Query         011210
Match_columns 491
No_of_seqs    183 out of 2075
Neff          11.0
Searched_HMMs 29240
Date          Mon Mar 25 03:26:01 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011210.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011210hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ld6_A Lanosterol 14-alpha dem 100.0 1.1E-76 3.8E-81  583.2  36.7  432   44-491    11-454 (461)
  2 2ve3_A Putative cytochrome P45 100.0 5.3E-76 1.8E-80  574.9  36.9  429   42-491    10-444 (444)
  3 3k9v_A 1,25-dihydroxyvitamin D 100.0 7.4E-74 2.5E-78  567.4  38.6  436   42-490    22-482 (482)
  4 3nxu_A Cytochrome P450 3A4; al 100.0 2.7E-74 9.2E-79  570.8  35.4  429   46-491    16-475 (485)
  5 3s79_A Cytochrome P450 19A1; o 100.0 4.7E-73 1.6E-77  564.4  40.3  434   43-491    44-496 (503)
  6 3tbg_A Cytochrome P450 2D6; mo 100.0 2.3E-73 7.7E-78  563.5  37.7  440   39-491     5-476 (479)
  7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 9.5E-73 3.3E-77  558.5  38.7  436   41-491     7-472 (476)
  8 2cib_A Cytochrome P450 51; hem 100.0 7.5E-73 2.6E-77  554.5  34.5  431   44-491     4-449 (455)
  9 3swz_A Steroid 17-alpha-hydrox 100.0 2.1E-72 7.1E-77  558.2  36.3  438   42-491     6-479 (494)
 10 1po5_A Cytochrome P450 2B4; ox 100.0 4.6E-72 1.6E-76  552.6  38.5  433   44-491    10-473 (476)
 11 3gw9_A Sterol 14alpha-demethyl 100.0 3.7E-72 1.3E-76  550.3  37.2  430   44-491     3-450 (450)
 12 2fdv_A Cytochrome P450 2A6; CY 100.0 2.9E-72 9.9E-77  554.0  36.3  433   44-491    10-473 (476)
 13 1r9o_A Cytochrome P450 2C9; mo 100.0 5.7E-72 1.9E-76  552.3  38.2  433   44-491    11-474 (477)
 14 3i3k_A Lanosterol 14-alpha dem 100.0 3.7E-72 1.3E-76  551.4  35.8  431   42-488     9-452 (461)
 15 3qz1_A Steroid 21-hydroxylase; 100.0 1.6E-72 5.4E-77  559.7  31.2  432   41-491    26-484 (496)
 16 3n9y_A Cholesterol SIDE-chain  100.0 9.4E-72 3.2E-76  552.8  34.5  438   42-491     7-475 (487)
 17 3czh_A Cytochrome P450 2R1; vi 100.0 7.9E-71 2.7E-75  544.0  38.3  436   42-490    10-475 (481)
 18 3pm0_A Cypib1, cytochrome P450 100.0 2.2E-71 7.4E-76  553.2  32.7  437   41-491     6-484 (507)
 19 2hi4_A Cytochrome P450 1A2; CY 100.0 1.2E-70 4.2E-75  544.9  35.8  432   44-490    16-487 (495)
 20 3dbg_A Putative cytochrome P45 100.0 1.8E-71 6.2E-76  547.0  29.6  406   43-468    22-439 (467)
 21 2ij2_A Cytochrome P450 BM3; mo 100.0 1.2E-70 4.3E-75  540.7  35.2  427   44-491     3-452 (470)
 22 3mdm_A Cholesterol 24-hydroxyl 100.0 1.9E-68 6.4E-73  524.5  39.2  414   67-491     9-442 (456)
 23 3v8d_A Cholesterol 7-alpha-mon 100.0 2.9E-68   1E-72  527.7  29.3  430   41-488    10-483 (491)
 24 1izo_A P450bsbeta, cytochrome  100.0 6.7E-66 2.3E-70  499.4  39.3  400   51-491     7-416 (417)
 25 3dax_A Cytochrome P450 7A1; ch 100.0 3.6E-67 1.2E-71  520.5  29.7  429   43-490    12-485 (491)
 26 2cd8_A Cytochrome P450 monooxy 100.0 2.6E-65 8.8E-70  496.4  35.1  392   44-491    26-429 (436)
 27 3awm_A Fatty acid alpha-hydrox 100.0 6.9E-65 2.3E-69  492.0  36.2  401   46-491     4-414 (415)
 28 3b6h_A Prostacyclin synthase;  100.0 8.5E-65 2.9E-69  504.0  33.2  427   42-490    16-489 (498)
 29 3b98_A Prostaglandin I2 syntha 100.0 1.7E-65 5.9E-70  506.3  27.7  420   43-491    17-471 (475)
 30 1ued_A P450 OXYC, P450 monooxy 100.0   1E-63 3.5E-68  481.2  32.4  383   40-487     6-406 (406)
 31 1jfb_A Nitric-oxide reductase  100.0 8.1E-63 2.8E-67  475.7  36.2  387   45-487     2-404 (404)
 32 1n97_A CYP175A1; electron tran 100.0 1.5E-64 5.2E-69  484.7  22.5  377   48-490     3-386 (389)
 33 1cpt_A Cytochrome P450-TERP; o 100.0 8.5E-63 2.9E-67  478.5  30.5  400   43-490     5-428 (428)
 34 3ejb_B Biotin biosynthesis cyt 100.0 4.3E-62 1.5E-66  470.7  33.5  375   68-490    13-396 (404)
 35 2zwu_A Camphor 5-monooxygenase 100.0 1.1E-62 3.6E-67  474.5  28.7  395   40-491     7-411 (415)
 36 2jjn_A Cytochrome P450 113A1;  100.0 7.3E-62 2.5E-66  469.4  33.1  373   69-490    29-406 (411)
 37 3aba_A Cytochrome P450; oxidor 100.0 8.2E-62 2.8E-66  467.5  32.7  371   68-491    19-403 (403)
 38 2zbx_A Cytochrome P450-SU1; be 100.0   2E-61   7E-66  466.1  35.1  387   44-488     5-407 (412)
 39 3a4g_A Vitamin D hydroxylase;  100.0 3.3E-61 1.1E-65  463.9  36.3  370   68-491    20-402 (411)
 40 2dkk_A Cytochrome P450; CYP158 100.0 1.5E-61 5.1E-66  465.9  33.0  371   67-491    26-411 (411)
 41 3buj_A CALO2; heme, iron, meta 100.0   3E-61   1E-65  463.2  32.7  371   69-491    14-397 (397)
 42 3dsk_A Cytochrome P450 74A, ch 100.0   4E-62 1.4E-66  484.4  26.7  402   41-467    25-472 (495)
 43 3ivy_A Cytochrome P450 CYP125; 100.0 1.8E-61 6.1E-66  469.3  30.4  393   42-491    16-429 (433)
 44 1s1f_A Putative cytochrome P45 100.0 2.9E-61   1E-65  464.1  31.6  382   44-488     8-405 (406)
 45 4fb2_A P450CIN; heme, monooxyg 100.0   2E-61 6.8E-66  464.6  30.0  370   68-491    19-394 (398)
 46 3nc3_A Cytochrome P450 CYPX; c 100.0 3.1E-62 1.1E-66  475.1  24.6  381   68-489    53-440 (441)
 47 2z3t_A Cytochrome P450; monoxy 100.0 5.1E-61 1.7E-65  464.6  31.6  375   69-490    21-416 (425)
 48 1q5d_A P450 epoxidase; cytochr 100.0 4.8E-61 1.6E-65  464.6  31.3  376   68-491    26-417 (419)
 49 2xkr_A CYP142, putative cytoch 100.0 1.6E-60 5.4E-65  458.3  34.1  373   68-491    18-395 (398)
 50 2y5n_A MYCG, P-450-like protei 100.0 2.7E-60 9.1E-65  458.1  35.1  369   68-487    37-417 (417)
 51 1z8o_A 6-deoxyerythronolide B  100.0 2.2E-60 7.4E-65  458.0  33.4  369   68-488    14-403 (404)
 52 2uuq_A CYP130, cytochrome P450 100.0 1.3E-61 4.4E-66  467.2  24.7  373   68-490    25-413 (414)
 53 3dan_A Cytochrome P450 74A2; A 100.0 3.9E-61 1.3E-65  474.9  28.6  400   42-467     7-454 (473)
 54 1odo_A Putative cytochrome P45 100.0 2.9E-60   1E-64  457.7  33.6  371   68-489    15-407 (408)
 55 3abb_A CYP105D6, cytochrome P4 100.0 4.9E-61 1.7E-65  463.2  28.0  370   68-491    24-408 (408)
 56 3lxh_A Cytochrome P450; heme,  100.0 1.1E-60 3.8E-65  462.6  30.0  375   68-490    38-417 (421)
 57 1gwi_A CYP154C1, cytochrome P4 100.0 9.9E-61 3.4E-65  460.9  29.1  373   68-491    17-410 (411)
 58 3r9b_A Cytochrome P450 164A2;  100.0 1.2E-60   4E-65  462.8  29.6  385   58-490    19-417 (418)
 59 2xbk_A PIMD protein; epoxidati 100.0 1.4E-59 4.6E-64  450.9  35.6  362   68-487    26-404 (404)
 60 2wm5_A CYP124, putative cytoch 100.0 8.3E-60 2.8E-64  457.2  34.1  374   69-488    45-435 (435)
 61 3mgx_A Putative P450 monooxyge 100.0   3E-60   1E-64  457.1  30.6  369   68-490    37-415 (415)
 62 3tyw_A Putative cytochrome P45 100.0   2E-59 6.9E-64  453.2  35.2  365   68-484    29-408 (417)
 63 2z36_A MOXA, cytochrome P450 t 100.0 1.9E-59 6.5E-64  451.9  34.6  368   68-488    22-408 (413)
 64 3oft_A Cytochrome P450, CYP101 100.0 2.9E-60   1E-64  456.6  28.8  368   68-488    24-395 (396)
 65 3tkt_A Cytochrome P450; aromat 100.0 4.1E-60 1.4E-64  461.8  29.3  378   70-489    47-449 (450)
 66 3rwl_A Cytochrome P450 alkane  100.0 9.7E-59 3.3E-63  448.5  36.5  376   67-489    37-426 (426)
 67 1lfk_A OXYB, P450 monooxygenas 100.0 2.9E-59 9.9E-64  449.3  27.8  361   73-487    18-398 (398)
 68 1n40_A P450 MT2, cytochrome P4 100.0 8.5E-59 2.9E-63  445.4  29.2  363   68-487    16-396 (396)
 69 3oo3_A OXY protein; cytochrome 100.0 2.7E-58 9.1E-63  441.1  32.2  362   68-487    12-384 (384)
 70 2wiy_A XPLA-heme, cytochrome P 100.0 1.2E-57 3.9E-62  437.0  34.4  369   69-487    21-393 (394)
 71 3b4x_A 367AA long hypothetical 100.0 1.5E-57 5.2E-62  431.9  31.1  352   70-489     1-366 (367)
 72 3p3o_A Cytochrome P450; monoox 100.0 7.5E-58 2.6E-62  441.5  29.2  371   68-489    33-415 (416)
 73 1io7_A Cytochrome P450 CYP119; 100.0 3.7E-57 1.3E-61  430.0  32.4  354   70-491     1-368 (368)
 74 2rfb_A Cytochrome P450; heme,  100.0 1.7E-56 5.7E-61  421.3  26.4  336   79-485     2-342 (343)
 75 4dnj_A Putative cytochrome P45 100.0 1.8E-55 6.3E-60  423.7  29.2  384   49-489    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 3.7E-53 1.3E-57  406.6  29.4  375   68-488    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 3.7E-50 1.3E-54  376.9   4.5  334   45-487    35-381 (381)
 78 3lqv_A PRE-mRNA branch site pr  38.1      50  0.0017   23.8   4.9   57   45-110     3-65  (115)
 79 4fu3_A Regulation of nuclear P  32.3      74  0.0025   23.9   5.1   71  285-366     3-73  (135)
 80 2krb_A Eukaryotic translation   31.6      49  0.0017   21.9   3.6   40   70-111    20-66  (81)
 81 2l9u_A Receptor tyrosine-prote  30.7      40  0.0014   18.2   2.2    6   22-27     26-31  (40)
 82 3d2w_A TAR DNA-binding protein  28.1      57  0.0019   22.3   3.5   53   47-108     8-64  (89)
 83 2ks1_B Epidermal growth factor  27.5      73  0.0025   18.6   3.2    6   23-28     32-37  (44)
 84 2diu_A KIAA0430 protein; struc  27.2      74  0.0025   22.4   3.8   53   53-111    12-65  (96)
 85 2wbr_A GW182, gawky, LD47780P;  26.8      77  0.0026   21.9   3.8   51   51-110     8-61  (89)
 86 1m46_B IQ4, IQ4 motif from MYO  24.7      61  0.0021   15.5   2.0   12  322-333     8-19  (26)

No 1  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=1.1e-76  Score=583.15  Aligned_cols=432  Identities=20%  Similarity=0.338  Sum_probs=370.2

Q ss_pred             CCCCCCCC-CccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccc--c
Q 011210           44 SLPPGDMG-WPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMG--Y  119 (491)
Q Consensus        44 ~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~--~  119 (491)
                      +.||+|++ ||++||++++.+     +++.++.++++|||+  ||++++++.++++|+||+.+++++.+++ .+...  +
T Consensus        11 ~~PP~~~~~lP~iG~~~~~~~-----~~~~~~~~~~~kYG~--i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~   83 (461)
T 3ld6_A           11 KSPPYIFSPIPFLGHAIAFGK-----SPIEFLENAYEKYGP--VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVY   83 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHH
T ss_pred             CCCCCCCCCcCeeeeHHHhhh-----CHHHHHHHHHHHhCC--EEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcch
Confidence            45677765 899999999885     899999999999999  9999999999999999999999998765 44332  1


