Query 011209
Match_columns 491
No_of_seqs 266 out of 1609
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 03:24:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011209.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011209hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kdj_B Protein phosphatase 2C 100.0 2.8E-47 9.7E-52 386.4 27.3 262 62-388 8-309 (316)
2 3qn1_B Protein phosphatase 2C 100.0 1.4E-47 4.7E-52 392.2 25.0 268 61-387 12-331 (337)
3 2iq1_A Protein phosphatase 2C 100.0 5.1E-47 1.7E-51 376.9 28.3 251 65-388 10-266 (274)
4 2p8e_A PPM1B beta isoform vari 100.0 1.5E-47 5.2E-52 386.9 24.7 263 64-388 25-302 (307)
5 2i0o_A Ser/Thr phosphatase; be 100.0 9.2E-47 3.1E-51 380.6 23.0 252 64-384 24-304 (304)
6 2j4o_A Mitogen-activated prote 100.0 1.3E-47 4.5E-52 401.1 16.3 264 65-389 29-371 (401)
7 1a6q_A Phosphatase 2C; catalyt 100.0 5.3E-46 1.8E-50 386.5 26.3 258 64-388 23-296 (382)
8 2i44_A Serine-threonine phosph 100.0 6.8E-46 2.3E-50 377.0 26.5 275 65-385 24-322 (324)
9 2irm_A Mitogen-activated prote 100.0 4.7E-47 1.6E-51 391.3 17.9 275 42-385 4-357 (358)
10 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.8E-45 6.2E-50 380.2 26.0 247 64-387 14-336 (364)
11 4da1_A Protein phosphatase 1K, 100.0 4.9E-45 1.7E-49 380.2 27.3 251 65-388 124-380 (389)
12 2pnq_A [pyruvate dehydrogenase 100.0 9.4E-46 3.2E-50 393.4 19.6 309 63-385 37-456 (467)
13 3d8k_A PP2C, protein phosphata 100.0 2.1E-45 7E-50 381.3 19.1 245 65-388 15-328 (377)
14 2pk0_A Serine/threonine protei 100.0 5.9E-39 2E-43 313.4 23.6 238 65-385 8-247 (250)
15 1txo_A Putative bacterial enzy 100.0 3.9E-38 1.3E-42 305.2 20.3 228 65-385 7-237 (237)
16 2j82_A TPPHA, protein serine-t 100.0 6.7E-38 2.3E-42 303.9 21.3 233 65-383 3-240 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 1.7E-37 5.9E-42 300.1 20.4 222 65-383 8-233 (234)
18 3rnr_A Stage II sporulation E 100.0 8.4E-34 2.9E-38 271.2 9.6 198 91-383 8-211 (211)
19 3t91_A Stage II sporulation pr 99.8 8.4E-19 2.9E-23 170.0 18.4 199 70-387 16-223 (242)
20 3pu9_A Protein serine/threonin 99.8 3.9E-17 1.3E-21 158.8 24.9 199 71-388 20-228 (242)
21 3zt9_A Serine phosphatase; hyd 99.6 3E-14 1E-18 133.7 18.9 177 73-382 15-193 (193)
22 3f79_A Probable two-component 99.6 1.4E-14 4.9E-19 141.3 16.7 195 74-384 48-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.0 2.2E-08 7.6E-13 104.0 22.6 127 203-386 116-259 (399)
24 3eq2_A Probable two-component 98.2 1.9E-05 6.4E-10 81.1 14.5 67 310-384 319-392 (394)
25 3out_A Glutamate racemase; str 20.3 48 0.0016 31.7 2.5 23 95-119 9-32 (268)
No 1
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=2.8e-47 Score=386.41 Aligned_cols=262 Identities=31% Similarity=0.472 Sum_probs=219.3
Q ss_pred cceeEeeeccCCCCCCCcceeeecccCC-------------CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhh
Q 011209 62 SEIASLFTQQGKKGTNQDAMIVWENFAS-------------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVN 128 (491)
Q Consensus 62 s~~~~~~s~~G~R~~NEDa~~v~~~~~~-------------~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~ 128 (491)
-..+++.|++|+|..|||++++..++.. ..+..||+|||||| |+.+++++++.++..|...+...
T Consensus 8 ~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~G--G~~~~~~as~~~~~~l~~~~~~~ 85 (316)
T 3kdj_B 8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVANYCRERMHLALAEEIAKE 85 (316)
T ss_dssp --CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHHHHhh
Confidence 3467889999999999999999776532 23678999999999 99999999999999998876543
Q ss_pred cchhHHHHHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcce
Q 011209 129 ITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTT 208 (491)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTT 208 (491)
..... ........+++++.++|..+++++.... ...+|||
T Consensus 86 ~~~~~-------------------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~GtT 125 (316)
T 3kdj_B 86 KPMLS-------------------------------------DGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGST 125 (316)
T ss_dssp CCCGG-------------------------------------GTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEEC
T ss_pred hcccc-------------------------------------cccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCCc
Confidence 22100 0112335678899999999999885432 3579999
Q ss_pred EEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCc
Q 011209 209 AVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPG 288 (491)
Q Consensus 209 avv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~g 288 (491)
++++++.++++|++||||||+|++|+++ +++||.||++..+.|+.||.+.+|.+.... ..|+ .+.
T Consensus 126 ~~~~~i~~~~l~vanvGDSR~yl~r~g~-----~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~----~~r~------~g~ 190 (316)
T 3kdj_B 126 SVVAVVFPSHIFVANCGDSRAVLCRGKT-----ALPLSVDHKPDREDEAARIEAAGGKVIQWN----GARV------FGV 190 (316)
T ss_dssp EEEEEECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEESS----SEEE------TTT
T ss_pred EEEEEEECCEEEEEEccCCEEEEEECCE-----ecccCCCCCCCCHHHHHHHHHcCCeEEecC----CceE------cce
Confidence 9999999999999999999999999765 999999999999999999999999886532 2455 788
Q ss_pred eeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc-----------------------
Q 011209 289 LAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS----------------------- 345 (491)
Q Consensus 289 La~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~----------------------- 345 (491)
|++||+|||+.+|++ ++++|++..+.+.+.++|||||||||||+|+++||++++..
T Consensus 191 l~~sRalGd~~~~~~-~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (316)
T 3kdj_B 191 LAMSRSIGDRYLKPS-IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERR 269 (316)
T ss_dssp BSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC---------------
T ss_pred eccccccCccccCCC-cCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhcccccccccccccccccc
Confidence 999999999999987 99999999999666666999999999999999999999976
Q ss_pred ----CCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCCCC
Q 011209 346 ----APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSN 388 (491)
Q Consensus 346 ----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~~ 388 (491)
..+++.+|+.|++.|+.+ |+.||||||||+|.....
T Consensus 270 ~~~~~~~~~~aa~~Lv~~A~~~-------g~~DNiTvivv~l~~~~~ 309 (316)
T 3kdj_B 270 KEGKDPAAMSAAEYLSKLAIQR-------GSKDNISVVVVDLKPRRK 309 (316)
T ss_dssp --CCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECSCC--
T ss_pred ccccCchHHHHHHHHHHHHHHc-------CCCCCeEEEEEEccCCCc
Confidence 245789999999999999 999999999999986644
No 2
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=1.4e-47 Score=392.21 Aligned_cols=268 Identities=32% Similarity=0.468 Sum_probs=222.4
Q ss_pred CcceeEeeeccCCCCCCCcceeeecccCC------------------CCCceEEEEecCCCCChHHHHHHHHHHHHHHHH
Q 011209 61 SSEIASLFTQQGKKGTNQDAMIVWENFAS------------------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLS 122 (491)
Q Consensus 61 ~s~~~~~~s~~G~R~~NEDa~~v~~~~~~------------------~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~ 122 (491)
....+++.+.+|+|..|||++++..+|.. ..+..||||||||| |+.+++++++.++..|.
T Consensus 12 ~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l~ 89 (337)
T 3qn1_B 12 CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLHFALA 89 (337)
T ss_dssp CSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHHHHHH
T ss_pred ccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHHHHHHH
Confidence 33456788999999999999999876532 12578999999999 99999999999999998
Q ss_pred hhhhhhcchhHHHHHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhh----
Q 011209 123 SHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHA---- 198 (491)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~---- 198 (491)
..+........ . ..........++++|.++|..+|+++....
T Consensus 90 ~~~~~~~~~~~----------------------------~------~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~ 135 (337)
T 3qn1_B 90 EEIERIKDELC----------------------------K------RNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 135 (337)
T ss_dssp HHHHHTC----------------------------------------------CHHHHHHHHHHHHHHHHHHHTSSCBCC
T ss_pred HHHHhhhhhhh----------------------------c------cccccchHHHHHHHHHHHHHHhhHHHHhhhhccc
Confidence 87654322100 0 000001124578899999999999997654
Q ss_pred ---------ccccCCCcceEEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEe
Q 011209 199 ---------TIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFA 269 (491)
Q Consensus 199 ---------~~d~~~sGTTavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~ 269 (491)
......+|||++++++.++++|++||||||+||+|+++ +++||.||+|..+.|+.||.+.+|.+..
T Consensus 136 ~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~-----~~~lT~DH~~~~~~e~~ri~~~gg~v~~ 210 (337)
T 3qn1_B 136 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ 210 (337)
T ss_dssp TTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred cccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCE-----eeeecCCCCCCCHHHHHHHHHcCCeEEe
Confidence 12245799999999999999999999999999999765 9999999999999999999999999865
Q ss_pred ecCCCcceeeeccCCCCCceeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----
Q 011209 270 LHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS---- 345 (491)
Q Consensus 270 ~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~---- 345 (491)
.. ..|+ .+.|+++|+|||+.+|++ ++++|++..+.+.+.++|||||||||||+|+++||++++..
T Consensus 211 ~~----~~r~------~g~l~~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~ 279 (337)
T 3qn1_B 211 WQ----GARV------FGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILM 279 (337)
T ss_dssp SS----SEEE------TTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHH
T ss_pred cC----Ccee------cCccccccccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhh
Confidence 32 2455 788999999999999998 99999999999977777999999999999999999999976
Q ss_pred -----------------CCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCCC
Q 011209 346 -----------------APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNS 387 (491)
Q Consensus 346 -----------------~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~ 387 (491)
..+++.+|+.|++.|+.+ |+.||||||||+|....
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~ 331 (337)
T 3qn1_B 280 WHKKNGAPPLAERGKGIDPACQAAADYLSMLALQK-------GSKDNISIIVIDLKAQR 331 (337)
T ss_dssp HHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECCSCC
T ss_pred hccccccccccccccccChhHHHHHHHHHHHHHHc-------CCCCCEEEEEEEecCCc
Confidence 456789999999999999 99999999999998654
No 3
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.1e-47 Score=376.88 Aligned_cols=251 Identities=30% Similarity=0.440 Sum_probs=211.8
Q ss_pred eEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccC
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 144 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
++++|++|+|..|||++++... .++..||+|||||| |+.+|+++++.++..|...+...
T Consensus 10 ~g~~s~~G~R~~nED~~~~~~~---~~~~~l~~V~DG~G--G~~~a~~as~~~~~~l~~~~~~~---------------- 68 (274)
T 2iq1_A 10 VGCASQIGKRKENEDRFDFAQL---TDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKE---------------- 68 (274)
T ss_dssp CEEEEECCSSSSCCEEEEEEEC---SSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTC----------------
T ss_pred EEEEecccCCCCccceEEEeeC---CCCeEEEEEECCCC--CHHHHHHHHHHHHHHHHHHhccc----------------
Confidence 4567999999999999998642 25778999999999 99999999999998887643210
Q ss_pred CccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc----cccCCCcceEEEEEEeC-CeE
Q 011209 145 SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT----IDCFCSGTTAVTLIKQG-QHL 219 (491)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~----~d~~~sGTTavv~li~~-~~L 219 (491)
..+.++|.++|..+++.+..... .....+|||++++++.+ .++
T Consensus 69 --------------------------------~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l 116 (274)
T 2iq1_A 69 --------------------------------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIEL 116 (274)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEE
T ss_pred --------------------------------ccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEE
Confidence 01445677788888888766542 23567999999999874 689
Q ss_pred EEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccc
Q 011209 220 VIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFC 299 (491)
Q Consensus 220 ~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~ 299 (491)
|++||||||+|++++++ +++||.||+|..+.|+.||.+++|.|... +....|+ .+.+++||||||+.
