Query         011210
Match_columns 491
No_of_seqs    183 out of 2075
Neff          11.0
Searched_HMMs 46136
Date          Thu Mar 28 22:49:13 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011210.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011210hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.2E-78 2.5E-83  579.5  43.7  413   43-467    25-463 (489)
  2 PLN02302 ent-kaurenoic acid ox 100.0   1E-77 2.2E-82  594.6  49.0  450   38-490    36-487 (490)
  3 PLN02500 cytochrome P450 90B1  100.0 2.2E-77 4.7E-82  589.4  45.9  438   41-489    35-488 (490)
  4 PLN02774 brassinosteroid-6-oxi 100.0 3.7E-76   8E-81  576.0  45.1  430   44-490    31-463 (463)
  5 PLN02196 abscisic acid 8'-hydr 100.0 5.5E-76 1.2E-80  574.2  45.5  430   41-490    32-462 (463)
  6 KOG0158 Cytochrome P450 CYP3/C 100.0 5.4E-75 1.2E-79  545.3  41.7  448   21-491    17-499 (499)
  7 PLN03141 3-epi-6-deoxocathaste 100.0 8.6E-75 1.9E-79  565.1  44.7  439   41-490     4-449 (452)
  8 PLN02971 tryptophan N-hydroxyl 100.0 2.6E-74 5.7E-79  571.9  47.6  440   42-490    55-533 (543)
  9 PLN02290 cytokinin trans-hydro 100.0 3.3E-73 7.2E-78  563.8  45.5  438   44-491    42-515 (516)
 10 PLN02687 flavonoid 3'-monooxyg 100.0 6.1E-73 1.3E-77  560.5  45.3  438   41-490    31-508 (517)
 11 PLN02987 Cytochrome P450, fami 100.0 3.3E-72   7E-77  545.5  45.9  435   42-490    28-468 (472)
 12 KOG0157 Cytochrome P450 CYP4/C 100.0 1.1E-73 2.5E-78  557.2  35.1  437   43-491    34-496 (497)
 13 PLN02183 ferulate 5-hydroxylas 100.0 2.7E-72 5.9E-77  555.7  45.4  435   43-490    35-511 (516)
 14 PLN00168 Cytochrome P450; Prov 100.0 4.1E-72 8.9E-77  554.9  45.9  442   42-491    33-517 (519)
 15 PTZ00404 cytochrome P450; Prov 100.0 3.2E-72   7E-77  552.5  42.0  431   42-490    27-482 (482)
 16 PLN03234 cytochrome P450 83B1; 100.0 7.3E-72 1.6E-76  552.4  44.4  437   42-490    26-498 (499)
 17 PLN00110 flavonoid 3',5'-hydro 100.0 1.1E-71 2.3E-76  548.2  44.3  463    8-490     3-496 (504)
 18 PLN03112 cytochrome P450 famil 100.0   2E-70 4.4E-75  543.6  45.7  439   40-490    28-507 (514)
 19 PLN02966 cytochrome P450 83A1  100.0 2.6E-70 5.7E-75  540.3  43.0  416   42-467    27-470 (502)
 20 PLN02394 trans-cinnamate 4-mon 100.0 7.2E-70 1.6E-74  538.7  43.8  436   43-491    29-502 (503)
 21 KOG0684 Cytochrome P450 [Secon 100.0 7.1E-70 1.5E-74  485.6  38.0  433   44-491    31-485 (486)
 22 PLN03018 homomethionine N-hydr 100.0 1.4E-68 2.9E-73  526.9  47.3  444   37-490    33-523 (534)
 23 PLN03195 fatty acid omega-hydr 100.0 1.4E-69   3E-74  537.4  40.2  435   46-491    32-516 (516)
 24 PLN02169 fatty acid (omega-1)- 100.0 3.8E-69 8.3E-74  529.0  42.6  428   47-490    34-499 (500)
 25 KOG0159 Cytochrome P450 CYP11/ 100.0 1.9E-69 4.2E-74  495.4  36.1  438   42-491    48-518 (519)
 26 PLN02738 carotene beta-ring hy 100.0 6.7E-69 1.4E-73  534.4  40.8  415   64-491   147-595 (633)
 27 PF00067 p450:  Cytochrome P450 100.0 5.4E-70 1.2E-74  538.6  31.9  431   46-487     1-463 (463)
 28 PLN02655 ent-kaurene oxidase   100.0 1.1E-68 2.4E-73  523.8  40.6  430   46-491     1-464 (466)
 29 PLN02936 epsilon-ring hydroxyl 100.0 6.9E-67 1.5E-71  513.2  40.1  431   47-490    15-481 (489)
 30 PLN02426 cytochrome P450, fami 100.0 3.2E-64 6.8E-69  493.3  40.8  418   52-491    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 1.2E-61 2.7E-66  467.5  32.8  405   42-469    15-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.6E-57   1E-61  431.0  35.2  380   70-490    24-410 (411)
 33 PF15050 SCIMP:  SCIMP protein   83.5     3.4 7.3E-05   30.9   5.0   17   42-58     66-83  (133)
 34 PHA03049 IMV membrane protein;  71.4      12 0.00026   24.8   4.3   23    7-29      4-26  (68)
 35 PF12273 RCR:  Chitin synthesis  69.4       4 8.6E-05   32.1   2.4   14    7-20      2-15  (130)
 36 PF15330 SIT:  SHP2-interacting  68.0      13 0.00029   27.9   4.7   12   51-62     45-56  (107)
 37 PF12508 DUF3714:  Protein of u  64.3     2.9 6.2E-05   35.4   0.7   43  353-396    52-94  (200)
 38 PF05961 Chordopox_A13L:  Chord  50.9      46   0.001   22.2   4.3   22    8-29      5-26  (68)
 39 PF05952 ComX:  Bacillus compet  49.7     9.5 0.00021   24.7   1.1   25  312-336     4-28  (57)
 40 PF12273 RCR:  Chitin synthesis  49.2      20 0.00043   28.2   3.1   25    5-29      3-27  (130)
 41 PRK06789 flagellar motor switc  41.5      31 0.00066   23.9   2.6   39  359-397    21-62  (74)
 42 PF08173 YbgT_YccB:  Membrane b  38.5      68  0.0015   17.4   3.2   22    4-25      3-24  (28)
 43 TIGR02106 cyd_oper_ybgT cyd op  38.2      72  0.0016   17.6   3.2   22    4-25      3-24  (30)
 44 COG3763 Uncharacterized protei  36.6      65  0.0014   21.8   3.4   11    7-17      4-14  (71)
 45 PF11138 DUF2911:  Protein of u  35.9      59  0.0013   26.0   3.8   42  376-418    51-99  (145)
 46 TIGR03779 Bac_Flav_CT_M Bacter  35.3      16 0.00036   34.7   0.8   43  354-397   256-298 (410)
 47 PF12554 MOZART1:  Mitotic-spin  33.8 1.2E+02  0.0026   18.9   4.4   42  290-331     6-47  (48)
 48 PF08492 SRP72:  SRP72 RNA-bind  33.5      31 0.00068   22.6   1.6   14  404-422    38-51  (59)
 49 PHA02902 putative IMV membrane  31.9 1.5E+02  0.0034   19.6   5.4   15   15-29     13-27  (70)
 50 COG1759 5-formaminoimidazole-4  29.1 1.1E+02  0.0024   28.1   4.7   69  356-453   275-351 (361)
 51 PF13625 Helicase_C_3:  Helicas  28.8      86  0.0019   24.5   3.8   42   68-113    74-115 (129)
 52 PF04367 DUF502:  Protein of un  28.2 1.3E+02  0.0028   22.7   4.4   35   52-93     34-69  (108)
 53 KOG3506 40S ribosomal protein   27.7      28  0.0006   22.1   0.6   11  430-440    12-22  (56)
 54 COG3423 Nlp Predicted transcri  26.6     5.9 0.00013   27.0  -2.6   29  387-423    45-73  (82)
 55 PF09926 DUF2158:  Uncharacteri  26.3      70  0.0015   20.5   2.3   18   81-100     3-20  (53)
 56 COG0851 MinE Septum formation   25.1 2.3E+02  0.0049   20.4   4.7   17  321-337    36-52  (88)
 57 KOG3653 Transforming growth fa  24.7 2.3E+02  0.0051   27.8   6.3   32   78-112   220-252 (534)
 58 COG3924 Predicted membrane pro  23.8 1.2E+02  0.0025   20.7   2.9    8   47-54     37-44  (80)
 59 PF11027 DUF2615:  Protein of u  23.6 1.9E+02  0.0041   21.6   4.3    7   21-27     67-73  (103)
 60 PRK14749 hypothetical protein;  23.2 1.4E+02  0.0031   16.3   3.2   22    4-25      3-24  (30)
 61 KOG2376 Signal recognition par  22.5      48   0.001   33.0   1.5   33  402-440   574-606 (652)
 62 TIGR00847 ccoS cytochrome oxid  22.4 1.8E+02  0.0039   18.5   3.5    7   13-19     11-17  (51)
 63 PF14550 Peptidase_U35_2:  Puta  22.2      66  0.0014   24.9   1.9   22  375-396    71-92  (122)
 64 PF09201 SRX:  SRX;  InterPro:   21.8      89  0.0019   24.5   2.4   23  437-459    18-40  (148)
 65 PF14483 Cut8_M:  Cut8 dimerisa  21.8 1.4E+02  0.0031   17.5   2.8   19  311-329    16-35  (38)
 66 PF13893 RRM_5:  RNA recognitio  21.3 1.8E+02  0.0039   18.3   3.7   35   74-110     1-39  (56)
 67 PF14979 TMEM52:  Transmembrane  21.0 2.2E+02  0.0048   22.7   4.4   15   69-83     76-90  (154)
 68 PF01102 Glycophorin_A:  Glycop  21.0 1.3E+02  0.0029   23.2   3.3    6    7-12     68-73  (122)
 69 PRK05933 type III secretion sy  20.4   1E+02  0.0022   28.3   2.9   43  355-397   316-362 (372)
 70 PF14316 DUF4381:  Domain of un  20.1 1.3E+02  0.0028   24.2   3.3   23    6-28     22-44  (146)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-78  Score=579.49  Aligned_cols=413  Identities=25%  Similarity=0.441  Sum_probs=347.9

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccccc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPT  121 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~  121 (491)
                      .++||||.+||++||++++..    ..+|+.+.+|.++|||  ||++++|..++|||+|++.++|+|++++ .|+++...
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~----~~~h~~~~~ls~~yGp--i~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGS----LPPHRSFRKLSKKYGP--VFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCC--eEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            589999999999999999984    2599999999999999  9999999999999999999999999987 55544431


Q ss_pred             -cc-cccc-cccceeec-cchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc--CCCCeehHHHHHHHHHHH
Q 011210          122 -ST-NKLT-FRGSFITA-SKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS--LDTPIEFLTEMRKATFKI  195 (491)
Q Consensus       122 -~~-~~~~-g~~~l~~~-~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~vdl~~~~~~~~~~~  195 (491)
                       .. ..+. |..++.++ +|+.|+.+||+....+++...++.....-.++++.+++.+.+  .+++||+...+..++.++
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHH
Confidence             12 2333 55677776 899999999999888999998888888778899999888763  225899999999999999


Q ss_pred             HHHHhcCCCCchhh----hhHHHHHHHHHhcccC-----CCC---CCCCCc-chH-HHHHHHHHHHHHhHHHHHHHHHch
Q 011210          196 IANIFLGSSSDSVI----GSVEKHYIDYAHGLIS-----PFP---INLPGF-SFH-KAMKARDMLGEILQPVLNERRAMK  261 (491)
Q Consensus       196 ~~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~-----~~~---~~~p~~-~~~-~~~~~~~~l~~~~~~~i~~~~~~~  261 (491)
                      +++++||.+++...    .++.+.+......+..     ++|   .++++. ... +......++.+++++.|+++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999976532    2244444444432222     233   123321 133 344445568999999999998865


Q ss_pred             hhhccccccHHHHHHhhhhhcCCC-CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCC
Q 011210          262 SDEQKGRKGLIDLLMEVEDENGTK-LDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPS  340 (491)
Q Consensus       262 ~~~~~~~~~~~~~ll~~~~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  340 (491)
                       ..++ +.|+++.+++..++++.. ++++++...+.++++||+|||++|+.|++.+|++||++|+|+++||++++|.   
T Consensus       259 -~~~~-~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~---  333 (489)
T KOG0156|consen  259 -GDEE-GRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGK---  333 (489)
T ss_pred             -ccCC-CCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---
Confidence             2122 379999999987654333 8999999999999999999999999999999999999999999999999984   


Q ss_pred             CCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCC
Q 011210          341 TQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRW  419 (491)
Q Consensus       341 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf  419 (491)
                      ++. ++.+|+.+||||+|||+|++|++|++|. ++|.+++|+.|+||.|||||.|+++.|++||||++|+||++|+||||
T Consensus       334 ~r~-v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERF  412 (489)
T KOG0156|consen  334 GRL-VSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERF  412 (489)
T ss_pred             CCC-CChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhh
Confidence            344 8999999999999999999999999995 78999999999999999999999999999999999999999999999


Q ss_pred             CCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCC
Q 011210          420 DNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNP  467 (491)
Q Consensus       420 l~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  467 (491)
                      ++.+   ....+++|||.|+|.|||..+|++++.++++.|+++|||++.++
T Consensus       413 l~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  413 LDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             cCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            9962   35788999999999999999999999999999999999998865


No 2  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1e-77  Score=594.57  Aligned_cols=450  Identities=54%  Similarity=0.971  Sum_probs=380.0

Q ss_pred             cCCCcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccc
Q 011210           38 LGEMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKM  117 (491)
Q Consensus        38 ~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~  117 (491)
                      .++.+.++||||++||++|+++++......+++++++.+++++||+.++|++++++.++++++||+.+++++.+++.|.+
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~~f~~  115 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDDAFEP  115 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCCcccc
Confidence            35556689999999999999998875444568899999999999973379999999999999999999999998766666


Q ss_pred             cccccccccccccceeeccchhHHHHHHhhhccCc-ChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHH
Q 011210          118 GYPTSTNKLTFRGSFITASKEGQKRIRKLATSPLK-GHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKII  196 (491)
Q Consensus       118 ~~~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~  196 (491)
                      .++......+|...+...+|+.|+++|+.+.+ .| ++++++.+.+.+.+.+.++++.+...+ .+|+.+.+..++++++
T Consensus       116 ~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~-~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~vi  193 (490)
T PLN02302        116 GWPESTVELIGRKSFVGITGEEHKRLRRLTAA-PVNGPEALSTYIPYIEENVKSCLEKWSKMG-EIEFLTELRKLTFKII  193 (490)
T ss_pred             CCchhHHHHhccccccccCcHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHhcCCC-CEehHHHHHHHHHHHH
Confidence            55543333456555666799999999999999 66 578899999999999999999987666 7999999999999999


Q ss_pred             HHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc-cccccHHHHH
Q 011210          197 ANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ-KGRKGLIDLL  275 (491)
Q Consensus       197 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~~~~~l  275 (491)
                      ++++||.+.+.....+.+.+..+...+.. ++..+|...+.+..++.+.+.+++.+.++++++....+. ....|+++.+
T Consensus       194 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l  272 (490)
T PLN02302        194 MYIFLSSESELVMEALEREYTTLNYGVRA-MAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLL  272 (490)
T ss_pred             HHHHcCCCChHHHHHHHHHHHHHHHHhhh-CCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHH
Confidence            99999998665444444444333333222 334556555566677788899999999988876533221 1257999999


Q ss_pred             HhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHH
Q 011210          276 MEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEY  355 (491)
Q Consensus       276 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~  355 (491)
                      ++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+....+...++.+++++|||
T Consensus       273 l~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpy  352 (490)
T PLN02302        273 LDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEY  352 (490)
T ss_pred             HhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChH
Confidence            98766566678999999999999999999999999999999999999999999999999874332222379999999999


Q ss_pred             HHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCC
Q 011210          356 LAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGG  435 (491)
Q Consensus       356 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G  435 (491)
                      |+|||+|++|++|+++..+|.+.+|++++|+.||||+.|.++.+++|||+++|+||++|+||||++....+..++|||.|
T Consensus       353 l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G  432 (490)
T PLN02302        353 LSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLG  432 (490)
T ss_pred             HHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCCCCCCccCCCCC
Confidence            99999999999999998899999999999999999999999999999999999999999999999865566789999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          436 SRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       436 ~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      +|.|+|++||.+|++++++.++++|++++.+++.++.+.+...|.+++++++++|
T Consensus       433 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  487 (490)
T PLN02302        433 SRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKV  487 (490)
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEec
Confidence            9999999999999999999999999999987766677777899999999999876


No 3  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.2e-77  Score=589.43  Aligned_cols=438  Identities=28%  Similarity=0.574  Sum_probs=356.5

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      ...++||||+++|++||++.+......+.++.++.+++++||+  +|++++|+.++|+++||+++++++.+++ .+...+
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~--v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGK--IYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcc--cccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            3457899999999999987665322224677889999999999  9999999999999999999999998865 454444


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHH-HHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVV-YIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~  198 (491)
                      +.....++|..+++..+|+.|+++|+++.+ .|++.+++. +.+.+.+.+..+++.|..++ .+|+.+.+..++++++++
T Consensus       113 ~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~vd~~~~~~~~~~~vi~~  190 (490)
T PLN02500        113 PRSIGGILGKWSMLVLVGDMHRDMRSISLN-FLSHARLRTHLLKEVERHTLLVLDSWKENS-TFSAQDEAKKFTFNLMAK  190 (490)
T ss_pred             chHHHHHhCcccccccCCHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHhCCCC-CEEehHHHHHHHHHHHHH
Confidence            433333455446777899999999999998 889988887 57788888888888886554 799999999999999999


Q ss_pred             HhcCCCCchh-hhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc--cccccHHHHH
Q 011210          199 IFLGSSSDSV-IGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ--KGRKGLIDLL  275 (491)
Q Consensus       199 ~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~--~~~~~~~~~l  275 (491)
                      ++||.+.+.. ...+.+.+..+...... .+.++|...+++..++.+.+.+++.+.++++++....+.  ..+.|+++.+
T Consensus       191 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l  269 (490)
T PLN02500        191 HIMSMDPGEEETEQLKKEYVTFMKGVVS-APLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWV  269 (490)
T ss_pred             HHhCCCCCchHHHHHHHHHHHHHhhhhc-chhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHH
Confidence            9999875432 23333344443333222 334455544566777888899999999988776433221  1246899999


Q ss_pred             HhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC-CCCCCCCHHHHhccH
Q 011210          276 MEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP-STQKGLTIEEIKQME  354 (491)
Q Consensus       276 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-~~~~~~~~~~l~~lp  354 (491)
                      ++..     .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+... .+...++.+++++||
T Consensus       270 l~~~-----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lp  344 (490)
T PLN02500        270 LKHS-----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKME  344 (490)
T ss_pred             Hhcc-----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCH
Confidence            9742     4899999999999999999999999999999999999999999999999875321 111228999999999


Q ss_pred             HHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC----------
Q 011210          355 YLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT----------  424 (491)
Q Consensus       355 ~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~----------  424 (491)
                      ||+|||+|++|++|++|.++|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||++.+.          
T Consensus       345 yl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~  424 (490)
T PLN02500        345 FTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSA  424 (490)
T ss_pred             HHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCC
Confidence            9999999999999999988999999999999999999999999999999999999999999999997431          


Q ss_pred             CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEec
Q 011210          425 RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       425 ~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      .+..++|||.|+|.|+|+++|++|+++++++|+++|+|++.+++.... .+..++++|++|++++
T Consensus       425 ~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~l~~~~~~  488 (490)
T PLN02500        425 TTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FPFVDFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cccccCCCCceEEEEe
Confidence            346899999999999999999999999999999999999876654333 3455677899999986