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANI  199 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~  199 (491)
                      .......+|...++..+|+.|+++|+++.+ .|+...+..+.+.+.+.++++++.+.+.+ .+|+.+.+..+++++++.+
T Consensus        84 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~  161 (461)
T 3ld6_A           84 SRLTTPVFGKGVAYDVPNPVFLEQKKMLKS-GLNIAHFKQHVSIIEKETKEYFESWGESG-EKNVFEALSELIILTASHC  161 (461)
T ss_dssp             HHHHHHHHCTTSGGGSCHHHHHHHHHHHHH-HSSHHHHHHHHHHHHHHHHHHGGGGCSEE-EEEHHHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHhccc-cccHHHHhhhhHHHHHHHHHHHHHHhhcC-CccHHHHHHHHHHHHHHHH
Confidence            222334456555566789999999999999 99999999999999999999999997666 8999999999999999999


Q ss_pred             hcCCCCchhh-hhHHHHHHHHHhcccC---CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHH
Q 011210          200 FLGSSSDSVI-GSVEKHYIDYAHGLIS---PFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLL  275 (491)
Q Consensus       200 ~fG~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l  275 (491)
                      +||.+.++.. +.+...+..+...+..   .+|.++|...+.+..++.+.+.+++.+.+++++.+.+.    .+|+++.+
T Consensus       162 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~----~~d~l~~l  237 (461)
T 3ld6_A          162 LHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEK----IDDILQTL  237 (461)
T ss_dssp             HTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC----CCSHHHHH
T ss_pred             HcCcchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----Ccchhhhh
Confidence            9998754432 3334444444333221   35667787777888888899999999999887754322    57999999


Q ss_pred             HhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHH
Q 011210          276 MEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEY  355 (491)
Q Consensus       276 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~  355 (491)
                      +++.++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+|+|++++.+..   ...++.+++++|||
T Consensus       238 l~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~---~~~~~~~~l~~lpy  314 (461)
T 3ld6_A          238 LDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN---LPPLTYDQLKDLNL  314 (461)
T ss_dssp             HTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT---CCCCCHHHHHTCHH
T ss_pred             HHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhccc---ccchhHHHHHHHhh
Confidence            998877777899999999999999999999999999999999999999999999999998743   22389999999999


Q ss_pred             HHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC---CCCCCcccc
Q 011210          356 LAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT---TRPGSFIPF  432 (491)
Q Consensus       356 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~---~~~~~~~~F  432 (491)
                      |+|||+|+||++|+++...|.+++|++++||.||||+.|+++.+++||||++|+||++|+||||++.+   .+...|+||
T Consensus       315 l~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~pF  394 (461)
T 3ld6_A          315 LDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPF  394 (461)
T ss_dssp             HHHHHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCTT
T ss_pred             hhheeeeccccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999876   356789999


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEeccC
Q 011210          433 GGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       433 g~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      |+|+|.|+|++||++|++++++.|+++|||+++++. +...+..+..++.++.|+|+||.
T Consensus       395 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rs  454 (461)
T 3ld6_A          395 GAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRS  454 (461)
T ss_dssp             CCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC
T ss_pred             CCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECC
Confidence            999999999999999999999999999999998764 33445556666778999999985


No 2  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=5.3e-76  Score=574.92  Aligned_cols=429  Identities=28%  Similarity=0.513  Sum_probs=363.5

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      +.+.||||+++|++||++.+..     +++ ++.+++++||+  ||+++++|.++++++||+.+++++.+++ .+.+.+.
T Consensus        10 ~~~~pPgp~~~P~iG~~~~~~~-----~~~-~~~~~~~~yg~--v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~   81 (444)
T 2ve3_A           10 SLPIPPGDFGLPWLGETLNFLN-----DGD-FGKKRQQQFGP--IFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP   81 (444)
T ss_dssp             CCCCCCCCCCBTTTBTHHHHHH-----CTT-HHHHHHHHHCS--SEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC
T ss_pred             CCCCCCCCCCCCccccHHHHhc-----CcH-HHHHHHHHcCC--eEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh
Confidence            3478999999999999998875     566 88899999999  9999988888999999999999998874 4554333


Q ss_pred             ccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHh
Q 011210          121 TSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIF  200 (491)
Q Consensus       121 ~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~  200 (491)
                      .....++|..+++..+|+.|+++|+++.+ .|++++++.+.+.+.++++++++.|.+++ ++|+.+++..++++++++++
T Consensus        82 ~~~~~~~g~~~l~~~~g~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~-~vd~~~~~~~~~~~vi~~~~  159 (444)
T 2ve3_A           82 LSTRILLGPNALATQMGEIHRSRRKILYQ-AFLPRTLDSYLPKMDGIVQGYLEQWGKAN-EVIWYPQLRRMTFDVAATLF  159 (444)
T ss_dssp             HHHHHHHCTTSGGGCCHHHHHHHHHHHHG-GGCHHHHHTTHHHHHHHHHHHHHHHHHSS-EEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCccccccCCchHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHhcCCC-cEeHHHHHHHHHHHHHHHHH
Confidence            23334446446777899999999999999 99999999999999999999999997555 89999999999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhh
Q 011210          201 LGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVED  280 (491)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~  280 (491)
                      || ..+....++.+.+..+...+.. ++..+|...+.+..++.+.+.+++.+.+++++++..    ..+|+++.+++..+
T Consensus       160 fG-~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~d~l~~ll~~~~  233 (444)
T 2ve3_A          160 MG-EKVSQNPQLFPWFETYIQGLFS-LPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPP----SEEDALGILLAARD  233 (444)
T ss_dssp             TC-HHHHSCTTHHHHHHHHHHHHSS-CCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCSSHHHHHHHCBC
T ss_pred             cC-CCcccHHHHHHHHHHHHHHHhc-CCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CccCHHHHHHhccc
Confidence            99 3211114445555555444444 455666655667777888899999999998876521    25799999998765


Q ss_pred             hcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHH
Q 011210          281 ENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVI  360 (491)
Q Consensus       281 ~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  360 (491)
                      +++..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++.+.    .. ++.+++++||||+|||
T Consensus       234 ~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~----~~-~~~~~l~~lpyl~a~i  308 (444)
T 2ve3_A          234 DNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS----QE-LTAETLKKMPYLDQVL  308 (444)
T ss_dssp             TTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCS----SC-CCHHHHTTCHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccC----CC-CChhhhhcChHHHHHH
Confidence            555579999999999999999999999999999999999999999999999988753    23 8999999999999999


Q ss_pred             HHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCC
Q 011210          361 AETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT----RPGSFIPFGGGS  436 (491)
Q Consensus       361 ~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~----~~~~~~~Fg~G~  436 (491)
                      +|+||++|+++.++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+.    .+..++|||+|+
T Consensus       309 ~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~  388 (444)
T 2ve3_A          309 QEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGL  388 (444)
T ss_dssp             HHHHHHSCSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGG
T ss_pred             HHHHhcCCCccCccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCC
Confidence            9999999999988899999999999999999999999999999999999999999999996542    345699999999


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEeccC
Q 011210          437 RICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       437 r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      |.|+|++||++|++++++.|+++|++++.++. .+.....+.+|.++++|++++|.
T Consensus       389 r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          389 RECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             GCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred             ccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence            99999999999999999999999999987543 33444567889999999999874


No 3  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=7.4e-74  Score=567.43  Aligned_cols=436  Identities=18%  Similarity=0.291  Sum_probs=354.8

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT  121 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~  121 (491)
                      +...+|||++||++||++.+......++++.++.+|+++||+  |+++++|+.++++++||+.+++++.+++.+.++...
T Consensus        22 pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~--i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~r~~~   99 (482)
T 3k9v_A           22 NVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQ--IFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEI   99 (482)
T ss_dssp             EGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHHTCCSSCCCCCC
T ss_pred             CCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCC--EEEEccCCCCEEEEcCHHHHHHHHHhcCCCCCCCCc
Confidence            345569999999999999986422234689999999999999  999999999999999999999999886544433211


Q ss_pred             ----cccccc-cccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc----CCCCeehHHHHHHHH
Q 011210          122 ----STNKLT-FRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS----LDTPIEFLTEMRKAT  192 (491)
Q Consensus       122 ----~~~~~~-g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~  192 (491)
                          ...... +..+++..+|+.|+++||.+.+.+++++.+..+.+.+.++++++++.+..    .++++|+.+++..++
T Consensus       100 ~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t  179 (482)
T 3k9v_A          100 KPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWS  179 (482)
T ss_dssp             HHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHH
T ss_pred             hHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence                111111 23577778999999999999993458888999999999999999998742    345899999999999


Q ss_pred             HHHHHHHhcCCCCch-------hhhhHHHHHHHHHhcccC--CCCC----CCCCcchHHHHHHHHHHHHHhHHHHHHHHH
Q 011210          193 FKIIANIFLGSSSDS-------VIGSVEKHYIDYAHGLIS--PFPI----NLPGFSFHKAMKARDMLGEILQPVLNERRA  259 (491)
Q Consensus       193 ~~~~~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~----~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~  259 (491)
                      +++++.++||.+.+.       ....+.+.+..+...+..  .+|.    +++...+++..+..+.+.+.+.+.++++.+
T Consensus       180 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~  259 (482)
T 3k9v_A          180 FESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQ  259 (482)
T ss_dssp             HHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998632       123344444444433221  1221    122223344556667778888888888876


Q ss_pred             chhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC
Q 011210          260 MKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP  339 (491)
Q Consensus       260 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  339 (491)
                      +...+  ...|++..+++..     .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.. 
T Consensus       260 ~~~~~--~~~d~l~~ll~~~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~-  331 (482)
T 3k9v_A          260 RYSQQ--PGADFLCDIYQQD-----HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDN-  331 (482)
T ss_dssp             HTTTC--TTSCHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTT-
T ss_pred             HhccC--CchHHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-
Confidence            44322  1467888888642     589999999999999999999999999999999999999999999999998742 


Q ss_pred             CCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCC
Q 011210          340 STQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRW  419 (491)
Q Consensus       340 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf  419 (491)
                        +. ++.+++++||||+|||+|+||++|++|.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||
T Consensus       332 --~~-~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRf  408 (482)
T 3k9v_A          332 --QT-PRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERW  408 (482)
T ss_dssp             --CC-CCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGG
T ss_pred             --CC-CCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCcccc
Confidence              33 899999999999999999999999999889999999999999999999999999999999999999999999999


Q ss_pred             CCCC--CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEecc
Q 011210          420 DNHT--TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       420 l~~~--~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      ++.+  .....++|||.|+|.|+|++||++|+++++++|+++|++++.+++ .+.....+..|..+++|++++|
T Consensus       409 l~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          409 LQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             TCTTSCCCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             CCCCCCCCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence            9865  356789999999999999999999999999999999999987553 3344455789999999999987


No 4  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=2.7e-74  Score=570.75  Aligned_cols=429  Identities=22%  Similarity=0.388  Sum_probs=340.2

Q ss_pred             CCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCC-c-cccccccccc
Q 011210           46 PPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDD-E-NFKMGYPTST  123 (491)
Q Consensus        46 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~-~-~~~~~~~~~~  123 (491)
                      ||||+++|++||++.+.+     +++.++.+|+++||+  ||++++|+.++++|+||+.+++++.++ . .+.+......
T Consensus        16 ~PGP~~~PliGn~~~~~~-----~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~   88 (485)
T 3nxu_A           16 IPGPTPLPFLGNILSYHK-----GFCMFDMECHKKYGK--VWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP   88 (485)
T ss_dssp             CCCCCCBTTTBTGGGGGG-----CHHHHHHHHHHHHCS--EEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred             CCCCCCcCeecCcHHhhc-----ChHHHHHHHHHHcCC--eEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence            599999999999998864     789999999999999  999999999999999999999999886 2 4443332222


Q ss_pred             cccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHHHHHHh
Q 011210          124 NKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKIIANIF  200 (491)
Q Consensus       124 ~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~~~~~~  200 (491)
                      ....+ .+++..+|+.|+++||++++ .|++++++.+.+.+.+.++++++.+.   ..++++|+.+++..+++++++.++
T Consensus        89 ~~~~~-~~l~~~~g~~w~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~  166 (485)
T 3nxu_A           89 VGFMK-SAISIAEDEEWKRLRSLLSP-TFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTS  166 (485)
T ss_dssp             CGGGG-GSTTTCCHHHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccc-cCccccCCcHHHHHHhhcCh-hcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHH
Confidence            22334 56777899999999999999 99999999999999999999999873   234589999999999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHhcccC------------CCCCCCCCcch----HHHHHHHHHHHHHhHHHHHHHHHchhhh
Q 011210          201 LGSSSDSVIGSVEKHYIDYAHGLIS------------PFPINLPGFSF----HKAMKARDMLGEILQPVLNERRAMKSDE  264 (491)
Q Consensus       201 fG~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~p~~~~----~~~~~~~~~l~~~~~~~i~~~~~~~~~~  264 (491)
                      ||.+.+.....-. .+.........            .+|+..+....    ....+..+.+.+.+++.++.+.+...  
T Consensus       167 fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  243 (485)
T 3nxu_A          167 FGVNIDSLNNPQD-PFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQ--  243 (485)
T ss_dssp             HSCCCCGGGCTTC-HHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred             cCCccccccCCCc-HHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhccC--
Confidence            9998765322111 11111111111            01111000000    00112333444555555554433211  