T Consensus 117 ~~anvGDSR~~l~r~g~-----~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~--~~~~~~~------~~~~~ltralGd~~ 183 (274)
T 2iq1_A 117 VVASVGDSRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWN--SLGQPHV------NGRLAMTRSIGDLD 183 (274)
T ss_dssp EEEEESSCEEEEEETTE-----EEECCCCCCTTSHHHHHHHHHTTCCEEEC--TTSCEEE------TTTBSCSBCEECGG
T ss_pred EEEEecCceEEEEeCCE-----eeECCCCCCCcCHHHHHHHHHcCCEEEcC--CCCceeE------CCeEeeccccCChh
Confidence 99999999999999765 99999999999999999999999988642 2222344 56789999999999
Q ss_pred cCCCCceecceEEEEEcCCC-CeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEE
Q 011209 300 LKDFGLISVPDISYRRLTDK-DEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAV 378 (491)
Q Consensus 300 lK~~gv~~~Pdv~~~~L~~~-D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTv 378 (491)
+|+++++++|++..++|.++ |+|||||||||||+|+++||++++....+++++|+.|++.|+.+ ++.||+||
T Consensus 184 ~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L~~~A~~~-------g~~DNiTv 256 (274)
T 2iq1_A 184 LKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-------GTEDNSTA 256 (274)
T ss_dssp GTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHHHHHHHHT-------TCCSCEEE
T ss_pred hccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHc-------CCCCCeEE
Confidence 99999999999999999985 57999999999999999999999999889999999999999998 89999999
Q ss_pred EEEEeCCCCC
Q 011209 379 VCLFLDSNSN 388 (491)
Q Consensus 379 Ivv~l~~~~~ 388 (491)
||++|.....
T Consensus 257 ivv~~~~~~~ 266 (274)
T 2iq1_A 257 VVVPFGAWGK 266 (274)
T ss_dssp EEEECTTC--
T ss_pred EEEEccCCCC
Confidence 9999986543
No 4
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=1.5e-47 Score=386.91 Aligned_cols=263 Identities=29% Similarity=0.404 Sum_probs=213.0
Q ss_pred eeEeeeccCCCCCCCcceeeecccCC-CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccc
Q 011209 64 IASLFTQQGKKGTNQDAMIVWENFAS-RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINT 142 (491)
Q Consensus 64 ~~~~~s~~G~R~~NEDa~~v~~~~~~-~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 142 (491)
.++++|++|+|..|||++++..++.. ..+..||+|||||| |+.+|+++++.++..|............
T Consensus 25 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~~~~~~~~--------- 93 (307)
T 2p8e_A 25 RYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRVANYCSTHLLEHITTNEDFRAAGKS--------- 93 (307)
T ss_dssp EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSTTTC--------------
T ss_pred eEEEEecCCCCCcccceEEEEecCCCCCCCeEEEEEECCCC--CHHHHHHHHHHHHHHHHhhHhhhhcccc---------
Confidence 45678999999999999998766532 13578999999999 9999999999999988752111000000
Q ss_pred cCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCcceEEEEEEeCCeEE
Q 011209 143 AGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATI--DCFCSGTTAVTLIKQGQHLV 220 (491)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~--d~~~sGTTavv~li~~~~L~ 220 (491)
.+ ........+.++|.++|..+++.+...... ....+|||++++++.++++|
T Consensus 94 ----------------~~----------~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~ 147 (307)
T 2p8e_A 94 ----------------GS----------ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIY 147 (307)
T ss_dssp --------------------------------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEE
T ss_pred ----------------cc----------cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEE
Confidence 00 000112346788999999999999775432 24679999999999999999
Q ss_pred EEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeeccccccccc
Q 011209 221 IGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCL 300 (491)
Q Consensus 221 vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~l 300 (491)
++||||||+||+++++ +++||.||+|..+.|+.||.+.||.+.. .|+ ++.|++||||||+.+
T Consensus 148 vanvGDSRa~l~r~g~-----~~~lT~DH~~~~~~E~~rI~~~gg~v~~-------~rv------~g~l~ltRalGd~~~ 209 (307)
T 2p8e_A 148 FINCGDSRAVLYRNGQ-----VCFSTQDHKPCNPREKERIQNAGGSVMI-------QRV------NGSLAVSRALGDYDY 209 (307)
T ss_dssp EEEESSCEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGG
T ss_pred EEEccCcEEEEEECCc-----cccCCCCCCCCCHHHHHHHHHcCCEEEe-------Ccc------cCeEeccccccCHHH
Confidence 9999999999999765 8999999999999999999999998752 355 677999999999998
Q ss_pred CCCC--------ceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhhhhcC
Q 011209 301 KDFG--------LISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRAWRRKY 368 (491)
Q Consensus 301 K~~g--------v~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~ 368 (491)
|..+ ++++|++..+.+.++|.|||||||||||+|+++||++++.. ..+++.+|+.|++.|+.+
T Consensus 210 k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~----- 284 (307)
T 2p8e_A 210 KCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHK----- 284 (307)
T ss_dssp SCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-----
T ss_pred hcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----
Confidence 8642 78999999999999998999999999999999999999987 578999999999999998
Q ss_pred CCCCccceEEEEEEeCCCCC
Q 011209 369 PTSKVDDCAVVCLFLDSNSN 388 (491)
Q Consensus 369 ~~g~~DNiTvIvv~l~~~~~ 388 (491)
++.|||||||+++...+.
T Consensus 285 --g~~DNiTvivv~~~~~~~ 302 (307)
T 2p8e_A 285 --GSRDNMSIVLVCFSNEGH 302 (307)
T ss_dssp --TCCSCEEEEEEEC-----
T ss_pred --CCCCCeEEEEEECCCCCc
Confidence 999999999999987654
No 5
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=9.2e-47 Score=380.57 Aligned_cols=252 Identities=31% Similarity=0.428 Sum_probs=203.1
Q ss_pred eeEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 64 IASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 64 ~~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
.+++.|.+|+|..|||++++..++. .+..||+|||||| |+.+|+++++.++..|........
T Consensus 24 ~~~~~s~~G~R~~nED~~~~~~~~~--~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~~~~-------------- 85 (304)
T 2i0o_A 24 ASGSSSMQGWRISQEDAHNCILNFD--DQCSFFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYGR-------------- 85 (304)
T ss_dssp EEEEEEEEESSSCCCEEEEEEEEEE--TTEEEEEEEECSS--CSHHHHHHHHHHHHHHHHSHHHHT--------------
T ss_pred EEEEeecCCCCCCccCEEEEEeccC--CCeEEEEEEcCCC--CHHHHHHHHHHHHHHHHhhhhccc--------------
Confidence 4666899999999999999876543 4778999999999 999999999999998876432110
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhh----------------ccccCCCcc
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHA----------------TIDCFCSGT 207 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~----------------~~d~~~sGT 207 (491)
..+.++|.++|..+++.+.... ......+||
T Consensus 86 ---------------------------------~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 132 (304)
T 2i0o_A 86 ---------------------------------KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGC 132 (304)
T ss_dssp ---------------------------------TCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEE
T ss_pred ---------------------------------ccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCc
Confidence 1145677778888888765422 112567999
Q ss_pred eEEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCC
Q 011209 208 TAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSP 287 (491)
Q Consensus 208 Tavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~ 287 (491)
|++++++.++++|++||||||+||+++++ +++||.||+|..+.|+.||.+.+|.+.. ..|+ ++
T Consensus 133 T~~~~~i~~~~l~vanvGDSRa~l~r~g~-----~~~LT~DH~~~~~~e~~rI~~~gg~v~~------~~rv------~g 195 (304)
T 2i0o_A 133 TAVVALLHGKDLYVANAGDSRCVVCRNGK-----ALEMSFDHKPEDTVEYQRIEKAGGRVTL------DGRV------NG 195 (304)
T ss_dssp EEEEEEEETTEEEEEEESSCEEEEEETTE-----EEECCCCCCTTSHHHHHHHHHTTCCBCT------TSCB------TT
T ss_pred cEEEEEEECCEEEEEEccCcEEEEEECCE-----EEEcCCCcCCcCHHHHHHHHhCCCEEEe------CCeE------cC
Confidence 99999999999999999999999999765 9999999999999999999999997631 1244 67
Q ss_pred ceeecccccccccCCC--------CceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc-----CCCHHHHHH
Q 011209 288 GLAMARAFGDFCLKDF--------GLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS-----APARSSAAR 354 (491)
Q Consensus 288 gLa~tRalGD~~lK~~--------gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~-----~~~~~~aA~ 354 (491)
.+++||||||+.+|.. .|+++|++..++|.++|.|||||||||||+|+++||++++.. ..+++.+|+
T Consensus 196 ~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~ 275 (304)
T 2i0o_A 196 GLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICE 275 (304)
T ss_dssp SCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHH
T ss_pred ceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 8999999999998853 478999999999999999999999999999999999999986 578999999
Q ss_pred HHHHHHHHhhhhcCCCCCccceEEEEEEeC
Q 011209 355 SLVESAVRAWRRKYPTSKVDDCAVVCLFLD 384 (491)
Q Consensus 355 ~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~ 384 (491)
.|++.|+.+|... ..++.|||||||++|+
T Consensus 276 ~L~~~a~~~~~~g-~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 276 ELFDHCLAPHTRG-DGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHHHHHC-------------CEEEEEEEEC
T ss_pred HHHHHHHHhhhcc-CCCCCCCeEEEEEEeC
Confidence 9999999876321 1268899999999984
No 6
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1.3e-47 Score=401.07 Aligned_cols=264 Identities=20% Similarity=0.311 Sum_probs=208.5
Q ss_pred eEeeeccCCCC--------CCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhh-hhhhcchhHHH
Q 011209 65 ASLFTQQGKKG--------TNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSH-WEVNITSEEVL 135 (491)
Q Consensus 65 ~~~~s~~G~R~--------~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~-~~~~~~~~~~~ 135 (491)
+++++++|.|. .|||++++.. ...+..||||||||| |+.+|+++++.|+..|... +....
T Consensus 29 ~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~~~~~------ 97 (401)
T 2j4o_A 29 VGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEH------ 97 (401)
T ss_dssp EEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEES--SSHHHHHHHHHHHHTTSSSSCCTTS------
T ss_pred eeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCC--CHHHHHHHHHHHHHHHHHhhhhccc------
Confidence 34456777766 5999999854 235788999999999 9999999999998877532 11000
Q ss_pred HHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc----------------
Q 011209 136 REISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT---------------- 199 (491)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~---------------- 199 (491)
....+.++|.++|..+++.+.....