No 4  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3.7e-76  Score=575.97  Aligned_cols=430  Identities=29%  Similarity=0.585  Sum_probs=361.5

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccccc
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPTS  122 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~~  122 (491)
                      ++||||+++|++||++.+.+     ++..++.+++++||+  +|++++++.++++++||+.+++++.++. .+.+.++..
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~-----~~~~~~~~~~~~yG~--i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  103 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLK-----QGPDFMKNQRLRYGS--FFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQS  103 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHH-----hhHHHHHHHHHHhcc--CccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHH
Confidence            67899999999999988764     567899999999999  9999999999999999999999998754 444444433


Q ss_pred             ccccccccceeeccchhHHHHHHhhhccCcChhhhHH-HHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhc
Q 011210          123 TNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVV-YIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFL  201 (491)
Q Consensus       123 ~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  201 (491)
                      ...++|..+++..+|+.|+++|+.+.+ .|++..++. +.+.+.+.+.+++++|..++ ++|+.+.+..++.+++++++|
T Consensus       104 ~~~~lg~~~~~~~~g~~w~~~R~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~  181 (463)
T PLN02774        104 MLDILGTCNIAAVHGSTHRYMRGSLLS-LISPTMIRDHLLPKIDEFMRSHLSGWDGLK-TIDIQEKTKEMALLSALKQIA  181 (463)
T ss_pred             HHHHhCccchhhcCCHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhhCCCC-CEEeeHHHHHHHHHHHHHHHc
Confidence            334566556777799999999999998 899988875 78999999999999986544 799999999999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhh
Q 011210          202 GSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDE  281 (491)
Q Consensus       202 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~  281 (491)
                      |...+.....+.+.+..+...... ++.++|...+++..++.+.+.+++.+.++++++...    ..+|+++.+++.. .
T Consensus       182 g~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~d~l~~ll~~~-~  255 (463)
T PLN02774        182 GTLSKPISEEFKTEFFKLVLGTLS-LPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGE----THTDMLGYLMRKE-G  255 (463)
T ss_pred             CCCChHHHHHHHHHHHHHhccccc-CCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCC----CcccHHHHHHhCc-c
Confidence            987554444444555444433322 555667655667778889999999999988775421    1569999999743 2


Q ss_pred             cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHH
Q 011210          282 NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIA  361 (491)
Q Consensus       282 ~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  361 (491)
                      ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+...++.. ++.+++++||||+|||+
T Consensus       256 ~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~-~~~~~l~~lpyl~a~ik  334 (463)
T PLN02774        256 NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDP-IDWNDYKSMRFTRAVIF  334 (463)
T ss_pred             CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCC-CCHHHHhcCcHHHHHHH
Confidence            33358999999999999999999999999999999999999999999999999864322233 89999999999999999


Q ss_pred             HhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCCCCc
Q 011210          362 ETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT-RPGSFIPFGGGSRICP  440 (491)
Q Consensus       362 E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~-~~~~~~~Fg~G~r~C~  440 (491)
                      |+||++|+++.+.|.+.+|++++|+.||||+.|+++.+.+||||++|+||++|+||||++.+. ....++|||+|+|.||
T Consensus       335 E~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~  414 (463)
T PLN02774        335 ETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCP  414 (463)
T ss_pred             HHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCC
Confidence            999999999988899999999999999999999999999999999999999999999997542 2346999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          441 GADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       441 G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      |+++|.+|++++++.|+++|+|++.++. +....++..|++|++|+++++
T Consensus       415 G~~~A~~e~~~~la~Ll~~f~~~~~~~~-~~~~~~~~~p~~g~~~~~~~~  463 (463)
T PLN02774        415 GKELGIVEISTFLHYFVTRYRWEEVGGD-KLMKFPRVEAPNGLHIRVSPY  463 (463)
T ss_pred             cHHHHHHHHHHHHHHHHHhceEEECCCC-ccccCCCCCCCCCceEEeeeC
Confidence            9999999999999999999999997654 334456778999999999864


No 5  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.5e-76  Score=574.19  Aligned_cols=430  Identities=34%  Similarity=0.609  Sum_probs=365.1

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      ++.+.||||+++|++||++.+..    ++++.++.+++++||+  +++++++++++++++||+.+++++.++. .+....
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~--i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~  105 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYS----QDPNVFFASKQKRYGS--VFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTF  105 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHh----cCHHHHHHHHHHHhhh--hheeeecCCceEEEcCHHHHHHHHhCCCCcccccC
Confidence            45688999999999999887653    5899999999999999  9999999999999999999999998765 443322


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANI  199 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~  199 (491)
                      ........|..++++.+|+.|+++||++.+ .|++++++.+.+.+.+.++++++.|.. + ++|+.+++..+++++++.+
T Consensus       106 ~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~~~~~~~~-~-~v~~~~~~~~~~~~v~~~~  182 (463)
T PLN02196        106 PASKERMLGKQAIFFHQGDYHAKLRKLVLR-AFMPDAIRNMVPDIESIAQESLNSWEG-T-QINTYQEMKTYTFNVALLS  182 (463)
T ss_pred             chHHHHHcCcccccccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHcCCC-C-eEEeHHHHHHHHHHHHHHH
Confidence            222223456567788899999999999999 899999999999999999999999853 3 7999999999999999999


Q ss_pred             hcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhh
Q 011210          200 FLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVE  279 (491)
Q Consensus       200 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~  279 (491)
                      +||.+.......+.+.+......+. .+|..+|....++..++.+.+.+++.+.+++++++..    ...|+++.+++. 
T Consensus       183 ~fG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~----~~~d~l~~ll~~-  256 (463)
T PLN02196        183 IFGKDEVLYREDLKRCYYILEKGYN-SMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGS----SHNDLLGSFMGD-  256 (463)
T ss_pred             HcCCCCchHHHHHHHHHHHHhcchh-cccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCC----CcccHHHHHHhc-
Confidence            9999854433344444443333222 2555566544567778888999999999988765422    156899998853 


Q ss_pred             hhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHH
Q 011210          280 DENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKV  359 (491)
Q Consensus       280 ~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~  359 (491)
                         +..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+....++. ++.+++++||||+||
T Consensus       257 ---~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~-~~~~~~~~l~yl~av  332 (463)
T PLN02196        257 ---KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGES-LTWEDTKKMPLTSRV  332 (463)
T ss_pred             ---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCC-CCHHHHhcChHHHHH
Confidence               2358999999999999999999999999999999999999999999999999864332334 899999999999999


Q ss_pred             HHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 011210          360 IAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRIC  439 (491)
Q Consensus       360 i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C  439 (491)
                      |+|++|++|++++..|.+.+|++++||.|||||.|+++.+++|||+++|+||++|+||||++. ..+..++|||.|+|.|
T Consensus       333 i~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~-~~~~~~lpFG~G~r~C  411 (463)
T PLN02196        333 IQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA-PKPNTFMPFGNGTHSC  411 (463)
T ss_pred             HHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC-CCCCcccCcCCCCCCC
Confidence            999999999999888999999999999999999999999999999999999999999999974 3467899999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          440 PGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       440 ~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      +|+.+|++|++++++.|+++|+|++.+++..+.+.++..|.++++|++++.
T Consensus       412 ~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        412 PGNELAKLEISVLIHHLTTKYRWSIVGTSNGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             chHHHHHHHHHHHHHHHHHhcEEEEcCCCCceEEcccccCCCCceEEEecC
Confidence            999999999999999999999999987766677777889999999999874


No 6  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.4e-75  Score=545.27  Aligned_cols=448  Identities=23%  Similarity=0.364  Sum_probs=349.6

Q ss_pred             HHHHHHhhcchhhhccccCCCcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEe
Q 011210           21 FVFGVLRRVNEWYHCGKLGEMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVV  100 (491)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~  100 (491)
                      ++++..+...+|.+.+.         |||+++|++||+..+..   .+....+..+...++|+  ++.+..+.+|.++|+
T Consensus        17 ~y~~~~~~~~yw~rrGi---------~~~~p~p~~Gn~~~~~~---~~~~~~~~~~~~~~~~~--~~G~y~~~~p~l~v~   82 (499)
T KOG0158|consen   17 LYLWLRWTYSYWRRRGI---------PGPKPLPFLGNLPGMLK---RERPGDLLLDIYTKYRP--VVGIYEGRQPALLVS   82 (499)
T ss_pred             HHHHHHhhhhhhccCCC---------CCCCCCCcEecHHHHHh---ccCcHHHHHHHHhcCCC--EEEEEecCCcceEec
Confidence            33333334457776633         88889999999999885   23334455555555588  999999999999999


Q ss_pred             ChHhHhHHhcCC-ccccccc--cccccc-cccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh
Q 011210          101 APEACKQVFLDD-ENFKMGY--PTSTNK-LTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA  176 (491)
Q Consensus       101 ~~~~~~~i~~~~-~~~~~~~--~~~~~~-~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  176 (491)
                      ||+.+++|+.++ ++|....  ...-.. -.+..++++.+|+.||++|..++| .|+..+++.+.+.+.+..+++++.+.
T Consensus        83 D~elik~I~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP-~Fts~kmk~m~~t~~~~~~~l~~~l~  161 (499)
T KOG0158|consen   83 DPELIKEILIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSP-TFTSGKLKKMFPTMEEVGDELVRHLR  161 (499)
T ss_pred             CHHHHHHHHHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhcc-ccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999975 3555421  111111 223367888899999999999999 99999999999999999999999885


Q ss_pred             cCC---CCeehHHHHHHHHHHHHHHHhcCCCCchhhh---hHHHHHHHHHhcccCCCCC------CCCCcc-----hHHH
Q 011210          177 SLD---TPIEFLTEMRKATFKIIANIFLGSSSDSVIG---SVEKHYIDYAHGLISPFPI------NLPGFS-----FHKA  239 (491)
Q Consensus       177 ~~~---~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~p~~~-----~~~~  239 (491)
                      ...   ..+++.+.+..++.|+|++++||.+.++..+   .+..........+....+.      ..|...     ....
T Consensus       162 ~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~  241 (499)
T KOG0158|consen  162 RKSEGGQEGEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFP  241 (499)
T ss_pred             HhhcccCCccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccCh
Confidence            432   2789999999999999999999998766442   1211111111110000111      111100     0112


Q ss_pred             HHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhh--cC---C-CCCHHHHHHHHHHHHhcccccHHHHHHHH
Q 011210          240 MKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDE--NG---T-KLDDLDIIDMLISFLSAGHESSAHIATWA  313 (491)
Q Consensus       240 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~---~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~  313 (491)
                      ....+.+.+.+.+.++.|.++.    ..++|+++.+++++.+  .+   . .++.++|+++++.+++||.||||++++++
T Consensus       242 ~~~~~~~~~~v~~~v~~R~~~~----~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~  317 (499)
T KOG0158|consen  242 EDVTDFFRKLVNSRVEQREKEN----IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFA  317 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC----CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence            3444555666666666663322    1278999999998743  11   1 49999999999999999999999999999


Q ss_pred             HHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeC-CeEeCCCC
Q 011210          314 LIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQ-GYFIPKGW  392 (491)
Q Consensus       314 l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~-g~~ip~G~  392 (491)
                      +|+|++|||+|+|||+||+++..+.   .. +++|.+++|+||++||+||||+||+++.+.|.+++|++++ ++.||||+
T Consensus       318 lYeLA~~PdvQ~kLreEI~~~~~~~---~~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~  393 (499)
T KOG0158|consen  318 LYELAKNPDVQDKLREEIDEVLEEK---EG-LTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGT  393 (499)
T ss_pred             HHHHhcChHHHHHHHHHHHHHhccc---CC-CCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCC
Confidence            9999999999999999999996532   22 9999999999999999999999999999999999999999 99999999


Q ss_pred             EEEEcccccccCCCCCCCCCCCCCCCCCCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC
Q 011210          393 KVLVYNRGVHYNPENYPDPKQFDPSRWDNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC  469 (491)
Q Consensus       393 ~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~  469 (491)
                      .|.++.+++||||++||||++|+||||.+.+   ..+..|+|||.|||.|+|.+||.+|+|+.|++||++|+++..+...
T Consensus       394 ~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~  473 (499)
T KOG0158|consen  394 PVMIPTYALHHDPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTI  473 (499)
T ss_pred             EEEeecccccCCcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCccc
Confidence            9999999999999999999999999999765   3678999999999999999999999999999999999999887332


Q ss_pred             C-ccc---cccCCCCCCCeEEEeccC
Q 011210          470 P-AEY---LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       470 ~-~~~---~~~~~~~~~~~~~~~~~~  491 (491)
                      + ...   ..+..|.+|+.+++++|.
T Consensus       474 ~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  474 IPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             CcccCCccceeeecCCceEEEEEeCC
Confidence            2 223   236999999999999984


No 7  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=8.6e-75  Score=565.12  Aligned_cols=439  Identities=30%  Similarity=0.567  Sum_probs=366.3

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      .+.++||||.++|++||++.+...-+..+++.++.+++++||+  ||++++|+.++++++||++++++|.+++ .+...+
T Consensus         4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~--i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGK--VFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhh--eeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            4567899999999999998875321234689999999999999  9999999999999999999999998875 444333


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHH-HHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVV-YIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~  198 (491)
                      +.....++|..+++..+|+.|+++|+++.+ .|+..++.. +.+.+.+.+.++++.|.+++ ++|+.+.+..++++++++
T Consensus        82 ~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vi~~  159 (452)
T PLN03141         82 PKSLTELMGKSSILLINGSLQRRVHGLIGA-FLKSPHLKAQITRDMERYVSESLDSWRDDP-PVLVQDETKKIAFEVLVK  159 (452)
T ss_pred             chhHHHHhCcccccccCcHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhccCCC-CEEhHHHHHHHHHHHHHH
Confidence            333445567566888899999999999998 777777765 46777788888888775444 899999999999999999


Q ss_pred             HhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhcc----ccccHHHH
Q 011210          199 IFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQK----GRKGLIDL  274 (491)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~----~~~~~~~~  274 (491)
                      ++||.+.......+.+.+..+...... +|.++|...+.+..++.+.+.+++.++|+++++....+.+    ...|+++.
T Consensus       160 ~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~  238 (452)
T PLN03141        160 ALISLEPGEEMEFLKKEFQEFIKGLMS-LPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDV  238 (452)
T ss_pred             HHcCCCchHHHHHHHHHHHHHhhhHHh-CccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHH
Confidence            999987655445555555555554443 5556666555667778899999999999888765432211    13689999


Q ss_pred             HHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC-CCCCCCCHHHHhcc
Q 011210          275 LMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP-STQKGLTIEEIKQM  353 (491)
Q Consensus       275 ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~-~~~~~~~~~~l~~l  353 (491)
                      +++..   +..++++++.+++..+++||+|||+.+++|++++|+.||++|+++++|++++.+... .+.. ++.+++.+|
T Consensus       239 ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~-~~~~~~~~l  314 (452)
T PLN03141        239 LLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEP-LYWTDYMSL  314 (452)
T ss_pred             HHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCC-CCHHHHhcc
Confidence            99754   235899999999999999999999999999999999999999999999998875322 2233 899999999


Q ss_pred             HHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 011210          354 EYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFG  433 (491)
Q Consensus       354 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg  433 (491)
                      |||+|||+|++|++|++++++|.+.+|++++||.||||+.|+++.+++|+|+++|+||++|+||||++.+..+..++|||
T Consensus       315 pyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG  394 (452)
T PLN03141        315 PFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNSSFTPFG  394 (452)
T ss_pred             HHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCCCCCCCCCC
Confidence            99999999999999999888999999999999999999999999999999999999999999999998655567899999


Q ss_pred             CCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          434 GGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       434 ~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      +|+|.|+|++||.+|+++++|.|+++|+|++.+++  ....++.+|.++++|++++|
T Consensus       395 ~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  449 (452)
T PLN03141        395 GGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT--IVNFPTVRMKRKLPIWVTRI  449 (452)
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC--eeecccccCCCCceEEEEeC
Confidence            99999999999999999999999999999986543  23346889999999999987


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.6e-74  Score=571.87  Aligned_cols=440  Identities=22%  Similarity=0.322  Sum_probs=342.1

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcC-CcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYG-RKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      +.++||||+++|++||++++..   ....+.++.+|.++|| +  |+++++|+.++++|+||+.++++|.+++ .+.++.
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~---~~~~~~~l~~~~~~yg~~--i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp  129 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLK---NRPVFRWLHSLMKELNTE--IACVRLGNTHVIPVTCPKIAREIFKQQDALFASRP  129 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhcc---CCcHhHHHHHHHHHhCCc--eEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCC
Confidence            4579999999999999988753   1224788999999999 7  9999999999999999999999999865 455443


Q ss_pred             ccccccccccc---ceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHH
Q 011210          120 PTSTNKLTFRG---SFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATF  193 (491)
Q Consensus       120 ~~~~~~~~g~~---~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~  193 (491)
                      .......+|..   .++..+|+.|+++||++.+.++++.....+.+.+.++++.+++.+.   .+++++|+.+.+..+++
T Consensus       130 ~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  209 (543)
T PLN02971        130 LTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCG  209 (543)
T ss_pred             cccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHH
Confidence            22333334422   3666789999999999976477766677788888888777776652   33447999999999999


Q ss_pred             HHHHHHhcCCCCchh--------hhhHHHHHHHHHhcc---c-CCCCCCCCCc------ch-HHHHHHHHHHHHHhHHHH
Q 011210          194 KIIANIFLGSSSDSV--------IGSVEKHYIDYAHGL---I-SPFPINLPGF------SF-HKAMKARDMLGEILQPVL  254 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~--------~~~~~~~~~~~~~~~---~-~~~~~~~p~~------~~-~~~~~~~~~l~~~~~~~i  254 (491)
                      +++++++||.+....        ..+..+.+..+....   . ..++.++|..      .. +...+..+.+.+++.+.+
T Consensus       210 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  289 (543)
T PLN02971        210 NAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPII  289 (543)
T ss_pred             HHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            999999999874211        111112222222111   0 0011122221      11 233445667788888888


Q ss_pred             HHHHHchhhhcc-ccccHHHHHHhhhhhcCC-CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 011210          255 NERRAMKSDEQK-GRKGLIDLLMEVEDENGT-KLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQE  332 (491)
Q Consensus       255 ~~~~~~~~~~~~-~~~~~~~~ll~~~~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  332 (491)
                      +++++....+.. ...|+++.+++..++++. .++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+
T Consensus       290 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        290 DERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            887654322211 146999999987544333 489999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCC
Q 011210          333 DIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDP  411 (491)
Q Consensus       333 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p  411 (491)
                      ++++.   ++. ++.+++++|||++|||+|+||++|++|. ++|.+.+|++++||.|||||.|+++.|++||||++|+||
T Consensus       370 ~v~g~---~~~-~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP  445 (543)
T PLN02971        370 RVVGK---ERF-VQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDP  445 (543)
T ss_pred             HHhCC---CCC-CCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCc
Confidence            99873   233 8999999999999999999999999986 789999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC------CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccc---cCCCCCC
Q 011210          412 KQFDPSRWDNHT------TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLP---VPRPSDQ  482 (491)
Q Consensus       412 ~~F~PeRfl~~~------~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~---~~~~~~~  482 (491)
                      ++|+||||++.+      ..+..++|||.|+|.|+|++||++|+++++|+|+++|+|++.+++....+.+   ...-+.+
T Consensus       446 ~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  525 (543)
T PLN02971        446 LSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSKP  525 (543)
T ss_pred             cccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcCccccccc
Confidence            999999999743      1345799999999999999999999999999999999999876554444432   3324457