Q ss_pred             ccccccHHHHHHhhhhhc----CCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCC
Q 011210          265 QKGRKGLIDLLMEVEDEN----GTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPS  340 (491)
Q Consensus       265 ~~~~~~~~~~ll~~~~~~----~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~  340 (491)
                       ....|+++.+++..++.    +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++..  
T Consensus       244 -~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~--  320 (485)
T 3nxu_A          244 -KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK--  320 (485)
T ss_dssp             ---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTT--
T ss_pred             -CCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccC--
Confidence             12579999999875432    34689999999999999999999999999999999999999999999999998742  


Q ss_pred             CCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCC
Q 011210          341 TQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWD  420 (491)
Q Consensus       341 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl  420 (491)
                       +. ++.+++++||||+|||+|+||++|+++.++|.+++|++++|+.|||||.|+++.+++||||++|+||++|+||||+
T Consensus       321 -~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l  398 (485)
T 3nxu_A          321 -AP-PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS  398 (485)
T ss_dssp             -CC-CCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGS
T ss_pred             -CC-CCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccC
Confidence             33 8999999999999999999999999998999999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Ccc--ccccCCCCCCCeEEEeccC
Q 011210          421 NHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PAE--YLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       421 ~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~  491 (491)
                      +.+   ..+..++|||.|+|.|+|++||++|++++++.|+++|++++.++.. +..  ...+..|..+++|++++|+
T Consensus       399 ~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  475 (485)
T 3nxu_A          399 KKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRD  475 (485)
T ss_dssp             HHHHTTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC-
T ss_pred             CCccccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEcc
Confidence            643   3567899999999999999999999999999999999999876532 222  2346889999999999884


No 5  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=4.7e-73  Score=564.44  Aligned_cols=434  Identities=18%  Similarity=0.263  Sum_probs=349.2

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccccc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTS  122 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~  122 (491)
                      .+.||||++||++||++++.+... .+.+..+.+|+++||+  ||++++|+.++++++||+.++++++++ .+.++....
T Consensus        44 ~~~pPGP~~~P~iGnl~~~~~~~~-~~~~~~~~~~~~~yG~--v~~~~~g~~~~vvv~~p~~~~~il~~~-~~~~r~~~~  119 (503)
T 3s79_A           44 TSSIPGPGYCMGIGPLISHGRFLW-MGIGSACNYYNRVYGE--FMRVWISGEETLIISKSSSMFHIMKHN-HYSSRFGSK  119 (503)
T ss_dssp             -CCCCSCCCCSSSHHHHHHHHHHH-HCHHHHHHHHHHHSCS--EEEEESSSSEEEEECCHHHHHHHHHSG-GGCCCCCCH
T ss_pred             cCCCCCCCCCceeeehhccccccc-cchhHHHHHHHHHhCC--eEEEEeCCccEEEECCHHHHHHHHhcC-CCCCcchhh
Confidence            368899999999999998864221 2466789999999999  999999999999999999999999764 333332211


Q ss_pred             -cc---ccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHH
Q 011210          123 -TN---KLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKI  195 (491)
Q Consensus       123 -~~---~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~  195 (491)
                       ..   ...|...++..+|+.|+++||++.+ .|+..++..+.+.+.+++.++++.+.   +.++++|+.+++..+++++
T Consensus       120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~-~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~v  198 (503)
T 3s79_A          120 LGLQCIGMHEKGIIFNNNPELWKTTRPFFMK-ALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDT  198 (503)
T ss_dssp             HHHHHHTCTTSSSTTCCCHHHHHHHHHHHHH-HTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHH
T ss_pred             hhhhhhccCCCceeeCCCccHHHHHHHhhhH-hhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHH
Confidence             11   1223233445679999999999999 89999999999999999999999874   2344899999999999999


Q ss_pred             HHHHhcCCCCchh--hhhHHHHHHHHHhcccCC-CCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhcc--cccc
Q 011210          196 IANIFLGSSSDSV--IGSVEKHYIDYAHGLISP-FPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQK--GRKG  270 (491)
Q Consensus       196 ~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~--~~~~  270 (491)
                      +++++||.+.++.  ...+.+.+..+....... +...++ ....+..++.+.+.+++.+.++++++..+.+..  ...|
T Consensus       199 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d  277 (503)
T 3s79_A          199 SNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKIS-WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMD  277 (503)
T ss_dssp             HHHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHHHHHSG-GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCC
T ss_pred             HHHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence            9999999987532  122222222222211110 000122 123566778888999999999988876543321  1359


Q ss_pred             HHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 011210          271 LIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEI  350 (491)
Q Consensus       271 ~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l  350 (491)
                      +++.+++..++  ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++++++    +. ++.+++
T Consensus       278 ~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~----~~-~~~~~~  350 (503)
T 3s79_A          278 FATELILAEKR--GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE----RD-IKIDDI  350 (503)
T ss_dssp             HHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTT----SC-CCHHHH
T ss_pred             HHHHHHHhccc--CCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CC-CCHHHH
Confidence            99999987543  368999999999999999999999999999999999999999999999999872    23 899999


Q ss_pred             hccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 011210          351 KQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFI  430 (491)
Q Consensus       351 ~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~  430 (491)
                      ++||||+|||+|++|++|+++...|.+++|++++||.|||||.|+++.+++||| ++|+||++|+||||++. .....++
T Consensus       351 ~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~-~~~~~~~  428 (503)
T 3s79_A          351 QKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKN-VPYRYFQ  428 (503)
T ss_dssp             TTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSC-CCTTTCC
T ss_pred             hcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCC-CCccccc
Confidence            999999999999999999999888999999999999999999999999999999 99999999999999975 3456899


Q ss_pred             cccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC--Cc--cccccCCCCCC---CeEEEeccC
Q 011210          431 PFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC--PA--EYLPVPRPSDQ---CLAKVVGFK  491 (491)
Q Consensus       431 ~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~---~~~~~~~~~  491 (491)
                      |||+|+|.|+|++||++|++++++.|+++|+|++.++..  +.  ....+.+|..+   ++|+|++|+
T Consensus       429 pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~  496 (503)
T 3s79_A          429 PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRN  496 (503)
T ss_dssp             SSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCC
Confidence            999999999999999999999999999999999876532  22  22335666665   999999985


No 6  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=2.3e-73  Score=563.52  Aligned_cols=440  Identities=19%  Similarity=0.303  Sum_probs=331.9

Q ss_pred             CCCcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccc
Q 011210           39 GEMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKM  117 (491)
Q Consensus        39 ~~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~  117 (491)
                      .+++.++||||++||++||++++..    ++++..+.+|+++||+  ||++++|+.++|+|+||++++++|.+++ .+.+
T Consensus         5 ~ss~~kLPPGP~~lP~iGn~~~~~~----~~~~~~~~~~~~kYG~--i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~   78 (479)
T 3tbg_A            5 TSSKGKLPPGPLPLPGLGNLLHVDF----QNTPYCFDQLRRRFGD--VFSLQLAWTPVVVLNGLAAVREALVTHGEDTAD   78 (479)
T ss_dssp             ----CCCCCCSCCBTTTBTGGGCCT----TSHHHHHHHHHHHHCS--EEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCB
T ss_pred             CCCCCCCCCCCCCcCcccchHhhcC----CCHHHHHHHHHHHhCC--EEEEEECCeeEEEECCHHHHHHHHHhCChhhcC
Confidence            3445579999999999999998863    5789999999999999  9999999999999999999999998765 4544


Q ss_pred             cccccccccc-----cccceeeccchhHHHHHHhhhccCcChhhhHH--HHHHHHHHHHHHHhhhh-cCCCCeehHHHHH
Q 011210          118 GYPTSTNKLT-----FRGSFITASKEGQKRIRKLATSPLKGHKAIVV--YIDNIEEIVIKSLKGWA-SLDTPIEFLTEMR  189 (491)
Q Consensus       118 ~~~~~~~~~~-----g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~-~~~~~vdl~~~~~  189 (491)
                      +.........     +...++..+|+.|+++|+.+.+ .|+...+..  +.+.+......+...+. ..++.+|+...+.
T Consensus        79 r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  157 (479)
T 3tbg_A           79 RPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVS-TLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLD  157 (479)
T ss_dssp             CCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHH-HHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHH
T ss_pred             CCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHH-HhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHH
Confidence            3332222222     2223445579999999999988 666555432  34444545555544442 3344899999999


Q ss_pred             HHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhc---ccC-------CCCCCCCCc-chHHHHHHHHHHHHHhHHHHHHHH
Q 011210          190 KATFKIIANIFLGSSSDSVIGSVEKHYIDYAHG---LIS-------PFPINLPGF-SFHKAMKARDMLGEILQPVLNERR  258 (491)
Q Consensus       190 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~  258 (491)
                      .++.++++.++||..++................   ...       ..+...... ...+.....+...+.+.+.++...
T Consensus       158 ~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (479)
T 3tbg_A          158 KAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHR  237 (479)
T ss_dssp             HHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998765443333222222111   110       011111111 122344455666667777776666


Q ss_pred             HchhhhccccccHHHHHHhhh----hhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 011210          259 AMKSDEQKGRKGLIDLLMEVE----DENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDI  334 (491)
Q Consensus       259 ~~~~~~~~~~~~~~~~ll~~~----~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  334 (491)
                      +....... ..|+++.+....    .+.+..++++++.+++..+++||+|||+++++|++++|++||++|+|||+|++++
T Consensus       238 ~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~  316 (479)
T 3tbg_A          238 MTWDPAQP-PRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDV  316 (479)
T ss_dssp             HHCCTTSC-CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             Hhhhcccc-cchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            54433222 455555554332    2344579999999999999999999999999999999999999999999999998


Q ss_pred             HhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcc-eeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCC
Q 011210          335 IKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSF-REAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQ  413 (491)
Q Consensus       335 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  413 (491)
                      ++.   ++. ++.+++++||||+|||+|+||++|++|... |.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       317 ~~~---~~~-~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~  392 (479)
T 3tbg_A          317 IGQ---VRR-PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFR  392 (479)
T ss_dssp             TCS---SSC-CCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTS
T ss_pred             Hhh---ccc-cchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccc
Confidence            863   233 899999999999999999999999999754 567799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcccc----ccCCCCCCCeEE
Q 011210          414 FDPSRWDNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYL----PVPRPSDQCLAK  486 (491)
Q Consensus       414 F~PeRfl~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~----~~~~~~~~~~~~  486 (491)
                      |+||||++.+   .++..|+|||+|+|.|+|++||++|+++++|.|+++|||++.++.......    .+..| .+++|+
T Consensus       393 F~PeRfl~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P-~~~~v~  471 (479)
T 3tbg_A          393 FHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSP-SPYELC  471 (479)
T ss_dssp             CCGGGGBCTTCCBCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEE-CCCCBE
T ss_pred             cCccccCCCCcccCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecC-CCeEEE
Confidence            9999999865   356789999999999999999999999999999999999998764332222    24455 589999


Q ss_pred             EeccC
Q 011210          487 VVGFK  491 (491)
Q Consensus       487 ~~~~~  491 (491)
                      +++|+
T Consensus       472 ~~pRs  476 (479)
T 3tbg_A          472 AVPRH  476 (479)
T ss_dssp             EEEC-
T ss_pred             EEECC
Confidence            99985


No 7  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=9.5e-73  Score=558.47  Aligned_cols=436  Identities=22%  Similarity=0.313  Sum_probs=350.0

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      ++.++||||+++|++||++++.    .++++.++.+|+++||+  ||++++++.++++++||+.+++++.++. .+.++.
T Consensus         7 ~~~~lpPgP~~~PliG~~~~~~----~~~~~~~~~~~~~~yG~--v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~   80 (476)
T 3e6i_A            7 SKGKLPPGPFPLPIIGNLFQLE----LKNIPKSFTRLAQRFGP--VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRG   80 (476)
T ss_dssp             ---CCCCCCCCBTTTBTGGGCC----TTCHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEEC
T ss_pred             CCCCCCcCCCCcccccChhhhc----cccHhHHHHHHHHHhCC--EEEEEECCccEEEECCHHHHHHHHhcchHhhCCCC
Confidence            3558899999999999999874    25889999999999999  9999999999999999999999998864 444332


Q ss_pred             c-ccccccccccceeeccchhHHHHHHhhhccCcChhhh--HHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHHHH
Q 011210          120 P-TSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAI--VVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATFKI  195 (491)
Q Consensus       120 ~-~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~~~  195 (491)
                      . .....+.+. +++..+|+.|+++||+..+ .++...+  ..+.+.+.++++++++.+.. .++++|+..++..+++++
T Consensus        81 ~~~~~~~~~~~-~l~~~~g~~w~~~Rr~~~~-~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dv  158 (476)
T 3e6i_A           81 DLPAFHAHRDR-GIIFNNGPTWKDIRRFSLT-TLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNV  158 (476)
T ss_dssp             CCGGGGGGTTS-SSTTCCSTTHHHHHHHHHH-HHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHH
T ss_pred             CCchhheecCC-CEEecCCcHHHHHHHHHHH-HHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHH
Confidence            2 223334443 7778899999999998887 6554433  44678888999999998853 345899999999999999