T Consensus 98 ---------------------------------------~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g 138 (401)
T 2j4o_A 98 ---------------------------------------AEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEG 138 (401)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ---------------------------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccc
Confidence 0123456666677766666543210
Q ss_pred --------------------cccCCCcceEEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHH
Q 011209 200 --------------------IDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAER 259 (491)
Q Consensus 200 --------------------~d~~~sGTTavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~R 259 (491)
.....+|||++++++.+++||||||||||+||++.+.+| +.+++||.||+|..+.|++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g-~~~~~LT~DH~~~~~~E~~R 217 (401)
T 2j4o_A 139 VPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDG-LQVTQLNVDHTTENEDELFR 217 (401)
T ss_dssp CCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSS-EEEEECSCCCSTTSHHHHHH
T ss_pred ccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEEEccCceEEEEEcCCCC-ceEEECCCCCCCCCHHHHHH
Confidence 013468999999999999999999999999999988544 66999999999999999999
Q ss_pred HHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCC-------------CCceecceEEE-EEcCCCCeEEEE
Q 011209 260 IRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD-------------FGLISVPDISY-RRLTDKDEFIVL 325 (491)
Q Consensus 260 i~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~-------------~gv~~~Pdv~~-~~L~~~D~fLVL 325 (491)
|.+.||.+.... ..|+ +|+|++||||||+.+|. .+++++|||.. +.|.++|.||||
T Consensus 218 i~~~Gg~v~~~~----~~r~------~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvL 287 (401)
T 2j4o_A 218 LSQLGLDAGKIK----QVGI------ICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVL 287 (401)
T ss_dssp HHTTTCCHHHHH----HHCC------BTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEE
T ss_pred HHHcCCCeeecc----Cccc------cCCcccccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEE
Confidence 999999752211 1233 78899999999998773 46999999996 999999999999
Q ss_pred EcCCCCCCC--------CHHHHHHHHHc----CCCHHHHHHHHHHHHHHhhhhcCCCCC--------ccceEEEEEEeCC
Q 011209 326 ATDGIWDVL--------SNEEVVEIVAS----APARSSAARSLVESAVRAWRRKYPTSK--------VDDCAVVCLFLDS 385 (491)
Q Consensus 326 aSDGlwD~L--------s~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~--------~DNiTvIvv~l~~ 385 (491)
|||||||+| +++||+++|.. ..+++.+|+.|++.|++.|...|..|+ .||||||||+|..
T Consensus 288 aSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~ 367 (401)
T 2j4o_A 288 MSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGY 367 (401)
T ss_dssp ECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBC
T ss_pred EccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCC
Confidence 999999999 89999999987 478999999999999998755443354 8999999999987
Q ss_pred CCCC
Q 011209 386 NSNT 389 (491)
Q Consensus 386 ~~~~ 389 (491)
+...
T Consensus 368 ~~~~ 371 (401)
T 2j4o_A 368 PLGE 371 (401)
T ss_dssp CCC-
T ss_pred CCcc
Confidence 6544
No 7
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=5.3e-46 Score=386.46 Aligned_cols=258 Identities=29% Similarity=0.412 Sum_probs=215.8
Q ss_pred eeEeeeccCCCCCCCcceeeecccCC-CCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccc
Q 011209 64 IASLFTQQGKKGTNQDAMIVWENFAS-RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINT 142 (491)
Q Consensus 64 ~~~~~s~~G~R~~NEDa~~v~~~~~~-~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 142 (491)
.+++.|++|+|..|||++++..++.. ..+..||+|||||| |+.+|+++++.++..|..........
T Consensus 23 ~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~~~~~~----------- 89 (382)
T 1a6q_A 23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSA----------- 89 (382)
T ss_dssp EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSS-----------
T ss_pred EEEEEecCCCCCCCCceeEEecCCCCCCCCeEEEEEEcCCC--cHHHHHHHHHHHHHHHHhhhhhhccC-----------
Confidence 46678999999999999999776542 13578999999999 99999999999999887531111000
Q ss_pred cCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc--cccCCCcceEEEEEEeCCeEE
Q 011209 143 AGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT--IDCFCSGTTAVTLIKQGQHLV 220 (491)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~--~d~~~sGTTavv~li~~~~L~ 220 (491)
.......+.++|.++|..+++.+..... .....+|||++++++.++++|
T Consensus 90 -----------------------------~~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~ 140 (382)
T 1a6q_A 90 -----------------------------GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 140 (382)
T ss_dssp -----------------------------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEE
T ss_pred -----------------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEE
Confidence 0001134667888899999998876542 235679999999999999999
Q ss_pred EEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeeccccccccc
Q 011209 221 IGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCL 300 (491)
Q Consensus 221 vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~l 300 (491)
++||||||+||++.++ +++||.||+|..+.|++||.+.||.|.. .|+ ++.|++||||||+.+
T Consensus 141 vanvGDSRayl~r~g~-----~~~LT~DHs~~~~~E~~RI~~~gg~v~~-------~Rv------~g~l~ltRalGd~~~ 202 (382)
T 1a6q_A 141 FINCGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDY 202 (382)
T ss_dssp EEEESSCEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGG
T ss_pred EEEcCCCeEEEEECCc-----eEEeCCCCCCCCHHHHHHHHhcCcEEec-------ccc------cCceeeeeecCcHhh
Confidence 9999999999999765 8999999999999999999999998752 355 678999999999999
Q ss_pred CCCC--------ceecceEEEEEcC-CCCeEEEEEcCCCCCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHhhhhc
Q 011209 301 KDFG--------LISVPDISYRRLT-DKDEFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRAWRRK 367 (491)
Q Consensus 301 K~~g--------v~~~Pdv~~~~L~-~~D~fLVLaSDGlwD~Ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~ 367 (491)
|..+ |+++|++..+.+. ++|+|||||||||||+|+++||++++.. ..+++.+|+.|++.|+.+
T Consensus 203 K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~---- 278 (382)
T 1a6q_A 203 KCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK---- 278 (382)
T ss_dssp SCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT----
T ss_pred cccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc----
Confidence 8643 6899999999999 8778999999999999999999999987 578999999999999988
Q ss_pred CCCCCccceEEEEEEeCCCCC
Q 011209 368 YPTSKVDDCAVVCLFLDSNSN 388 (491)
Q Consensus 368 ~~~g~~DNiTvIvv~l~~~~~ 388 (491)
++.||||||||+|...+.
T Consensus 279 ---g~~DNiTvivv~~~~~~~ 296 (382)
T 1a6q_A 279 ---GSRDNMSVILICFPNAPK 296 (382)
T ss_dssp ---TCCSCEEEEEEECTTSCC
T ss_pred ---CCcCCEEEEEEEecCCCC
Confidence 899999999999986543
No 8
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=6.8e-46 Score=377.04 Aligned_cols=275 Identities=29% Similarity=0.448 Sum_probs=212.3
Q ss_pred eEeeeccCCCCCCCcceeeecccC-CCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhh--hhhhcchhHHHHHhhcc
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFA-SRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSH--WEVNITSEEVLREISIN 141 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~-~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~--~~~~~~~~~~~~~~~~~ 141 (491)
++++|++|+|..|||++++..++. ...+..||+|||||| |+.+|+++++.++..|... +...... +.
T Consensus 24 ~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l~~~~~~~~~~~~---l~----- 93 (324)
T 2i44_A 24 AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISSPAWQEVTEM---LR----- 93 (324)
T ss_dssp EEEEEECTTSSSCCEEEEEESCCSTTCSSEEEEEEEEEES--SSHHHHHHHHHHHHHHHTCHHHHHHHHH---HT-----
T ss_pred EEEEECCCCCCccCCeEEEEecCCCCCCCeEEEEEeCCCC--chHHHHHHHHHHHHHHHhhhHHHHHHHH---hh-----
Confidence 567899999999999999875432 345788999999999 9999999999999999764 2211000 00
Q ss_pred ccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCCcceEEEEEEeCCeEE
Q 011209 142 TAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID-CFCSGTTAVTLIKQGQHLV 220 (491)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d-~~~sGTTavv~li~~~~L~ 220 (491)
..+ +..+........+.++|.++|..+++++....... ....|+|++++++.++++|
T Consensus 94 ---------~~~-------------~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~ 151 (324)
T 2i44_A 94 ---------SDV-------------PATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVA 151 (324)
T ss_dssp ---------SCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEE
T ss_pred ---------ccC-------------CccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEE
Confidence 000 00000000123467888899999999987665422 2344555555568999999
Q ss_pred EEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCc-ceeeeccCCCCCceeecccccc--
Q 011209 221 IGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPE-VARVWLPNYDSPGLAMARAFGD-- 297 (491)
Q Consensus 221 vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~-~~Rvwl~~~~~~gLa~tRalGD-- 297 (491)
++||||||+||++.+.++ +.+++||.||+|..+.|++||.++||.|......+. ..++ .+.|+++|||||
T Consensus 152 vanvGDSRa~l~r~~~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~------~g~l~~sra~Gd~p 224 (324)
T 2i44_A 152 VGHLGDSRIAMGVETPNG-LNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIR------GGDFSFRKSRGEQP 224 (324)
T ss_dssp EEEESSCEEEEEEEETTE-EEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEE------CTTHHHHHHTTCCC
T ss_pred EEEccCceEEEEeccCCC-ceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccc------cCcccchhhcCCcc
Confidence 999999999999974322 249999999999999999999999999865443322 1122 678999999999
Q ss_pred --ccc---------CCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcC----CCHHH--HHHHHHHHH
Q 011209 298 --FCL---------KDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA----PARSS--AARSLVESA 360 (491)
Q Consensus 298 --~~l---------K~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~----~~~~~--aA~~Lv~~A 360 (491)
+.+ +.++++++|++..++|.++|.|||||||||||+|+++||++++... .+++. +|+.|++.|
T Consensus 225 ~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A 304 (324)
T 2i44_A 225 MQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQ 304 (324)
T ss_dssp CCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 554 3566899999999999999989999999999999999999999865 68999 999999999
Q ss_pred HHhhhhcCCCCCccceEEEEEEeCC
Q 011209 361 VRAWRRKYPTSKVDDCAVVCLFLDS 385 (491)
Q Consensus 361 ~~~w~~~~~~g~~DNiTvIvv~l~~ 385 (491)
+.+ ++.|||||||++|..
T Consensus 305 ~~~-------g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 305 SRN-------QSADNITAMTVFFKK 322 (324)
T ss_dssp HTT-------CCCCCEEEEEEEEC-
T ss_pred Hhc-------CCCCCCEEEEEEeeC
Confidence 988 999999999999974
No 9
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-47 Score=391.30 Aligned_cols=275 Identities=22% Similarity=0.316 Sum_probs=217.5
Q ss_pred cccCCCCccccCCceeeCCCcceeEeeeccCCCC---CCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHH
Q 011209 42 DYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKG---TNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLP 118 (491)
Q Consensus 42 ~~~~~~~l~~~~~r~~~~g~s~~~~~~s~~G~R~---~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~ 118 (491)
.|+++.+++...|- |... .+.|+.+|+|. .|||++++.. ...+..||||||||| |+.+|+++++.|+
T Consensus 4 ~~~~~~~~~~~~~~----g~~~-~~~~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhG--G~~aa~~as~~l~ 73 (358)
T 2irm_A 4 SWTDDLKVCNQTGV----GEAI-NQIYKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHN--GVTVAENALQEMA 73 (358)
T ss_dssp CCGGGSCBCTTEEE----EEEC-CEEECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEES--CSHHHHHHHHHHH
T ss_pred CcccccccCCCCCC----cccc-cceeecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCC--CHHHHHHHHHHHH
Confidence 46666677765443 3222 35578899986 5999998864 235788999999999 9999999999999
Q ss_pred HHHHh-hhhhhcchhHHHHHhhccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 011209 119 LKLSS-HWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMH 197 (491)
Q Consensus 119 ~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~ 197 (491)
..|.. .+.... ....++++|.++|..+++.+...