Q ss_pred             CeEEEecc
Q 011210          483 CLAKVVGF  490 (491)
Q Consensus       483 ~~~~~~~~  490 (491)
                      +.+.+++|
T Consensus       526 ~~~~~~~~  533 (543)
T PLN02971        526 LVMVGELR  533 (543)
T ss_pred             ceeeeeec
Confidence            78877765


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.3e-73  Score=563.80  Aligned_cols=438  Identities=19%  Similarity=0.256  Sum_probs=349.3

Q ss_pred             CCCCCCCCCccccccHHHHhhhh--------------cCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHh
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFK--------------SSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVF  109 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~--------------~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~  109 (491)
                      +.||||+++|++||++++.....              .++....+.+|+++||+  +|++++|+.++++++||+.+++++
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGK--RFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCC--eEEEccCCccEEEECCHHHHHHHH
Confidence            45799999999999988763100              12334467899999999  999999999999999999999999


Q ss_pred             cCCcccccccc-c--cccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc----CCCCe
Q 011210          110 LDDENFKMGYP-T--STNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS----LDTPI  182 (491)
Q Consensus       110 ~~~~~~~~~~~-~--~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~v  182 (491)
                      .++..+..... .  ......| .++++.+|+.|+++||++.+ .|+.++++.+.+.+.++++++++.+..    ++.++
T Consensus       120 ~~~~~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        120 TKYNTVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAP-AFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             hcCCCCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            88653333221 1  1122345 56778899999999999998 899999999999999999999998842    22479


Q ss_pred             ehHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHH---hccc--CCCCC--CCCCcchHHHHHHHHHHHHHhHHHHH
Q 011210          183 EFLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYA---HGLI--SPFPI--NLPGFSFHKAMKARDMLGEILQPVLN  255 (491)
Q Consensus       183 dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~---~~~~--~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~  255 (491)
                      |+.+.+..++++++++++||.+.+.. ..+.+.+..+.   ....  ..+|.  ++|....++..+..+.+.+++.+.|+
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~  276 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKG-KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQ  276 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccc-hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999986432 12222221111   1110  01221  23332233445567788889999998


Q ss_pred             HHHHchhhhc--cccccHHHHHHhhhhh---cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHH
Q 011210          256 ERRAMKSDEQ--KGRKGLIDLLMEVEDE---NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEE  330 (491)
Q Consensus       256 ~~~~~~~~~~--~~~~~~~~~ll~~~~~---~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~E  330 (491)
                      ++++....+.  ....|+++.+++..++   ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|
T Consensus       277 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~E  356 (516)
T PLN02290        277 SRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAE  356 (516)
T ss_pred             HHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            8876443221  1146899999976432   2234789999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCC-C
Q 011210          331 QEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENY-P  409 (491)
Q Consensus       331 i~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~  409 (491)
                      ++++++.    .. ++.+++++||||+|||+||||++|+++.++|.+.+|++++|+.|||||.|+++.+++||||++| +
T Consensus       357 i~~v~~~----~~-~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~  431 (516)
T PLN02290        357 VAEVCGG----ET-PSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGK  431 (516)
T ss_pred             HHHHhCC----CC-CCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCC
Confidence            9999874    23 8999999999999999999999999998999999999999999999999999999999999999 8


Q ss_pred             CCCCCCCCCCCCCC-CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEE
Q 011210          410 DPKQFDPSRWDNHT-TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKV  487 (491)
Q Consensus       410 ~p~~F~PeRfl~~~-~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~  487 (491)
                      ||++|+||||++.+ .....++|||.|+|.|+|+.||++|++++++.|+++|++++.++. .......+..|.++++|++
T Consensus       432 dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~  511 (516)
T PLN02290        432 DANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCL  511 (516)
T ss_pred             ChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCeEEE
Confidence            99999999999653 234679999999999999999999999999999999999987652 2222345789999999999


Q ss_pred             eccC
Q 011210          488 VGFK  491 (491)
Q Consensus       488 ~~~~  491 (491)
                      ++|.
T Consensus       512 ~~~~  515 (516)
T PLN02290        512 KPLN  515 (516)
T ss_pred             EeCC
Confidence            9874


No 10 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=6.1e-73  Score=560.51  Aligned_cols=438  Identities=22%  Similarity=0.385  Sum_probs=350.5

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      ++.++||||.++|++||++.+..     +++.++.+|+++||+  +|++++|+.++++++||+.+++++.++. .+.++.
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~  103 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGP-----KPHHTMAALAKTYGP--LFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRP  103 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCC-----chhHHHHHHHHHhCC--eeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCC
Confidence            34578999999999999988753     688999999999999  9999999999999999999999998754 454433


Q ss_pred             cccccccc---cccceeeccchhHHHHHHhhh-ccCcChhhhHHHHHHHHHHHHHHHhhhhc--CCCCeehHHHHHHHHH
Q 011210          120 PTSTNKLT---FRGSFITASKEGQKRIRKLAT-SPLKGHKAIVVYIDNIEEIVIKSLKGWAS--LDTPIEFLTEMRKATF  193 (491)
Q Consensus       120 ~~~~~~~~---g~~~l~~~~g~~~~~~Rr~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~vdl~~~~~~~~~  193 (491)
                      +......+   +...++..+|+.|+++||++. + .|+.++++.+.+.+.++++++++.+..  +++++|+.+.+..+++
T Consensus       104 ~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~  182 (517)
T PLN02687        104 PNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVH-LFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTT  182 (517)
T ss_pred             CccchhhhccCCceeEeCCCCHHHHHHHHHHHHH-hCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHH
Confidence            22211111   334566668999999999998 6 899999999999999999999998842  3448999999999999


Q ss_pred             HHHHHHhcCCCCch-----hhhhHHHHHHHHHhcc--c---CCCCC--CCCCc-chHHHHHHHHHHHHHhHHHHHHHHHc
Q 011210          194 KIIANIFLGSSSDS-----VIGSVEKHYIDYAHGL--I---SPFPI--NLPGF-SFHKAMKARDMLGEILQPVLNERRAM  260 (491)
Q Consensus       194 ~~~~~~~fG~~~~~-----~~~~~~~~~~~~~~~~--~---~~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~  260 (491)
                      ++++.++||.+...     ....+.+.+..+....  .   .++|.  +++.. ...+..+..+.+.+++.+.++++++.
T Consensus       183 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        183 NALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999987432     1223444443333211  1   11221  12111 13345566778888899999888765


Q ss_pred             hhhhccccccHHHHHHhhhhh-----cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Q 011210          261 KSDEQKGRKGLIDLLMEVEDE-----NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDII  335 (491)
Q Consensus       261 ~~~~~~~~~~~~~~ll~~~~~-----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  335 (491)
                      ...+.....|+++.+++..++     ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        263 GQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence            432112257999999987543     234699999999999999999999999999999999999999999999999998


Q ss_pred             hcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCC
Q 011210          336 KKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQF  414 (491)
Q Consensus       336 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  414 (491)
                      +.   ++. ++.+++++||||+|||+|+||++|+++. ++|.+.+|++++|+.||+||.|.++.+++||||++|+||++|
T Consensus       343 ~~---~~~-~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F  418 (517)
T PLN02687        343 GR---DRL-VSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEF  418 (517)
T ss_pred             CC---CCC-CCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccC
Confidence            63   233 8999999999999999999999999986 789999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC--------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC--Cccc----cccCCCC
Q 011210          415 DPSRWDNHTT--------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC--PAEY----LPVPRPS  480 (491)
Q Consensus       415 ~PeRfl~~~~--------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~~----~~~~~~~  480 (491)
                      +||||++...        ....++|||.|+|.|+|++||++|+++++|+|+++|++++.++..  +...    .....+.
T Consensus       419 ~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (517)
T PLN02687        419 RPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRA  498 (517)
T ss_pred             CchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecC
Confidence            9999996431        234789999999999999999999999999999999999875432  2221    2245566


Q ss_pred             CCCeEEEecc
Q 011210          481 DQCLAKVVGF  490 (491)
Q Consensus       481 ~~~~~~~~~~  490 (491)
                      .++.+++++|
T Consensus       499 ~~~~~~~~~R  508 (517)
T PLN02687        499 VPLMVHPRPR  508 (517)
T ss_pred             CCeEEeeccC
Confidence            7888888876


No 11 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.3e-72  Score=545.50  Aligned_cols=435  Identities=29%  Similarity=0.581  Sum_probs=353.0

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      ..++||||.++|++||++++.......+++.++.+++++||+  ++++++++.++++++||+.+++++.+++ .+...++
T Consensus        28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~--v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGS--LFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhch--hhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            346899999999999998875321124688899999999999  9999999999999999999999998865 4544444


Q ss_pred             ccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHH-HHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHH
Q 011210          121 TSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYID-NIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANI  199 (491)
Q Consensus       121 ~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~  199 (491)
                      .....++|..+++..+|+.|+++|+++.+ .++.+.+..+.. .+.+.++..++.|.  + ++|+.+.+.++++++++++
T Consensus       106 ~~~~~~lg~~~l~~~~g~~wr~~R~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~v~~~~~~~~~t~~vi~~~  181 (472)
T PLN02987        106 GSISNLLGKHSLLLMKGNLHKKMHSLTMS-FANSSIIKDHLLLDIDRLIRFNLDSWS--S-RVLLMEEAKKITFELTVKQ  181 (472)
T ss_pred             HHHHHHhCcccccccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHhhc--c-ceehHHHHHHHHHHHHHHH
Confidence            34445567567888899999999999876 655555555432 24444555556553  3 7999999999999999999


Q ss_pred             hcCCCCchhhhhHHHHHHHHHhcccC-CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhh
Q 011210          200 FLGSSSDSVIGSVEKHYIDYAHGLIS-PFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEV  278 (491)
Q Consensus       200 ~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~  278 (491)
                      +||.+.+.....+.+.+......+.. .+|++  ...+++..++++.+.+++.+.++++++....+....+|+++.+++.
T Consensus       182 ~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~  259 (472)
T PLN02987        182 LMSFDPGEWTESLRKEYVLVIEGFFSVPLPLF--STTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLAS  259 (472)
T ss_pred             HcCCCChHHHHHHHHHHHHHHhhhhcCCCcCC--CchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhc
Confidence            99987654334444444444333222 12322  2345677888999999999999998765433222257999999976


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHH
Q 011210          279 EDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAK  358 (491)
Q Consensus       279 ~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a  358 (491)
                      .+    .++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++.+..+.+.. ++.+++.+|||++|
T Consensus       260 ~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~-~~~~~l~~lpyl~a  334 (472)
T PLN02987        260 DD----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYS-LEWSDYKSMPFTQC  334 (472)
T ss_pred             CC----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCC-CCHHHHhcChHHHH
Confidence            42    58999999999999999999999999999999999999999999999998764332333 89999999999999


Q ss_pred             HHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC---CCCCCcccccCC
Q 011210          359 VIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT---TRPGSFIPFGGG  435 (491)
Q Consensus       359 ~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~---~~~~~~~~Fg~G  435 (491)
                      |++|++|++|+++.++|.+.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++.+   .....++|||+|
T Consensus       335 ~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G  414 (472)
T PLN02987        335 VVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGG  414 (472)
T ss_pred             HHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCC
Confidence            99999999999988899999999999999999999999999999999999999999999999753   234679999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          436 SRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       436 ~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      +|.|+|++||.+|++++++.|+++|+|++.+++ +....++.+|.+++++++++|
T Consensus       415 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        415 PRLCPGYELARVALSVFLHRLVTRFSWVPAEQD-KLVFFPTTRTQKRYPINVKRR  468 (472)
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC-ceeecccccCCCCceEEEEec
Confidence            999999999999999999999999999987544 455567999999999999987


No 12 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.1e-73  Score=557.23  Aligned_cols=437  Identities=30%  Similarity=0.483  Sum_probs=355.0

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCC--c-cccccc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDD--E-NFKMGY  119 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~--~-~~~~~~  119 (491)
                      ...||||.+||++|++.++....  .+...++.++..+||+  +|+.++|+.++++++||+.+++|+...  . .+...+
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~  109 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGP--IFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDY  109 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCc--hhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhH
Confidence            46789999999999999997522  4688899999999998  999999999999999999999999642  2 334455


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh--cCCCCeehHHHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA--SLDTPIEFLTEMRKATFKIIA  197 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~vdl~~~~~~~~~~~~~  197 (491)
                      +..+.+++|. ++++++|+.|+++||++.+ .|+.+.+..+...+.++...+...+.  ..+..+|+.+.+.++++++++
T Consensus       110 ~~~~~~~lG~-gll~~~g~~W~~~Rk~~~~-~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  110 PESLKPWLGD-GLLFSDGEKWHKHRKLLTP-AFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHHHHhcC-ccccCCchHHHHHHhhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHH
Confidence            6677788895 8888889999999999999 99999999999998888888766653  344239999999999999999


Q ss_pred             HHhcCCCC-chhhh---hHHHHHHHHHhcccC--CCCC---CCCCc-chHHHHHHHHHHHHHhHHHHHHHHHchhhhc--
Q 011210          198 NIFLGSSS-DSVIG---SVEKHYIDYAHGLIS--PFPI---NLPGF-SFHKAMKARDMLGEILQPVLNERRAMKSDEQ--  265 (491)
Q Consensus       198 ~~~fG~~~-~~~~~---~~~~~~~~~~~~~~~--~~~~---~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~--  265 (491)
                      .++||... +.+..   ++...+......+..  .+|.   +.... ..++..++.+.+.+.++++|++|++......  
T Consensus       188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSG  267 (497)
T ss_pred             HHhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99999332 22222   233333322221111  1221   11111 3456677899999999999999997643322  


Q ss_pred             --cccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCC
Q 011210          266 --KGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQK  343 (491)
Q Consensus       266 --~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~  343 (491)
                        ....|+++.+....+   ..++++++.+++.++++||+||||++++|++++|+.||++|+|+++|++++++.....  
T Consensus       268 ~~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~--  342 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK--  342 (497)
T ss_pred             ccchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC--
Confidence              125677776332222   4799999999999999999999999999999999999999999999999999743322  


Q ss_pred             CCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee-CCeEeCCCCEEEEcccccccCCCCCC-CCCCCCCCCCCC
Q 011210          344 GLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI-QGYFIPKGWKVLVYNRGVHYNPENYP-DPKQFDPSRWDN  421 (491)
Q Consensus       344 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~PeRfl~  421 (491)
                       .+....++|+||++||+||||+|||+|.+.|.+.+|+++ +||.||||+.|+++++++|||+.+|+ ||++|+||||++
T Consensus       343 -~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  343 -WEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             -CChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence             233333479999999999999999999999999999999 58999999999999999999999996 999999999996


Q ss_pred             CC----CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEeccC
Q 011210          422 HT----TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       422 ~~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      ++    .++.+|+|||+|+|.|+|++||++|+|+++++++++|+|++..+. .......+.+|.+|++|++++|.
T Consensus       422 ~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  422 GEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence            53    236899999999999999999999999999999999999988766 45556678999999999999984


No 13 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.7e-72  Score=555.73  Aligned_cols=435  Identities=22%  Similarity=0.366  Sum_probs=341.6

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccccc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPT  121 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~  121 (491)
                      .++||||+++|++|+++.+.     ...+.++.+|+++||+  +|++++++.++++++||+.+++++.++. .+......
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~-----~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMD-----QLTHRGLANLAKQYGG--LFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcC-----CcchHHHHHHHHHhCC--eeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            47899999999999987764     2467789999999999  9999999999999999999999998764 34332211


Q ss_pred             -ccccccc--ccceeeccchhHHHHHHhh-hccCcChhhhHHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHHHHH
Q 011210          122 -STNKLTF--RGSFITASKEGQKRIRKLA-TSPLKGHKAIVVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATFKII  196 (491)
Q Consensus       122 -~~~~~~g--~~~l~~~~g~~~~~~Rr~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~~~~  196 (491)
                       ......+  ..+++..+|+.|+++||++ .+ .|+.+.+..+.+. .++++.+++.+.. .++++|+.+.+..++.+++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~-~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi  185 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMK-LFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNIT  185 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHH-hcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHH
Confidence             1112222  2456677899999999995 66 8999999888885 4578889998842 3458999999999999999


Q ss_pred             HHHhcCCCCchhhhhHHHHHHHHHhccc-----CCCCCC--C-CCcchHHHHHHHHHHHHHhHHHHHHHHHchhhh----
Q 011210          197 ANIFLGSSSDSVIGSVEKHYIDYAHGLI-----SPFPIN--L-PGFSFHKAMKARDMLGEILQPVLNERRAMKSDE----  264 (491)
Q Consensus       197 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~----  264 (491)
                      ++++||.+.+.....+.+.+..+...+.     .++|+.  + +.....+..+..+.+.+++.+.++++.++....    
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  265 (516)
T PLN02183        186 YRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADN  265 (516)
T ss_pred             HhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            9999999765543445454444332211     122321  1 211234566677788888888887776532211    


Q ss_pred             --ccccccHHHHHHhhhhhc-----------CCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHH
Q 011210          265 --QKGRKGLIDLLMEVEDEN-----------GTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQ  331 (491)
Q Consensus       265 --~~~~~~~~~~ll~~~~~~-----------~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  331 (491)
                        .....|+++.++++.+++           +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+
T Consensus       266 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei  345 (516)
T PLN02183        266 DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQEL  345 (516)
T ss_pred             ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence              111468999999865331           2258999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCC
Q 011210          332 EDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDP  411 (491)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p  411 (491)
                      +++++.   ++. ++.+++++||||+|||+|+||++|++|+..|.+.+|++++|+.|||||+|.++.+++||||++|+||
T Consensus       346 ~~v~~~---~~~-~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP  421 (516)
T PLN02183        346 ADVVGL---NRR-VEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDP  421 (516)
T ss_pred             HHHcCC---CCC-CCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCc
Confidence            999873   223 8999999999999999999999999998889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC-----CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC--Ccc----ccccCCCC
Q 011210          412 KQFDPSRWDNHTT-----RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC--PAE----YLPVPRPS  480 (491)
Q Consensus       412 ~~F~PeRfl~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~----~~~~~~~~  480 (491)
                      ++|+||||++++.     ....++|||.|+|.|+|++||++|+++++|+++++|++++.++..  ...    +..+..+.
T Consensus       422 ~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (516)
T PLN02183        422 DTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRA  501 (516)
T ss_pred             cccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccC
Confidence            9999999997532     345799999999999999999999999999999999999876532  121    11232344


Q ss_pred             CCCeEEEecc
Q 011210          481 DQCLAKVVGF  490 (491)
Q Consensus       481 ~~~~~~~~~~  490 (491)
                      .++.+.+++|
T Consensus       502 ~~~~~~~~~r  511 (516)
T PLN02183        502 TRLVAVPTYR  511 (516)
T ss_pred             CCcEEEeecC
Confidence            4666666654


No 14 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.1e-72  Score=554.87  Aligned_cols=442  Identities=19%  Similarity=0.305  Sum_probs=347.1

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      ..++||||+++|++||+..+..  ...+++.++.+|+++||+  +|++++|+.++++++||+.+++++.++. .+..+..
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~--~~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~  108 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTN--SSADVEPLLRRLIARYGP--VVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA  108 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhcc--ccccHHHHHHHHHHHhCC--eEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc
Confidence            4478999999999999876542  123578899999999999  9999999999999999999999998765 4443322


Q ss_pred             cccccccccc-ceee--ccchhHHHHHH-hhhccCcChhhhHHHHHHHHHHHHHHHhhhhc---CCCCeehHHHHHHHHH
Q 011210          121 TSTNKLTFRG-SFIT--ASKEGQKRIRK-LATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS---LDTPIEFLTEMRKATF  193 (491)
Q Consensus       121 ~~~~~~~g~~-~l~~--~~g~~~~~~Rr-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~vdl~~~~~~~~~  193 (491)
                      .....++|.. +++.  .+|+.|+++|| ++.+ .|+.++++.+.+.+.++++.+++.|..   .++.+|+.+.+..++.
T Consensus       109 ~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~-~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~  187 (519)
T PLN00168        109 VASSRLLGESDNTITRSSYGPVWRLLRRNLVAE-TLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMF  187 (519)
T ss_pred             ccchhhhccCCCceeCCCCCHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence            2222334432 3333  67999999987 6777 999999999999999999999998843   2336899999999999