Q ss_pred             HHHHhcCCCCchhhhhHHH---HHHHHHhccc-------CCCC---CCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchh
Q 011210          196 IANIFLGSSSDSVIGSVEK---HYIDYAHGLI-------SPFP---INLPGFSFHKAMKARDMLGEILQPVLNERRAMKS  262 (491)
Q Consensus       196 ~~~~~fG~~~~~~~~~~~~---~~~~~~~~~~-------~~~~---~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (491)
                      +++++||.+.+.....+..   .+........       ..+|   .++|. ...+..+..+.+.+++.+.++++++..+
T Consensus       159 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (476)
T 3e6i_A          159 IADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERVKEHHQSLD  237 (476)
T ss_dssp             HHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999987654333222   2222211111       0122   13342 3456677788889999999988887543


Q ss_pred             hhccccccHHHHHHhhhhhc----CCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcC
Q 011210          263 DEQKGRKGLIDLLMEVEDEN----GTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKR  338 (491)
Q Consensus       263 ~~~~~~~~~~~~ll~~~~~~----~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~  338 (491)
                      .+.  ..|+++.++...+++    +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++. 
T Consensus       238 ~~~--~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~-  314 (476)
T 3e6i_A          238 PNC--PRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGP-  314 (476)
T ss_dssp             TTS--CCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTT-
T ss_pred             CCC--CccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCC-
Confidence            322  468999998765432    3358999999999999999999999999999999999999999999999999873 


Q ss_pred             CCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCC
Q 011210          339 PSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPS  417 (491)
Q Consensus       339 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~Pe  417 (491)
                        +.. ++.+++++||||+|||+|+||++|+++. ++|.+.+|++++|+.|||||.|+++.+++||||++|+||++|+||
T Consensus       315 --~~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~Pe  391 (476)
T 3e6i_A          315 --SRI-PAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPE  391 (476)
T ss_dssp             --TSC-CCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGG
T ss_pred             --CCC-CChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCch
Confidence              233 8999999999999999999999999994 889999999999999999999999999999999999999999999


Q ss_pred             CCCCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcccc----ccCCCCCCCeEEEecc
Q 011210          418 RWDNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYL----PVPRPSDQCLAKVVGF  490 (491)
Q Consensus       418 Rfl~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  490 (491)
                      ||++.+   .....++|||.|+|.|+|++||++|++++++.|+++|++++..++.+....    .....+.+++|+|++|
T Consensus       392 R~l~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R  471 (476)
T 3e6i_A          392 HFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPR  471 (476)
T ss_dssp             GGBCTTSSBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECCCCCEEEEEC
T ss_pred             hhcCCCCCccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCCCeEEEEEec
Confidence            999765   356789999999999999999999999999999999999975443333322    2334456899999998


Q ss_pred             C
Q 011210          491 K  491 (491)
Q Consensus       491 ~  491 (491)
                      +
T Consensus       472 ~  472 (476)
T 3e6i_A          472 S  472 (476)
T ss_dssp             C
T ss_pred             c
Confidence            5


No 8  
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=7.5e-73  Score=554.46  Aligned_cols=431  Identities=21%  Similarity=0.340  Sum_probs=336.7

Q ss_pred             CCCCC-CCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc-c
Q 011210           44 SLPPG-DMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY-P  120 (491)
Q Consensus        44 ~~pPg-p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~-~  120 (491)
                      ++||| |+++|++||++.+.     .+++.++.+++++||+  ||++++++.++++|+||+.+++++.+++ .+.... .
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~-----~~~~~~~~~l~~~yG~--v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~   76 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFR-----TDPIGLMQRVRDELGD--VGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY   76 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHT-----TCHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSC
T ss_pred             CCCCCCCCCCCCccCHHHHh-----hChHHHHHHHHHHcCC--EEEEEeCCceEEEECCHHHHHHHHhcCccccCcccch
Confidence            67898 88999999998875     3789999999999999  9999999889999999999999998753 444322 1


Q ss_pred             ccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHh
Q 011210          121 TSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIF  200 (491)
Q Consensus       121 ~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~  200 (491)
                      .....++| .++ ..+++.|+++|+++.+ .|++++++.+.+.+.++++++++.+..++ ++|+.+++..++++++++++
T Consensus        77 ~~~~~~~g-~~~-~~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~~~~~~-~vd~~~~~~~~~~~vi~~~~  152 (455)
T 2cib_A           77 PFMTPIFG-EGV-VFDASPERRKEMLHNA-ALRGEQMKGHAATIEDQVRRMIADWGEAG-EIDLLDFFAELTIYTSSACL  152 (455)
T ss_dssp             GGGHHHHC-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEE-EEEHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhhcC-Ccc-ccCcHHHHHHHhhhcc-ccCHHHHHHHHHHHHHHHHHHHHHhCCCC-cEeHHHHHHHHHHHHHHHHH
Confidence            22222334 234 3579999999999999 99999999999999999999999986555 89999999999999999999


Q ss_pred             cCCCCchh-hhhHHHHHHHHHhcccC---CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHH
Q 011210          201 LGSSSDSV-IGSVEKHYIDYAHGLIS---PFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLM  276 (491)
Q Consensus       201 fG~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll  276 (491)
                      ||.+.+.. ...+.+.+..+...+..   .+| +++...+++..++.+.+.+++.+.|++++++..... .+.|+++.++
T Consensus       153 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-~~~dll~~ll  230 (455)
T 2cib_A          153 IGKKFRDQLDGRFAKLYHELERGTDPLAYVDP-YLPIESFRRRDEARNGLVALVADIMNGRIANPPTDK-SDRDMLDVLI  230 (455)
T ss_dssp             TCHHHHTTCCHHHHHHHHHHHTTCCGGGGTCT-TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCHHHHHH
T ss_pred             cCCCcchhhhHHHHHHHHHHHhhhhHHHHhcc-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CcccHHHHHH
Confidence            99875432 23444455444332211   123 344444456667788899999999998876543211 1239999999


Q ss_pred             hhhhhcCCC-CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHH
Q 011210          277 EVEDENGTK-LDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEY  355 (491)
Q Consensus       277 ~~~~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~  355 (491)
                      +..++++.. ++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++++.+   .. ++.+++++|||
T Consensus       231 ~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~---~~-~~~~~l~~lpy  306 (455)
T 2cib_A          231 AVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG---RS-VSFHALRQIPQ  306 (455)
T ss_dssp             HCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGC---CC-HHHHTTSCCHH
T ss_pred             HhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC---CC-CCHHHHhcCHH
Confidence            876544545 89999999999999999999999999999999999999999999999998743   23 88999999999


Q ss_pred             HHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC----CCCCccc
Q 011210          356 LAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT----RPGSFIP  431 (491)
Q Consensus       356 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~----~~~~~~~  431 (491)
                      |+|||+|+||++|+++.++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+.    .+..++|
T Consensus       307 l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lp  386 (455)
T 2cib_A          307 LENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIP  386 (455)
T ss_dssp             HHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCT
T ss_pred             HHHHHHHHHhcCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccC
Confidence            999999999999999888999999999999999999999999999999999999999999999997542    2567999


Q ss_pred             ccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcc---ccccCCCCCCCeEEEeccC
Q 011210          432 FGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAE---YLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       432 Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  491 (491)
                      ||.|+|.|+|++||++|++++++.|+++|++++..++..+.   ...+..|..+++|++++|+
T Consensus       387 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R~  449 (455)
T 2cib_A          387 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRT  449 (455)
T ss_dssp             TCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC-
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEECc
Confidence            99999999999999999999999999999999874332221   1235667789999999884


No 9  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=2.1e-72  Score=558.18  Aligned_cols=438  Identities=21%  Similarity=0.290  Sum_probs=344.2

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      ..++||||++||++||++++.+   .++++..+.+|+++||+  ||++++|+.++++|+||+.+++++.++. .|.++..
T Consensus         6 ~~~~PPgP~~lPliGnl~~l~~---~~~~~~~~~~~~~kYG~--i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~   80 (494)
T 3swz_A            6 GAKYPKSLLSLPLVGSLPFLPR---HGHMHNNFFKLQKKYGP--IYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQ   80 (494)
T ss_dssp             ------CCBCCCEEEEESSCTT---SSCHHHHHHHTHHHHCS--EEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCC
T ss_pred             CCCCCCCCCCCCeEcchHHhCC---CCchhHHHHHHHHHcCC--EEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCC
Confidence            4578999999999999988753   34688999999999999  9999999999999999999999998875 5544332


Q ss_pred             cccccccc--ccceeec-cchhHHHHHHhhhccCcCh--hhhHHHHHHHHHHHHHHHhhhh-cCCCCeehHHHHHHHHHH
Q 011210          121 TSTNKLTF--RGSFITA-SKEGQKRIRKLATSPLKGH--KAIVVYIDNIEEIVIKSLKGWA-SLDTPIEFLTEMRKATFK  194 (491)
Q Consensus       121 ~~~~~~~g--~~~l~~~-~g~~~~~~Rr~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~-~~~~~vdl~~~~~~~~~~  194 (491)
                      ......++  ..++++. +|+.|+++||++.+ .|+.  ..+..+.+.+.++++.+++.+. ..++++|+...+..++++
T Consensus        81 ~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~d  159 (494)
T 3swz_A           81 MATLDIASNNRKGIAFADSGAHWQLHRRLAMA-TFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTN  159 (494)
T ss_dssp             CHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHH-HTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHH
T ss_pred             cHHHHHhccCCCCeEeCCCCHHHHHHHHHHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHH
Confidence            22222222  2455555 59999999999998 7763  4567789999999999998874 344589999999999999


Q ss_pred             HHHHHhcCCCCchhhhh---HHHHHHHHHhc-----ccCCCCC--CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhh
Q 011210          195 IIANIFLGSSSDSVIGS---VEKHYIDYAHG-----LISPFPI--NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDE  264 (491)
Q Consensus       195 ~~~~~~fG~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  264 (491)
                      +++.++||.+.+...+.   +......+...     +..++|+  ++|....++..+..+.+.++++..++++++....+
T Consensus       160 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  239 (494)
T 3swz_A          160 VISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSD  239 (494)
T ss_dssp             HHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             HHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999999986543222   11111111111     1222333  34443445566667777788888888776543322


Q ss_pred             ccccccHHHHHHhhhhh----------cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 011210          265 QKGRKGLIDLLMEVEDE----------NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDI  334 (491)
Q Consensus       265 ~~~~~~~~~~ll~~~~~----------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~  334 (491)
                        ...|+++.+++...+          ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       240 --~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v  317 (494)
T 3swz_A          240 --SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQN  317 (494)
T ss_dssp             --CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             --chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence              156999999986532          12348899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCC
Q 011210          335 IKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQ  413 (491)
Q Consensus       335 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  413 (491)
                      ++.   ++. ++.+++++||||+|||+|+||++|++|. ++|.+++|++++||.|||||.|+++.+++||||++|+||++
T Consensus       318 ~~~---~~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  393 (494)
T 3swz_A          318 VGF---SRT-PTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQ  393 (494)
T ss_dssp             TCS---SSC-CCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTS
T ss_pred             cCC---CCC-CCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCccc
Confidence            874   233 8999999999999999999999999996 78999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-----CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcccc---ccCCCCCCCeE
Q 011210          414 FDPSRWDNHTT-----RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYL---PVPRPSDQCLA  485 (491)
Q Consensus       414 F~PeRfl~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~---~~~~~~~~~~~  485 (491)
                      |+||||++.+.     ....++|||.|+|.|+|++||++|++++++.|+++|+|++.++.......   .....+.+++|
T Consensus       394 F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v  473 (494)
T 3swz_A          394 FMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKV  473 (494)
T ss_dssp             CCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEECCCCCE
T ss_pred             CCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecCCCcEE
Confidence            99999997542     34689999999999999999999999999999999999987643222222   13334578999


Q ss_pred             EEeccC
Q 011210          486 KVVGFK  491 (491)
Q Consensus       486 ~~~~~~  491 (491)
                      ++++|+
T Consensus       474 ~~~~R~  479 (494)
T 3swz_A          474 KIKVRQ  479 (494)
T ss_dssp             EEEECH
T ss_pred             EEEEcC
Confidence            999873


No 10 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=4.6e-72  Score=552.62  Aligned_cols=433  Identities=19%  Similarity=0.322  Sum_probs=348.1

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCC-ccccccccc-
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDD-ENFKMGYPT-  121 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~-~~~~~~~~~-  121 (491)
                      ++||||+++|++||++.+.    .++++.++.+++++||+  |+++++++.++++++||+.+++++.++ +.|.++... 
T Consensus        10 ~~pPgP~~~p~iG~~~~~~----~~~~~~~~~~l~~~yG~--v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~   83 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQMD----RKGLLRSFLRLREKYGD--VFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA   83 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGCC----TTCHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG
T ss_pred             CCCcCCCCCCccccHHhcc----CCcHHHHHHHHHHHhCC--EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence            6789999999999998873    35889999999999999  999999888999999999999999664 355442211 


Q ss_pred             cccccccccceeeccchhHHHHHHhhhccCcChh--hhHHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHHHHHHH
Q 011210          122 STNKLTFRGSFITASKEGQKRIRKLATSPLKGHK--AIVVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       122 ~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~~~~~~  198 (491)
                      ......+..+++..+|+.|+++||++.+ .|++.  .++.+.+.+.++++++++.+.. .++++|+.+.+..++++++++
T Consensus        84 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~  162 (476)
T 1po5_A           84 VVDPIFQGYGVIFANGERWRALRRFSLA-TMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICS  162 (476)
T ss_dssp             GGCSCCSSCCCCCSSHHHHHHHHHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCCceEecCCcHHHHHHHHHHH-HHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence            1222223356777899999999999988 77776  4577899999999999999853 344899999999999999999