T Consensus 74 ~~l~~~~l~~~~---------------------------------------------~~~~~~~~l~~a~~~~d~~i~~~ 108 (358)
T 2irm_A 74 AELLLGQLNVCN---------------------------------------------TDEAVKELIRQSFMSVEKGYFDS 108 (358)
T ss_dssp HHSSSSTTTTCC---------------------------------------------SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccc---------------------------------------------chhhHHHHHHHHHHHHHHHHHHH
Confidence 88864 221100 01245677888888888877542
Q ss_pred hc-------------------------------------cccCCCcceEEEEEEeCCeEEEEEeCCceeEEEEeCCCCce
Q 011209 198 AT-------------------------------------IDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSL 240 (491)
Q Consensus 198 ~~-------------------------------------~d~~~sGTTavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~ 240 (491)
.. .....+|||++++++.+++||||||||||+||++.+.+|.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r~~~~g~~ 188 (358)
T 2irm_A 109 INPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTL 188 (358)
T ss_dssp SHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEECCTTCSC
T ss_pred HHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEEecCCCce
Confidence 10 12346999999999999999999999999999998545656
Q ss_pred EEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCC-------------CCcee
Q 011209 241 VAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD-------------FGLIS 307 (491)
Q Consensus 241 ~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~-------------~gv~~ 307 (491)
.+++||.||+|..+.|++||.+.||.+.. .|+ .+.+ +||||||+.+|. .++++
T Consensus 189 ~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~-------~r~------~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~v~~ 254 (358)
T 2irm_A 189 TVTQLSVDHNLLNAEEAARLFRLGLMAQN-------FEG------VPLY-STRCIGNYLGKAGYKDCNFLSSATAEPVIF 254 (358)
T ss_dssp EEEECSCCCBTTSHHHHHHHHTTTCCGGG-------GTT------CTTC-BSBCEECHHHHTTGGGSSSSTTCSSCSSBC
T ss_pred eeEeCCCCCCCCCHHHHHHHHHcCCeEec-------cCc------CCEE-cccCCcCHHHhccccccccccccCCCCEec
Confidence 79999999999999999999999997642 222 3444 999999998774 46999
Q ss_pred cceEEE-EEcCCCCeEEEEEcCCCCCCCC----------HHHHHHHHHcC----CCHHHHHHHHHHHHHHhhhhc-----
Q 011209 308 VPDISY-RRLTDKDEFIVLATDGIWDVLS----------NEEVVEIVASA----PARSSAARSLVESAVRAWRRK----- 367 (491)
Q Consensus 308 ~Pdv~~-~~L~~~D~fLVLaSDGlwD~Ls----------~~ei~~iv~~~----~~~~~aA~~Lv~~A~~~w~~~----- 367 (491)
+|||.. ++|.++|.|||||||||||+|+ ++||+++|... .+++.+|+.|++.|++.|...
T Consensus 255 ~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~ 334 (358)
T 2irm_A 255 EPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLV 334 (358)
T ss_dssp CCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhcccc
Confidence 999995 9999999999999999999999 99999999874 689999999999998865321
Q ss_pred ---CCCC--CccceEEEEEEeCC
Q 011209 368 ---YPTS--KVDDCAVVCLFLDS 385 (491)
Q Consensus 368 ---~~~g--~~DNiTvIvv~l~~ 385 (491)
...| +.||||||||+|..
T Consensus 335 ~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 335 EEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp SSSCCCCCCEECCEEEEEEESCC
T ss_pred ccccccCCCCCCCeEEEEEeCCC
Confidence 1135 89999999999975
No 10
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-45 Score=380.21 Aligned_cols=247 Identities=28% Similarity=0.348 Sum_probs=204.2
Q ss_pred eeEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 64 IASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 64 ~~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
.++..|++|+|..|||++++..+|....+..||+|||||| |+.||++++++|+.+|.+.. .
T Consensus 14 ~~~~~s~~G~R~~nED~~~v~~~~~~~~~~~lf~VfDGHG--G~~as~~a~~~l~~~l~~~~----~------------- 74 (364)
T 2isn_A 14 TTVAATMLGRRPTDEDAILVSAPATSRPNVRIKAVFDGHA--GEATSQYCAKHAAKHLGKLS----E------------- 74 (364)
T ss_dssp EEEEEEECTTSSSCCEEEEEECC----CCEEEEEEEEEES--CSHHHHHHHHHHHHHHTTCS----S-------------
T ss_pred EEEEEEcCCCCCcCCCeeEEeccCCCCCCeEEEEEEECCC--CHHHHHHHHHHHHHHHHHhh----c-------------
Confidence 4567899999999999999988777667899999999999 99999999999998775321 0
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEeC-------
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQG------- 216 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~~------- 216 (491)
. ..+.+.++|..+|+.+...... ...+|||++++++.+
T Consensus 75 ----------------------------~------~~~~l~~a~~~~d~~i~~~~~~-~~~~GtT~v~~~i~~~~~p~~~ 119 (364)
T 2isn_A 75 ----------------------------F------TFAEVKKACLSLDAEIIRKLGP-KHVAGSTGIIVAIERLSAPVVE 119 (364)
T ss_dssp ----------------------------C------CHHHHHHHHHHHHHHHHHHHCS-SSCCEECEEEEEEEECSSCEEE
T ss_pred ----------------------------c------cHHHHHHHHHHHHHHHHHhccc-CCCCCcceehhhhhcccccccc
Confidence 0 0245677888888888655432 257899999988852
Q ss_pred -----------------------------------------------------CeEEEEEeCCceeEEEE-eCCCCceEE
Q 011209 217 -----------------------------------------------------QHLVIGNVGDSRAVLGT-RDKDDSLVA 242 (491)
Q Consensus 217 -----------------------------------------------------~~L~vaNVGDSRa~L~r-~~~d~~~~~ 242 (491)
.++|++||||||+||++ +++ +
T Consensus 120 ~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~-----~ 194 (364)
T 2isn_A 120 NVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGG-----L 194 (364)
T ss_dssp EEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSC-----E
T ss_pred ccccccccccccccchhhhhhhhhhhhhcccccccccccccccccccccccCccEEEEEECccCEEEEEeeCCE-----E
Confidence 38999999999999995 444 8
Q ss_pred EEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCC--------CCceecceEEEE
Q 011209 243 MQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD--------FGLISVPDISYR 314 (491)
Q Consensus 243 ~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~--------~gv~~~Pdv~~~ 314 (491)
+|||.||+|..+.|+.||.+.||.|... ..+|+ .+.|++||||||+.+|. .+++++||+..+
T Consensus 195 ~~LT~DH~~~~~~e~~rI~~~gG~v~~~----~~~rv------~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~ 264 (364)
T 2isn_A 195 TRLSKDHKPNHPTEASRIEKAGGSVETF----DVPRV------DGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQF 264 (364)
T ss_dssp EECCCCCCTTSHHHHHHHHHTTCCEEES----SSEEE------TTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEE
T ss_pred EEcCcCCCCCCHHHHHHHHHcCCeEecC----CCccc------CCceeeEEEecchhhccccccCcccCceEEEeEEEEE
Confidence 9999999999999999999999988652 33565 57789999999999884 458899999999
Q ss_pred EcCCCCeEEEEEcCCCCCCCC--HHHHHHHH-----HcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCCC
Q 011209 315 RLTDKDEFIVLATDGIWDVLS--NEEVVEIV-----ASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNS 387 (491)
Q Consensus 315 ~L~~~D~fLVLaSDGlwD~Ls--~~ei~~iv-----~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~ 387 (491)
.|.++| |||||||||||+|+ ++++.+++ ....+++.+|+.|++.|+.+ ++.||||||||+|....
T Consensus 265 ~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~~~~~~ 336 (364)
T 2isn_A 265 YALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDM-------NSQDNISVMLVAFHNQE 336 (364)
T ss_dssp EECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHT-------TCCSCEEEEEEEECSSC
T ss_pred ECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCEEEEEEEcCCCC
Confidence 999998 99999999999986 88888765 34568999999999999998 89999999999997654
No 11
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=4.9e-45 Score=380.22 Aligned_cols=251 Identities=30% Similarity=0.437 Sum_probs=211.8
Q ss_pred eEeeeccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccC
Q 011209 65 ASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 144 (491)
Q Consensus 65 ~~~~s~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 144 (491)
+++.|++|+|..|||++++... ..+..||+|||||| |+.+++++++.++..|...+....
T Consensus 124 ~g~~s~~G~R~~NED~~~~~~~---~~~~~l~~VaDG~G--G~~~g~~as~~~~~~l~~~~~~~~--------------- 183 (389)
T 4da1_A 124 VGCASQIGKRKENEDRFDFAQL---TDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEK--------------- 183 (389)
T ss_dssp CEEEEECTTSSSCCEEEEEEEC---SSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTCC---------------
T ss_pred EEEecCCCCCCCCcceeeeeec---CCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHHHhcccc---------------
Confidence 5678999999999999998642 25778999999999 999999999999998887653211
Q ss_pred CccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhc----cccCCCcceEEEEEEeCC-eE
Q 011209 145 SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT----IDCFCSGTTAVTLIKQGQ-HL 219 (491)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~----~d~~~sGTTavv~li~~~-~L 219 (491)
.+.+++.++|..+++.+..... .....+|||++++++.++ .+
T Consensus 184 ---------------------------------~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l 230 (389)
T 4da1_A 184 ---------------------------------NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIEL 230 (389)
T ss_dssp ---------------------------------CHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEE
T ss_pred ---------------------------------CHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeE
Confidence 1345667777777777765432 234568999999998865 89
Q ss_pred EEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccc
Q 011209 220 VIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFC 299 (491)
Q Consensus 220 ~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~ 299 (491)
|++||||||+||+|+++ +++||.||++..+.|++||...||.+..- .....|+ .+.+++||||||+.
T Consensus 231 ~vanvGDSRayl~r~g~-----~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~--~~~~~~~------~g~l~ltRalGd~~ 297 (389)
T 4da1_A 231 VVASVGDSRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWN--SLGQPHV------NGRLAMTRSIGDLD 297 (389)
T ss_dssp EEEEESSCEEEEEETTE-----EEECCCCCCTTSHHHHHHHHHHTCCEECC-----CCEE------TTTBSCSBCEECGG
T ss_pred EEEEeeccEEEEEECCE-----eEEeCCCCCCCCHHHHHHHHHcCCeEecc--cCCCccC------CCeEeeEeeeCChh
Confidence 99999999999999765 99999999999999999999999987532 2223344 67899999999999
Q ss_pred cCCCCceecceEEEEEcCCC-CeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEE
Q 011209 300 LKDFGLISVPDISYRRLTDK-DEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAV 378 (491)
Q Consensus 300 lK~~gv~~~Pdv~~~~L~~~-D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTv 378 (491)
+|.++++++|++..+.|.++ |+|||||||||||+|+++||++++....+++++|+.|++.|+.+ ++.|||||
T Consensus 298 ~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTv 370 (389)
T 4da1_A 298 LKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-------GTEDNSTA 370 (389)
T ss_dssp GGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHHHHHHHH-------TCCSCEEE
T ss_pred hccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHHc-------CCCCCeEE
Confidence 99999999999999999875 67999999999999999999999999889999999999999999 89999999
Q ss_pred EEEEeCCCCC
Q 011209 379 VCLFLDSNSN 388 (491)
Q Consensus 379 Ivv~l~~~~~ 388 (491)
|||+|.....
T Consensus 371 ivv~~~~~~~ 380 (389)
T 4da1_A 371 VVVPFGAWGK 380 (389)
T ss_dssp EEEEECCC--
T ss_pred EEEEecCCCC
Confidence 9999986544
No 12
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=9.4e-46 Score=393.35 Aligned_cols=309 Identities=27% Similarity=0.322 Sum_probs=209.5
Q ss_pred ceeEeeeccCC-CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHH--HHHh-
Q 011209 63 EIASLFTQQGK-KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEV--LREI- 138 (491)
Q Consensus 63 ~~~~~~s~~G~-R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~--~~~~- 138 (491)
-+..+.|.+|. |..|||++.+...+. .+..||||||||| |+.+|++|+++|+.+|...+......... ..+.