Q ss_pred             HHHHHHhcCCCCchhh-hhHHHHHHHHH---hcc---cCCCCCCCCC---cchHHHHHHHHHHHHHhHHHHHHHHHchhh
Q 011210          194 KIIANIFLGSSSDSVI-GSVEKHYIDYA---HGL---ISPFPINLPG---FSFHKAMKARDMLGEILQPVLNERRAMKSD  263 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~~-~~~~~~~~~~~---~~~---~~~~~~~~p~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  263 (491)
                      ++++.++||.+.++.. ..+...+..+.   ...   ..++|.+...   ..+.+..++.+.+.+++.++++++++....
T Consensus       188 ~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (519)
T PLN00168        188 CLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNH  267 (519)
T ss_pred             HHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999865422 12222222221   111   1122321111   113345567788888999999887664311


Q ss_pred             ----hc------cccccHHHHHHhhhh--hcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHH
Q 011210          264 ----EQ------KGRKGLIDLLMEVED--ENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQ  331 (491)
Q Consensus       264 ----~~------~~~~~~~~~ll~~~~--~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  331 (491)
                          +.      ....|+++.+++...  +++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       268 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei  347 (519)
T PLN00168        268 LGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI  347 (519)
T ss_pred             ccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence                10      013589999997653  223469999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCC
Q 011210          332 EDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPD  410 (491)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~  410 (491)
                      +++++.+  ... ++.+++++||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|||
T Consensus       348 ~~v~~~~--~~~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        348 KAKTGDD--QEE-VSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHhCCC--CCC-CCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            9998632  123 8999999999999999999999999986 58999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC---------CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Ccc--ccccCC
Q 011210          411 PKQFDPSRWDNHT---------TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PAE--YLPVPR  478 (491)
Q Consensus       411 p~~F~PeRfl~~~---------~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~--~~~~~~  478 (491)
                      |++|+||||++.+         .....++|||.|+|+|+|++||++|++++++.|+++|+|++.++.. +..  ...+..
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  504 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTV  504 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEe
Confidence            9999999999642         1235799999999999999999999999999999999999875432 221  223567


Q ss_pred             CCCCCeEEEeccC
Q 011210          479 PSDQCLAKVVGFK  491 (491)
Q Consensus       479 ~~~~~~~~~~~~~  491 (491)
                      +.++++|++++|+
T Consensus       505 ~~~~~~~~~~~R~  517 (519)
T PLN00168        505 MAKPLRARLVPRR  517 (519)
T ss_pred             ecCCcEEEEEecc
Confidence            8889999999885


No 15 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.2e-72  Score=552.47  Aligned_cols=431  Identities=22%  Similarity=0.308  Sum_probs=338.7

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      +.+.+|||+++|++||++.+..     +++..+.+++++||+  +|++++|++++++++||+.+++++.++. .+.++..
T Consensus        27 ~~~~~pgp~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~--i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~   99 (482)
T PTZ00404         27 HKNELKGPIPIPILGNLHQLGN-----LPHRDLTKMSKKYGG--IFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK   99 (482)
T ss_pred             cCCCCCCCCCCCeeccHhhhcc-----cHHHHHHHHHHHhCC--eeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            3466799999999999988763     789999999999999  9999999999999999999999998754 3432211


Q ss_pred             c--cccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHH
Q 011210          121 T--STNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKI  195 (491)
Q Consensus       121 ~--~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~  195 (491)
                      .  .....+| .+++..+|+.|+++|+++.+ .|+++++..+.+.+.+.+..+++.|.   +.++.+|+...+..+++++
T Consensus       100 ~~~~~~~~~~-~~l~~~~g~~w~~~Rk~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv  177 (482)
T PTZ00404        100 IPSIKHGTFY-HGIVTSSGEYWKRNREIVGK-AMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSA  177 (482)
T ss_pred             cceeeeeccC-CceeccChHHHHHHHHHHHH-HHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHH
Confidence            1  1112223 67778899999999999999 89999999999999999999999874   3444799999999999999


Q ss_pred             HHHHhcCCCCchhh-------hhHHHHHHHHHhcccC-----CCCCCCCCc--chHHHHHHHHHHHHHhHHHHHHHHHch
Q 011210          196 IANIFLGSSSDSVI-------GSVEKHYIDYAHGLIS-----PFPINLPGF--SFHKAMKARDMLGEILQPVLNERRAMK  261 (491)
Q Consensus       196 ~~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~p~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~  261 (491)
                      +++++||.+.+...       ..+.+.+..+......     +++...|..  ......+..+.+.+++.+.++++++..
T Consensus       178 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  257 (482)
T PTZ00404        178 MFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTI  257 (482)
T ss_pred             HHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            99999998754211       2233333333221111     111111110  011223455667777777776655432


Q ss_pred             hhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC
Q 011210          262 SDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST  341 (491)
Q Consensus       262 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  341 (491)
                      ...  ..+|+++.++++.++. .....+++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+..   
T Consensus       258 ~~~--~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~---  331 (482)
T PTZ00404        258 DPE--VPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR---  331 (482)
T ss_pred             CCC--CcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC---
Confidence            211  1568999999865321 1122345889999999999999999999999999999999999999999998742   


Q ss_pred             CCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeeccccee-CCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCC
Q 011210          342 QKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNI-QGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRW  419 (491)
Q Consensus       342 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf  419 (491)
                      .. ++.+++++||||+|||+|+||++|++|. ++|.+.+|+++ +|+.|||||.|.++.+++||||++||||++|+||||
T Consensus       332 ~~-~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRw  410 (482)
T PTZ00404        332 NK-VLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRF  410 (482)
T ss_pred             CC-CCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcccc
Confidence            22 7899999999999999999999999996 68999999999 999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCC-cc--ccccCCCCCCCeEEEecc
Q 011210          420 DNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECP-AE--YLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       420 l~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~  490 (491)
                      ++. .....++|||.|+|.|+|+++|++|++++++.|+++|+|++.++++. ..  ...+.. +.+++|.+++|
T Consensus       411 l~~-~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        411 LNP-DSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             CCC-CCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            875 34678999999999999999999999999999999999998755422 11  122344 57899999987


No 16 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.3e-72  Score=552.39  Aligned_cols=437  Identities=22%  Similarity=0.333  Sum_probs=345.1

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      +.+.||||+++|++||+.++..    .+++.++.+++++||+  +|++++|+.++++++||+++++++.+++ .+.....
T Consensus        26 ~~~~pPgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~--~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~   99 (499)
T PLN03234         26 SLRLPPGPKGLPIIGNLHQMEK----FNPQHFLFRLSKLYGP--IFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPL   99 (499)
T ss_pred             CCCCCcCCCCCCeeccHHhcCC----CCccHHHHHHHHHcCC--eEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCC
Confidence            3477899999999999988752    3678899999999999  9999999999999999999999998765 4443321


Q ss_pred             cccc---ccccccceeeccchhHHHHHHhh-hccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHH
Q 011210          121 TSTN---KLTFRGSFITASKEGQKRIRKLA-TSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATF  193 (491)
Q Consensus       121 ~~~~---~~~g~~~l~~~~g~~~~~~Rr~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~  193 (491)
                      ....   ...|....+...++.|+++||.+ .+ .|+++++..+.+.+.++++++++++.   +.++++|+.+.+..+++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~-~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~  178 (499)
T PLN03234        100 LKGQQTMSYQGRELGFGQYTAYYREMRKMCMVN-LFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTN  178 (499)
T ss_pred             chhhhhhccCCCccccCCCcHHHHHHHHHHHHH-hcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHH
Confidence            1111   11122222335678999999986 46 89999999999999999999999884   23448999999999999


Q ss_pred             HHHHHHhcCCCCchhhh---hHHHHHHHHHhcccC-----CCCCC--CCC--cchHHHHHHHHHHHHHhHHHHHHHHHch
Q 011210          194 KIIANIFLGSSSDSVIG---SVEKHYIDYAHGLIS-----PFPIN--LPG--FSFHKAMKARDMLGEILQPVLNERRAMK  261 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~--~p~--~~~~~~~~~~~~l~~~~~~~i~~~~~~~  261 (491)
                      +++++++||.+.+....   .+.+.+......+..     .+|++  ++.  ...++..++.+.+.+++.+.|+++.+..
T Consensus       179 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (499)
T PLN03234        179 CVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPN  258 (499)
T ss_pred             HHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999998654322   232322222211110     11211  110  1124567888899999999998876542


Q ss_pred             hhhccccccHHHHHHhhhhhcC--CCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC
Q 011210          262 SDEQKGRKGLIDLLMEVEDENG--TKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP  339 (491)
Q Consensus       262 ~~~~~~~~~~~~~ll~~~~~~~--~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  339 (491)
                      .... ..+|+++.+++..++++  ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+.  
T Consensus       259 ~~~~-~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~--  335 (499)
T PLN03234        259 RPKQ-ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD--  335 (499)
T ss_pred             ccCC-CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--
Confidence            2111 25689999987654332  358999999999999999999999999999999999999999999999999863  


Q ss_pred             CCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc-ceeecccceeCCeEeCCCCEEEEcccccccCCCCC-CCCCCCCCC
Q 011210          340 STQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS-FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENY-PDPKQFDPS  417 (491)
Q Consensus       340 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~Pe  417 (491)
                       ++. ++.+++++|||++|||+|++|++|+++.. +|.+.+|++++|+.|||||.|.++.+.+||||++| +||++|+||
T Consensus       336 -~~~-~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~Pe  413 (499)
T PLN03234        336 -KGY-VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPE  413 (499)
T ss_pred             -CCC-CCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCch
Confidence             233 89999999999999999999999999974 79999999999999999999999999999999999 899999999


Q ss_pred             CCCCCCC------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC--CCccc----cccCCCCCCCeE
Q 011210          418 RWDNHTT------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE--CPAEY----LPVPRPSDQCLA  485 (491)
Q Consensus       418 Rfl~~~~------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~--~~~~~----~~~~~~~~~~~~  485 (491)
                      ||+++..      ....++|||.|+|.|+|+++|++|+++++|.|+++|+|++.++.  .....    .-+..|++.+++
T Consensus       414 R~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (499)
T PLN03234        414 RFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVL  493 (499)
T ss_pred             hhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEE
Confidence            9997532      35579999999999999999999999999999999999987642  22221    224568888888


Q ss_pred             EEecc
Q 011210          486 KVVGF  490 (491)
Q Consensus       486 ~~~~~  490 (491)
                      .+++|
T Consensus       494 ~~~~~  498 (499)
T PLN03234        494 APTKH  498 (499)
T ss_pred             EeecC
Confidence            88765


No 17 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.1e-71  Score=548.18  Aligned_cols=463  Identities=20%  Similarity=0.343  Sum_probs=359.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcchhhhccccCCCcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceE
Q 011210            8 LILALAIFIGTYAFVFGVLRRVNEWYHCGKLGEMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIY   87 (491)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~   87 (491)
                      |++-+++..++..+..++.++..        .....++||||+++|++|+++.+.     .+++.++.+++++||+  ||
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~pPgp~~~Pl~G~l~~~~-----~~~~~~~~~~~~~yG~--i~   67 (504)
T PLN00110          3 LLLELAAATLLFFITRFFIRSLL--------PKPSRKLPPGPRGWPLLGALPLLG-----NMPHVALAKMAKRYGP--VM   67 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh--------hcccCCCcccCCCCCeeechhhcC-----CchHHHHHHHHHHhCC--eE
Confidence            34445555555545444444431        333457899999999999987664     3588999999999999  99


Q ss_pred             EeeeCCCcEEEEeChHhHhHHhcCCc-ccccccccc--cccccc-ccceeeccchhHHHHHHhhhccCcChhhhHHHHHH
Q 011210           88 RNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPTS--TNKLTF-RGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDN  163 (491)
Q Consensus        88 ~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~~--~~~~~g-~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~  163 (491)
                      ++++|++++|+++||+.+++++.++. .+..+....  .....| ..+++..+|+.|+++|+.+.+..|++++++.+.+.
T Consensus        68 ~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~  147 (504)
T PLN00110         68 FLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQV  147 (504)
T ss_pred             EEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHH
Confidence            99999999999999999999998764 444332211  111233 34566678999999999998658999999999999


Q ss_pred             HHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHHHHHHhcCCCC-c---hhhhhHHHHHHHHHhcc--c---CCCCC--
Q 011210          164 IEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKIIANIFLGSSS-D---SVIGSVEKHYIDYAHGL--I---SPFPI--  229 (491)
Q Consensus       164 ~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~~~~~~fG~~~-~---~~~~~~~~~~~~~~~~~--~---~~~~~--  229 (491)
                      +.+++..+++.+.   .+++++|+.+.+..++.+++++++||.+. .   .....+.+.+.......  .   ..+|.  
T Consensus       148 i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~  227 (504)
T PLN00110        148 RTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIA  227 (504)
T ss_pred             HHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHh
Confidence            9888888887763   34558999999999999999999999874 1   11233444443332211  1   11221  


Q ss_pred             CCCCc-chHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhh-cCCCCCHHHHHHHHHHHHhcccccHH
Q 011210          230 NLPGF-SFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDE-NGTKLDDLDIIDMLISFLSAGHESSA  307 (491)
Q Consensus       230 ~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~  307 (491)
                      +++.. ..++..+..+.+.+++.+.++++++..... ..+.|+++.+++..+. ++..++++++.+++..+++||+|||+
T Consensus       228 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta  306 (504)
T PLN00110        228 WMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER-KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSS  306 (504)
T ss_pred             hhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchH
Confidence            11211 113344556777788888887776543211 1146899999976432 34569999999999999999999999


Q ss_pred             HHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCe
Q 011210          308 HIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGY  386 (491)
Q Consensus       308 ~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~  386 (491)
                      ++++|++++|++||++|+|+++|++++++.   +.. ++.+++++||||+|||+|++|++|+++. ++|.+.+|++++||
T Consensus       307 ~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~---~~~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~  382 (504)
T PLN00110        307 SVIEWSLAEMLKNPSILKRAHEEMDQVIGR---NRR-LVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGY  382 (504)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---CCC-CCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCE
Confidence            999999999999999999999999999863   223 8999999999999999999999999986 78999999999999


Q ss_pred             EeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC-------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011210          387 FIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT-------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLN  459 (491)
Q Consensus       387 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~-------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  459 (491)
                      .|||||.|+++.+++|+||++|+||++|+||||++.+.       ....++|||.|+|.|+|++||++|+++++|.|+++
T Consensus       383 ~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~  462 (504)
T PLN00110        383 YIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHS  462 (504)
T ss_pred             EECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999996431       12479999999999999999999999999999999


Q ss_pred             CeEeccCCCCC-c--cccccCCCCCCCeEEEecc
Q 011210          460 YKLELQNPECP-A--EYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       460 f~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~  490 (491)
                      |+|++.++... .  ....+..|+.++++++++|
T Consensus       463 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        463 FDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             ceeecCCCCccCcccccccccccCCCceEeeccC
Confidence            99998765321 1  2234678999999999987


No 18 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2e-70  Score=543.61  Aligned_cols=439  Identities=21%  Similarity=0.328  Sum_probs=347.2

Q ss_pred             CCcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccc
Q 011210           40 EMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMG  118 (491)
Q Consensus        40 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~  118 (491)
                      +...+.||||+++|++||++++.     .+++.++.+++++||+  +|++++++.++++++||+.+++++.++. .+.+ 
T Consensus        28 ~~~~~~ppgp~~~pl~G~~~~~~-----~~~~~~~~~~~~kyG~--v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~-   99 (514)
T PLN03112         28 RKSLRLPPGPPRWPIVGNLLQLG-----PLPHRDLASLCKKYGP--LVYLRLGSVDAITTDDPELIREILLRQDDVFAS-   99 (514)
T ss_pred             cCCCCCccCCCCCCeeeeHHhcC-----CchHHHHHHHHHHhCC--eEEEEecCccEEEECCHHHHHHHHHhCCccccc-
Confidence            34557899999999999998875     3688999999999999  9999999999999999999999997654 4443 


Q ss_pred             ccccc---ccccccc-ceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHH
Q 011210          119 YPTST---NKLTFRG-SFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKA  191 (491)
Q Consensus       119 ~~~~~---~~~~g~~-~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~  191 (491)
                      .+...   ...+|.. .++..+|+.|+++||.+....|+.++++.+.+.+.++++.+++.+.   ..++++|+.+.+..+
T Consensus       100 ~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~  179 (514)
T PLN03112        100 RPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAF  179 (514)
T ss_pred             CCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHH
Confidence            22221   1223322 3455689999999999654389999999999999999999988752   234479999999999


Q ss_pred             HHHHHHHHhcCCCCch-------hhhhHHHHHHHHHhcc--c---CCCCC--CC-CCcchHHHHHHHHHHHHHhHHHHHH
Q 011210          192 TFKIIANIFLGSSSDS-------VIGSVEKHYIDYAHGL--I---SPFPI--NL-PGFSFHKAMKARDMLGEILQPVLNE  256 (491)
Q Consensus       192 ~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~--~---~~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~  256 (491)
                      +++++++++||.+...       ....+.+.+..+....  .   .++|.  ++ +....++..++.+.+.+++++.+++
T Consensus       180 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  259 (514)
T PLN03112        180 SMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDE  259 (514)
T ss_pred             HHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987521       1122333333332211  1   11222  11 2112345566778888888988887


Q ss_pred             HHHchhhhc--cccccHHHHHHhhhhhcCC-CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 011210          257 RRAMKSDEQ--KGRKGLIDLLMEVEDENGT-KLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQED  333 (491)
Q Consensus       257 ~~~~~~~~~--~~~~~~~~~ll~~~~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  333 (491)
                      +++......  ..+.|+++.++++.++++. .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~  339 (514)
T PLN03112        260 HRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDS  339 (514)
T ss_pred             HHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            776432211  1246899999987544432 4899999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCC
Q 011210          334 IIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPK  412 (491)
Q Consensus       334 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  412 (491)
                      +.+..   +. ++.+++++||||+|||+|++|++|+++. ++|.+.+|++++|+.|||||.|.++.+++||||++|+||+
T Consensus       340 ~~~~~---~~-~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~  415 (514)
T PLN03112        340 VVGRN---RM-VQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVE  415 (514)
T ss_pred             hcCCC---Cc-CChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChh
Confidence            98642   23 8999999999999999999999999996 6899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC--------CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC--CCccc----cccCC
Q 011210          413 QFDPSRWDNHT--------TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE--CPAEY----LPVPR  478 (491)
Q Consensus       413 ~F~PeRfl~~~--------~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~--~~~~~----~~~~~  478 (491)
                      +|+||||....        .....++|||.|+|.|+|++||++|++++++.|+++|+|++.+..  ..+..    .....
T Consensus       416 ~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  495 (514)
T PLN03112        416 EFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMP  495 (514)
T ss_pred             hcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccc
Confidence            99999976532        123579999999999999999999999999999999999986432  12222    23456


Q ss_pred             CCCCCeEEEecc
Q 011210          479 PSDQCLAKVVGF  490 (491)
Q Consensus       479 ~~~~~~~~~~~~  490 (491)
                      +.+++.+++++|
T Consensus       496 ~~~~~~~~~~~r  507 (514)
T PLN03112        496 KAKPLRAVATPR  507 (514)
T ss_pred             cCCCeEEEeecC
Confidence            788999999987