Q ss_pred             HhcCCCCchhhhhHHHH---HHHHHhcccC-------CCCC---CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc
Q 011210          199 IFLGSSSDSVIGSVEKH---YIDYAHGLIS-------PFPI---NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ  265 (491)
Q Consensus       199 ~~fG~~~~~~~~~~~~~---~~~~~~~~~~-------~~~~---~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (491)
                      ++||.+.+.....+...   +.........       .+|+   ++|. ...+..++.+.+.+++.+.|+++++....+ 
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  240 (476)
T 1po5_A          163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPG-THRQIYRNLQEINTFIGQSVEKHRATLDPS-  240 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSC-SHHHHHHHHHHHHHHHHHHHHHHHTTCCTT-
T ss_pred             HHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence            99999765332223222   2222211110       1221   2333 234566777888999999999887643221 


Q ss_pred             cccccHHHHHHhhhhh----cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC
Q 011210          266 KGRKGLIDLLMEVEDE----NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST  341 (491)
Q Consensus       266 ~~~~~~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  341 (491)
                       ...|+++.+++..++    .+..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++++.   +
T Consensus       241 -~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~  316 (476)
T 1po5_A          241 -NPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS---H  316 (476)
T ss_dssp             -SCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS---S
T ss_pred             -CcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---C
Confidence             146899999865432    12347899999999999999999999999999999999999999999999999873   2


Q ss_pred             CCCCCHHHHhccHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCC
Q 011210          342 QKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWD  420 (491)
Q Consensus       342 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl  420 (491)
                      +. ++.+++++||||+|||+|+||++|+++ +++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       317 ~~-~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l  395 (476)
T 1po5_A          317 RP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL  395 (476)
T ss_dssp             SC-CCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGB
T ss_pred             CC-CChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhC
Confidence            33 889999999999999999999999999 5899999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC--Cc---cccccCCCCCCCeEEEeccC
Q 011210          421 NHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC--PA---EYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       421 ~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~  491 (491)
                      +.+   .....++|||.|+|.|+|++||++|++++++.|+++|++++.++..  ..   ....+..| .+++|++++|+
T Consensus       396 ~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 1po5_A          396 DANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLARH  473 (476)
T ss_dssp             CTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEEECC
T ss_pred             CCCCCccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEEecC
Confidence            754   2356899999999999999999999999999999999999876532  12   22234566 78999999885


No 11 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=3.7e-72  Score=550.35  Aligned_cols=430  Identities=21%  Similarity=0.351  Sum_probs=357.5

Q ss_pred             CCCCCCCC-CccccccHHHHhhhhcCCchHHHHHHHHHcC-CcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc
Q 011210           44 SLPPGDMG-WPLVGNMLSHQKAFKSSEPQSFIYNLFERYG-RKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP  120 (491)
Q Consensus        44 ~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~  120 (491)
                      ++||||++ +|++||++++..     +++.++.+|+++|| +  ||++++++.++++++||+.+++++.+++ .+.++..
T Consensus         3 ~~PPg~p~~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~~--i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~   75 (450)
T 3gw9_A            3 KLPPVYPVTVPILGHIIQFGK-----SPLGFMQECKRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREV   75 (450)
T ss_dssp             SCCCBCCCCSTTTBTHHHHHH-----CHHHHHHHHHHHHTCS--EEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGG
T ss_pred             CCCCCCCCCcchhccHHHHcc-----CHHHHHHHHHHHhCCC--eEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhh
Confidence            67899666 999999999875     79999999999999 8  9999999999999999999999998865 4443322


Q ss_pred             -ccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHh-hhhcCCCCeehHHHHHHHHHHHHHH
Q 011210          121 -TSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLK-GWASLDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       121 -~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~vdl~~~~~~~~~~~~~~  198 (491)
                       .....++|...++..+++.|+++|+++.+ .|+.++++.+.+.+.++++++++ .+...++++|+.+++..++++++++
T Consensus        76 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~  154 (450)
T 3gw9_A           76 YSFMVPVFGEGVAYAAPYPRMREQLNFLAE-ELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQ  154 (450)
T ss_dssp             GGGGHHHHCTTSGGGSCHHHHHHHHHHHHH-TTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCcccCCCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHH
Confidence             22334456444444589999999999999 99999999999999999999999 7763444899999999999999999


Q ss_pred             HhcCCCCchh--hhhHHHHHHHHHhcccC---CCCC--CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccH
Q 011210          199 IFLGSSSDSV--IGSVEKHYIDYAHGLIS---PFPI--NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGL  271 (491)
Q Consensus       199 ~~fG~~~~~~--~~~~~~~~~~~~~~~~~---~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  271 (491)
                      ++||.+.+..  ...+.+.+..+......   .+|+  ++|.....+..++.+.+.+++.+.++++++..........|+
T Consensus       155 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~  234 (450)
T 3gw9_A          155 CLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDL  234 (450)
T ss_dssp             HHSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSH
T ss_pred             HHcCcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchH
Confidence            9999875432  23444444444332211   2332  345444556778888999999999988876432222236899


Q ss_pred             HHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHh--hCchHHHHHHHHHHHHHhcCCCCCCCCCHHH
Q 011210          272 IDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLH--KHPQTLRKAKEEQEDIIKKRPSTQKGLTIEE  349 (491)
Q Consensus       272 ~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~  349 (491)
                      ++.+++..++++..++++++.+++..+++||+|||+++++|++++|+  .||++|+++++|++++      +.. ++.++
T Consensus       235 l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~------~~~-~~~~~  307 (450)
T 3gw9_A          235 LSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF------PAQ-LNYNN  307 (450)
T ss_dssp             HHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC------CSS-CCHHH
T ss_pred             HHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc------cCC-CChHH
Confidence            99999887666667999999999999999999999999999999999  9999999999999876      123 89999


Q ss_pred             H-hccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 011210          350 I-KQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGS  428 (491)
Q Consensus       350 l-~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~  428 (491)
                      + ++||||+|||+|+||++|+++.++|.+.+|++++|+.|||||.|+++.+++||||++|+||++|+|||+.   ..+..
T Consensus       308 ~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~---~~~~~  384 (450)
T 3gw9_A          308 VMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE---KVEGA  384 (450)
T ss_dssp             HHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC---SSTTC
T ss_pred             HHHhcHHHHHHHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc---CCCCc
Confidence            9 9999999999999999999998899999999999999999999999999999999999999999999932   23678


Q ss_pred             cccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCcccc-ccCCCC-CCCeEEEeccC
Q 011210          429 FIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYL-PVPRPS-DQCLAKVVGFK  491 (491)
Q Consensus       429 ~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~~~  491 (491)
                      ++|||+|+|.|+|++||++|++++++.|+++|++++.+++ .+..+. .+..|. .+++|+|++|+
T Consensus       385 ~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          385 FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             CCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEECC
T ss_pred             eeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeecC
Confidence            9999999999999999999999999999999999997543 333333 357777 89999999986


No 12 
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=2.9e-72  Score=554.05  Aligned_cols=433  Identities=20%  Similarity=0.330  Sum_probs=349.9

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCC-cccccccccc
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDD-ENFKMGYPTS  122 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~-~~~~~~~~~~  122 (491)
                      ++||||+++|++||++.+.    .++++.++.+++++||+  |+++++++.++++++||+.+++++.++ ..|.+.....
T Consensus        10 ~~pPgP~~~p~iG~~~~~~----~~~~~~~~~~l~~~yG~--v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~   83 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLN----TEQMYNSLMKISERYGP--VFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQA   83 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCC----TTBHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCH
T ss_pred             CCCCCCCCCcccccHhhcC----CcchHHHHHHHHHHhCC--EEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcH
Confidence            6789999999999998873    25789999999999999  999999988999999999999999664 3454322211


Q ss_pred             -ccccccccceeeccchhHHHHHHhhhccCcChhhh--HHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHHHHHHH
Q 011210          123 -TNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAI--VVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       123 -~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~~~~~~  198 (491)
                       .....+..+++..+|+.|+++||++.+ .|++..+  +.+.+.+.++++++++.+.. .++++|+.+++..++++++++
T Consensus        84 ~~~~~~~~~~l~~~~g~~~~~~Rr~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~  162 (476)
T 2fdv_A           84 TFDWVFKGYGVVFSNGERAKQLRRFSIA-TLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISS  162 (476)
T ss_dssp             HHHHHHTTCSSSSCCHHHHHHHHHHHHH-HHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHhhhcCCCCeEecCchHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence             112223356777899999999999999 8887766  78999999999999999853 344899999999999999999


Q ss_pred             HhcCCCCchhh---hhHHHHHHHHHhcc-------cCCCCC---CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc
Q 011210          199 IFLGSSSDSVI---GSVEKHYIDYAHGL-------ISPFPI---NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ  265 (491)
Q Consensus       199 ~~fG~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~---~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (491)
                      ++||.+.+...   ..+.+.+..+....       ...+|+   ++|. ...+..++.+.+.+++.+.++++++..+.+ 
T Consensus       163 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  240 (476)
T 2fdv_A          163 IVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKVEHNQRTLDPN-  240 (476)
T ss_dssp             HHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHHTTCCTT-
T ss_pred             HHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence            99999865322   22222222222110       111222   3342 335566778888999999999887643221 


Q ss_pred             cccccHHHHHHhhhhh----cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC
Q 011210          266 KGRKGLIDLLMEVEDE----NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST  341 (491)
Q Consensus       266 ~~~~~~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  341 (491)
                       ...|+++.+++..++    .+..++++++.+++..+++||+|||+++++|++++|++||++|+|||+|++++++.   +
T Consensus       241 -~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~---~  316 (476)
T 2fdv_A          241 -SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK---N  316 (476)
T ss_dssp             -SCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS---S
T ss_pred             -CCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC---C
Confidence             146999999986533    23468999999999999999999999999999999999999999999999999874   2


Q ss_pred             CCCCCHHHHhccHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCC
Q 011210          342 QKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWD  420 (491)
Q Consensus       342 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl  420 (491)
                      .. ++.+++++||||+|||+|+||++|+++ +++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       317 ~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l  395 (476)
T 2fdv_A          317 RQ-PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL  395 (476)
T ss_dssp             SC-CCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGB
T ss_pred             CC-CChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhC
Confidence            33 889999999999999999999999999 6899999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC--Cc---cccccCCCCCCCeEEEeccC
Q 011210          421 NHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC--PA---EYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       421 ~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~  491 (491)
                      +.+   .....++|||.|+|.|+|++||++|++++++.|+++|++++.++..  ..   ....+..| .+++|++++|+
T Consensus       396 ~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 2fdv_A          396 NEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFLPRH  473 (476)
T ss_dssp             CTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEEEC-
T ss_pred             CCCCCCCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEEecc
Confidence            754   2356899999999999999999999999999999999999876532  12   22335666 78999999884


No 13 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=5.7e-72  Score=552.33  Aligned_cols=433  Identities=21%  Similarity=0.310  Sum_probs=340.9

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCC-ccccccccc-
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDD-ENFKMGYPT-  121 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~-~~~~~~~~~-  121 (491)
                      +.||||+++|++||++.+..    ++++..+.+++++||+  |+++++++.++++++||+.+++++.++ +.+.+.... 
T Consensus        11 ~~pPgP~~~p~iG~~~~~~~----~~~~~~~~~l~~~yG~--v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~   84 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIGI----KDISKSLTNLSKVYGP--VFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFP   84 (477)
T ss_dssp             BCCCCSSSCC-----CCBCH----HHHHHHHHHHHHHHCS--EEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCS
T ss_pred             CCCCCCCCCceeccHhhcCC----CChHHHHHHHHHHhCC--EEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcch
Confidence            57899999999999987732    4688999999999999  999999888999999999999999664 345442211 


Q ss_pred             cccccccccceeeccchhHHHHHHhhhccCcChh--hhHHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHHHHHHH
Q 011210          122 STNKLTFRGSFITASKEGQKRIRKLATSPLKGHK--AIVVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATFKIIAN  198 (491)
Q Consensus       122 ~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~~~~~~  198 (491)
                      ......+..+++..+|+.|+++||++.+ .|++.  .++.+.+.+.++++++++.+.. .++++|+.+.+..++++++++
T Consensus        85 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~-~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~  163 (477)
T 1r9o_A           85 LAERANRGFGIVFSNGKKWKEIRRFSLM-TLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICS  163 (477)
T ss_dssp             CCCTTTCTTSSTTCCHHHHHHHHHHHHH-HHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHH
T ss_pred             hhhhccCCCceEecCChHHHHHHHHHHH-HHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence            1222223356777799999999999988 77776  4567899999999999999853 334899999999999999999


Q ss_pred             HhcCCCCchhhhh---HHHHHHHHHhc---c----cCCCCC---CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc
Q 011210          199 IFLGSSSDSVIGS---VEKHYIDYAHG---L----ISPFPI---NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ  265 (491)
Q Consensus       199 ~~fG~~~~~~~~~---~~~~~~~~~~~---~----~~~~~~---~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (491)
                      ++||.+.+.....   +.+.+......   .    ...+|+   ++|. ...+..++.+.+.+++.+.++++++....+ 
T Consensus       164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-  241 (477)
T 1r9o_A          164 IIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPG-THNKLLKNVAFMKSYILEKVKEHQESMDMN-  241 (477)
T ss_dssp             HHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTT-
T ss_pred             HHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHhccCCC-
Confidence            9999876532222   22222222211   1    112332   2332 234566777888999999999887643221 