T Consensus 37 ~v~~~~s~~g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHG--G~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~ 112 (467)
T 2pnq_A 37 SILGFDSNRLPANAPIEDRRSATTCLQ--TRGMLLGVFDGHA--GCACSQAVSERLFYYIAVSLLPHETLLEIENAVESG 112 (467)
T ss_dssp SEEEEEEEEECCSSSCCEEEEEEEESS--SSCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC--
T ss_pred ceEEEEeeccCCCCCCCCceeeeeccC--CCcEEEEEECCCC--CHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcc
Confidence 35556666665 899999998876543 4678999999999 99999999999999998653100000000 0000
Q ss_pred hccccCCcc-cccccccc--CC--------cccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhcc-------
Q 011209 139 SINTAGSIN-SEDTSFVS--AD--------EEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATI------- 200 (491)
Q Consensus 139 ~~~~~~~~~-~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~------- 200 (491)
......... .....|.. +. ..|.+........ . ....+.++|.+||..+|++|......
T Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~--~-~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~ 189 (467)
T 2pnq_A 113 RALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGE--S-ADIDVKEALINAFKRLDNDISLEAQVGDPNSFL 189 (467)
T ss_dssp --CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHH
T ss_pred ccccccccccccccccchhhhhhhhhcchhhhhhhhccccccc--c-chhhHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence 000000000 00000000 00 0000000000000 0 00035678889999999988765421
Q ss_pred -----ccCCCcceEEEEEEeCCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCc
Q 011209 201 -----DCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPE 275 (491)
Q Consensus 201 -----d~~~sGTTavv~li~~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~ 275 (491)
+...+|||++++++.++.|||||||||||||++.+.+|.|.+++||.||+|.++.|++||.+.|+..-.
T Consensus 190 ~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~------ 263 (467)
T 2pnq_A 190 NYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEA------ 263 (467)
T ss_dssp HHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGH------
T ss_pred ccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCccc------
Confidence 345699999999999999999999999999999876677889999999999999999999999863200
Q ss_pred ceeeeccCCCCCceeecccccccccCC------------C--------------------CceecceEEEEEcCCCCeEE
Q 011209 276 VARVWLPNYDSPGLAMARAFGDFCLKD------------F--------------------GLISVPDISYRRLTDKDEFI 323 (491)
Q Consensus 276 ~~Rvwl~~~~~~gLa~tRalGD~~lK~------------~--------------------gv~~~Pdv~~~~L~~~D~fL 323 (491)
..++...+..|.|++||||||+.+|. + .++++|+|+.+.|.++|.||
T Consensus 264 -~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fL 342 (467)
T 2pnq_A 264 -KSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFL 342 (467)
T ss_dssp -HHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEE
T ss_pred -ceeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEE
Confidence 01112223377899999999998873 1 27999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCC------CH------------------------------HHHHHHHHHHHHHhhhh-
Q 011209 324 VLATDGIWDVLSNEEVVEIVASAP------AR------------------------------SSAARSLVESAVRAWRR- 366 (491)
Q Consensus 324 VLaSDGlwD~Ls~~ei~~iv~~~~------~~------------------------------~~aA~~Lv~~A~~~w~~- 366 (491)
|||||||||+|+++||+++|.... +| +.+|..||+.|+..|+.
T Consensus 343 VLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~G 422 (467)
T 2pnq_A 343 VLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFG 422 (467)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-----
T ss_pred EEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcC
Confidence 999999999999999999997642 23 56899999999988621
Q ss_pred --c-------------CCCCCccceEEEEEEeCC
Q 011209 367 --K-------------YPTSKVDDCAVVCLFLDS 385 (491)
Q Consensus 367 --~-------------~~~g~~DNiTvIvv~l~~ 385 (491)
. ..+...||||||||+|+.
T Consensus 423 e~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 423 AVDHERLSKMLSLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp --------------------CCSCEEEEEEEECH
T ss_pred cchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence 0 112358999999999963
No 13
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-45 Score=381.28 Aligned_cols=245 Identities=21% Similarity=0.288 Sum_probs=205.5
Q ss_pred eEeeeccCCCCCC-----CcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhh
Q 011209 65 ASLFTQQGKKGTN-----QDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREIS 139 (491)
Q Consensus 65 ~~~~s~~G~R~~N-----EDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~ 139 (491)
++.+|++|+|..| ||++++...+....+..||||||||| |+.+|+++++.|+..|.....
T Consensus 15 ~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~------------- 79 (377)
T 3d8k_A 15 CASATSRNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQ--GRHSAMWLAQNVMNYLNDLRD------------- 79 (377)
T ss_dssp HHHTTTCEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSS--SSHHHHHHHHHHHHHHTTCSS-------------
T ss_pred EEEEEccCCCCccccchhcceEEEecccCCCCCeEEEEEEcCCC--cHHHHHHHHHHHHHHHHHhcc-------------
Confidence 4456899999866 56667766665567889999999999 999999999999988854210
Q ss_pred ccccCCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe----
Q 011209 140 INTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ---- 215 (491)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~---- 215 (491)
...++|.++|..+|+++.... ..+|||++++++.
T Consensus 80 --------------------------------------~~~~al~~af~~~d~~l~~~~----~~~GtTa~~~~i~~~~~ 117 (377)
T 3d8k_A 80 --------------------------------------VNEEEITRQFERMDGDLRAAN----LPGGSSALIIFVRYEKK 117 (377)
T ss_dssp --------------------------------------SSHHHHHHHHHHHHHHHHHHT----CCCCBCEEEEEEEEESS
T ss_pred --------------------------------------cHHHHHHHHHHHHHHHHHhcc----cCCCCceEEEEEecccc
Confidence 013678889999999997664 3689999988875
Q ss_pred -----------------------------------------------CCeEEEEEeCCceeEEEEeCCCCceEEEEeccc
Q 011209 216 -----------------------------------------------GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVD 248 (491)
Q Consensus 216 -----------------------------------------------~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~D 248 (491)
+++|||+||||||+||+++++ +++||.|
T Consensus 118 ~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~-----~~~LT~D 192 (377)
T 3d8k_A 118 PTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLKSGRT-----AIHLSTP 192 (377)
T ss_dssp CCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCEEEEEEEEESSCEEEEEETTE-----EEESSCC
T ss_pred ccccccccccccccccccccccccccccccccceeeecccccccccCCCeEEEEEcccceEEEEECCE-----EEECCcC
Confidence 148999999999999999764 9999999
Q ss_pred CCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCC--------CCceecceEEEEEcCCCC
Q 011209 249 LKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD--------FGLISVPDISYRRLTDKD 320 (491)
Q Consensus 249 H~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~--------~gv~~~Pdv~~~~L~~~D 320 (491)
|+|..+.|+.||.+.||.+.... +..|| +++|++||||||+.+|. ..++++|||..+.|.++|
T Consensus 193 H~~~~~~E~~RI~~~gg~v~~~~---g~~rv------~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D 263 (377)
T 3d8k_A 193 HTASSHKERHRVQAAGGVFTTVN---GELLL------GGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGD 263 (377)
T ss_dssp CSSSSHHHHHHHHTTTCCEEECS---SSEEE------TTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTC
T ss_pred CCCCCHHHHHHHHHcCCEEEecC---CcEEE------cCceecceeecChhhhcccccccccCccccCCcEEEEEcCCCC
Confidence 99999999999999999876321 22455 78999999999999985 348899999999999998
Q ss_pred eEEEEEcCCCCCCCCHHHHHHHHHc-----CCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCCCC
Q 011209 321 EFIVLATDGIWDVLSNEEVVEIVAS-----APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSN 388 (491)
Q Consensus 321 ~fLVLaSDGlwD~Ls~~ei~~iv~~-----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~~ 388 (491)
|||||||||||+|+++|+++++.. ..+++.+|+.|++.|+.+ ++.||||||||+|.....
T Consensus 264 -~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~~~~~~~ 328 (377)
T 3d8k_A 264 -DIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKRR-------KVTKNISTFVRHLPESRT 328 (377)
T ss_dssp -EEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTTS-------SCCSCCCEEEEECCSSCC
T ss_pred -EEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHhc-------CCCCCEEEEEEEecCCcc
Confidence 899999999999999999886654 457899999999999988 999999999999976654
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=5.9e-39 Score=313.39 Aligned_cols=238 Identities=22% Similarity=0.314 Sum_probs=188.0
Q ss_pred eEeeeccCC-CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 65 ASLFTQQGK-KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 65 ~~~~s~~G~-R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
++..|++|+ |..|||++++.... .+..+|+|||||| |+.++++++..+...|...+.....
T Consensus 8 ~~~~s~~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~~~------------- 69 (250)
T 2pk0_A 8 ISLLTDIGQRRSNNQDFINQFENK---AGVPLIILADGMG--GHRAGNIASEMTVTDLGSDWAETDF------------- 69 (250)
T ss_dssp EEEEEECCTTCSCCCEEEEEEECT---TCCEEEEEEEEEC--TTTHHHHHHHHHHHHHHHHHTTCCC-------------
T ss_pred EEEecCCCCCCCcCCCceEeccCC---CCcEEEEEEeCCC--CcHHHHHHHHHHHHHHHHHHhhccc-------------
Confidence 556799999 99999999987653 3678999999999 8989999998888888733211100
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCCcceEEEEEEeCCeEEEE
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID-CFCSGTTAVTLIKQGQHLVIG 222 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d-~~~sGTTavv~li~~~~L~va 222 (491)
+ ....+.+++.++|..+++.+....... ...+|||++++++.+++++++
T Consensus 70 -----------------------------~-~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~a 119 (250)
T 2pk0_A 70 -----------------------------S-ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFA 119 (250)
T ss_dssp -----------------------------C-SHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEE
T ss_pred -----------------------------C-ChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEE
Confidence 0 012355677788888888887654433 456899999999999999999
Q ss_pred EeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCC
Q 011209 223 NVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKD 302 (491)
Q Consensus 223 NVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~ 302 (491)
|+||||+|++++++ +++||.||++..+ +...|+ +.. +..+. ....+++||+||++
T Consensus 120 nvGDsr~~l~r~g~-----~~~lt~dh~~~~~-----~~~~g~-i~~-----~~~~~-----~~~~~~ltralG~~---- 174 (250)
T 2pk0_A 120 HVGDSRIGIVRQGE-----YHLLTSDHSLVNE-----LVKAGQ-LTE-----EEAAS-----HPQKNIITQSIGQA---- 174 (250)
T ss_dssp EESSCEEEEEETTE-----EEECCCCCBHHHH-----HHHTTS-SCH-----HHHHT-----CCSCCCBSCCBSCS----
T ss_pred EeCCCeEEEEcCCc-----EEEeCCCCCHHHH-----HHHcCC-CCH-----HHHHh-----CCCcceEEeecCCC----
Confidence 99999999999664 8999999987433 223332 111 00010 12457899999997
Q ss_pred CCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEE
Q 011209 303 FGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF 382 (491)
Q Consensus 303 ~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~ 382 (491)
..++|++..++|.++| +||||||||||+|+++++.+++....+++.+|+.|++.|+.+ ++.||+||||++
T Consensus 175 --~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~a~~~-------g~~DniTvivv~ 244 (250)
T 2pk0_A 175 --NPVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHR-------GGLDNITVALVY 244 (250)
T ss_dssp --SCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHHHHHT-------TCCSCEEEEEEE
T ss_pred --CCccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEE
Confidence 4678999999999998 899999999999999999999998889999999999999988 889999999999
Q ss_pred eCC
Q 011209 383 LDS 385 (491)
Q Consensus 383 l~~ 385 (491)
+..
T Consensus 245 ~~~ 247 (250)
T 2pk0_A 245 VES 247 (250)
T ss_dssp ECC
T ss_pred eeC
Confidence 974
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=3.9e-38 Score=305.18 Aligned_cols=228 Identities=22% Similarity=0.266 Sum_probs=176.3
Q ss_pred eEeeeccCC-CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 65 ASLFTQQGK-KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 65 ~~~~s~~G~-R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
++..|++|+ |..|||++++ +..||+|||||| |+.+++++++.++..|...+.....