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2.6e-70  Score=540.27  Aligned_cols=416  Identities=25%  Similarity=0.389  Sum_probs=328.3

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      ..++||||+++|++||++.+..    .+++.++.+|+++||+  +|++++++.++++++||+.+++++.+++ .+.+..+
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~----~~~~~~~~~~~~~yG~--v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~  100 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQK----LNPQRFFAGWAKKYGP--ILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPP  100 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCC----CChhHHHHHHHHHhCC--eEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCC
Confidence            4478999999999999988752    4689999999999999  9999999999999999999999998765 4443322


Q ss_pred             cccccc--ccccce-eeccchhHHHHHHh-hhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHH
Q 011210          121 TSTNKL--TFRGSF-ITASKEGQKRIRKL-ATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATF  193 (491)
Q Consensus       121 ~~~~~~--~g~~~l-~~~~g~~~~~~Rr~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~  193 (491)
                      ......  .|...+ +..+|+.|+++|+. +.+ .|+..++..+.+.+.+.++++++.|.   ..++++|+.+.+..+++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~  179 (502)
T PLN02966        101 HRGHEFISYGRRDMALNHYTPYYREIRKMGMNH-LFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTN  179 (502)
T ss_pred             CccceeeccCcceeeeCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Confidence            211111  232223 34579999999999 666 99999999999999999999999884   33447999999999999


Q ss_pred             HHHHHHhcCCCCchhhhh---HHHHHHHHHhccc-----CCCCCC--CC-Ccch-HHHHHHHHHHHHHhHHHHHHHHHch
Q 011210          194 KIIANIFLGSSSDSVIGS---VEKHYIDYAHGLI-----SPFPIN--LP-GFSF-HKAMKARDMLGEILQPVLNERRAMK  261 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~--~p-~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~  261 (491)
                      ++++.++||.+.+....+   +.+.+......+.     ..+|..  ++ ...+ .......+.+.+++.+.++++....
T Consensus       180 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (502)
T PLN02966        180 SVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK  259 (502)
T ss_pred             HHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999986543222   2222222221111     112211  11 1111 1123345556666777666654321


Q ss_pred             hhhccccccHHHHHHhhhhhc--CCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC
Q 011210          262 SDEQKGRKGLIDLLMEVEDEN--GTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP  339 (491)
Q Consensus       262 ~~~~~~~~~~~~~ll~~~~~~--~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  339 (491)
                      .... ...|+++.+++..+++  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++..+
T Consensus       260 ~~~~-~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~  338 (502)
T PLN02966        260 RVKP-ETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKG  338 (502)
T ss_pred             cccc-ccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccC
Confidence            1111 1468999999876543  345899999999999999999999999999999999999999999999999986421


Q ss_pred             CCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCC-CCCCCCCCC
Q 011210          340 STQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENY-PDPKQFDPS  417 (491)
Q Consensus       340 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~Pe  417 (491)
                       +.. ++.+++++||||+|||+|+||++|++++ ++|.+.+|++++||.|||||.|.++++++||||++| |||++|+||
T Consensus       339 -~~~-~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  416 (502)
T PLN02966        339 -STF-VTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPE  416 (502)
T ss_pred             -CCc-CCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChh
Confidence             223 7999999999999999999999999997 689999999999999999999999999999999999 999999999


Q ss_pred             CCCCCC----CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCC
Q 011210          418 RWDNHT----TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNP  467 (491)
Q Consensus       418 Rfl~~~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  467 (491)
                      ||++.+    .....++|||.|+|.|+|++||++|+++++|.|+++|+|++.++
T Consensus       417 Rwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~  470 (502)
T PLN02966        417 RFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNG  470 (502)
T ss_pred             hhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCC
Confidence            999753    23568999999999999999999999999999999999998765


No 20 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.2e-70  Score=538.69  Aligned_cols=436  Identities=19%  Similarity=0.294  Sum_probs=332.2

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccccc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPT  121 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~  121 (491)
                      .+.||||+++|++|+++.+..    +..+..+.+|+++||+  ||++++|++++|+++||+.+++++.+++ .+.+....
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~----~~~~~~~~~~~~~yG~--v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGD----DLNHRNLAEMAKKYGD--VFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCC----CchhHHHHHHHHHhCC--eEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            477899999999999887653    3357899999999999  9999999999999999999999998754 44432211


Q ss_pred             -ccccccc--ccceeeccchhHHHHHHhhh-ccCcChhhhHHHHHHHHHHHHHHHhhhhc----CCCCeehHHHHHHHHH
Q 011210          122 -STNKLTF--RGSFITASKEGQKRIRKLAT-SPLKGHKAIVVYIDNIEEIVIKSLKGWAS----LDTPIEFLTEMRKATF  193 (491)
Q Consensus       122 -~~~~~~g--~~~l~~~~g~~~~~~Rr~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~  193 (491)
                       ....+.|  ...++..+|+.|+++||.+. + .|+++++..+.+.+.++++++++++..    .++.+|+.+.+..+++
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~-~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~  181 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVP-FFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMY  181 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHH-hcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHH
Confidence             1222223  23466678999999999997 6 899999999999999999999998742    2336999999999999


Q ss_pred             HHHHHHhcCCCCchhhhhHHHHH----HHHH---hcc----cCCCCCCCCCc-chH-HHHHHHHHHHH-HhHHHHHHHHH
Q 011210          194 KIIANIFLGSSSDSVIGSVEKHY----IDYA---HGL----ISPFPINLPGF-SFH-KAMKARDMLGE-ILQPVLNERRA  259 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~~~~~~~~~----~~~~---~~~----~~~~~~~~p~~-~~~-~~~~~~~~l~~-~~~~~i~~~~~  259 (491)
                      +++++++||.+++.........+    ....   ..+    ..++|...+.. .+. ...+....... +.+..++.+++
T Consensus       182 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        182 NIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998654222111111    1111   111    01112111110 111 11111111122 33345555544


Q ss_pred             chhh---hccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHh
Q 011210          260 MKSD---EQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIK  336 (491)
Q Consensus       260 ~~~~---~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  336 (491)
                      ....   ......|+++.++++.+++  .++++++..++..+++||+|||+++++|++++|++||++|+||++|++++++
T Consensus       262 ~~~~~~~~~~~~~d~l~~ll~~~~~~--~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~  339 (503)
T PLN02394        262 LMSAKGMDKEGLKCAIDHILEAQKKG--EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLG  339 (503)
T ss_pred             HhhhccCCcchhhhHHHHHHhccccC--CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC
Confidence            2211   1112468999999875432  4899999999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc-ceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCC
Q 011210          337 KRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS-FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFD  415 (491)
Q Consensus       337 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  415 (491)
                      .   +.. ++.+++++||||+|||+|+||++|++|.. +|.+.+|++++||.||+||.|.+++|++||||++|+||++|+
T Consensus       340 ~---~~~-~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~  415 (503)
T PLN02394        340 P---GNQ-VTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFR  415 (503)
T ss_pred             C---CCC-CCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccC
Confidence            3   223 88999999999999999999999999974 799999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcc----cc-ccCCCCCCCe
Q 011210          416 PSRWDNHTT------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAE----YL-PVPRPSDQCL  484 (491)
Q Consensus       416 PeRfl~~~~------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~----~~-~~~~~~~~~~  484 (491)
                      ||||++.+.      ....++|||.|+|+|+|+.+|++|+++++|.++++|++++.++.+...    ++ .....+.++.
T Consensus       416 PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        416 PERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             ccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCce
Confidence            999996431      245799999999999999999999999999999999999876542121    22 1343666999


Q ss_pred             EEEeccC
Q 011210          485 AKVVGFK  491 (491)
Q Consensus       485 ~~~~~~~  491 (491)
                      |++++|.
T Consensus       496 ~~~~~r~  502 (503)
T PLN02394        496 VVFKPRS  502 (503)
T ss_pred             EEeecCC
Confidence            9999984


No 21 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.1e-70  Score=485.58  Aligned_cols=433  Identities=27%  Similarity=0.444  Sum_probs=370.9

Q ss_pred             CCCCCCCCC-ccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc---cccccc
Q 011210           44 SLPPGDMGW-PLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE---NFKMGY  119 (491)
Q Consensus        44 ~~pPgp~~~-P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~---~~~~~~  119 (491)
                      ..||.-.|| |++|++..+.     ++|..++++..+|||+  ||++.++|+.+.++.+|+....++++..   ++...+
T Consensus        31 ~~PPli~gwiP~lG~a~~fg-----k~P~eFl~~~~~K~Gd--VFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~  103 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFG-----KDPLEFLRECRKKYGD--VFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAY  103 (486)
T ss_pred             CCCcccccCcchhhHHHHhc-----cCHHHHHHHHHHhcCC--eEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHH
Confidence            578888887 9999999998     4999999999999999  9999999999999999999999999873   333333


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhh-hhcCCCCeehHHHHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKG-WASLDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~vdl~~~~~~~~~~~~~~  198 (491)
                      ...+.+.+|.+-....++....++.+++.. .+...+++++.+.|.+++.+.+.. +...+....+......+.+.+.-.
T Consensus       104 ~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~-~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~  182 (486)
T KOG0684|consen  104 SKLTTPVFGKGVVYDVPNHVMMEQKKFFKS-ALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRL  182 (486)
T ss_pred             HHhhhhhcCCCccccCCCchHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHH
Confidence            345556677555555677888888889988 889999999999999999999998 766664556777788888888777


Q ss_pred             HhcCCCCchhhhhHHHHHHHHHhcccC---CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHH
Q 011210          199 IFLGSSSDSVIGSVEKHYIDYAHGLIS---PFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLL  275 (491)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l  275 (491)
                      ++||+..+....+....+.++..++..   .+|.++|...+++..++++++.+.+...+.++++..+..   +.|+++.+
T Consensus       183 ll~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~---~~dmlq~l  259 (486)
T KOG0684|consen  183 LLGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISKW---DNDMLQSL  259 (486)
T ss_pred             hhhhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccc---cHHHHHHH
Confidence            888877555455555566666655433   366688888888888999999999999999998875432   56899999


Q ss_pred             HhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHH
Q 011210          276 MEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEY  355 (491)
Q Consensus       276 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~  355 (491)
                      ++ ...+|...+++|+...++.+++||+.||+.|.+|++++|++|||+++.+++|+++++|.+.  .. ++.+++++||.
T Consensus       260 ~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~--~~-l~~d~L~~lpl  335 (486)
T KOG0684|consen  260 ME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK--EK-LTYDQLKDLPL  335 (486)
T ss_pred             HH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC--CC-CCHHHHhcchH
Confidence            98 5567778999999999999999999999999999999999999999999999999997532  23 99999999999


Q ss_pred             HHHHHHHhcccCCCCCCcceeecccceeCC----eEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCC------
Q 011210          356 LAKVIAETLRMTNLSPSSFREAEADVNIQG----YFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTR------  425 (491)
Q Consensus       356 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~------  425 (491)
                      |++||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.+++..+|+||++||||++|+||||++++.+      
T Consensus       336 L~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~  415 (486)
T KOG0684|consen  336 LDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGE  415 (486)
T ss_pred             HHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccc
Confidence            999999999999998899999999999976    9999999999999999999999999999999999975521      


Q ss_pred             --CCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCC-CCCccccc-cCCCCCCCeEEEeccC
Q 011210          426 --PGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNP-ECPAEYLP-VPRPSDQCLAKVVGFK  491 (491)
Q Consensus       426 --~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~  491 (491)
                        ...++|||+|+|.|||+.||.+|+|+++..++++||+++.++ -++..+.. +..|.++|+++.++|.
T Consensus       416 kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  416 KLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             cccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence              235699999999999999999999999999999999999984 45566655 7999999999999884


No 22 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.4e-68  Score=526.87  Aligned_cols=444  Identities=20%  Similarity=0.295  Sum_probs=332.9

Q ss_pred             ccCCCcCCCCCCCCCCccccccHHHHhhhhcCCch-HHHHHHHHHc-CCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-
Q 011210           37 KLGEMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQ-SFIYNLFERY-GRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-  113 (491)
Q Consensus        37 ~~~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~-~~~~~~~~~y-G~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-  113 (491)
                      ..+....++||||+++|++||++++..    +.++ .++.++.++| |+  ||++++|+.++|+|+||+.+++++.+++ 
T Consensus        33 ~~~~~~~~~PPgp~~~P~iGnl~~l~~----~~~~~~~~~~~~~~~~g~--i~~~~lg~~~~vvvsdpe~ikevl~~~~~  106 (534)
T PLN03018         33 KTKDRSRQLPPGPPGWPILGNLPELIM----TRPRSKYFHLAMKELKTD--IACFNFAGTHTITINSDEIAREAFRERDA  106 (534)
T ss_pred             ccCCCCCCCCcCCCCCCeeccHHHhcc----CCCcchhHHHHHHHhCCC--eEEEEeCCccEEEECCHHHHHHHHHhCcH
Confidence            334445568999999999999988753    2222 4566666666 78  9999999999999999999999998765 


Q ss_pred             cccccccccccccccc--cceeec-cchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc---CCCCeehHHH
Q 011210          114 NFKMGYPTSTNKLTFR--GSFITA-SKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS---LDTPIEFLTE  187 (491)
Q Consensus       114 ~~~~~~~~~~~~~~g~--~~l~~~-~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~vdl~~~  187 (491)
                      .+.++........++.  .++++. +|+.|+++||++++.+++......+.+.+.++++++++.+..   .+.++|+.+.
T Consensus       107 ~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~  186 (534)
T PLN03018        107 DLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVREL  186 (534)
T ss_pred             hhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHH
Confidence            4554332222222332  245555 599999999999983445544455555555667777777642   3347999999


Q ss_pred             HHHHHHHHHHHHhcCCCCchh------hhh----HHHHHHHHHhccc---C-----CCCCCCCC----cchHHHHHHHHH
Q 011210          188 MRKATFKIIANIFLGSSSDSV------IGS----VEKHYIDYAHGLI---S-----PFPINLPG----FSFHKAMKARDM  245 (491)
Q Consensus       188 ~~~~~~~~~~~~~fG~~~~~~------~~~----~~~~~~~~~~~~~---~-----~~~~~~p~----~~~~~~~~~~~~  245 (491)
                      +..++++++++++||.+....      ...    +...+........   .     .++.++..    ....+.......
T Consensus       187 ~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  266 (534)
T PLN03018        187 SRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNL  266 (534)
T ss_pred             HHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHH
Confidence            999999999999999975321      011    1111111111110   0     01111110    011233445566


Q ss_pred             HHHHhHHHHHHHHHchhhh-c-cccccHHHHHHhhhhhcCC-CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCch
Q 011210          246 LGEILQPVLNERRAMKSDE-Q-KGRKGLIDLLMEVEDENGT-KLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQ  322 (491)
Q Consensus       246 l~~~~~~~i~~~~~~~~~~-~-~~~~~~~~~ll~~~~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  322 (491)
                      +.+++++.++++++..... . ....|+++.+++..++++. .++++++.+++..+++||+|||+.+++|++++|+.||+
T Consensus       267 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~  346 (534)
T PLN03018        267 VRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPE  346 (534)
T ss_pred             HHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH
Confidence            7888888888876543211 1 1146899999987655443 48999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc-ceeecccceeCCeEeCCCCEEEEccccc
Q 011210          323 TLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS-FREAEADVNIQGYFIPKGWKVLVYNRGV  401 (491)
Q Consensus       323 ~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~  401 (491)
                      +|+|+++|++++++.+   +. ++.+++.+||||+|||+|++|++|++|.. +|.+.+|++++||.||||+.|+++.+++
T Consensus       347 ~q~kl~~Ei~~v~~~~---~~-~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~  422 (534)
T PLN03018        347 ILRKALKELDEVVGKD---RL-VQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGL  422 (534)
T ss_pred             HHHHHHHHHHHHhCCC---CC-CCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHh
Confidence            9999999999998632   23 89999999999999999999999999975 6999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCC---------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcc
Q 011210          402 HYNPENYPDPKQFDPSRWDNHTT---------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAE  472 (491)
Q Consensus       402 ~~d~~~~~~p~~F~PeRfl~~~~---------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~  472 (491)
                      |+||++|+||++|+||||++.+.         .+..++|||.|+|.|+|+++|++|+++++++|+++|+|++.++..+..
T Consensus       423 ~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  502 (534)
T PLN03018        423 GRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLS  502 (534)
T ss_pred             cCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCC
Confidence            99999999999999999996431         346799999999999999999999999999999999999875532221


Q ss_pred             c---cccCCCCCCCeEEEecc
Q 011210          473 Y---LPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       473 ~---~~~~~~~~~~~~~~~~~  490 (491)
                      .   ..+...+.+++|++++|
T Consensus       503 ~~~~~~~~~~p~~~~v~~~~R  523 (534)
T PLN03018        503 LEEDDASLLMAKPLLLSVEPR  523 (534)
T ss_pred             ccccccceecCCCeEEEEEec
Confidence            1   12334557999999987


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.4e-69  Score=537.43  Aligned_cols=435  Identities=18%  Similarity=0.267  Sum_probs=335.2

Q ss_pred             CCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHc---CCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc--
Q 011210           46 PPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERY---GRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY--  119 (491)
Q Consensus        46 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~y---G~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~--  119 (491)
                      +|||+++|++||++.+..     + +..+.+|.++|   |+  +|++++++.++++++||+.+++++.++. .+....  
T Consensus        32 ~pgp~~~p~~G~~~~~~~-----~-~~~~~~~~~~~~~~~~--~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~  103 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-----N-YDRMHDWLVEYLSKDR--TVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVY  103 (516)
T ss_pred             cCCCCCCCeecchHHHHh-----c-cchHHHHHHHHhccCC--cEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhH
Confidence            489999999999877653     2 34566777777   77  9999999999999999999999998653 333221  


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHH-HHHHHHHHhhhh---cCCCCeehHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNI-EEIVIKSLKGWA---SLDTPIEFLTEMRKATFKI  195 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~  195 (491)
                      ......+.| .+++..+|+.|+++||++++ .|+.++++.+.+.+ .+.++.+.+.+.   ..+.++|+.+++..+++++
T Consensus       104 ~~~~~~~~g-~~l~~~~g~~w~~~Rr~l~~-~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv  181 (516)
T PLN03195        104 HSYMEVLLG-DGIFNVDGELWRKQRKTASF-EFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDS  181 (516)
T ss_pred             HHHHHHHhc-CeeeccCcHHHHHHHHhcch-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHH
Confidence            111222345 56777899999999999999 89999999999876 555555555442   2344799999999999999


Q ss_pred             HHHHhcCCCCchhh-----hhHHHHHHHHHhcc-c-CCCCCC-----CCCcchHHHHHHHHHHHHHhHHHHHHHHHchhh
Q 011210          196 IANIFLGSSSDSVI-----GSVEKHYIDYAHGL-I-SPFPIN-----LPGFSFHKAMKARDMLGEILQPVLNERRAMKSD  263 (491)
Q Consensus       196 ~~~~~fG~~~~~~~-----~~~~~~~~~~~~~~-~-~~~~~~-----~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  263 (491)
                      +++++||.+.+...     ..+.+.+....... . ...|.+     ++....++..+....+.+++.+.+++++++...
T Consensus       182 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  261 (516)
T PLN03195        182 ICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDE  261 (516)
T ss_pred             HHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999764321     12333333222111 0 001111     111112233456777888888888877654321


Q ss_pred             h----ccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC
Q 011210          264 E----QKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP  339 (491)
Q Consensus       264 ~----~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  339 (491)
                      .    ....+|+++.++++.++++..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+...
T Consensus       262 ~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        262 ARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             cccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence            1    112468999999865444446999999999999999999999999999999999999999999999999875320


