~~~~~g----~~~~l~~~~~~----~~~~-------------------------------~~~~~~~~~-----~ 153 (212)
T PF13672_consen 118 DSRIYVIRRNG----EIQQLTDDHSG----EYPN-------------------------------QTRSLTGDD-----P 153 (212)
T ss_dssp S-EEEEEEETT----EEEE-S---BH----HHHH-------------------------------CTTSCCHHC-----C
T ss_pred CCeEEEEECCC----EEEEcCCCccc----hhhh-------------------------------hhhccCccc-----c
Confidence 99998776543 37788888862 1111 112222110 1
Q ss_pred eecceEEEEEcCCCCeEEEEEcCCCCCCCCHHH-HHHHHHcC
Q 011209 306 ISVPDISYRRLTDKDEFIVLATDGIWDVLSNEE-VVEIVASA 346 (491)
Q Consensus 306 ~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~e-i~~iv~~~ 346 (491)
....++..+++.++| .|+|||||||+.|...+ +..++...
T Consensus 154 ~~~~~~~~~~~~~~d-~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 154 EPDVQYGSIPLEEGD-VILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp CTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred ccCCeEEEEEcCCCC-EEEEECcCccccCCCHHHHHHHhhhc
Confidence 112266677888888 77999999999998765 66666554
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.69 E-value=2.8e-15 Score=141.51 Aligned_cols=174 Identities=18% Similarity=0.137 Sum_probs=123.0
Q ss_pred CCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccccccccc
Q 011209 75 GTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFV 154 (491)
Q Consensus 75 ~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (491)
...-|.|.+... .++..+++|+|||| +...|.+++..+...+...+....
T Consensus 15 ~~~GD~~~~~~~---~~~~~~~~v~Dg~G--~G~~aa~~s~~~~~~~~~~~~~~~------------------------- 64 (193)
T smart00331 15 QVGGDFYDVVKL---PEGRLLIAIADVMG--KGLAAALAMSMARSALRTLLSEGI------------------------- 64 (193)
T ss_pred hcCccEEEEEEe---CCCeEEEEEEecCC--CChHHHHHHHHHHHHHHHHhhcCC-------------------------
Confidence 556788776553 24578999999999 777888888887777766432210
Q ss_pred cCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEE--eCCeEEEEEeCCceeEEE
Q 011209 155 SADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIK--QGQHLVIGNVGDSRAVLG 232 (491)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li--~~~~L~vaNVGDSRa~L~ 232 (491)
.+.+.+..+++.+... ....+|+|++++++ ..++++++|+||+|+|++
T Consensus 65 ---------------------------~~~~~l~~~n~~l~~~---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~ 114 (193)
T smart00331 65 ---------------------------SLSQILERLNRAIYEN---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLL 114 (193)
T ss_pred ---------------------------CHHHHHHHHHHHHHhc---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEE
Confidence 1223444555555443 12457999999988 578999999999999999
Q ss_pred EeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCceecceEE
Q 011209 233 TRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDIS 312 (491)
Q Consensus 233 r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~Pdv~ 312 (491)
+.++. .++++.+. ++.+|.. ....+++.
T Consensus 115 ~~~~~----~~~~~~~~------------------------------------------~~~lG~~------~~~~~~~~ 142 (193)
T smart00331 115 RADGG----LVEDLDDL------------------------------------------GAPLGLE------PDVEVDVR 142 (193)
T ss_pred ECCCC----eEEEcCCC------------------------------------------CceeeeC------CCCcceeE
Confidence 84321 34444331 1234433 22345778
Q ss_pred EEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCC--CHHHHHHHHHHHHH
Q 011209 313 YRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAP--ARSSAARSLVESAV 361 (491)
Q Consensus 313 ~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~--~~~~aA~~Lv~~A~ 361 (491)
.+.+.++| .|+|+||||||.++.+++.+++.+.. +++++++.+.+.+.
T Consensus 143 ~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 143 ELTLEPGD-LLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred EEeeCCCC-EEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 88999999 78999999999999999999998864 68888888887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.47 E-value=3.9e-12 Score=143.50 Aligned_cols=194 Identities=17% Similarity=0.138 Sum_probs=128.2
Q ss_pred cCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccccc
Q 011209 71 QGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSED 150 (491)
Q Consensus 71 ~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (491)
++.+..+.|.|.+... +++..+++|+||+|. |..|+ .++..+...+.+.+.....