T Consensus 7 ~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~~~------------- 63 (237)
T 1txo_A 7 YAARSDRGLVRANNEDSVYA--------GARLLALADGMG--GHAAGEVASQLVIAALAHLDDDEPG------------- 63 (237)
T ss_dssp EEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEEC--TTTHHHHHHHHHHHHHGGGGSSCCC-------------
T ss_pred EEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCC--CcHHHHHHHHHHHHHHHHHhhhCCc-------------
Confidence 566799997 9999999976 235999999999 9999999999998888764321000
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCcceEEEEEEeCCeEEE
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATI--DCFCSGTTAVTLIKQGQHLVI 221 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~--d~~~sGTTavv~li~~~~L~v 221 (491)
..+.+++.++|..+++.+...... ....+|||++++++.++++++
T Consensus 64 ---------------------------------~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~ 110 (237)
T 1txo_A 64 ---------------------------------GDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGL 110 (237)
T ss_dssp ---------------------------------SCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEE
T ss_pred ---------------------------------hhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEE
Confidence 013455666777777766554332 235689999999999999999
Q ss_pred EEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccC
Q 011209 222 GNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLK 301 (491)
Q Consensus 222 aNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK 301 (491)
+||||||+|++++++ +++||.||++.. ++...|. +. ++..+ +. ..+..++|+||+.
T Consensus 111 a~vGDsr~~l~r~g~-----~~~lt~dh~~~~-----~~~~~G~-i~-----~~~~~-~~----~~~~~~tr~lg~~--- 166 (237)
T 1txo_A 111 VHIGDSRGYLLRDGE-----LTQITKDDTFVQ-----TLVDEGR-IT-----PEEAH-SH----PQRSLIMRALTGH--- 166 (237)
T ss_dssp EEESSCEEEEEETTE-----EEECSCCCBHHH-----HHHHTTS-SC-----TTGGG-GC----TTTTCBCCCBSSS---
T ss_pred EEEccCcEEEEeCCE-----eEEeCCCCCHHH-----HHHHcCC-CC-----HHHHh-hC----ccccceeeccCCC---
Confidence 999999999999664 899999998632 2333332 21 11111 11 2244699999963
Q ss_pred CCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEE
Q 011209 302 DFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCL 381 (491)
Q Consensus 302 ~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv 381 (491)
..+|++..++|.++| +||||||||||+|+++++++++.. .+++.+|+.|++.|+++ ++.||+||||+
T Consensus 167 ----~~~p~~~~~~l~~~d-~lvl~SDGl~d~l~~~~i~~~~~~-~~~~~~a~~L~~~a~~~-------g~~DniTvivv 233 (237)
T 1txo_A 167 ----EVEPTLTMREARAGD-RYLLCSDGLSDPVSDETILEALQI-PEVAESAHRLIELALRG-------GGPDNVTVVVA 233 (237)
T ss_dssp ----CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTS-SSHHHHHHHHHHHHHHT-------TCCSCEEEEEE
T ss_pred ----CccceEEEEecCCCC-EEEEECCCCCCCCCHHHHHHHHhc-CCHHHHHHHHHHHHHHc-------CCCCCeEEEEE
Confidence 478999999999999 679999999999999999999965 58999999999999998 88999999999
Q ss_pred EeCC
Q 011209 382 FLDS 385 (491)
Q Consensus 382 ~l~~ 385 (491)
+|.+
T Consensus 234 ~~~~ 237 (237)
T 1txo_A 234 DLEH 237 (237)
T ss_dssp EEEC
T ss_pred EeeC
Confidence 9863
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=6.7e-38 Score=303.90 Aligned_cols=233 Identities=23% Similarity=0.243 Sum_probs=173.5
Q ss_pred eEeeeccCC-CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 65 ASLFTQQGK-KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 65 ~~~~s~~G~-R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
++.+|++|+ |..|||++ +...- .+. +|+|||||| |+.++++++..+...|...+......
T Consensus 3 ~~~~s~~G~~r~~neD~~-~~~~~---~~~-~~~V~DG~G--g~~~~~~as~~~~~~l~~~~~~~~~~------------ 63 (240)
T 2j82_A 3 VAGLTDCGLIRKSNQDAF-YIDEK---HQR-FFIVADGMG--GHAGGEEASRLAVDHIRQYLETHLED------------ 63 (240)
T ss_dssp EEEEEECCSSCSSCCEEE-EECTT---TCC-EEEEEEBC-----CHHHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred EEEeCCCCCCCCcCCCcc-EecCC---CCe-EEEEEcCCC--CchHHHHHHHHHHHHHHHHHHhcccc------------
Confidence 466799999 99999999 65431 344 999999999 77777777777776666543221100
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCCcceEEEEEEe--CCeE
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID--CFCSGTTAVTLIKQ--GQHL 219 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d--~~~sGTTavv~li~--~~~L 219 (491)
....+.+++.++|..+++.+......+ ...+|||++++++. ++++
T Consensus 64 -------------------------------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l 112 (240)
T 2j82_A 64 -------------------------------LQHDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRA 112 (240)
T ss_dssp -------------------------------HTTSHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEE
T ss_pred -------------------------------cchhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEE
Confidence 001245677788888888887665432 44589999999999 9999
Q ss_pred EEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccc
Q 011209 220 VIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFC 299 (491)
Q Consensus 220 ~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~ 299 (491)
+++|+||||+|+++.++ +.+||.||++..+ +.+.|+ +.. +..+.+ ...++++|+||+.
T Consensus 113 ~~anvGDsr~~l~r~~~-----~~~lt~dh~~~~~-----~~~~g~-i~~-----~~~~~~-----~~~~~ltralG~~- 170 (240)
T 2j82_A 113 WCAHVGDSRIYRWRKDQ-----LQQITSDHTWIAQ-----AVQLGS-LTI-----EQARQH-----PWRHVLSQCLGRE- 170 (240)
T ss_dssp EEEEESSCEEEEEETTE-----EEECSCCCBHHHH-----C---------------------------CCCBSCCBSCT-
T ss_pred EEEEEccCceEEEeCCE-----EEEECCCCcHHHH-----HHHcCC-CCH-----HHHhcC-----CCcCeEeecCCCC-
Confidence 99999999999999654 8999999987432 233332 211 001110 2356899999997
Q ss_pred cCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEE
Q 011209 300 LKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVV 379 (491)
Q Consensus 300 lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvI 379 (491)
...+|++..++|.++| +||||||||||+|+++++.+++. ..+++.+|+.|++.|+.+ ++.||+|||
T Consensus 171 -----~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~l~-~~~~~~~a~~l~~~a~~~-------g~~DniTvi 236 (240)
T 2j82_A 171 -----DLSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISIYLS-EPNVQKAAAALVDAAKTH-------GGRDNVTVV 236 (240)
T ss_dssp -----TCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT-CSSHHHHHHHHHHHHHHT-------TCCSCEEEE
T ss_pred -----CceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHHHc-cCCHHHHHHHHHHHHHHc-------CCCCCeEEE
Confidence 5679999999999999 68999999999999999999998 778999999999999988 889999999
Q ss_pred EEEe
Q 011209 380 CLFL 383 (491)
Q Consensus 380 vv~l 383 (491)
|+++
T Consensus 237 vv~~ 240 (240)
T 2j82_A 237 VISV 240 (240)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9975
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=1.7e-37 Score=300.10 Aligned_cols=222 Identities=24% Similarity=0.252 Sum_probs=175.8
Q ss_pred eEeeeccCC-CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhcccc
Q 011209 65 ASLFTQQGK-KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA 143 (491)
Q Consensus 65 ~~~~s~~G~-R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 143 (491)
++..|++|+ |..|||++++ +..+|+||||||++|+.+|+++.+.|...+... .
T Consensus 8 ~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~-------------- 61 (234)
T 2jfr_A 8 AATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAA----P-------------- 61 (234)
T ss_dssp EEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----C--------------
T ss_pred EEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----C--------------
Confidence 567799999 9999999966 345999999999556688888888877655321 0
Q ss_pred CCccccccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEeCCe---EE
Q 011209 144 GSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQH---LV 220 (491)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~~~~---L~ 220 (491)
+ .+.+.++|..+++.+......+...+|||++++++.++. ++
T Consensus 62 ------------------------------~-----~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~ 106 (234)
T 2jfr_A 62 ------------------------------D-----RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPL 106 (234)
T ss_dssp ------------------------------S-----HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCE
T ss_pred ------------------------------c-----HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEE
Confidence 0 245667777777777665543323399999999999999 99
Q ss_pred EEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeeccccccccc
Q 011209 221 IGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCL 300 (491)
Q Consensus 221 vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~l 300 (491)
++|+||||+|++++++ +.+||.||++.. ++...|.. . ++..++ ..+.++++|+||+.
T Consensus 107 ~anvGDsr~~l~r~g~-----~~~lt~dh~~~~-----~~~~~g~i-~-----~~~~~~-----~~~~~~~tralG~~-- 163 (234)
T 2jfr_A 107 VVNIGDSPLYRIRDGH-----MEQLTDDHSVAG-----ELVRMGEI-T-----RHEARW-----HPQRHLLTRALGIG-- 163 (234)
T ss_dssp EEEESSCCEEEEETTE-----EEECSCCCBHHH-----HHHHTTSS-C-----HHHHTT-----CTTTTCBSCCBSSS--
T ss_pred EEEEccCceEEEECCE-----EEEeCCCCCHHH-----HHHHcCCC-C-----HHHHhc-----CcccceeeecCcCC--
Confidence 9999999999998654 899999998743 23333321 1 011111 12457899999997
Q ss_pred CCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEE
Q 011209 301 KDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVC 380 (491)
Q Consensus 301 K~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIv 380 (491)
...+|++..++|.++| +||||||||||+|+++++.+++ ...+++.+|+.|++.|+.+ ++.||+||||
T Consensus 164 ----~~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-~~~~~~~~a~~l~~~a~~~-------g~~DniTviv 230 (234)
T 2jfr_A 164 ----PHIGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAA-TSPDPQVAVRRLVEVANDA-------GGSDNTTVVV 230 (234)
T ss_dssp ----SCCCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHH-TCSSHHHHHHHHHHHHHHT-------TCCSCEEEEE
T ss_pred ----CCceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHH-ccCCHHHHHHHHHHHHHHc-------CCCCCeEEEE
Confidence 5679999999999999 7899999999999999999999 7789999999999999988 8899999999
Q ss_pred EEe
Q 011209 381 LFL 383 (491)
Q Consensus 381 v~l 383 (491)
+++
T Consensus 231 v~~ 233 (234)
T 2jfr_A 231 IDL 233 (234)
T ss_dssp EEE
T ss_pred EEe
Confidence 987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=8.4e-34 Score=271.22 Aligned_cols=198 Identities=16% Similarity=0.177 Sum_probs=143.1
Q ss_pred CCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccccccccccCCcccccccchhhhc
Q 011209 91 ADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETE 170 (491)
Q Consensus 91 ~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (491)
++..+|+|||||| |+.+++++++.+.+.|...+.....