Q ss_pred             -----------------CCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee-CCeEeCCCCEEEEccccc
Q 011210          340 -----------------STQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI-QGYFIPKGWKVLVYNRGV  401 (491)
Q Consensus       340 -----------------~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~  401 (491)
                                       .++. ++.+++++||||+|||+|+||++|++|..+|.+.+|.++ +|+.|||||.|+++.+++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~  420 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGL-LTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSM  420 (516)
T ss_pred             ccccccccchhhhhcccccCC-CCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhh
Confidence                             0123 899999999999999999999999999888888887666 999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCCCCCCC----CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Cccccc
Q 011210          402 HYNPENY-PDPKQFDPSRWDNHT----TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PAEYLP  475 (491)
Q Consensus       402 ~~d~~~~-~~p~~F~PeRfl~~~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~  475 (491)
                      ||||++| +||++|+||||++.+    ..+..++|||.|+|.|+|++||++|++++++.++++|++++.++.. ......
T Consensus       421 h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  500 (516)
T PLN03195        421 GRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMT  500 (516)
T ss_pred             ccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeee
Confidence            9999999 999999999999642    2345799999999999999999999999999999999999864432 222223


Q ss_pred             cCCCCCCCeEEEeccC
Q 011210          476 VPRPSDQCLAKVVGFK  491 (491)
Q Consensus       476 ~~~~~~~~~~~~~~~~  491 (491)
                      +..|.++++|++++|.
T Consensus       501 ~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        501 ILSMANGLKVTVSRRS  516 (516)
T ss_pred             EEecCCCEEEEEEeCC
Confidence            5789999999999874


No 24 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.8e-69  Score=529.02  Aligned_cols=428  Identities=16%  Similarity=0.211  Sum_probs=330.0

Q ss_pred             CCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEE---eeeCCCcEEEEeChHhHhHHhcCCc-cccccc-cc
Q 011210           47 PGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYR---NHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY-PT  121 (491)
Q Consensus        47 Pgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~---~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~-~~  121 (491)
                      |||++||++||+..+...  ....++++.+...+||.  .++   .++|+.++++|+||+.+++||.++. .+.+.. ..
T Consensus        34 p~p~~~pl~G~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         34 PILKNWPFLGMLPGMLHQ--IPRIYDWTVEVLEASNL--TFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             CCCCCCCcccchHHHHHc--cCcHHHHHHHHHHhCCC--cEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            889999999999887642  22345556666666886  555   5778899999999999999998753 333332 11


Q ss_pred             cccccccccceeeccchhHHHHHHhhhccCcChhhhHHH--HHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHHH
Q 011210          122 STNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVY--IDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKII  196 (491)
Q Consensus       122 ~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~~  196 (491)
                      ....+.| .+++.++|+.|+++||++++ .|+..++..+  .+.+.+.++.+++.+.   ..+.++|+.+.+..++++++
T Consensus       110 ~~~~~~g-~gl~~~~g~~Wr~~Rk~l~p-~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        110 KIFDVLG-EGILTVDFELWEDLRKSNHA-LFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             HHHHhhc-CcccccCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            2234446 68888899999999999998 9988877542  3555566666665553   34457999999999999999


Q ss_pred             HHHhcCCCCchhh-----hhHHHHHHHHHhcc--cCCCCC-------CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchh
Q 011210          197 ANIFLGSSSDSVI-----GSVEKHYIDYAHGL--ISPFPI-------NLPGFSFHKAMKARDMLGEILQPVLNERRAMKS  262 (491)
Q Consensus       197 ~~~~fG~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~-------~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (491)
                      ++++||.+.+...     ..+.+.+.......  ....|+       +++....++..++.+.+.+++.+.|+++++...
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  267 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEI  267 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998754321     22333322221110  011221       122223455678888999999999988876421


Q ss_pred             hh---ccccccHHHHHHhhhhhc---CCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHh
Q 011210          263 DE---QKGRKGLIDLLMEVEDEN---GTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIK  336 (491)
Q Consensus       263 ~~---~~~~~~~~~~ll~~~~~~---~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~  336 (491)
                      +.   +...+|+++.+++..+++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++  
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v--  345 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK--  345 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh--
Confidence            11   111368999999864321   2247889999999999999999999999999999999999999999999876  


Q ss_pred             cCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee-CCeEeCCCCEEEEcccccccCCCCC-CCCCCC
Q 011210          337 KRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI-QGYFIPKGWKVLVYNRGVHYNPENY-PDPKQF  414 (491)
Q Consensus       337 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F  414 (491)
                              ++.+++++||||+|||+||||++|++|...|.+.+|.++ +|+.|||||.|++++|++||||++| +||++|
T Consensus       346 --------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F  417 (500)
T PLN02169        346 --------FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDF  417 (500)
T ss_pred             --------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhc
Confidence                    578999999999999999999999999988888777665 9999999999999999999999999 899999


Q ss_pred             CCCCCCCCCC-----CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEe
Q 011210          415 DPSRWDNHTT-----RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVV  488 (491)
Q Consensus       415 ~PeRfl~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  488 (491)
                      +||||++.+.     .+..|+|||+|+|.|+|+.||++|+++++++|+++|+|++.++. .......+.+|.+|++|+++
T Consensus       418 ~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~  497 (500)
T PLN02169        418 KPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVT  497 (500)
T ss_pred             CccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEE
Confidence            9999996431     25689999999999999999999999999999999999987542 22222346889999999999


Q ss_pred             cc
Q 011210          489 GF  490 (491)
Q Consensus       489 ~~  490 (491)
                      +|
T Consensus       498 ~~  499 (500)
T PLN02169        498 KK  499 (500)
T ss_pred             eC
Confidence            87


No 25 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-69  Score=495.41  Aligned_cols=438  Identities=21%  Similarity=0.348  Sum_probs=363.3

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEee-eCCCcEEEEeChHhHhHHhcCCcccccc--
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNH-IFGSPCVIVVAPEACKQVFLDDENFKMG--  118 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~-~~~~~~vvv~~~~~~~~i~~~~~~~~~~--  118 (491)
                      +....|||+++|++|.++.+. .....+.|+.+..++++||+  ||+.. +|+...|++.+|++++.+|++++...-+  
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~-~~~~~~lh~~~~~~~~~YG~--I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~  124 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWR-AGGATKLHQHIVQLHQKYGP--IFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPL  124 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHH-hhhhhHHHHHHHHHHHHcCc--eeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccc
Confidence            344569999999999988633 33346889999999999999  99999 7888999999999999999998732221  


Q ss_pred             -cc-c-cccccc-cccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---c---CCCCeehHHHH
Q 011210          119 -YP-T-STNKLT-FRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---S---LDTPIEFLTEM  188 (491)
Q Consensus       119 -~~-~-~~~~~~-g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~---~~~~vdl~~~~  188 (491)
                       +. . .-.+.. +..+++..+|++|++.|..+++.++++++++.|.+.+.+.+++++..+.   +   +..+.|+.+.+
T Consensus       125 ~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l  204 (519)
T KOG0159|consen  125 LIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQEL  204 (519)
T ss_pred             ccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence             11 0 112233 4568899999999999999999899999999999999999999988762   2   33478999999


Q ss_pred             HHHHHHHHHHHhcCCCCch-------hhhhHHHHHHHHHhcccC--CCC---CCCCCcchHHHHHHHHHHHHHhHHHHHH
Q 011210          189 RKATFKIIANIFLGSSSDS-------VIGSVEKHYIDYAHGLIS--PFP---INLPGFSFHKAMKARDMLGEILQPVLNE  256 (491)
Q Consensus       189 ~~~~~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~--~~~---~~~p~~~~~~~~~~~~~l~~~~~~~i~~  256 (491)
                      .+++++.++.++||.+.+.       ....+.+.+.++......  ..|   .+++.+.+++..++.+.+.++.+..|+.
T Consensus       205 ~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  205 YRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998543       223444554444432211  122   2467778899999999999999999988


Q ss_pred             HHHchhhhcc---c-cccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHH
Q 011210          257 RRAMKSDEQK---G-RKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQE  332 (491)
Q Consensus       257 ~~~~~~~~~~---~-~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~  332 (491)
                      +.+..+....   . ...+...+.++      .++.+++...++++++||.||||.++.|+||+|++||++|++|++|+.
T Consensus       285 ~l~~l~~~~~~~~~~~~~l~~~L~~~------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~  358 (519)
T KOG0159|consen  285 ALEELEKQDSAGSEYTGSLLELLLRK------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEIL  358 (519)
T ss_pred             HHHHHHhccccccchhHHHHHHHHHc------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence            8876654433   1 23344444443      489999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCC
Q 011210          333 DIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPK  412 (491)
Q Consensus       333 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  412 (491)
                      ++..+.   ...++.+++.+||||.||||||+|+||.+|+..|...+|.+|+||.|||||.|.++.+...+||+.|++|+
T Consensus       359 ~~~p~~---~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~  435 (519)
T KOG0159|consen  359 AVLPSG---NSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPE  435 (519)
T ss_pred             hhCCCc---ccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCcc
Confidence            998642   22389999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCC-CCCccccccCCCCCCCeEEEe
Q 011210          413 QFDPSRWDNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNP-ECPAEYLPVPRPSDQCLAKVV  488 (491)
Q Consensus       413 ~F~PeRfl~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  488 (491)
                      +|+||||++++   .++..++|||.|+|+|+|+++|.+|+-++||.++++|+++..++ +.+.....+..|..++..+|+
T Consensus       436 ~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~f~  515 (519)
T KOG0159|consen  436 EFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFKFR  515 (519)
T ss_pred             ccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcceeee
Confidence            99999999876   46788999999999999999999999999999999999998864 344455568999999999999


Q ss_pred             ccC
Q 011210          489 GFK  491 (491)
Q Consensus       489 ~~~  491 (491)
                      +|.
T Consensus       516 ~r~  518 (519)
T KOG0159|consen  516 PRN  518 (519)
T ss_pred             eCC
Confidence            874


No 26 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.7e-69  Score=534.41  Aligned_cols=415  Identities=22%  Similarity=0.368  Sum_probs=329.4

Q ss_pred             hhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccccccc-cccccccceeeccchhHH
Q 011210           64 AFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPTST-NKLTFRGSFITASKEGQK  141 (491)
Q Consensus        64 ~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~~~-~~~~g~~~l~~~~g~~~~  141 (491)
                      .+.++..+..+.+|+++||+  ||++++|+.++++|+||+.++++|..+. .+.+...... ....| .+++..+|+.|+
T Consensus       147 ~i~~g~~~~~l~~lh~kYGp--I~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g-~~l~~~dge~wr  223 (633)
T PLN02738        147 AVRGEAFFIPLYELFLTYGG--IFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG-KGLIPADGEIWR  223 (633)
T ss_pred             HhcCchHHHHHHHHHHHhCC--EEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC-CceecCCcHHHH
Confidence            34467789999999999999  9999999889999999999999998754 3443322111 12234 567778999999


Q ss_pred             HHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHHHHHHhcCCCCchhh--hhHHHHH
Q 011210          142 RIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKIIANIFLGSSSDSVI--GSVEKHY  216 (491)
Q Consensus       142 ~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~--~~~~~~~  216 (491)
                      ++|+.+.+ .|+..++..+.+.+.+.++.+++++.   ..++++|+...+..+++++++.++||.+++...  +.+.+.+
T Consensus       224 ~rRr~l~p-~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~  302 (633)
T PLN02738        224 VRRRAIVP-ALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAV  302 (633)
T ss_pred             HHHHhccH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHH
Confidence            99999999 99999999999999999999998874   345589999999999999999999999865321  2222222


Q ss_pred             HHHHh----cccCCCC-CCCCCc-----chHHHHHHHHHHHHHhHHHHHHHHHchhhh---------ccccccHHHHHHh
Q 011210          217 IDYAH----GLISPFP-INLPGF-----SFHKAMKARDMLGEILQPVLNERRAMKSDE---------QKGRKGLIDLLME  277 (491)
Q Consensus       217 ~~~~~----~~~~~~~-~~~p~~-----~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~ll~  277 (491)
                      .....    .....++ +.+|..     ..++..++.+.+.+.++++++.+++.....         ...+.|+++.+++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~  382 (633)
T PLN02738        303 YTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLA  382 (633)
T ss_pred             HHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHH
Confidence            22221    1111122 212211     123344455566666666665443321100         1124689999987


Q ss_pred             hhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHH
Q 011210          278 VEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLA  357 (491)
Q Consensus       278 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~  357 (491)
                      ..    ..++++++.++++.+++||+|||+++++|++++|++||++|+|||+|++++++.    .. ++.+++++||||+
T Consensus       383 ~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~----~~-~t~edL~kLPYL~  453 (633)
T PLN02738        383 SG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD----RF-PTIEDMKKLKYTT  453 (633)
T ss_pred             cC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC----CC-CCHHHHccCHHHH
Confidence            53    258999999999999999999999999999999999999999999999999862    33 8999999999999


Q ss_pred             HHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC------CCCCCccc
Q 011210          358 KVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT------TRPGSFIP  431 (491)
Q Consensus       358 a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~------~~~~~~~~  431 (491)
                      |||+|+||++|+++.++|++.+|.+++||.|||||.|+++.|.+||||++||||++|+||||+...      .....++|
T Consensus       454 AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vp  533 (633)
T PLN02738        454 RVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLP  533 (633)
T ss_pred             HHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeC
Confidence            999999999999999889999999999999999999999999999999999999999999998431      23467999


Q ss_pred             ccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccc--cccCCCCCCCeEEEeccC
Q 011210          432 FGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       432 Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                      ||.|+|.|+|++||++|++++||.|+++|+|++.++..+...  ..+.+|.++++|++++|.
T Consensus       534 FG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        534 FGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECC
Confidence            999999999999999999999999999999998766433333  346889999999999874


No 27 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=5.4e-70  Score=538.64  Aligned_cols=431  Identities=29%  Similarity=0.509  Sum_probs=353.8

Q ss_pred             CCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccccc-cc
Q 011210           46 PPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYPT-ST  123 (491)
Q Consensus        46 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~-~~  123 (491)
                      ||||+++|++||++.+.+   .+++++++.+++++||+  ||++++++.++++|+||+.+++++..++ .+...... .+
T Consensus         1 Ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~--i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~   75 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---KGNPHEFFRELHKKYGP--IFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWF   75 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---THHHHHHHHHHHHHHTS--EEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---CCcHHHHHHHHHHHhCC--EEEEeEecccccccccchhhcccccccccccccccccccc
Confidence            799999999999999984   35789999999999999  9999999999999999999999999976 44443221 12


Q ss_pred             c---ccccccceeeccchhHHHHHHhhhccCcChh-hhHHHHHHHHHHHHHHHhhhhc---CCCCeehHHHHHHHHHHHH
Q 011210          124 N---KLTFRGSFITASKEGQKRIRKLATSPLKGHK-AIVVYIDNIEEIVIKSLKGWAS---LDTPIEFLTEMRKATFKII  196 (491)
Q Consensus       124 ~---~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~---~~~~vdl~~~~~~~~~~~~  196 (491)
                      .   ...+..+++..+++.|+++|+++.+ .|+.. .+ .+.+.+.+.++.+++.+..   .+..+|+.+.++.++++++
T Consensus        76 ~~~~~~~~~~~l~~~~~~~~~~~R~~~~~-~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i  153 (463)
T PF00067_consen   76 EIFRGPFGGKGLFFSDGERWRRQRRLLAP-AFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVI  153 (463)
T ss_dssp             HHHHHHHTTTSSTTSSHHHHHHHHHHHHH-HHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccc-cccccccc-ccccccccccccccccccccccccceeeeeccccccccccc
Confidence            1   1234477888889999999999999 77777 66 8999999999999998842   2226999999999999999


Q ss_pred             HHHhcCCCCchhh----hhHHHHHHHHHhc-------ccCCCC--CCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhh
Q 011210          197 ANIFLGSSSDSVI----GSVEKHYIDYAHG-------LISPFP--INLPGFSFHKAMKARDMLGEILQPVLNERRAMKSD  263 (491)
Q Consensus       197 ~~~~fG~~~~~~~----~~~~~~~~~~~~~-------~~~~~~--~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  263 (491)
                      ++++||.+.+...    ..+.+.+..+...       ....+|  .+++....+...++.+.+.+++.+.+++++++...
T Consensus       154 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  154 GRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccccccceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999854221    2333333333221       111123  23444455566677889999999999999988766


Q ss_pred             hccccccHHHHHHhhh-hhcCC-CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC
Q 011210          264 EQKGRKGLIDLLMEVE-DENGT-KLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST  341 (491)
Q Consensus       264 ~~~~~~~~~~~ll~~~-~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  341 (491)
                      ......|+++.+++.. +.++. .++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|++++.+..   
T Consensus       234 ~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---  310 (463)
T PF00067_consen  234 GDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG---  310 (463)
T ss_dssp             SSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS---
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence            5223689999999987 44443 799999999999999999999999999999999999999999999999998532   


Q ss_pred             CCCCCHHHHhccHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCC
Q 011210          342 QKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWD  420 (491)
Q Consensus       342 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl  420 (491)
                      .. ++.+++++||||+|||+|++|++|+++ .++|.+.+|++++|+.|||||.|+++.+++|+||++|+||++|+||||+
T Consensus       311 ~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  311 RE-ITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SS-HHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             cc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            23 899999999999999999999999999 6889999999999999999999999999999999999999999999999


Q ss_pred             CCC----CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCC-cccc--ccCCCCCCCeEEE
Q 011210          421 NHT----TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECP-AEYL--PVPRPSDQCLAKV  487 (491)
Q Consensus       421 ~~~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~--~~~~~~~~~~~~~  487 (491)
                      +.+    .....++|||.|+|.|||+++|++|+++++|+|+++||+++.++... ....  ....|+.++.|.|
T Consensus       390 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  390 DERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            875    46789999999999999999999999999999999999999764432 2222  3678888888875


No 28 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.1e-68  Score=523.79  Aligned_cols=430  Identities=19%  Similarity=0.308  Sum_probs=335.5

Q ss_pred             CCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc-ccc
Q 011210           46 PPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP-TST  123 (491)
Q Consensus        46 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~-~~~  123 (491)
                      ||||+++|++||++++..    .+++.++.+|+++||+  +|++++++.++++|+||+.+++++.++. .|..+.. ...
T Consensus         1 ppgp~~lP~iG~l~~~~~----~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~   74 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE----KKPHRTFTKWSEIYGP--IYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL   74 (466)
T ss_pred             CcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCC--eEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH
Confidence            699999999999988863    4689999999999999  9999999999999999999999998754 5544321 222


Q ss_pred             ccccccc-ceeec-cchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh-----cCCCCeehHHHHHHHHHHHH
Q 011210          124 NKLTFRG-SFITA-SKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA-----SLDTPIEFLTEMRKATFKII  196 (491)
Q Consensus       124 ~~~~g~~-~l~~~-~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~vdl~~~~~~~~~~~~  196 (491)
                      ..+.|.. .++.. +|+.|+++||.+.+.+++...++.+.+.+.+.++.+++.+.     ..++++|+.+.+..++++++
T Consensus        75 ~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi  154 (466)
T PLN02655         75 TVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLS  154 (466)
T ss_pred             HHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHH
Confidence            2233433 34444 48999999987776588877788888877777666666542     13458999999999999999


Q ss_pred             HHHhcCCCCchhh-h----------hHHHHHHHHHhcc-----cCCCCC--CCCCcchHH-HHHHHHHHHHHhHHHHHHH
Q 011210          197 ANIFLGSSSDSVI-G----------SVEKHYIDYAHGL-----ISPFPI--NLPGFSFHK-AMKARDMLGEILQPVLNER  257 (491)
Q Consensus       197 ~~~~fG~~~~~~~-~----------~~~~~~~~~~~~~-----~~~~~~--~~p~~~~~~-~~~~~~~l~~~~~~~i~~~  257 (491)
                      +.++||.+.+... .          .+...+..+....     ..++|.  ++|...+.+ ..+....+.+++.++++++
T Consensus       155 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  234 (466)
T PLN02655        155 LIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQ  234 (466)
T ss_pred             HHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999998754321 1          1111222222211     112221  233222222 2223344567777888777