Q ss_pred             cccccHHHHHHhhhhh----cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC
Q 011210          266 KGRKGLIDLLMEVEDE----NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST  341 (491)
Q Consensus       266 ~~~~~~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~  341 (491)
                       ...|+++.+++..++    .+..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++++.   +
T Consensus       242 -~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~---~  317 (477)
T 1r9o_A          242 -NPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR---N  317 (477)
T ss_dssp             -CCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS---S
T ss_pred             -CchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC---C
Confidence             146899999864322    13468999999999999999999999999999999999999999999999999874   2


Q ss_pred             CCCCCHHHHhccHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCC
Q 011210          342 QKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWD  420 (491)
Q Consensus       342 ~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl  420 (491)
                      +. ++.+++++||||+|||+|+||++|+++ +++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       318 ~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l  396 (477)
T 1r9o_A          318 RS-PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL  396 (477)
T ss_dssp             SC-CCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGB
T ss_pred             CC-CChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceE
Confidence            33 889999999999999999999999999 5899999999999999999999999999999999999999999999999


Q ss_pred             CCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC--Cc---cccccCCCCCCCeEEEeccC
Q 011210          421 NHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC--PA---EYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       421 ~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~  491 (491)
                      +.+   .....++|||.|+|.|+|++||++|+++++++|+++|++++.++..  ..   ....+..| .+++|++++|+
T Consensus       397 ~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~  474 (477)
T 1r9o_A          397 DEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFIPIH  474 (477)
T ss_dssp             CTTSCBCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEEECC
T ss_pred             CCCCCcCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEEEec
Confidence            754   2356899999999999999999999999999999999999876532  11   22234566 78999999874


No 14 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=3.7e-72  Score=551.42  Aligned_cols=431  Identities=20%  Similarity=0.332  Sum_probs=362.0

Q ss_pred             cCCCCCC-CCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccc-
Q 011210           42 KHSLPPG-DMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMG-  118 (491)
Q Consensus        42 ~~~~pPg-p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~-  118 (491)
                      ..++||| |+++|++||++++..     +++.++.+++++||+  ||+++++|.++++|++++.+++++.++. .+... 
T Consensus         9 ~~~~PPg~P~~lP~iG~l~~~~~-----~~~~~~~~~~~~yG~--v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~   81 (461)
T 3i3k_A            9 GVKSPPYIFSPIPFLGHAIAFGK-----SPIEFLENAYEKYGP--VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAED   81 (461)
T ss_dssp             -CCCCCBCCCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHH
T ss_pred             CCCCCCCCCCCCCccccHHhhcc-----CHHHHHHHHHHHhCC--EEEEEecCceEEEEeChHHHHHHHhccccccccch
Confidence            4578999 899999999999875     799999999999999  9999999999999999999999998764 33321 


Q ss_pred             -ccccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHH
Q 011210          119 -YPTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIA  197 (491)
Q Consensus       119 -~~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~  197 (491)
                       +......++|...++..+|+.|+++||++.+ .|+...++.+.+.+.+++.++++.|.+.+ .+|+.+.+..++.++++
T Consensus        82 ~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~~~-~f~~~~l~~~~~~~~~~~~~ll~~l~~~~-~~dl~~~~~~~~~~~~~  159 (461)
T 3i3k_A           82 VYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKS-GLNIAHFKQHVSIIEKETKEYFESWGESG-EKNVFEALSELIILTAS  159 (461)
T ss_dssp             HHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHH-HSSHHHHHHHHHHHHHHHHHHGGGGCSEE-EEEHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhcCCeeeeCCCcHHHHHHHHHHhh-hhCHHHHHHHHHHHHHHHHHHHHHhhhcC-CcCHHHHHHHHHHHHHH
Confidence             1122233456433334579999999999999 89999999999999999999999997655 79999999999999999


Q ss_pred             HHhcCCCCchh-hhhHHHHHHHHHhccc---CCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHH
Q 011210          198 NIFLGSSSDSV-IGSVEKHYIDYAHGLI---SPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLID  273 (491)
Q Consensus       198 ~~~fG~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  273 (491)
                      +++||.+.... ...+.+.+..+...+.   ..+|.++|...+++..++.+.+.+++.+.++++++...    ..+|+++
T Consensus       160 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~d~l~  235 (461)
T 3i3k_A          160 HCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE----KIDDILQ  235 (461)
T ss_dssp             HHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC----CCCSHHH
T ss_pred             HHHccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc----ccccHHH
Confidence            99999865432 2334444444443321   13566777766777788888999999999988865432    1579999


Q ss_pred             HHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcc
Q 011210          274 LLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQM  353 (491)
Q Consensus       274 ~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l  353 (491)
                      .+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++..   ...++.+++++|
T Consensus       236 ~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~---~~~~~~~~~~~l  312 (461)
T 3i3k_A          236 TLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN---LPPLTYDQLKDL  312 (461)
T ss_dssp             HHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT---CCCCCHHHHHTC
T ss_pred             HHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCC---CCCCCHHHHhcC
Confidence            99988766666799999999999999999999999999999999999999999999999998743   222799999999


Q ss_pred             HHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC---CCCCCcc
Q 011210          354 EYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT---TRPGSFI  430 (491)
Q Consensus       354 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~---~~~~~~~  430 (491)
                      |||+|||+|++|++|++++++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|+||||++.+   .....++
T Consensus       313 ~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~  392 (461)
T 3i3k_A          313 NLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYV  392 (461)
T ss_dssp             HHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSSSC
T ss_pred             hHHHHHHHHHHhcCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCccee
Confidence            9999999999999999988999999999999999999999999999999999999999999999999865   2467899


Q ss_pred             cccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccc-cCCCCCCCeEEEe
Q 011210          431 PFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLP-VPRPSDQCLAKVV  488 (491)
Q Consensus       431 ~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~  488 (491)
                      |||+|+|.|||+.||.+|++++++.|+++|++++.++. +...+.. +..|.+++.+.=.
T Consensus       393 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  452 (461)
T 3i3k_A          393 PFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKR  452 (461)
T ss_dssp             TTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEeec
Confidence            99999999999999999999999999999999998764 3333333 5788887777543


No 15 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.6e-72  Score=559.65  Aligned_cols=432  Identities=18%  Similarity=0.246  Sum_probs=340.6

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      ...++||||++      ++++.    .++++..+.+|+++||+  |+++++|+.++++|+||+.+++++.++. .|.++.
T Consensus        26 ~~~~lPPGP~~------l~~~~----~~~~~~~~~~l~~~yG~--v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~   93 (496)
T 3qz1_A           26 RNLHLPPLVPG------FLHLL----QPNLPIHLLSLTQKLGP--VYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP   93 (496)
T ss_dssp             ---CCCCBCSC------SCTTS----SSCHHHHHHHGGGTSCS--EEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCC
T ss_pred             cCCCCCcCCcc------ccccC----CCcchHHHHHHHHHhCC--EEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence            34588999987      33333    36899999999999999  9999999999999999999999998865 454332


Q ss_pred             cc-cccccc-cccceeecc-chhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHHHH
Q 011210          120 PT-STNKLT-FRGSFITAS-KEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATFKI  195 (491)
Q Consensus       120 ~~-~~~~~~-g~~~l~~~~-g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~~~  195 (491)
                      .. ...... |..++++.+ |+.|+++||++.+ .|+...++.+.+.+.++++++++.+.. .++++|+.+++..+++++
T Consensus        94 ~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~-~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dv  172 (496)
T 3qz1_A           94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRS-ALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSI  172 (496)
T ss_dssp             CCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHHH-HHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHH
T ss_pred             CcchHHHhcCCCCceEECCCCHHHHHHHHHHHH-HHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHH
Confidence            21 122222 434777778 9999999999999 888777788999999999999999853 445899999999999999


Q ss_pred             HHHHhcCCCCchhhhhHHHHHHHHHhccc-------CCCCC--CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhcc
Q 011210          196 IANIFLGSSSDSVIGSVEKHYIDYAHGLI-------SPFPI--NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQK  266 (491)
Q Consensus       196 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  266 (491)
                      +++++||...+.....+.+.+........       ..+|+  ++|....++..+..+.+.+++.+.++++++....+  
T Consensus       173 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--  250 (496)
T 3qz1_A          173 ICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAG--  250 (496)
T ss_dssp             TTTTSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSS--
T ss_pred             HHHHhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--
Confidence            99999999332222233333322221111       11232  34544556777888899999999999888764332  


Q ss_pred             ccccHHHHHHhhhhhc----C-CCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCC-
Q 011210          267 GRKGLIDLLMEVEDEN----G-TKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPS-  340 (491)
Q Consensus       267 ~~~~~~~~ll~~~~~~----~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~-  340 (491)
                      ...|+++.+++..++.    + ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.... 
T Consensus       251 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  330 (496)
T 3qz1_A          251 QWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASC  330 (496)
T ss_dssp             CCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSS
T ss_pred             CccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCccc
Confidence            2568999999865432    1 268999999999999999999999999999999999999999999999999975321 


Q ss_pred             CCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCC
Q 011210          341 TQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRW  419 (491)
Q Consensus       341 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf  419 (491)
                      ++. + .+++++||||+|||+|+||++|+++. ++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||
T Consensus       331 ~~~-~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~  408 (496)
T 3qz1_A          331 SRV-T-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRF  408 (496)
T ss_dssp             SCC-S-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCC
T ss_pred             CCC-C-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccc
Confidence            233 6 88999999999999999999999996 78999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC--CCcccc---c-cCCCCCCCeEEEeccC
Q 011210          420 DNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE--CPAEYL---P-VPRPSDQCLAKVVGFK  491 (491)
Q Consensus       420 l~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~--~~~~~~---~-~~~~~~~~~~~~~~~~  491 (491)
                      ++.+. ...++|||.|+|.|+|++||++|+++++++|+++|++++.++.  ......   . +..| .+++|++++|+
T Consensus       409 l~~~~-~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~R~  484 (496)
T 3qz1_A          409 LEPGA-NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKV-QPFQVRLQPRG  484 (496)
T ss_dssp             C---C-CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCC-CCCCCCCCCC-
T ss_pred             cCCCC-CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecC-CceEEEEEEec
Confidence            97653 3489999999999999999999999999999999999987543  222221   2 3444 58999999884


No 16 
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=9.4e-72  Score=552.81  Aligned_cols=438  Identities=17%  Similarity=0.221  Sum_probs=347.4

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT  121 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~  121 (491)
                      +.+.+|||+++|+. +++.+......++++.++.+|+++||+  |+++++|+.++|+++||++++++|++++.+.++...
T Consensus         7 pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~--i~~~~~g~~~~vvv~dp~~~~~il~~~~~f~~r~~~   83 (487)
T 3n9y_A            7 PFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGP--IYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLI   83 (487)
T ss_dssp             CGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCS--EEEEEETTEEEEEECCHHHHHHHHHTCCSSCCCCCC
T ss_pred             CHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCc--eeeccCCCCCEEEEcCHHHHHHHHHhCCCCCCCCCC
Confidence            44557999988876 777765432234788999999999999  999999998999999999999999876655443221


Q ss_pred             cc----ccc-ccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc-------CCCCeehHHHHH
Q 011210          122 ST----NKL-TFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS-------LDTPIEFLTEMR  189 (491)
Q Consensus       122 ~~----~~~-~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~vdl~~~~~  189 (491)
                      ..    ... .+..+++..+|+.|+++||++.+.+|+.++++.+.+.+.++++++++.+..       ++.++|+..++.
T Consensus        84 ~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~  163 (487)
T 3n9y_A           84 PPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLF  163 (487)
T ss_dssp             HHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHHH
T ss_pred             cHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHHHH
Confidence            11    111 133567788999999999999984589999999999999999999988742       234799999999


Q ss_pred             HHHHHHHHHHhcCCCCchhh-------hhHHHHHHHHHhccc--CCCCC----CCCCcchHHHHHHHHHHHHHhHHHHHH
Q 011210          190 KATFKIIANIFLGSSSDSVI-------GSVEKHYIDYAHGLI--SPFPI----NLPGFSFHKAMKARDMLGEILQPVLNE  256 (491)
Q Consensus       190 ~~~~~~~~~~~fG~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~----~~p~~~~~~~~~~~~~l~~~~~~~i~~  256 (491)
                      .++++++++++||.+.+...       ..+.+.+..+.....  ..+|.    +++...+++..+..+.+.+.+.+.+++
T Consensus       164 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  243 (487)
T 3n9y_A          164 RFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQN  243 (487)
T ss_dssp             HHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864321       223333333322211  11221    111112233444555566667777766


Q ss_pred             HHHchhhhc---cccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 011210          257 RRAMKSDEQ---KGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQED  333 (491)
Q Consensus       257 ~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  333 (491)
                      +.+......   ....|+++.+++..     .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~d~l~~ll~~~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  318 (487)
T 3n9y_A          244 FYWELRQKGSVHHDYRGILYRLLGDS-----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLA  318 (487)
T ss_dssp             HHHHHHHHCCCCSSCCCHHHHHHHSC-----SSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCcccchHHHHHHHHhcC-----CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            554432221   12478999998642     5899999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCC
Q 011210          334 IIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQ  413 (491)
Q Consensus       334 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  413 (491)
                      +++...   . .+.+++++||||+|||+|+||++|++++++|.+++|++++||.|||||.|+++.+++||||++|+||++
T Consensus       319 ~~~~~~---~-~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~  394 (487)
T 3n9y_A          319 ARHQAQ---G-DMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPEN  394 (487)
T ss_dssp             HHHHTT---T-CHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTS
T ss_pred             hhcccc---c-chhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCccc
Confidence            988532   2 568999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC--CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEecc
Q 011210          414 FDPSRWDNHTT--RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       414 F~PeRfl~~~~--~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      |+||||++.+.  ....++|||.|+|.|+|++||++|+++++++|+++|++++.+++ .+.....+..|.++++|+|++|
T Consensus       395 F~PeR~l~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  474 (487)
T 3n9y_A          395 FDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPF  474 (487)
T ss_dssp             CCGGGGTCSCTTSSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCEEEEEC
T ss_pred             CChhhcCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCceeEEEEC
Confidence            99999998542  35789999999999999999999999999999999999987653 2334455789999999999988