T Consensus 561 k~g~~vsGD~y~~~~l---~~g~~~~~laDGmGh-G~~Aa-~~S~~~~~ll~~~~~~g~~-------------------- 615 (764)
T TIGR02865 561 KDGELVSGDSYSFGKL---SAGKYAVAISDGMGS-GPEAA-QESSACVRLLEKFLESGFD-------------------- 615 (764)
T ss_pred CCCCcccCceEEEEEE---CCCEEEEEEEcccCC-CHHHH-HHHHHHHHHHHHHHHcCCC--------------------
Confidence 3445789999887653 245678899999993 44443 4444444444433211110
Q ss_pred cccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCce
Q 011209 151 TSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDSR 228 (491)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDSR 228 (491)
...++..+|..+.... ...+.+|+.+++++ .+.+.++|+|+++
T Consensus 616 --------------------------------~~~ai~~lN~~L~~~~---~~~~faTl~l~~IDl~~g~~~~~~aG~~p 660 (764)
T TIGR02865 616 --------------------------------REVAIKTVNSILSLRS---TDEKFSTLDLSVIDLYTGQAEFVKVGAVP 660 (764)
T ss_pred --------------------------------HHHHHHHHHHHHHhCC---CCCeEEEEEEEEEECCCCeEEEEecCCCc
Confidence 1234445555543321 12468999888885 6889999999999
Q ss_pred eEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCceec
Q 011209 229 AVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISV 308 (491)
Q Consensus 229 a~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~ 308 (491)
.|+.+++. +.+++..+-| +|-. -..+
T Consensus 661 ~~i~r~~~-----v~~i~s~~lP-------------------------------------------lGil------~~~~ 686 (764)
T TIGR02865 661 SFIKRGAK-----VEVIRSSNLP-------------------------------------------IGIL------DEVD 686 (764)
T ss_pred eEEEECCE-----EEEecCCCce-------------------------------------------eEec------cCCc
Confidence 99987543 5666533221 1211 1124
Q ss_pred ceEEEEEcCCCCeEEEEEcCCCCCCCCHHH-----HHHHHHc--CCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEE
Q 011209 309 PDISYRRLTDKDEFIVLATDGIWDVLSNEE-----VVEIVAS--APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCL 381 (491)
Q Consensus 309 Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~e-----i~~iv~~--~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv 381 (491)
+++...++.++| +|||+||||||..++.+ +.+++.+ ..+|++.++.|++.|.+... +...||+|++++
T Consensus 687 ~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~----~~~~DD~Tvlvi 761 (764)
T TIGR02865 687 VELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRS----GKIKDDMTVIVA 761 (764)
T ss_pred cceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcC----CCCCCCeEEEEE
Confidence 566778999999 88999999999887533 7777765 35899999999999987621 235899999999
Q ss_pred Ee
Q 011209 382 FL 383 (491)
Q Consensus 382 ~l 383 (491)
++
T Consensus 762 rv 763 (764)
T TIGR02865 762 KV 763 (764)
T ss_pred Ee
Confidence 86
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.31 E-value=3.3e-10 Score=106.52 Aligned_cols=123 Identities=20% Similarity=0.183 Sum_probs=82.9
Q ss_pred CcceEEEEEEe--CCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeecc
Q 011209 205 SGTTAVTLIKQ--GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLP 282 (491)
Q Consensus 205 sGTTavv~li~--~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~ 282 (491)
..+|+++++++ .+.++++|+|++++++++.++. ....+.....
T Consensus 60 ~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~---~~~~~~~~~~-------------------------------- 104 (193)
T PF07228_consen 60 RYATACYAIIDPETGTLTYANAGHPPPLLLRPGGR---EIEQLESEGP-------------------------------- 104 (193)
T ss_dssp TTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCT---EEEEETCSSB--------------------------------
T ss_pred ccceEEEEEecccceEEEEeCCCCCCEEEEecccc---ceeecccCcc--------------------------------
Confidence 57888888866 5679999999999999997431 1222221111
Q ss_pred CCCCCceeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHH-------HHHHHHHc--CCCHHHHH
Q 011209 283 NYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNE-------EVVEIVAS--APARSSAA 353 (491)
Q Consensus 283 ~~~~~gLa~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~-------ei~~iv~~--~~~~~~aA 353 (491)
.+|-+. ...+....+++.++| .|+|+||||+|.+..+ .+.+++.. ..++++.+
T Consensus 105 -----------~lG~~~------~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 166 (193)
T PF07228_consen 105 -----------PLGIFE------DIDYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEII 166 (193)
T ss_dssp -----------BCSSSC------TTCEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHH
T ss_pred -----------ceeeec------cccccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHH
Confidence 033221 123456678999999 7899999999998543 34566763 45789999
Q ss_pred HHHHHHHHHhhhhcCCCCCccceEEEEEEeC
Q 011209 354 RSLVESAVRAWRRKYPTSKVDDCAVVCLFLD 384 (491)
Q Consensus 354 ~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 384 (491)
+.|++.+.+. ..+...||+||||+++.