Q ss_pred             HHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhc
Q 011210          258 RAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKK  337 (491)
Q Consensus       258 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  337 (491)
                      ++....+.. ..|+++.+++..+    .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.
T Consensus       235 ~~~~~~~~~-~~d~l~~ll~~~~----~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~  309 (466)
T PLN02655        235 KKRIARGEE-RDCYLDFLLSEAT----HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD  309 (466)
T ss_pred             HHhhcCCCC-cccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence            654332222 4689999997642    58999999999999999999999999999999999999999999999999873


Q ss_pred             CCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc-ceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 011210          338 RPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS-FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDP  416 (491)
Q Consensus       338 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  416 (491)
                          .. ++.+++++||||+|||+|+||++|+++.. +|.+.+|++++|+.|||||.|+++.+++|||+++|+||++|+|
T Consensus       310 ----~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P  384 (466)
T PLN02655        310 ----ER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDP  384 (466)
T ss_pred             ----CC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCc
Confidence                22 89999999999999999999999999875 7999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Cc-cccccCCCCCCCeEEEeccC
Q 011210          417 SRWDNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PA-EYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       417 eRfl~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~  491 (491)
                      |||++.+   .....++|||+|+|.|||+.||..+++++++.|+++|+|++.++.. .. ....+..+.+++.|++++|.
T Consensus       385 eR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        385 ERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             cccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecC
Confidence            9999754   2346899999999999999999999999999999999999875532 11 12234678999999998773


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=6.9e-67  Score=513.23  Aligned_cols=431  Identities=22%  Similarity=0.326  Sum_probs=343.5

Q ss_pred             CCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCC-ccccccccccc-c
Q 011210           47 PGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDD-ENFKMGYPTST-N  124 (491)
Q Consensus        47 Pgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~-~~~~~~~~~~~-~  124 (491)
                      .|-.|||++|..+++..+..++.++..+.+|+++||+  ||++++|+.++++++||+++++++++. +.+........ .
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGP--VYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCC--EEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            7788999999999999888888999999999999999  999999999999999999999999875 34444322222 2


Q ss_pred             ccccccceeeccchhHHHHHHhhhccCcChhhhHHHHH-HHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHHHHHHh
Q 011210          125 KLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYID-NIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKIIANIF  200 (491)
Q Consensus       125 ~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~~~~~~  200 (491)
                      .++| .+++..+|+.|+++||++++ .|+..++..+.+ .+.++++.+++.+.   .++.++|+.+.+..+++++++.++
T Consensus        93 ~~~~-~~i~~~~g~~wk~~Rk~l~~-~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         93 FLFG-SGFAIAEGELWTARRRAVVP-SLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             HHhc-CccccCCchHHHHHHHhhcC-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            2345 56777899999999999999 889888888755 66777888888763   234589999999999999999999


Q ss_pred             cCCCCchhh--hhHHHHHHHHHhc----ccCCCCCC-CC-----CcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc---
Q 011210          201 LGSSSDSVI--GSVEKHYIDYAHG----LISPFPIN-LP-----GFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ---  265 (491)
Q Consensus       201 fG~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~-~p-----~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~---  265 (491)
                      ||.+.+...  ..+.+.+......    ....+|.+ .+     ....++..++.+.+.+++.+.++++++..+...   
T Consensus       171 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~  250 (489)
T PLN02936        171 FNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVI  250 (489)
T ss_pred             cCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            999865422  1222222221111    11112211 01     112335667778888888888887665322110   


Q ss_pred             -------cccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcC
Q 011210          266 -------KGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKR  338 (491)
Q Consensus       266 -------~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  338 (491)
                             ..+.|+++.+++..+    .++++++.++++.+++||+|||+++++|++++|++||++|+|+|+|++++++. 
T Consensus       251 ~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-  325 (489)
T PLN02936        251 EGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-  325 (489)
T ss_pred             ccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-
Confidence                   114679999987542    48999999999999999999999999999999999999999999999999863 


Q ss_pred             CCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcc-eeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCC
Q 011210          339 PSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSF-REAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPS  417 (491)
Q Consensus       339 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~Pe  417 (491)
                         .. ++.+++++||||+|||+||||++|+++... |.+.+|+.++|+.||+|+.|+++.+++||||++||||++|+||
T Consensus       326 ---~~-~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        326 ---RP-PTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             ---CC-CCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence               22 789999999999999999999999998655 5556778789999999999999999999999999999999999


Q ss_pred             CCCCCCC------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCC-ccccccCCCCCCCeEEEecc
Q 011210          418 RWDNHTT------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECP-AEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       418 Rfl~~~~------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  490 (491)
                      ||+..+.      ....++|||.|+|.|+|++||++|++++++.|+++|++++++++.. .....+..|+++++|++++|
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  481 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYMTVSRR  481 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEEEEEee
Confidence            9996431      2357999999999999999999999999999999999998765421 12224577899999999976


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.2e-64  Score=493.35  Aligned_cols=418  Identities=20%  Similarity=0.278  Sum_probs=327.5

Q ss_pred             CccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc--cccccccc
Q 011210           52 WPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP--TSTNKLTF  128 (491)
Q Consensus        52 ~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~--~~~~~~~g  128 (491)
                      .++.|+.....     .+.+.++..+.++++. ++++++.++.  ++++||+.+++++..+. .+.+..+  .....+.|
T Consensus        49 ~~~~g~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g  120 (502)
T PLN02426         49 AYLTASWAKDF-----DNLCDWYAHLLRRSPT-GTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG  120 (502)
T ss_pred             CCccHHHHHhc-----ccHHHHHHHHHHhCCC-cEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC
Confidence            45778776654     2567888788888873 3888877665  89999999999998753 4443322  22334456


Q ss_pred             ccceeeccchhHHHHHHhhhccCcChhhhHHHH--HHHHHHHHHHHhhhh-----cCCCCeehHHHHHHHHHHHHHHHhc
Q 011210          129 RGSFITASKEGQKRIRKLATSPLKGHKAIVVYI--DNIEEIVIKSLKGWA-----SLDTPIEFLTEMRKATFKIIANIFL  201 (491)
Q Consensus       129 ~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~-----~~~~~vdl~~~~~~~~~~~~~~~~f  201 (491)
                       .++++.+|+.|+++||.+++ .|+.++++.+.  +.+.+..+.+++.+.     ..+.++|+.++++.+++++++.++|
T Consensus       121 -~gi~~~~g~~wk~~Rk~l~~-~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  198 (502)
T PLN02426        121 -RGIFNVDGDSWRFQRKMASL-ELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSF  198 (502)
T ss_pred             -CceeecCcHHHHHHHHHhHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHh
Confidence             58888999999999999999 88998888764  455666666665542     1234799999999999999999999


Q ss_pred             CCCCchhh-----hhHHHHHHHHHh----cccCCCCC------CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhcc
Q 011210          202 GSSSDSVI-----GSVEKHYIDYAH----GLISPFPI------NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQK  266 (491)
Q Consensus       202 G~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~------~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  266 (491)
                      |.+.+...     ..+.+.+..+..    .....+|+      +++....++..++.+.+.+++.+.|+++++....   
T Consensus       199 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~---  275 (502)
T PLN02426        199 GLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFS---  275 (502)
T ss_pred             CCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccC---
Confidence            99864321     223333333221    11111121      1222234556778888999999999888764221   


Q ss_pred             ccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 011210          267 GRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLT  346 (491)
Q Consensus       267 ~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~  346 (491)
                      ...|+++.+++..      .+++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+..  ... ++
T Consensus       276 ~~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~--~~~-~t  346 (502)
T PLN02426        276 ASKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPN--QEA-AS  346 (502)
T ss_pred             CcchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC--CCC-CC
Confidence            2569999999753      37889999999999999999999999999999999999999999999987632  123 89


Q ss_pred             HHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee-CCeEeCCCCEEEEcccccccCCCCC-CCCCCCCCCCCCCCC-
Q 011210          347 IEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI-QGYFIPKGWKVLVYNRGVHYNPENY-PDPKQFDPSRWDNHT-  423 (491)
Q Consensus       347 ~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~-  423 (491)
                      .+++++||||+|||+|+||++|++|...|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+||||++.+ 
T Consensus       347 ~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        347 FEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            9999999999999999999999999888999999888 9999999999999999999999999 999999999999743 


Q ss_pred             ---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Cccc--cccCCCCCCCeEEEeccC
Q 011210          424 ---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       424 ---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                         ..+..++|||+|+|.|+|+++|++|++++++.|+++|++++.+++. ....  ..+.+|.+|++|++++|.
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence               2355799999999999999999999999999999999999864432 2222  346899999999999873


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.2e-61  Score=467.49  Aligned_cols=405  Identities=16%  Similarity=0.260  Sum_probs=307.8

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcE-------EEEeChHhHhHHhcC---
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPC-------VIVVAPEACKQVFLD---  111 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~-------vvv~~~~~~~~i~~~---  111 (491)
                      +.+.|||+.|||++|++.++.++....++..++.+.++|||++ ||+++++|.|+       |+++|++.++.+|.+   
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~-vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKST-VFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCc-eEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            5567999999999999998887655677889999999999965 99999999666       999999999999985   


Q ss_pred             -Cc-ccccccccccccccccc---ceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc---CCCCee
Q 011210          112 -DE-NFKMGYPTSTNKLTFRG---SFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS---LDTPIE  183 (491)
Q Consensus       112 -~~-~~~~~~~~~~~~~~g~~---~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~vd  183 (491)
                       ++ .+...++.... ++|..   +++..+|+.|+++||++.+ .|+ ..++.+.+.|.+.+.++++.|..   .+.++|
T Consensus        94 ~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~-~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vd  170 (480)
T PLN02648         94 DKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFE-LLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAE  170 (480)
T ss_pred             cccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHH-HHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcc
Confidence             33 45556665555 77866   6667789999999999999 888 47788999999999999999942   233799


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccC--CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHH---
Q 011210          184 FLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLIS--PFPINLPGFSFHKAMKARDMLGEILQPVLNERR---  258 (491)
Q Consensus       184 l~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~---  258 (491)
                      +.+.+..++++++++++||.+.+.  ..+.+.+..+..++..  .+|..            ...+...+++.+.++.   
T Consensus       171 v~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~------------~~~l~~~~~~~i~~~~~~~  236 (480)
T PLN02648        171 FNDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLA------------STGLPHVLEELLLHTFPLP  236 (480)
T ss_pred             ccchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHH------------HcCchHHHHHHhhcccCCc
Confidence            999999999999999999987654  1222222222221110  01110            0000011111111000   


Q ss_pred             -----HchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHH-HHhcccccHHHHHHHHHHHHhhCch-HHHHHHHHH
Q 011210          259 -----AMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLIS-FLSAGHESSAHIATWALIHLHKHPQ-TLRKAKEEQ  331 (491)
Q Consensus       259 -----~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p~-~~~~lr~Ei  331 (491)
                           .......+.-.+.++.+++..+++  +++++++.++++. +.+++++|++++++|++++|++||+ +|+++++|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei  314 (480)
T PLN02648        237 FFLVKSDYDKLYDFFRASATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEV  314 (480)
T ss_pred             hhhhhccHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence                 000000000011223444443333  4999999999875 4466788888999999999999995 999999999


Q ss_pred             HHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeC----CeEeCCCCEEEEcccccccCCCC
Q 011210          332 EDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQ----GYFIPKGWKVLVYNRGVHYNPEN  407 (491)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~----g~~ip~G~~v~~~~~~~~~d~~~  407 (491)
                      +++.+..  +.. ++.+++++||||++||+|+||++|++++..|.+.+|++++    ||.||||+.|+++.+.+||||++
T Consensus       315 ~~~~~~~--~~~-~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~  391 (480)
T PLN02648        315 RSAVKAG--GGG-VTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKV  391 (480)
T ss_pred             HHHhccC--CCC-CCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCccc
Confidence            9998531  223 8999999999999999999999999999999999999996    79999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCC-CCCCCcccc---------cCCCCCCccHHHHHHHHHHHHHHHHhcCe-EeccCCCC
Q 011210          408 YPDPKQFDPSRWDNHT-TRPGSFIPF---------GGGSRICPGADLAKLEISIFIHYFLLNYK-LELQNPEC  469 (491)
Q Consensus       408 ~~~p~~F~PeRfl~~~-~~~~~~~~F---------g~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~  469 (491)
                      |+||++|+||||++.+ .....+++|         |+|+|.|+|+.||++|++++++.|+++|+ |++.++..
T Consensus       392 ~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        392 FDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             CCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence            9999999999998643 222344554         56779999999999999999999999998 99865433


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.6e-57  Score=430.99  Aligned_cols=380  Identities=30%  Similarity=0.427  Sum_probs=317.1

Q ss_pred             chHHHHHHHHHcCCcceEEeeeCCCc--EEEEeChHhHhHHhcCCcccccccccc-----ccccccccceeeccchhHHH
Q 011210           70 PQSFIYNLFERYGRKGIYRNHIFGSP--CVIVVAPEACKQVFLDDENFKMGYPTS-----TNKLTFRGSFITASKEGQKR  142 (491)
Q Consensus        70 ~~~~~~~~~~~yG~~~v~~~~~~~~~--~vvv~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~g~~~l~~~~g~~~~~  142 (491)
                      +......+.+.||.  ++.++..++.  .++++++++++++++++..+++.....     ....+|..+++..||+.|.+
T Consensus        24 ~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGD--YFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCch--hhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHH
Confidence            44555667888888  8888776665  899999999999999975333222211     23555655688899999999


Q ss_pred             HHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhc
Q 011210          143 IRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHG  222 (491)
Q Consensus       143 ~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~  222 (491)
                      +||++++ .|+++.++.+.+.+.+.++++++.+ ..+..+++.+.+..++.++++ .+||.+.++...........+.. 
T Consensus       102 ~Rkl~~~-~F~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-  177 (411)
T COG2124         102 LRKLLAP-AFTPRALRGYRPLIREIADRLLDDL-WQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-  177 (411)
T ss_pred             HHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHhc-ccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-
Confidence            9999999 9999999999999999999999998 444478889999999999999 99999977643332222222221 


Q ss_pred             ccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcc
Q 011210          223 LISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAG  302 (491)
Q Consensus       223 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag  302 (491)
                         ..+...+.....+..++...+.+++..+|++++.+.      .+|+++.++.+.++++..++++|+.++++.+++||
T Consensus       178 ---~~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~~------~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AG  248 (411)
T COG2124         178 ---LDPDLGPEEPWRRARAARRELDAYLRALIAERRAAP------RDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAG  248 (411)
T ss_pred             ---cCcccCCcccHHHHHHHHHHHHHHHHHHHHHhccCC------cccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhh
Confidence               113344444577889999999999999999998432      78999999998876655799999999999999999


Q ss_pred             cccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccce
Q 011210          303 HESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVN  382 (491)
Q Consensus       303 ~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~  382 (491)
                      +|||+++++|+++.|++||++++++++|.+.                    ||++++++|+||++||++...|.+++|++
T Consensus       249 heTTa~~l~~a~~~L~~~P~~~~~l~~e~~~--------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~  308 (411)
T COG2124         249 HETTANALAWALYALLRHPDQLAKLRAEPDR--------------------PLLEAVVEETLRLYPPVPLARRVATEDVE  308 (411)
T ss_pred             hHHHHHHHHHHHHHHHHCchHHHHHHhCcch--------------------HHHHHHHHHHHHhCCchhccceeccCCEe
Confidence            9999999999999999999999999999542                    78999999999999999998899999999


Q ss_pred             eCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeE
Q 011210          383 IQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKL  462 (491)
Q Consensus       383 l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~  462 (491)
                      ++|+.||||+.|+++++++||||++|++|++|+||||.      ..|+|||+|+|.|+|..||++|++++++.++++|++
T Consensus       309 igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~  382 (411)
T COG2124         309 LGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPL  382 (411)
T ss_pred             eCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999985      789999999999999999999999999999999988


Q ss_pred             eccCCCCCccccccCCCCCCCeEEEecc
Q 011210          463 ELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      ....++....+..+..+..+..+.++.+
T Consensus       383 ~~~~~~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         383 LLLAEPPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             hhcCCCCCccccccccCCCcceeeeecC
Confidence            7765433344556777777777777654


No 33 
>PF15050 SCIMP:  SCIMP protein
Probab=83.55  E-value=3.4  Score=30.90  Aligned_cols=17  Identities=29%  Similarity=0.335  Sum_probs=11.8

Q ss_pred             cCCCCCCC-CCCcccccc
Q 011210           42 KHSLPPGD-MGWPLVGNM   58 (491)
Q Consensus        42 ~~~~pPgp-~~~P~~G~~   58 (491)
                      +.++||.| ++.|+.|+.
T Consensus        66 ~~~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   66 PVQLPPLPPRGSPSPEDS   83 (133)
T ss_pred             cCCCCCCCCCCCCCcccc
Confidence            46678765 557888865


No 34 
>PHA03049 IMV membrane protein; Provisional
Probab=71.42  E-value=12  Score=24.76  Aligned_cols=23  Identities=17%  Similarity=0.291  Sum_probs=14.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhc
Q 011210            7 WLILALAIFIGTYAFVFGVLRRV   29 (491)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~   29 (491)
                      -+++.+++++++.+++|.++.+.
T Consensus         4 d~~l~iICVaIi~lIvYgiYnkk   26 (68)
T PHA03049          4 DIILVIICVVIIGLIVYGIYNKK   26 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc
Confidence            34555566666667777777763


No 35 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=69.42  E-value=4  Score=32.11  Aligned_cols=14  Identities=21%  Similarity=0.486  Sum_probs=6.6

Q ss_pred             hHHHHHHHHHHHHH
Q 011210            7 WLILALAIFIGTYA   20 (491)
Q Consensus         7 ~~~~~~~~~~~~~~   20 (491)
                      |+++++++++++++
T Consensus         2 W~l~~iii~~i~l~   15 (130)
T PF12273_consen    2 WVLFAIIIVAILLF   15 (130)
T ss_pred             eeeHHHHHHHHHHH
Confidence            55555444444433


No 36 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=68.02  E-value=13  Score=27.86  Aligned_cols=12  Identities=33%  Similarity=0.338  Sum_probs=7.8

Q ss_pred             CCccccccHHHH
Q 011210           51 GWPLVGNMLSHQ   62 (491)
Q Consensus        51 ~~P~~G~~~~~~   62 (491)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            458888865443


No 37 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=64.26  E-value=2.9  Score=35.42  Aligned_cols=43  Identities=23%  Similarity=0.239  Sum_probs=31.6

Q ss_pred             cHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEE
Q 011210          353 MEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLV  396 (491)
Q Consensus       353 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~  396 (491)
                      -....|||.|+.-+.... .+-=+..+|+.++|..|||||.++.
T Consensus        52 ~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            345688999988776433 2222346899999999999998776


No 38 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=50.93  E-value=46  Score=22.23  Aligned_cols=22  Identities=18%  Similarity=0.304  Sum_probs=13.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhc
Q 011210            8 LILALAIFIGTYAFVFGVLRRV   29 (491)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~   29 (491)
                      +++.+++++++.+++|.++.+.
T Consensus         5 ~iLi~ICVaii~lIlY~iYnr~   26 (68)
T PF05961_consen    5 FILIIICVAIIGLILYGIYNRK   26 (68)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc
Confidence            4555566666666777777664


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=49.66  E-value=9.5  Score=24.67  Aligned_cols=25  Identities=28%  Similarity=0.348  Sum_probs=19.7