Q ss_pred             C
Q 011210          491 K  491 (491)
Q Consensus       491 ~  491 (491)
                      +
T Consensus       475 ~  475 (487)
T 3n9y_A          475 N  475 (487)
T ss_dssp             -
T ss_pred             C
Confidence            4


No 17 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=7.9e-71  Score=543.98  Aligned_cols=436  Identities=20%  Similarity=0.326  Sum_probs=346.4

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCC--chHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSE--PQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMG  118 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~--~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~  118 (491)
                      +.++||||+++|++||++.+..    +.  ++..+.+++++||+  |+++++++.++++|+||+.+++++.+++ .|.+.
T Consensus        10 ~~~lpPgP~~~p~~G~~~~~~~----~~~~~~~~~~~l~~~yG~--v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~   83 (481)
T 3czh_A           10 PMGFPPGPPGLPFIGNIYSLAA----SSELPHVYMRKQSQVYGE--IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR   83 (481)
T ss_dssp             --CCCCCCCCBTTTBHHHHHHH----CSSCHHHHHHHHHHHHCS--EEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBC
T ss_pred             CCCCCCCCCCCcccccHhhcCc----ccCcHHHHHHHHHHHhCC--EEEEEECCccEEEECCHHHHHHHHhhchHhhCCC
Confidence            3478999999999999988764    23  88999999999999  9999999889999999999999998864 45443


Q ss_pred             ccc-cccccccccc-eeeccchhHHHHHHhhhccCcChhhh--HHHHHHHHHHHHHHHhhhhc-CCCCeehHHHHHHHHH
Q 011210          119 YPT-STNKLTFRGS-FITASKEGQKRIRKLATSPLKGHKAI--VVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEMRKATF  193 (491)
Q Consensus       119 ~~~-~~~~~~g~~~-l~~~~g~~~~~~Rr~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~~~~~~  193 (491)
                      ... ....+.+..+ ++..+|+.|+++||++.+ .|++..+  ..+.+.+.++++++++.+.. +++++|+.+.+..+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~-~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~  162 (481)
T 3czh_A           84 PCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVN-SFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVS  162 (481)
T ss_dssp             CCCHHHHHHHTTCSSTTCCSSHHHHHHHHHHHH-HHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHH
T ss_pred             CCcHHHHhhcCCCCeEeCCCChHHHHHHHHHHH-HHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHH
Confidence            211 1222223334 445689999999999999 7776544  57889999999999999853 3447999999999999


Q ss_pred             HHHHHHhcCCCCchhhh---hHHHHHHHHHhc-------ccCCCCC--CCCCcchHHHHHHHHHHHHHhHHHHHHHHHch
Q 011210          194 KIIANIFLGSSSDSVIG---SVEKHYIDYAHG-------LISPFPI--NLPGFSFHKAMKARDMLGEILQPVLNERRAMK  261 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  261 (491)
                      +++++++||.+.+....   .+.+.+......       ....+|+  ++|.....+..++.+.+.+++.+.++++++..
T Consensus       163 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  242 (481)
T 3czh_A          163 NITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNR  242 (481)
T ss_dssp             HHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999998653222   222222222221       1111332  24433455667778888999999999887653


Q ss_pred             hhhccccccHHHHHHhhhhh----cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhc
Q 011210          262 SDEQKGRKGLIDLLMEVEDE----NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKK  337 (491)
Q Consensus       262 ~~~~~~~~~~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~  337 (491)
                      ..+  ..+|+++.+++..++    .+..++++++.+++..+++||+|||+++++|++++|++||++|+||++|++++++.
T Consensus       243 ~~~--~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  320 (481)
T 3czh_A          243 KPQ--LPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGP  320 (481)
T ss_dssp             CTT--CCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred             CCC--chHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCC
Confidence            221  146999999986543    13469999999999999999999999999999999999999999999999999873


Q ss_pred             CCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 011210          338 RPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDP  416 (491)
Q Consensus       338 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  416 (491)
                         ++. ++.+++++||||+|||+|+||++|+++ +++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+|
T Consensus       321 ---~~~-~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P  396 (481)
T 3czh_A          321 ---NGK-PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHP  396 (481)
T ss_dssp             ---SSC-CCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCG
T ss_pred             ---CCC-CChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCC
Confidence               233 899999999999999999999999999 578999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC---CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccc-cccCCCCCCCeEEEecc
Q 011210          417 SRWDNHT---TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEY-LPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       417 eRfl~~~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~  490 (491)
                      |||++.+   .....++|||.|+|.|+|++||++|++++++.|+++|++++.++. ..... .....-+.++.+++++|
T Consensus       397 eR~l~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  475 (481)
T 3czh_A          397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLICAERR  475 (481)
T ss_dssp             GGGBCTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCCCCCBEEEEC
T ss_pred             CceeCCCCCCcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCCceEEEEEec
Confidence            9999754   346789999999999999999999999999999999999986543 11211 12233345678888876


No 18 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.2e-71  Score=553.19  Aligned_cols=437  Identities=17%  Similarity=0.284  Sum_probs=326.1

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-cccccc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGY  119 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~  119 (491)
                      ++.++||||++||++||++.+.     ++++.++.+|+++||+  ||++++++.++++|+||+.+++++.++. .|.++.
T Consensus         6 ~~~~~pPgP~~~P~iG~~~~~~-----~~~~~~~~~~~~~yG~--i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~   78 (507)
T 3pm0_A            6 SSKGKPPGPFAWPLIGNAAAVG-----QAAHLSFARLARRYGD--VFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRP   78 (507)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCC
T ss_pred             CCCCCCcCCCCCCeeCchhhcC-----ccHHHHHHHHHHHhCC--EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCC
Confidence            3457899999999999998886     4899999999999999  9999999999999999999999997654 454332


Q ss_pred             cc-ccccccccccee-eccchhHHHHHHhhhccCcChhh------hHHHHHHHHHHHHHHHhhhhc---CCCCeehHHHH
Q 011210          120 PT-STNKLTFRGSFI-TASKEGQKRIRKLATSPLKGHKA------IVVYIDNIEEIVIKSLKGWAS---LDTPIEFLTEM  188 (491)
Q Consensus       120 ~~-~~~~~~g~~~l~-~~~g~~~~~~Rr~~~~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~---~~~~vdl~~~~  188 (491)
                      .. ......+..+++ ..+|+.|+++||++.+ .|+...      ...+.+.+.++++++++.+..   ++.++|+.+++
T Consensus        79 ~~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~  157 (507)
T 3pm0_A           79 SFASFRVVSGGRSMAFGHYSEHWKVQRRAAHS-MMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLT  157 (507)
T ss_dssp             CCHHHHHGGGGTCSSSSCSSHHHHHHHHHHHH-HHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHH
T ss_pred             cchHHHhhcCCCceEECCCChHHHHHHHHHHH-HHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHH
Confidence            21 112222334554 4469999999999987 554333      234888999999999988742   24489999999


Q ss_pred             HHHHHHHHHHHhcCCCCchhhhhH---HHHHHHHHhc-----ccCCCCC--CCCCc---chHHHHHHHHHHHHHhHHHHH
Q 011210          189 RKATFKIIANIFLGSSSDSVIGSV---EKHYIDYAHG-----LISPFPI--NLPGF---SFHKAMKARDMLGEILQPVLN  255 (491)
Q Consensus       189 ~~~~~~~~~~~~fG~~~~~~~~~~---~~~~~~~~~~-----~~~~~~~--~~p~~---~~~~~~~~~~~l~~~~~~~i~  255 (491)
                      ..+++++++.++||.+++.....+   .+.+..+...     ....+|+  ++|..   ..++..+..+.+.+++.+.++
T Consensus       158 ~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (507)
T 3pm0_A          158 VVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFL  237 (507)
T ss_dssp             HHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999865433222   2222222221     1112332  23432   245566777888888999888


Q ss_pred             HHHHchhhhccccccHHHHHHhhhhhc--C------CCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHH
Q 011210          256 ERRAMKSDEQKGRKGLIDLLMEVEDEN--G------TKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKA  327 (491)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~ll~~~~~~--~------~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  327 (491)
                      ++++....+.. ..|+++.+++..++.  +      ..++++++.+++..+++||+|||+++++|++++|++||++|+||
T Consensus       238 ~~~~~~~~~~~-~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl  316 (507)
T 3pm0_A          238 RHCESLRPGAA-PRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRV  316 (507)
T ss_dssp             HHHHHCCTTCC-CCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHhccccccC-CccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHH
Confidence            88775443222 578999999765421  1      25899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCC
Q 011210          328 KEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPE  406 (491)
Q Consensus       328 r~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~  406 (491)
                      ++|++++++.+   +. ++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||+
T Consensus       317 ~~Ei~~~~~~~---~~-~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~  392 (507)
T 3pm0_A          317 QAELDQVVGRD---RL-PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPL  392 (507)
T ss_dssp             HHHHHHHTCTT---SC-CCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTT
T ss_pred             HHHHHHhcCCC---CC-CChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcc
Confidence            99999998632   33 8999999999999999999999999985 7899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCC-----CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Cccc--cccCC
Q 011210          407 NYPDPKQFDPSRWDNHTT-----RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PAEY--LPVPR  478 (491)
Q Consensus       407 ~~~~p~~F~PeRfl~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~~--~~~~~  478 (491)
                      +|+||++|+||||++.+.     ....++|||.|+|.|+|++||++|++++++.|+++|++++.++.. +...  ..+..
T Consensus       393 ~~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  472 (507)
T 3pm0_A          393 KWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIK  472 (507)
T ss_dssp             TCSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEE
T ss_pred             cCCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCcccc
Confidence            999999999999997642     125899999999999999999999999999999999999875432 2211  12334


Q ss_pred             CCCCCeEEEeccC
Q 011210          479 PSDQCLAKVVGFK  491 (491)
Q Consensus       479 ~~~~~~~~~~~~~  491 (491)
                      | .+++|++++|+
T Consensus       473 p-~~~~v~~~~R~  484 (507)
T 3pm0_A          473 P-KSFKVNVTLRE  484 (507)
T ss_dssp             E-CSCCEEEEESS
T ss_pred             C-CCcEEEEEEcc
Confidence            4 46799999874


No 19 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.2e-70  Score=544.88  Aligned_cols=432  Identities=19%  Similarity=0.323  Sum_probs=341.2

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCc-ccccccc-c
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDE-NFKMGYP-T  121 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~-~~~~~~~-~  121 (491)
                      +.||||+++|++||++.+.     ++++..+.+++++||+  ||++++++.++++++||+.+++++.++. .|.++.. .
T Consensus        16 p~~PgP~~~p~~G~~~~~~-----~~~~~~~~~l~~~yG~--v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~   88 (495)
T 2hi4_A           16 KSPPEPWGWPLLGHVLTLG-----KNPHLALSRMSQRYGD--VLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY   88 (495)
T ss_dssp             BCCCCCCCBTTTBTHHHHT-----TCHHHHHHHHHHHHCS--EEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH
T ss_pred             CCCCCCCCCcceeeHHhcC-----ccHHHHHHHHHHHhCC--EEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH
Confidence            4459999999999998775     4789999999999999  9999999999999999999999998764 4543321 1


Q ss_pred             cccccccccceeec--cchhHHHHHHhhhccCcCh---hhh---H---HHHHHHHHHHHHHHhhhh---cCCCCeehHHH
Q 011210          122 STNKLTFRGSFITA--SKEGQKRIRKLATSPLKGH---KAI---V---VYIDNIEEIVIKSLKGWA---SLDTPIEFLTE  187 (491)
Q Consensus       122 ~~~~~~g~~~l~~~--~g~~~~~~Rr~~~~~~~~~---~~l---~---~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~  187 (491)
                      ....+.+..++++.  +|+.|+++||++.+ .|+.   .+.   +   .+.+.+.++++++++.+.   .+++++|+.++
T Consensus        89 ~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~-~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~  167 (495)
T 2hi4_A           89 TSTLITDGQSLTFSTDSGPVWAARRRLAQN-ALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQ  167 (495)
T ss_dssp             HHHTSTTSCCTTTSSCCSHHHHHHHHHHHH-HHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHH
T ss_pred             HHHHhcCCCCEEEcCCCChHHHHHHHHHHH-HHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHH
Confidence            11222233566666  69999999999998 6432   222   2   688999999999999874   34458999999


Q ss_pred             HHHHHHHHHHHHhcCCCCchhhhh---HHHHHHHHHhcc-----cCCCCC--CCCCcchHHHHHHHHHHHHHhHHHHHHH
Q 011210          188 MRKATFKIIANIFLGSSSDSVIGS---VEKHYIDYAHGL-----ISPFPI--NLPGFSFHKAMKARDMLGEILQPVLNER  257 (491)
Q Consensus       188 ~~~~~~~~~~~~~fG~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~  257 (491)
                      +..++++++++++||.+++....+   +.+.+..+....     ...+|+  ++|....++..++.+.+.+++.+.|+++
T Consensus       168 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r  247 (495)
T 2hi4_A          168 VVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEH  247 (495)
T ss_dssp             HHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999976432222   222222332211     112332  2343344566777888899999999988