T Consensus 8 ~~~~l~~VaDG~G--G~~~g~~AS~~~~~~l~~~~~~~~~---------------------------------------- 45 (211)
T 3rnr_A 8 GDKAYCVVVDGMG--GMIRGDEAAQRALSASVGVLDAGGS---------------------------------------- 45 (211)
T ss_dssp TTEEEEEEEEECT--TSTTHHHHHHHHHHHHHHHHHTTCC----------------------------------------
T ss_pred CCccEEEEEeCCc--CcHHHHHHHHHHHHHHHHHHhccCC----------------------------------------
Confidence 5778999999999 7777777777777777665432110
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCceeEEEEeCCCCceEEEEeccc
Q 011209 171 KFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVD 248 (491)
Q Consensus 171 ~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~D 248 (491)
+++++..+...+.+..... .....+|||++++++. ++++|++||||||+|++++++ +++||.|
T Consensus 46 --------~~~~~~~an~~l~~~~~~~--~~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g~-----~~~lt~d 110 (211)
T 3rnr_A 46 --------PLDAVLAAQAAVHRWASQG--GILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGGR-----LSRLSLD 110 (211)
T ss_dssp --------HHHHHHHHHHHHHHHHHHT--TCTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETTE-----EEECCCC
T ss_pred --------HHHHHHHHHHHHHHHHhhc--cCCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCCE-----EEEECCC
Confidence 1234444444443332221 2355799999999999 999999999999999999765 9999999
Q ss_pred CCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCceecceE--EEEEcCCCCeEEEEE
Q 011209 249 LKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDI--SYRRLTDKDEFIVLA 326 (491)
Q Consensus 249 H~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~Pdv--~~~~L~~~D~fLVLa 326 (491)
|++.. ++...|. .. ... .....++|+||+. ...+|++ ..+++.++| +||||
T Consensus 111 h~~~~-----~~~~~g~--~~---~~~----------~~~~~ltralG~~------~~~~~~~~~~~~~l~~gd-~llL~ 163 (211)
T 3rnr_A 111 HNVSS-----EMVLLGR--GP---VPG----------PAGEMITSFIGIE------NLTEISTSEAPLPLEAGE-GVLVV 163 (211)
T ss_dssp CBHHH-----HHHHTTS--CC---CCS----------HHHHCBSCCBTCS------SCCCCEECSSCEECCTTC-EEEEE
T ss_pred cHHHH-----HHHHcCC--Ch---hhC----------CCccEEecccCCC------CCcceeEecceecCCCCC-EEEEE
Confidence 98632 2333333 11 000 1124689999986 4567899 789999999 67999
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCC--CccceEEEEEEe
Q 011209 327 TDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTS--KVDDCAVVCLFL 383 (491)
Q Consensus 327 SDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g--~~DNiTvIvv~l 383 (491)
||||||+|+++++.+++....+ |+.|++.|+++ + +.||+|||||+|
T Consensus 164 SDGl~d~~~~~~i~~~l~~~~~----a~~L~~~a~~~-------g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 164 SDGVYRSLHEDRIAMALSRGSD----ARGILQEVEAQ-------GRPYQDNATLALVIL 211 (211)
T ss_dssp EC-----CCTTEEEEEECTTSC----HHHHHHHHHHS-------CTTSCSSCEEEEEEC
T ss_pred cCCCCCCcCHHHHHHHHhcCCh----HHHHHHHHHHc-------CCCCCCceEEEEEeC
Confidence 9999999999999999977655 99999999988 6 899999999986
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.80 E-value=8.4e-19 Score=169.99 Aligned_cols=199 Identities=19% Similarity=0.170 Sum_probs=130.0
Q ss_pred ccCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCcccc
Q 011209 70 QQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSE 149 (491)
Q Consensus 70 ~~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (491)
.+..+..+.|.|.+... ..+..+++|+||+| +...|.+++..+...|...+....
T Consensus 16 ~~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G--~G~~aa~~s~~~~~~l~~~~~~~~-------------------- 70 (242)
T 3t91_A 16 AKGGGLVSGDSYSMMEL---GARKYAAAISDGMG--NGARAHFESNETIKLLEKILESGI-------------------- 70 (242)
T ss_dssp CTTSCSCCSCEEEEEEE---TTTEEEEEEECC-------CCSEEECHHHHHHHHHHHHTC--------------------
T ss_pred cCCccccCCcEEEEEEe---CCCeEEEEEEeeCC--CCHHHHHHHHHHHHHHHHHHHhCC--------------------
Confidence 34557899999887543 24567799999999 555555444444444443221110
Q ss_pred ccccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCc
Q 011209 150 DTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDS 227 (491)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDS 227 (491)
...+++..+++.+.... ...+++|+++++++ .+.++++|+||+
T Consensus 71 --------------------------------~~~~~l~~~n~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~aG~~ 115 (242)
T 3t91_A 71 --------------------------------DEKIAIKTINSILSLRT---TDEIYSTLDLSIIDLQDASCKFLKVGST 115 (242)
T ss_dssp --------------------------------CHHHHHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCC
T ss_pred --------------------------------CHHHHHHHHHHHHHhcC---CCCeEeEEEEEEEECCCCEEEEEcCCCC
Confidence 01233444555554322 13578999999987 689999999999
Q ss_pred eeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCcee
Q 011209 228 RAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLIS 307 (491)
Q Consensus 228 Ra~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~ 307 (491)
|+|+++.++ +.+|+.++.| +|-. -..
T Consensus 116 ~~~l~r~g~-----~~~l~~~~~~-------------------------------------------lG~~------~~~ 141 (242)
T 3t91_A 116 PSFIKRGDQ-----VMKVQASNLP-------------------------------------------IGII------NEF 141 (242)
T ss_dssp CEEEEETTE-----EEECCCC------------------------------------------------CC------CTT
T ss_pred ceEEEECCE-----EEEecCCCce-------------------------------------------eEec------CCC
Confidence 999998643 6676543321 2211 112
Q ss_pred cceEEEEEcCCCCeEEEEEcCCCCCCCC-----HHHHHHHHHc--CCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEE
Q 011209 308 VPDISYRRLTDKDEFIVLATDGIWDVLS-----NEEVVEIVAS--APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVC 380 (491)
Q Consensus 308 ~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls-----~~ei~~iv~~--~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIv 380 (491)
.++...++|.++| .||||||||||.++ ...+.+++.. ..+++++++.|++.+.+.. .+...||+|||+
T Consensus 142 ~~~~~~~~l~~GD-~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~~~~~----~~~~~DDiTvv~ 216 (242)
T 3t91_A 142 DVEVVSEQLKAGD-LLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTR----SGQIEDDMTVVV 216 (242)
T ss_dssp CEEEEEEECCTTC-EEEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHT----TSCCCSCEEEEE
T ss_pred cceEEEEEeCCCC-EEEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHc----CCCCCCceEEEE
Confidence 4567788999999 78999999999998 6777888874 3689999999999998871 011369999999
Q ss_pred EEeCCCC
Q 011209 381 LFLDSNS 387 (491)
Q Consensus 381 v~l~~~~ 387 (491)
+++....
T Consensus 217 i~~~~~~ 223 (242)
T 3t91_A 217 VRIDHNT 223 (242)
T ss_dssp EEEEECC
T ss_pred EEEecCC
Confidence 9997653
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.78 E-value=3.9e-17 Score=158.83 Aligned_cols=199 Identities=17% Similarity=0.075 Sum_probs=139.3
Q ss_pred cCCCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccccc
Q 011209 71 QGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSED 150 (491)
Q Consensus 71 ~G~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (491)
+..+..+.|.|.+... ..+..+++|+||+| ++..|.+++..+...+...+.....
T Consensus 20 ~~~~~vgGD~y~~~~~---~~~~~~~~vaD~~G--~G~~aa~~s~~~~~~l~~~~~~~~~-------------------- 74 (242)
T 3pu9_A 20 KFGTRESGDTVELVER---PGGGFSAVLVDGQG--SGAGAKRLSLLVAGAAVRLLNEGVR-------------------- 74 (242)
T ss_dssp CTTCSSCSEEEEEEEC---TTSEEEEEEEEESS--SHHHHHHHHHHHHHHHHHHHHTTCC--------------------
T ss_pred cCccccCCceEEEEEe---CCCEEEEEEEecCC--CCHHHHHHHHHHHHHHHHHHHcCCC--------------------
Confidence 3446788999888643 23566799999999 7777777777766666554321110
Q ss_pred cccccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCce
Q 011209 151 TSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDSR 228 (491)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDSR 228 (491)
+ ..++..+|+.+..... ..+.+|+++++++ .+.++++|+||++
T Consensus 75 ----------------------------~----~~~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~ 119 (242)
T 3pu9_A 75 ----------------------------D----GAAARAAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVP 119 (242)
T ss_dssp ----------------------------H----HHHHHHHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCC
T ss_pred ----------------------------H----HHHHHHHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCc
Confidence 1 1334444554433321 2467999999886 6789999999999
Q ss_pred eEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCceec
Q 011209 229 AVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISV 308 (491)
Q Consensus 229 a~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~ 308 (491)
+|+++.++ +.+|+.++.| +|-. -...
T Consensus 120 ~~l~r~g~-----~~~l~~~~~~-------------------------------------------lG~~------~~~~ 145 (242)
T 3pu9_A 120 MLLGRNGE-----FEQISESGGR-------------------------------------------IGIY------RHTR 145 (242)
T ss_dssp EEEEETTE-----EEEECCCCCC-------------------------------------------BSSC------TTCC
T ss_pred EEEEECCE-----EEEeCCCCcc-------------------------------------------cccc------CCCC
Confidence 99999654 7888877542 2321 1124
Q ss_pred ceEEEEEcCCCCeEEEEEcCCCCCCCC-------HHHHHHHHH-cCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEE
Q 011209 309 PDISYRRLTDKDEFIVLATDGIWDVLS-------NEEVVEIVA-SAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVC 380 (491)
Q Consensus 309 Pdv~~~~L~~~D~fLVLaSDGlwD~Ls-------~~ei~~iv~-~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIv 380 (491)
++...++|.++| .|+||||||+|... .+++..++. ...+++++++.|++.+.... .+...||+|+|+
T Consensus 146 ~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~----~~~~~DDiTvlv 220 (242)
T 3pu9_A 146 PRVLEFPAEPGL-TVILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIADELLEAALVAD----DGRAGDDMTVVV 220 (242)
T ss_dssp CEEEEEECCTTC-EEEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHT----TTSCSSCEEEEE
T ss_pred ceEEEEEeCCCC-EEEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHHHHHHHHHHHhc----CCCCCCCeEEEE
Confidence 567789999999 78999999998764 477765554 23589999999999999871 112589999999
Q ss_pred EEeCCCCC
Q 011209 381 LFLDSNSN 388 (491)
Q Consensus 381 v~l~~~~~ 388 (491)
+++.+...
T Consensus 221 v~~~~~~~ 228 (242)
T 3pu9_A 221 LRLRNVEE 228 (242)
T ss_dssp EEEEECCC
T ss_pred EEEecCCC
Confidence 99976543
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.61 E-value=3e-14 Score=133.72 Aligned_cols=177 Identities=20% Similarity=0.162 Sum_probs=120.1
Q ss_pred CCCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCccccccc
Q 011209 73 KKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTS 152 (491)
Q Consensus 73 ~R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (491)
.+..+.|.|.+... ++..+++|+||+| ....|.++...+...|.... ..