Q ss_pred             HHHHHHhhCchHHHHHHHHHHHHHh
Q 011210          312 WALIHLHKHPQTLRKAKEEQEDIIK  336 (491)
Q Consensus       312 ~~l~~L~~~p~~~~~lr~Ei~~~~~  336 (491)
                      -++-||.+||++.+++.+.-..++|
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEec
Confidence            4678999999999999876555544


No 40 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=49.21  E-value=20  Score=28.16  Aligned_cols=25  Identities=24%  Similarity=0.315  Sum_probs=15.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhc
Q 011210            5 FSWLILALAIFIGTYAFVFGVLRRV   29 (491)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~   29 (491)
                      +.|+++++++++++++++....||.
T Consensus         3 ~l~~iii~~i~l~~~~~~~~~rRR~   27 (130)
T PF12273_consen    3 VLFAIIIVAILLFLFLFYCHNRRRR   27 (130)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3566666676777666655554443


No 41 
>PRK06789 flagellar motor switch protein; Validated
Probab=41.45  E-value=31  Score=23.89  Aligned_cols=39  Identities=13%  Similarity=0.018  Sum_probs=30.6

Q ss_pred             HHHHhcccCCCCCC-cceeeccc--ceeCCeEeCCCCEEEEc
Q 011210          359 VIAETLRMTNLSPS-SFREAEAD--VNIQGYFIPKGWKVLVY  397 (491)
Q Consensus       359 ~i~E~lRl~p~~~~-~~r~~~~d--~~l~g~~ip~G~~v~~~  397 (491)
                      -++|.+.+.+.+.. +-|.+.+.  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            37888999987653 55777665  55599999999999886


No 42 
>PF08173 YbgT_YccB:  Membrane bound YbgT-like protein;  InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=38.46  E-value=68  Score=17.37  Aligned_cols=22  Identities=18%  Similarity=0.304  Sum_probs=13.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHH
Q 011210            4 YFSWLILALAIFIGTYAFVFGV   25 (491)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (491)
                      |..|++..++.+.++++...++
T Consensus         3 YfaWilG~~lA~~~~i~~a~wl   24 (28)
T PF08173_consen    3 YFAWILGVLLACAFGILNAMWL   24 (28)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh
Confidence            5677777666665555544443


No 43 
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=38.24  E-value=72  Score=17.58  Aligned_cols=22  Identities=18%  Similarity=0.306  Sum_probs=14.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHH
Q 011210            4 YFSWLILALAIFIGTYAFVFGV   25 (491)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (491)
                      |..|++..++.+.++++...++
T Consensus         3 YfaWilG~~lA~~~~v~~a~w~   24 (30)
T TIGR02106         3 YFAWILGTLLACAFGVLNAMWL   24 (30)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Confidence            5678877666666666555554


No 44 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.62  E-value=65  Score=21.82  Aligned_cols=11  Identities=27%  Similarity=0.670  Sum_probs=4.7

Q ss_pred             hHHHHHHHHHH
Q 011210            7 WLILALAIFIG   17 (491)
Q Consensus         7 ~~~~~~~~~~~   17 (491)
                      |+.+++.++++
T Consensus         4 ~lail~ivl~l   14 (71)
T COG3763           4 WLAILLIVLAL   14 (71)
T ss_pred             HHHHHHHHHHH
Confidence            55443333333


No 45 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=35.88  E-value=59  Score=26.05  Aligned_cols=42  Identities=24%  Similarity=0.359  Sum_probs=28.8

Q ss_pred             eecccceeCCeEeCCCCEEEEcccc-------cccCCCCCCCCCCCCCCC
Q 011210          376 EAEADVNIQGYFIPKGWKVLVYNRG-------VHYNPENYPDPKQFDPSR  418 (491)
Q Consensus       376 ~~~~d~~l~g~~ip~G~~v~~~~~~-------~~~d~~~~~~p~~F~PeR  418 (491)
                      ...+|+.++|..||+|+.-+..+..       .|++.+.|.. ..++|+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            4468999999999999977665543       3566666644 4445444


No 46 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=35.28  E-value=16  Score=34.75  Aligned_cols=43  Identities=16%  Similarity=0.113  Sum_probs=31.8

Q ss_pred             HHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEc
Q 011210          354 EYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVY  397 (491)
Q Consensus       354 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~  397 (491)
                      ..+.|||.|+.-+.-.. .+-=+..+|+.++|..|||||.|+..
T Consensus       256 n~I~A~V~~~qtv~~G~-~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       256 NTIRACVHETQTVVDGS-AVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CceEEEEcCceEEecCC-EEEEEEcCceeeCCEEecCCCEEEEE
Confidence            45688999988877433 22223468999999999999987654


No 47 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=33.75  E-value=1.2e+02  Score=18.92  Aligned_cols=42  Identities=17%  Similarity=0.253  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHH
Q 011210          290 DIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQ  331 (491)
Q Consensus       290 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei  331 (491)
                      ++...+..++=.|.|..+-.+.-.+.+.--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666666777777777777777777888888777665


No 48 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=33.46  E-value=31  Score=22.60  Aligned_cols=14  Identities=43%  Similarity=1.013  Sum_probs=8.3

Q ss_pred             CCCCCCCCCCCCCCCCCCC
Q 011210          404 NPENYPDPKQFDPSRWDNH  422 (491)
Q Consensus       404 d~~~~~~p~~F~PeRfl~~  422 (491)
                      |+..-|     ||||||..
T Consensus        38 dp~~~P-----DPERWLP~   51 (59)
T PF08492_consen   38 DPGKTP-----DPERWLPK   51 (59)
T ss_pred             CCCCCC-----CccccCch
Confidence            555545     56777653


No 49 
>PHA02902 putative IMV membrane protein; Provisional
Probab=31.90  E-value=1.5e+02  Score=19.56  Aligned_cols=15  Identities=13%  Similarity=0.286  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHhhc
Q 011210           15 FIGTYAFVFGVLRRV   29 (491)
Q Consensus        15 ~~~~~~~~~~~~~~~   29 (491)
                      +++.+++++..+++.
T Consensus        13 v~Ivclliya~YrR~   27 (70)
T PHA02902         13 VIIFCLLIYAAYKRY   27 (70)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            334444566666665


No 50 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=29.10  E-value=1.1e+02  Score=28.07  Aligned_cols=69  Identities=19%  Similarity=0.147  Sum_probs=45.4

Q ss_pred             HHHHHHHhcccCCCCCC----cceeeccccee----CCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 011210          356 LAKVIAETLRMTNLSPS----SFREAEADVNI----QGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPG  427 (491)
Q Consensus       356 l~a~i~E~lRl~p~~~~----~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~  427 (491)
                      =+.+++.+..+.||+..    +--..+.|..+    =.-+|..||-|.++ .                         .+.
T Consensus       275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-G-------------------------spY  328 (361)
T COG1759         275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-G-------------------------SPY  328 (361)
T ss_pred             HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-C-------------------------Ccc
Confidence            37788999999998742    22444555433    22478888887665 1                         344


Q ss_pred             CcccccCCCCCCccHHHHHHHHHHHH
Q 011210          428 SFIPFGGGSRICPGADLAKLEISIFI  453 (491)
Q Consensus       428 ~~~~Fg~G~r~C~G~~la~~~~~~~l  453 (491)
                      .++-||.+  +-.|+++|. |+|.++
T Consensus       329 s~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         329 SNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             hhhhcCCC--cchhhHHHH-HHHHHH
Confidence            55666554  678999998 777654


No 51 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=28.78  E-value=86  Score=24.48  Aligned_cols=42  Identities=26%  Similarity=0.337  Sum_probs=31.2

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE  113 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~  113 (491)
                      .+....+.+|.++||.  + ++. .+...+...|++.++++..++.
T Consensus        74 ~~v~~~i~~w~~~~g~--v-~l~-~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGR--V-RLY-KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCC--E-EEe-cCeEEEEECCHHHHHHHHhChh
Confidence            3556788999999998  3 331 1456777899999999987764


No 52 
>PF04367 DUF502:  Protein of unknown function (DUF502);  InterPro: IPR007462 This entry contains proteins that are predicted to be integral membrane proteins.
Probab=28.15  E-value=1.3e+02  Score=22.70  Aligned_cols=35  Identities=14%  Similarity=0.108  Sum_probs=20.2

Q ss_pred             CccccccHHHHhhhhcCCchHHHHHHHHH-cCCcceEEeeeCC
Q 011210           52 WPLVGNMLSHQKAFKSSEPQSFIYNLFER-YGRKGIYRNHIFG   93 (491)
Q Consensus        52 ~P~~G~~~~~~~~~~~~~~~~~~~~~~~~-yG~~~v~~~~~~~   93 (491)
                      +|++|+++...+     +..+.+..-.++ +..  ++-+.+.+
T Consensus        34 iP~v~~iY~~~k-----~~~~~~~~~~~~~f~~--vVlV~~p~   69 (108)
T PF04367_consen   34 IPLVKSIYSSIK-----QLVESFSGDKKKSFKK--VVLVEFPR   69 (108)
T ss_pred             CCchHHHHHHHH-----HHHHHHhhcccccCCe--EEEEEecC
Confidence            688888776664     444444433333 444  77777643


No 53 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=27.68  E-value=28  Score=22.13  Aligned_cols=11  Identities=55%  Similarity=0.966  Sum_probs=9.2

Q ss_pred             ccccCCCCCCc
Q 011210          430 IPFGGGSRICP  440 (491)
Q Consensus       430 ~~Fg~G~r~C~  440 (491)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999985


No 54 
>COG3423 Nlp Predicted transcriptional regulator [Transcription]
Probab=26.60  E-value=5.9  Score=27.03  Aligned_cols=29  Identities=31%  Similarity=0.529  Sum_probs=21.9

Q ss_pred             EeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC
Q 011210          387 FIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT  423 (491)
Q Consensus       387 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~  423 (491)
                      ..|||..++.+...+        .|++.+|+||.+.+
T Consensus        45 p~pkgEriIA~algv--------~P~eIWp~RY~d~~   73 (82)
T COG3423          45 PWPKGERIIADALGV--------PPEEIWPSRYADPQ   73 (82)
T ss_pred             CCchHHHHHHHHhCC--------CHHHhCchhhcccc
Confidence            467888877765554        68889999998764


No 55 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=26.31  E-value=70  Score=20.47  Aligned_cols=18  Identities=11%  Similarity=0.115  Sum_probs=15.5

Q ss_pred             cCCcceEEeeeCCCcEEEEe
Q 011210           81 YGRKGIYRNHIFGSPCVIVV  100 (491)
Q Consensus        81 yG~~~v~~~~~~~~~~vvv~  100 (491)
                      -|+  +++++-||+.++|..
T Consensus         3 ~GD--vV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGD--VVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCC--EEEEccCCCCeEEEE
Confidence            378  999999999999873


No 56 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=25.13  E-value=2.3e+02  Score=20.41  Aligned_cols=17  Identities=29%  Similarity=0.534  Sum_probs=14.8

Q ss_pred             chHHHHHHHHHHHHHhc
Q 011210          321 PQTLRKAKEEQEDIIKK  337 (491)
Q Consensus       321 p~~~~~lr~Ei~~~~~~  337 (491)
                      |+..+.+|+||.+|+..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            88999999999988764


No 57 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=24.75  E-value=2.3e+02  Score=27.76  Aligned_cols=32  Identities=9%  Similarity=0.359  Sum_probs=19.6

Q ss_pred             HHHcCCcceEEeeeCCCcEEE-EeChHhHhHHhcCC
Q 011210           78 FERYGRKGIYRNHIFGSPCVI-VVAPEACKQVFLDD  112 (491)
Q Consensus        78 ~~~yG~~~v~~~~~~~~~~vv-v~~~~~~~~i~~~~  112 (491)
                      .-+||.  |++-.+-++.+.| +..++.... |.++
T Consensus       220 ~Grfg~--V~KaqL~~~~VAVKifp~~~kqs-~~~E  252 (534)
T KOG3653|consen  220 RGRFGC--VWKAQLDNRLVAVKIFPEQEKQS-FQNE  252 (534)
T ss_pred             cCccce--eehhhccCceeEEEecCHHHHHH-HHhH
Confidence            346888  9988887776666 444444433 4443


No 58 
>COG3924 Predicted membrane protein [Function unknown]
Probab=23.81  E-value=1.2e+02  Score=20.69  Aligned_cols=8  Identities=63%  Similarity=1.285  Sum_probs=6.3

Q ss_pred             CCCCCCcc
Q 011210           47 PGDMGWPL   54 (491)
Q Consensus        47 Pgp~~~P~   54 (491)
                      ||+.|+|.
T Consensus        37 ~G~~gfP~   44 (80)
T COG3924          37 PGFTGFPL   44 (80)
T ss_pred             CCCCCChH
Confidence            88888874


No 59 
>PF11027 DUF2615:  Protein of unknown function (DUF2615);  InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=23.56  E-value=1.9e+02  Score=21.60  Aligned_cols=7  Identities=29%  Similarity=0.486  Sum_probs=2.7

Q ss_pred             HHHHHHh
Q 011210           21 FVFGVLR   27 (491)
Q Consensus        21 ~~~~~~~   27 (491)
                      ++.+++|
T Consensus        67 ~~ly~~R   73 (103)
T PF11027_consen   67 MALYLLR   73 (103)
T ss_pred             HHHHHcC
Confidence            3333444


No 60 
>PRK14749 hypothetical protein; Provisional
Probab=23.24  E-value=1.4e+02  Score=16.30  Aligned_cols=22  Identities=14%  Similarity=0.279  Sum_probs=12.0

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHH
Q 011210            4 YFSWLILALAIFIGTYAFVFGV   25 (491)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (491)
                      |..|++..++...+.++-..++
T Consensus         3 YfaWiLG~~lAc~f~ilna~w~   24 (30)
T PRK14749          3 YLLWFVGILLMCSLSTLVLVWL   24 (30)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4667776555555544444443


No 61 
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.47  E-value=48  Score=33.02  Aligned_cols=33  Identities=33%  Similarity=0.673  Sum_probs=19.4

Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCc
Q 011210          402 HYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICP  440 (491)
Q Consensus       402 ~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~  440 (491)
                      ++||.+=||||.|-|-|      ....|.|=..|.|.-+
T Consensus       574 nyn~~~tPDPERWLP~r------eRS~yr~KrK~k~~~~  606 (652)
T KOG2376|consen  574 NYNPKVTPDPERWLPRR------ERSTYRPKRKGKRAAI  606 (652)
T ss_pred             cCCCCCCCChhhcccch------hccccCcccccchhhh
Confidence            45666666666666655      4555666566665333


No 62 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=22.42  E-value=1.8e+02  Score=18.45  Aligned_cols=7  Identities=14%  Similarity=0.624  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q 011210           13 AIFIGTY   19 (491)
Q Consensus        13 ~~~~~~~   19 (491)
                      +++++++
T Consensus        11 Sl~l~~~   17 (51)
T TIGR00847        11 SLLLGGV   17 (51)
T ss_pred             HHHHHHH
Confidence            3333333


No 63 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=22.20  E-value=66  Score=24.87  Aligned_cols=22  Identities=41%  Similarity=0.389  Sum_probs=18.8

Q ss_pred             eeecccceeCCeEeCCCCEEEE
Q 011210          375 REAEADVNIQGYFIPKGWKVLV  396 (491)
Q Consensus       375 r~~~~d~~l~g~~ip~G~~v~~  396 (491)
                      -++++|.+++|..||+|+.|..
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            4667799999999999999855


No 64 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=21.76  E-value=89  Score=24.52  Aligned_cols=23  Identities=22%  Similarity=0.480  Sum_probs=17.1

Q ss_pred             CCCccHHHHHHHHHHHHHHHHhc
Q 011210          437 RICPGADLAKLEISIFIHYFLLN  459 (491)
Q Consensus       437 r~C~G~~la~~~~~~~l~~ll~~  459 (491)
                      ..|.|+.||..++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            48999999999999999999875


No 65 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=21.75  E-value=1.4e+02  Score=17.48  Aligned_cols=19  Identities=21%  Similarity=0.364  Sum_probs=11.8

Q ss_pred             HHHHHHHh-hCchHHHHHHH
Q 011210          311 TWALIHLH-KHPQTLRKAKE  329 (491)
Q Consensus       311 ~~~l~~L~-~~p~~~~~lr~  329 (491)
                      ...+..++ +||++++.++.
T Consensus        16 ~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   16 QSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHhChhHHHHHHh
Confidence            33444444 78998877754


No 66 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=21.32  E-value=1.8e+02  Score=18.27  Aligned_cols=35  Identities=23%  Similarity=0.512  Sum_probs=23.7

Q ss_pred             HHHHHHHcCCcceEEeeeCCC----cEEEEeChHhHhHHhc
Q 011210           74 IYNLFERYGRKGIYRNHIFGS----PCVIVVAPEACKQVFL  110 (491)
Q Consensus        74 ~~~~~~~yG~~~v~~~~~~~~----~~vvv~~~~~~~~i~~  110 (491)
                      +.++..+||.  |-++.+...    -.|-..+.+.++....
T Consensus         1 L~~~f~~fG~--V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGE--VKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS---EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCccc--EEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            3467889999  988887543    3444578888777765


No 67 
>PF14979 TMEM52:  Transmembrane 52
Probab=21.00  E-value=2.2e+02  Score=22.67  Aligned_cols=15  Identities=7%  Similarity=-0.226  Sum_probs=8.8

Q ss_pred             CchHHHHHHHHHcCC
Q 011210           69 EPQSFIYNLFERYGR   83 (491)
Q Consensus        69 ~~~~~~~~~~~~yG~   83 (491)
                      -.+..+.++..-+||
T Consensus        76 t~hsTvTS~sSVq~P   90 (154)
T PF14979_consen   76 TLHSTVTSYSSVQYP   90 (154)
T ss_pred             cccchhhhhhccccc
Confidence            345566666665555


No 68 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.96  E-value=1.3e+02  Score=23.24  Aligned_cols=6  Identities=17%  Similarity=0.395  Sum_probs=2.2

Q ss_pred             hHHHHH
Q 011210            7 WLILAL   12 (491)
Q Consensus         7 ~~~~~~   12 (491)
                      ++++.+
T Consensus        68 ~Ii~gv   73 (122)
T PF01102_consen   68 GIIFGV   73 (122)
T ss_dssp             HHHHHH
T ss_pred             ehhHHH
Confidence            333333


No 69 
>PRK05933 type III secretion system protein; Validated
Probab=20.44  E-value=1e+02  Score=28.28  Aligned_cols=43  Identities=14%  Similarity=0.027  Sum_probs=33.6

Q ss_pred             HHHHHHHHhcccCCCCCC-cceee-cc--cceeCCeEeCCCCEEEEc
Q 011210          355 YLAKVIAETLRMTNLSPS-SFREA-EA--DVNIQGYFIPKGWKVLVY  397 (491)
Q Consensus       355 ~l~a~i~E~lRl~p~~~~-~~r~~-~~--d~~l~g~~ip~G~~v~~~  397 (491)
                      -.+--|+|.++|.+.... +-|.+ .+  |+.++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            356779999999988754 44554 34  577799999999999986


No 70 
>PF14316 DUF4381:  Domain of unknown function (DUF4381)
Probab=20.09  E-value=1.3e+02  Score=24.17  Aligned_cols=23  Identities=17%  Similarity=0.494  Sum_probs=10.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhh
Q 011210            6 SWLILALAIFIGTYAFVFGVLRR   28 (491)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~   28 (491)
                      .|-+++++++++++.++++.+++
T Consensus        22 GWwll~~lll~~~~~~~~~~~r~   44 (146)
T PF14316_consen   22 GWWLLLALLLLLLILLLWRLWRR   44 (146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445444444444444444443


Done!