T Consensus 167 ~~l~~~~~~~----~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 167 DALLEAIDRF----GKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHH----TTSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHh----cCCCCCCceEEEEEEEC
Confidence 9999999883 22368999999999863
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.04 E-value=0.00075 Score=70.47 Aligned_cols=125 Identities=19% Similarity=0.207 Sum_probs=86.1
Q ss_pred CcceEEEEEEe--CCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeecc
Q 011209 205 SGTTAVTLIKQ--GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLP 282 (491)
Q Consensus 205 sGTTavv~li~--~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~ 282 (491)
+=+|+...+++ .+.+..+|+|---+++.+.+++- ....|+
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~--~~~~l~------------------------------------ 272 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI--EVEDLT------------------------------------ 272 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc--eeEEcc------------------------------------
Confidence 56677666665 57899999999999999876521 011121
Q ss_pred CCCCCceeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCC-------CCCHHHHHHHHHc--CCCHHHHH
Q 011209 283 NYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWD-------VLSNEEVVEIVAS--APARSSAA 353 (491)
Q Consensus 283 ~~~~~gLa~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD-------~Ls~~ei~~iv~~--~~~~~~aA 353 (491)
+...++|.. -...+.+....+.++| .|||.||||.+ .+..+...+++.. ..++++++
T Consensus 273 -------~~g~piG~~------~~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 338 (367)
T COG2208 273 -------ALGLPIGLL------PDYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEIL 338 (367)
T ss_pred -------CCCceeeec------CCccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHH
Confidence 122334533 2224466778899988 88999999999 5667777888773 35788888
Q ss_pred HHHHHHHHHhhhhcCCCCCccceEEEEEEeC
Q 011209 354 RSLVESAVRAWRRKYPTSKVDDCAVVCLFLD 384 (491)
Q Consensus 354 ~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 384 (491)
+.+.+.....-. .....||+|+|++++.
T Consensus 339 ~~i~~~l~~~~~---~~~~~DDiTll~lk~~ 366 (367)
T COG2208 339 EAILESLEELQG---DQIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHHHHHHhhC---CccccCceEEEEEEec
Confidence 888887776611 1246788999999875
No 20
>PF06324 Pigment_DH: Pigment-dispersing hormone (PDH); InterPro: IPR009396 This family consists of several eukaryotic pigment-dispersing hormone (PDH) proteins. The pigment-dispersing hormone (PDH) is produced in the eyestalks of Crustacea where it induces light-adapting movements of pigment in the compound eye and regulates the pigment dispersion in the chromatophores [].; GO: 0005179 hormone activity, 0009416 response to light stimulus, 0005576 extracellular region
Probab=42.34 E-value=6 Score=22.67 Aligned_cols=13 Identities=38% Similarity=0.726 Sum_probs=10.5
Q ss_pred ccccccCCCCCCC
Q 011209 468 VNTLLTLPRFTPG 480 (491)
Q Consensus 468 ~~~~~~~~~~~~~ 480 (491)
+||||.||+....
T Consensus 5 INslLglpk~m~d 17 (18)
T PF06324_consen 5 INSLLGLPKVMND 17 (18)
T ss_pred HHHHHcchhhccc
Confidence 6999999997643
No 21
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=22.90 E-value=3e+02 Score=24.07 Aligned_cols=52 Identities=8% Similarity=0.238 Sum_probs=37.3
Q ss_pred ceecceEEEEEcCCCCeEEEEEcCCCCC-------CCCHHHHHHHHHcCC-CHHHHHHHH
Q 011209 305 LISVPDISYRRLTDKDEFIVLATDGIWD-------VLSNEEVVEIVASAP-ARSSAARSL 356 (491)
Q Consensus 305 v~~~Pdv~~~~L~~~D~fLVLaSDGlwD-------~Ls~~ei~~iv~~~~-~~~~aA~~L 356 (491)
++..|+|+.......+.|+|.+..-.-+ .+++++|.-++.++. +.++|-+.|
T Consensus 39 Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~gvs~~~A~~AL 98 (115)
T PRK06369 39 VFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQTGVSEEEARKAL 98 (115)
T ss_pred EEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHHCcCHHHHHHHH
Confidence 8999999998988888899988876654 467777766665543 444444443
No 22
>PRK10693 response regulator of RpoS; Provisional
Probab=20.34 E-value=8.7e+02 Score=24.27 Aligned_cols=42 Identities=12% Similarity=0.055 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCceeEE
Q 011209 186 AFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDSRAVL 231 (491)
Q Consensus 186 a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDSRa~L 231 (491)
.+..+|+.+....... --|++.++++ .+.|.++|.|-...++
T Consensus 210 ~l~~lN~~l~~~~~~~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~ 253 (303)
T PRK10693 210 LLKQVNHLLRQANLPG----QFPLLVGYYHRELKNLILVSAGLNATLN 253 (303)
T ss_pred HHHHHHHHHHhcCCCc----eeeEEEEEEEcCCCeEEEEeCCCCCEEe
Confidence 3445566665442111 1477777776 4579999999999884
Done!