T Consensus 15 ~~~v~GD~y~~~~~----~~~~~~~v~Dv~G--hG~~Aa~~s~~~~~~l~~~~---~~---------------------- 63 (193)
T 3zt9_A 15 GEIACGDACLVKRV----EGVIFLAVGDGIG--HGPEAARAAEIAIASMESSM---NT---------------------- 63 (193)
T ss_dssp TCSSCSEEEEEEEE----TTEEEEEEEEESS--SHHHHHHHHHHHHHHHHHHT---TS----------------------
T ss_pred CCCCCCCeEEEEEe----CCEEEEEEEeCCC--CCHHHHHHHHHHHHHHHHcc---cC----------------------
Confidence 46788999988653 4678899999999 44444455555555444310 00
Q ss_pred cccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCceeE
Q 011209 153 FVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDSRAV 230 (491)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDSRa~ 230 (491)
.+ .+.+..+|+.+.. ..|+|++++.++ .+.+.++|+|+++.|
T Consensus 64 -------------------------~p----~~il~~ln~~l~~-------~~~~t~~~~~id~~~~~l~~~~aGh~~~~ 107 (193)
T 3zt9_A 64 -------------------------GL----VNIFQLCHRELRG-------TRGAVAALCRVDRRQGLWQAAIVGNIHVK 107 (193)
T ss_dssp -------------------------CH----HHHHHHHHHHHTT-------SSCEEEEEEEEETTTTEEEEEEESSCEEE
T ss_pred -------------------------CH----HHHHHHHHHHHhc-------cCceEEEEEEEECCCCEEEEEecCCceEE
Confidence 01 1223345555532 247888888887 568999999999999
Q ss_pred EEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCceecce
Q 011209 231 LGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPD 310 (491)
Q Consensus 231 L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~Pd 310 (491)
+++.++ ..++... ++ .+|.. ....++
T Consensus 108 l~~~~~-----~~~l~~~---------------~g----------------------------~lG~~------~~~~~~ 133 (193)
T 3zt9_A 108 ILSAKG-----IITPLAT---------------PG----------------------------ILGYN------YPHQLL 133 (193)
T ss_dssp EEETTE-----EECCCCB---------------CC----------------------------BBTTB------CCSSCC
T ss_pred EEcCCc-----EEEecCC---------------CC----------------------------ceecc------CCccce
Confidence 998643 3333211 01 12321 111345
Q ss_pred EEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEE
Q 011209 311 ISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF 382 (491)
Q Consensus 311 v~~~~L~~~D~fLVLaSDGlwD~Ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~ 382 (491)
...+++.++| .|+|+||||++.+..+++..++ ..+++++|+.|++.+ . ...||+||||++
T Consensus 134 ~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~~~--~~~~~~~a~~l~~~~--~-------~~~Dd~tvlv~r 193 (193)
T 3zt9_A 134 IAKGSYQEGD-LFLIHSDGIQEGAVPLALLANY--RLTAEELVRLIGEKY--G-------RRDDDVAVIVAR 193 (193)
T ss_dssp CEEEECCTTC-EEEEECTTSCTTCSCGGGGGCT--TSCHHHHHHHHHHHH--C-------CTTSCEEEEEEC
T ss_pred eEEeccCCCC-EEEEECCCCCCccChhhhhchh--cCCHHHHHHHHHHHh--C-------cCCCCeEEEEEC
Confidence 6788999999 7899999999999999887765 458999999999986 2 468999999974
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.60 E-value=1.4e-14 Score=141.25 Aligned_cols=195 Identities=18% Similarity=0.039 Sum_probs=117.1
Q ss_pred CCCCCcceeeecccCCCCCceEEEEecCCCCChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhccccCCcccccccc
Q 011209 74 KGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSF 153 (491)
Q Consensus 74 R~~NEDa~~v~~~~~~~~~~~l~gVfDGhG~~G~~aA~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (491)
+...-|.|-+... ..+..+++|+||+| +...|.++...+...+...+.......
T Consensus 48 ~~vgGD~yd~~~~---~~~~~~~~vaD~~G--hG~~aa~~s~~~~~~~~~~~~~~~~~~--------------------- 101 (255)
T 3f79_A 48 LYLSGDFVDYFRV---DERRVAFYLADVSG--HGASSAFVTVLLKFMTTRLLYESRRNG--------------------- 101 (255)
T ss_dssp SSSCSEEEEEEEE---TTTEEEEEEEEESS--CSHHHHHHHHHHHHHHHHHHHHHTTCC---------------------
T ss_pred hhcCceEEeEEEe---CCCEEEEEEEEecC--CCHHHHHHHHHHHHHHHHHHHhhcccc---------------------
Confidence 5677898755432 24567899999999 555555555555444443322110000
Q ss_pred ccCCcccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcceEEEEEEe--CCeEEEEEeCCc-eeE
Q 011209 154 VSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQ--GQHLVIGNVGDS-RAV 230 (491)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~d~~l~~~~~~d~~~sGTTavv~li~--~~~L~vaNVGDS-Ra~ 230 (491)
.........++..+|+.+... ...+++|+++++++ .+.++++|+|++ +.|
T Consensus 102 -----------------------~~~~~~p~~~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~ 154 (255)
T 3f79_A 102 -----------------------TLPEFKPSEVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPV 154 (255)
T ss_dssp -----------------------C----CHHHHHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCE
T ss_pred -----------------------ccccCCHHHHHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceE
Confidence 000011334555666666532 24689999999995 678999999995 688
Q ss_pred EEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeeeccCCCCCceeecccccccccCCCCceecce
Q 011209 231 LGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPD 310 (491)
Q Consensus 231 L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvwl~~~~~~gLa~tRalGD~~lK~~gv~~~Pd 310 (491)
+.+.++ +.+|+.+|.| +|-. -...++
T Consensus 155 l~~~g~-----~~~l~~~~~~-------------------------------------------lG~~------~~~~~~ 180 (255)
T 3f79_A 155 LFVEGQ-----AGYLEGRGLP-------------------------------------------VGLF------DDATYD 180 (255)
T ss_dssp EEC--C-----EEECCC------------------------------------------------CCS------SCCCCC
T ss_pred EEeCCe-----EEEeCCCCce-------------------------------------------EEEc------CCCceE
Confidence 887554 7777766532 2211 112335
Q ss_pred EEEEEcCCCCeEEEEEcCCCCCCCCHHH-------HHHHHHcC-CCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEE
Q 011209 311 ISYRRLTDKDEFIVLATDGIWDVLSNEE-------VVEIVASA-PARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF 382 (491)
Q Consensus 311 v~~~~L~~~D~fLVLaSDGlwD~Ls~~e-------i~~iv~~~-~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~ 382 (491)
...++|.++| .|+||||||++.++.++ +.+++... .+++.+++.|+ .+... +..||+|||+++
T Consensus 181 ~~~~~l~~gd-~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~l~-~~~~~-------~~~DDiTvl~v~ 251 (255)
T 3f79_A 181 DRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFG-LANLA-------EMPDDIALLVLS 251 (255)
T ss_dssp C---BCCSSE-EEEEECSCCCCCSCC---CCTTTSSHHHHHHHSCSSHHHHHHC------C-------CSSSCEEEEEEE
T ss_pred EEEEEECCCC-EEEEECCCcCcccCCCcchhhHHHHHHHHHhcCCCHHHHHHHHH-hccCC-------CCCCCEEEEEEE
Confidence 5678899999 78999999999999888 88888653 35677777765 33333 788999999998
Q ss_pred eC
Q 011209 383 LD 384 (491)
Q Consensus 383 l~ 384 (491)
..
T Consensus 252 ~~ 253 (255)
T 3f79_A 252 RN 253 (255)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.03 E-value=2.2e-08 Score=103.99 Aligned_cols=127 Identities=18% Similarity=0.139 Sum_probs=88.1
Q ss_pred CCCcceEEEEEEe--CCeEEEEEeCCceeEEEEeCCCCceEEEEecccCCCCCHHHHHHHHhcCCeEEeecCCCcceeee
Q 011209 203 FCSGTTAVTLIKQ--GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVW 280 (491)
Q Consensus 203 ~~sGTTavv~li~--~~~L~vaNVGDSRa~L~r~~~d~~~~~~qLT~DH~p~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvw 280 (491)
..+++|+++++++ .+.+.++|.|..+.|+++.++ . ...+..++.+
T Consensus 116 ~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g--~--~~~l~~~~~~----------------------------- 162 (399)
T 3ke6_A 116 GSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADA--S--ARYVEPTGAG----------------------------- 162 (399)
T ss_dssp TCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTS--C--EEECCCCSCC-----------------------------
T ss_pred CCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCC--C--EEEeecCCCc-----------------------------
Confidence 3468899888886 578999999999999998432 1 4455443321
Q ss_pred ccCCCCCceeecccccccccCCCCceecceEEEEEcCCCCeEEEEEcCCCCCCCCH------HHHHHHHHcCC-------
Q 011209 281 LPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSN------EEVVEIVASAP------- 347 (491)
Q Consensus 281 l~~~~~~gLa~tRalGD~~lK~~gv~~~Pdv~~~~L~~~D~fLVLaSDGlwD~Ls~------~ei~~iv~~~~------- 347 (491)
.+|- ....+...+.|.++| .|+|+||||.|.... +.+.+++....
T Consensus 163 -------------plG~--------~~~~~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~ 220 (399)
T 3ke6_A 163 -------------PLGS--------GTGFPVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFV 220 (399)
T ss_dssp -------------CTTS--------SCCCCCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC------
T ss_pred -------------ceEC--------CCCceeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhccccccc
Confidence 1221 112244668899999 789999999998765 55666665421
Q ss_pred --CHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEEeCCC
Q 011209 348 --ARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSN 386 (491)
Q Consensus 348 --~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~ 386 (491)
+++..++.|++.+++.|... ....||+||+++++...
T Consensus 221 ~~~~~~~~~~l~~~~~~~~~~~--~~~~DDitvl~vr~~~~ 259 (399)
T 3ke6_A 221 LDAPARPIDRLCSDTLELLLRS--TGYNDDVTLLAMQRRAP 259 (399)
T ss_dssp ----CCHHHHHHHHHHHHHHHT--TCCSSCEEEEEEEECCC
T ss_pred ccChhhHHHHHHHHHHHHhccC--CCCCCceEEEEEEeeCC
Confidence 34566777888877765432 25789999999999875
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.17 E-value=1.9e-05 Score=81.12 Aligned_cols=67 Identities=27% Similarity=0.203 Sum_probs=38.1
Q ss_pred eEEEEEcCCCCeEEEEEcCCCCCCCCH-------HHHHHHHHcCCCHHHHHHHHHHHHHHhhhhcCCCCCccceEEEEEE
Q 011209 310 DISYRRLTDKDEFIVLATDGIWDVLSN-------EEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF 382 (491)
Q Consensus 310 dv~~~~L~~~D~fLVLaSDGlwD~Ls~-------~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~ 382 (491)
+...+.|.++| .|+|.||||.|.... +.+.+++..... ..+.|++.... .......||+|+++++
T Consensus 319 ~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~~~---~~~~l~~~~~~----~~~~~~~DDit~l~i~ 390 (394)
T 3eq2_A 319 DDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAAAGG---TLDGLRQVFGL----ANLAEMPDDIALLVLS 390 (394)
T ss_dssp CCEEEECCSSC-EEEECSSCCCC-----CCSTTTTTSHHHHHTTC-----CHHHHHHHSC----CCSCC--CCCEEEEEC
T ss_pred EEEEEEeCCCC-EEEEECCCcccccCcccchhhHHHHHHHHHhcch---hHHHHHHHhcc----cCCCCCCCceEEEEEe
Confidence 34568899999 789999999997543 445566655432 13334333221 1123457999999998
Q ss_pred eC
Q 011209 383 LD 384 (491)
Q Consensus 383 l~ 384 (491)
..
T Consensus 391 ~~ 392 (394)
T 3eq2_A 391 RN 392 (394)
T ss_dssp --
T ss_pred cc
Confidence 64
No 25
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=20.30 E-value=48 Score=31.70 Aligned_cols=23 Identities=43% Similarity=0.667 Sum_probs=19.7
Q ss_pred EEEEec-CCCCChHHHHHHHHHHHHH
Q 011209 95 FCGVFD-GHGPYGHMVAKRVRDSLPL 119 (491)
Q Consensus 95 l~gVfD-GhG~~G~~aA~~a~~~l~~ 119 (491)
-.|||| |.| |-.+++.+++.+|.
T Consensus 9 pIgvfDSGvG--GLtv~~~i~~~lp~ 32 (268)
T 3out_A 9 PIGVFDSGIG--GLTIVKNLMSILPN 32 (268)
T ss_dssp CEEEEESSST--THHHHHHHHHHCTT
T ss_pred cEEEEECCCC--hHHHHHHHHHHCCC
Confidence 369999 999 99999998888764
Done!