Q ss_pred             HHchhhhccccccHHHHHHhhhhh----cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHH
Q 011210          258 RAMKSDEQKGRKGLIDLLMEVEDE----NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQED  333 (491)
Q Consensus       258 ~~~~~~~~~~~~~~~~~ll~~~~~----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~  333 (491)
                      ++....+  ...|+++.+++...+    .+..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+++
T Consensus       248 ~~~~~~~--~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  325 (495)
T 2hi4_A          248 YQDFDKN--SVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDT  325 (495)
T ss_dssp             HHTCCTT--CCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             HHhhccc--ccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence            7653221  146999999965322    1335899999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCC
Q 011210          334 IIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPK  412 (491)
Q Consensus       334 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  412 (491)
                      +++.   ++. ++.+++++||||+|||+|+||++|+++. ++|.+.+|++++|+.|||||.|.++.+++||||++|+||+
T Consensus       326 v~~~---~~~-~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~  401 (495)
T 2hi4_A          326 VIGR---ERR-PRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPS  401 (495)
T ss_dssp             HTTT---SSC-CCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTT
T ss_pred             hcCC---CCC-CChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcC
Confidence            9873   233 8899999999999999999999999995 8899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Ccc--ccccCCCCCCC
Q 011210          413 QFDPSRWDNHTT------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PAE--YLPVPRPSDQC  483 (491)
Q Consensus       413 ~F~PeRfl~~~~------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~--~~~~~~~~~~~  483 (491)
                      +|+||||++.+.      ....++|||.|+|.|+|++||++|++++++.|+++|++++.++.. +..  ...+..|...+
T Consensus       402 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~  481 (495)
T 2hi4_A          402 EFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCE  481 (495)
T ss_dssp             SCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCCCCC
T ss_pred             ccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCCCcc
Confidence            999999997542      246789999999999999999999999999999999999875432 222  22345555433


Q ss_pred             eEEEecc
Q 011210          484 LAKVVGF  490 (491)
Q Consensus       484 ~~~~~~~  490 (491)
                      +|+++ |
T Consensus       482 ~v~~~-R  487 (495)
T 2hi4_A          482 HVQAR-R  487 (495)
T ss_dssp             CBEEE-C
T ss_pred             eEEEE-E
Confidence            88887 6


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=1.8e-71  Score=547.00  Aligned_cols=406  Identities=22%  Similarity=0.350  Sum_probs=316.2

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccc-ccc-cc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENF-KMG-YP  120 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~-~~~-~~  120 (491)
                      ...||||+++|++||++.+.+     +++.++.++++ ||+  |+++++++.++++|+||+.+++++.++ .+ ... ..
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~-----~p~~~~~~l~~-yGp--v~~~~~g~~~~~vv~~~~~i~~il~~~-~~~~~~~~~   92 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLAR-----DPLAFMSQLRD-HGD--VVRIKLGPKTVYAVTNPELTGALALNP-DYHIAGPLW   92 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHH-----CHHHHHHHHGG-GCS--EEEEEETTEEEEEECSHHHHHHHHHCT-TC-------
T ss_pred             CCCCCCCCCCCcccchHHhcc-----CHHHHHHHHHH-hCC--EEEEEeCCccEEEECCHHHHHHHHhCc-CcccccchH
Confidence            456899999999999999885     89999999988 999  999999999999999999999999887 44 222 12


Q ss_pred             ccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHh
Q 011210          121 TSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIF  200 (491)
Q Consensus       121 ~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~  200 (491)
                      .....+.|..+++..+|+.|+++|+++.+ .|++++++.+.+.+.+.++++++.+.+++ ++|+...+..+++++++.++
T Consensus        93 ~~~~~~~g~~~l~~~dg~~h~~~R~~l~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~~~vi~~~~  170 (467)
T 3dbg_A           93 ESLEGLLGKEGVATANGPLHRRQRRTIQP-AFRLDAIPAYGPIMEEEAHALTERWQPGK-TVDATSESFRVAVRVAARCL  170 (467)
T ss_dssp             -----------------------CGGGHH-HHSTTTSTTTHHHHHHHHHHHHHHSCTTS-CEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCcccCCcHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHhccCC-cCcHHHHHHHHHHHHHHHHH
Confidence            22334445467778899999999999999 99999999999999999999999997655 89999999999999999999


Q ss_pred             cCCCCchh-hhhHHHHHHHHHhcccC--CCC----CCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHH
Q 011210          201 LGSSSDSV-IGSVEKHYIDYAHGLIS--PFP----INLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLID  273 (491)
Q Consensus       201 fG~~~~~~-~~~~~~~~~~~~~~~~~--~~~----~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  273 (491)
                      ||.+.+.. ...+...+..+...+..  .+|    .++|....++..++.+.+.+++.+.+++++++..    ...|+++
T Consensus       171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~dll~  246 (467)
T 3dbg_A          171 LRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQ----KPDDLLT  246 (467)
T ss_dssp             SCSSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTCCS----SCCSHHH
T ss_pred             hCCcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcCC----CchHHHH
Confidence            99987642 33444444444333211  122    1233333445566677888899999988776422    1579999


Q ss_pred             HHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcc
Q 011210          274 LLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQM  353 (491)
Q Consensus       274 ~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~l  353 (491)
                      .+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|++||+|++++.+.    .. ++.+++++|
T Consensus       247 ~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~----~~-~~~~~l~~l  321 (467)
T 3dbg_A          247 ALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG----RP-VAFEDVRKL  321 (467)
T ss_dssp             HHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT----SC-CCHHHHTTC
T ss_pred             HHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CC-CCHHHHhhC
Confidence            9998876655579999999999999999999999999999999999999999999999999873    23 899999999


Q ss_pred             HHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC---CCCCCcc
Q 011210          354 EYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT---TRPGSFI  430 (491)
Q Consensus       354 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~---~~~~~~~  430 (491)
                      |||+|||+|+||++|+++.++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||++.+   .....++
T Consensus       322 ~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~  401 (467)
T 3dbg_A          322 RHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMK  401 (467)
T ss_dssp             HHHHHHHHHHHHHSCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCC
T ss_pred             HHHHHHHHHHhhcCCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCcccc
Confidence            9999999999999999998999999999999999999999999999999999999999999999999643   3467899


Q ss_pred             cccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC
Q 011210          431 PFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE  468 (491)
Q Consensus       431 ~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~  468 (491)
                      |||+|+|.|+|++||++|++++++.|+++|++++.++.
T Consensus       402 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  439 (467)
T 3dbg_A          402 PFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGS  439 (467)
T ss_dssp             SSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTC
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCC
Confidence            99999999999999999999999999999999987653


No 21 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.2e-70  Score=540.67  Aligned_cols=427  Identities=19%  Similarity=0.312  Sum_probs=343.0

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccccc
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTST  123 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~  123 (491)
                      ..||||+++|++||++.+.    .++++..+.+|+++||+  |+++++++.++++|+||+.+++++.++. +........
T Consensus         3 ~~~PGP~~~p~iG~l~~~~----~~~~~~~~~~~~~~yG~--v~~~~~~~~~~v~v~~~~~~~~il~~~~-f~~~~~~~~   75 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLN----TDKPVQALMKIADELGE--IFKFEAPGRVTRYLSSQRLIKEACDESR-FDKNLSQAL   75 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGC----SSCHHHHHHHHHHHHCS--EEEEEETTEEEEEECCHHHHHHHTCTTT-EEECCCHHH
T ss_pred             CCCCCCCCCCccccHHHHh----cccchHHHHHHHHHhCC--eEEEecCCccEEEECCHHHHHHHHhhcC-cCcCchhHH
Confidence            4469999999999998875    25788899999999999  9999999999999999999999997543 322111111


Q ss_pred             ---cccccccceeec--cchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc--CCCCeehHHHHHHHHHHHH
Q 011210          124 ---NKLTFRGSFITA--SKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS--LDTPIEFLTEMRKATFKII  196 (491)
Q Consensus       124 ---~~~~g~~~l~~~--~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~vdl~~~~~~~~~~~~  196 (491)
                         ....| .+++..  +|+.|+++||++.+ .|++++++.+.+.+.+.++++++.+..  .++++|+..++..++++++
T Consensus        76 ~~~~~~~~-~~l~~~~~~g~~w~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi  153 (470)
T 2ij2_A           76 KFVRDFAG-DGLFTSWTHEKNWKKAHNILLP-SFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTI  153 (470)
T ss_dssp             HHHHHHHT-TSGGGSCTTSHHHHHHHHHHGG-GGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHhcC-CceEEcCCCchHHHHHHHHhcc-ccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHH
Confidence               11123 455554  89999999999999 999999999999999999999998853  2347999999999999999


Q ss_pred             HHHhcCCCCchh----hhhHHHHHHHHHhcc--cCCCCC---CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccc
Q 011210          197 ANIFLGSSSDSV----IGSVEKHYIDYAHGL--ISPFPI---NLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKG  267 (491)
Q Consensus       197 ~~~~fG~~~~~~----~~~~~~~~~~~~~~~--~~~~~~---~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  267 (491)
                      +.++||.+.+..    ...+.+.+.......  ....+.   +++.....+..++.+.+.+++.+.+++++++..    .
T Consensus       154 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~  229 (470)
T 2ij2_A          154 GLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGE----Q  229 (470)
T ss_dssp             HHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----C
T ss_pred             HHHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccc----C
Confidence            999999986542    123333333322111  010111   112112334556677888899999988775421    1


Q ss_pred             cccHHHHHHhhhhh-cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCC
Q 011210          268 RKGLIDLLMEVEDE-NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLT  346 (491)
Q Consensus       268 ~~~~~~~ll~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~  346 (491)
                      .+|+++.+++..++ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.    .. ++
T Consensus       230 ~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~----~~-~~  304 (470)
T 2ij2_A          230 SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD----PV-PS  304 (470)
T ss_dssp             CSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS----SS-CC
T ss_pred             chhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC----CC-CC
Confidence            46999999986543 34569999999999999999999999999999999999999999999999999763    23 89


Q ss_pred             HHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCC-eEeCCCCEEEEcccccccCCCCC-CCCCCCCCCCCCCCC-
Q 011210          347 IEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQG-YFIPKGWKVLVYNRGVHYNPENY-PDPKQFDPSRWDNHT-  423 (491)
Q Consensus       347 ~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g-~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~-  423 (491)
                      .+++++||||+|||+|+||++|+++.+.|.+.+|++++| +.|||||.|+++.+++||||++| +||++|+|||| +.. 
T Consensus       305 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~~~  383 (470)
T 2ij2_A          305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-ENPS  383 (470)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SSGG
T ss_pred             HHHHhCCHHHHHHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CCCC
Confidence            999999999999999999999999988899999999999 99999999999999999999999 99999999999 321 


Q ss_pred             -CCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCccc--cccCCCCCCCeEEEeccC
Q 011210          424 -TRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       424 -~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                       .....++|||.|+|.|+|++||++|++++++.|+++|+++ .+++.+...  ..+..|. +++|++++|+
T Consensus       384 ~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~~~~~~~~~~~~~p~-~~~v~~~~R~  452 (470)
T 2ij2_A          384 AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTNYELDIKETLTLKPE-GFVVKAKSKK  452 (470)
T ss_dssp             GSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTCCCCCEEESSSEEET-TCEEEEEECC
T ss_pred             cCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCCCccccccceEecCC-CeEEEEEEcc
Confidence             2346889999999999999999999999999999999999 444333332  2356677 9999999874


No 22 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=1.9e-68  Score=524.53  Aligned_cols=414  Identities=19%  Similarity=0.342  Sum_probs=336.1

Q ss_pred             cCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccc-ccccc-----cccccccceee-ccchh
Q 011210           67 SSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMG-YPTST-----NKLTFRGSFIT-ASKEG  139 (491)
Q Consensus        67 ~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~-~~~~~-----~~~~g~~~l~~-~~g~~  139 (491)
                      +..+++.+.+|+++||+  ||++++++.++++|+||+.++++|.++...... .....     ..++| .+++. .+|+.
T Consensus         9 g~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~g~~   85 (456)
T 3mdm_A            9 GRVLQDVFLDWAKKYGP--VVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFG-QGLVSECNYER   85 (456)
T ss_dssp             CCCHHHHHHHHHHHHCS--EEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESST-TSTTTCCCHHH
T ss_pred             cchHHHHHHHHHHHhCC--eEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccC-CCcccCCChHH
Confidence            46788999999999999  999999999999999999999999764321111 11111     12234 34444 58999


Q ss_pred             HHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---cCCCCeehHHHHHHHHHHHHHHHhcCCCCchhh---hhHH
Q 011210          140 QKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---SLDTPIEFLTEMRKATFKIIANIFLGSSSDSVI---GSVE  213 (491)
Q Consensus       140 ~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~---~~~~  213 (491)
                      |+++||++++ .|+++++..+.+.+.+.++++++.+.   ++++++|+.+++..+++++++.++||.+.+...   ..+.
T Consensus        86 w~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~  164 (456)
T 3mdm_A           86 WHKQRRVIDL-AFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLS  164 (456)
T ss_dssp             HHHHHHHHGG-GGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHH
T ss_pred             HHHHHhhccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHH
Confidence            9999999999 99999999999999999999999874   234589999999999999999999999875432   2233


Q ss_pred             HHHHHHHhccc---CCCCCCCCCc--chHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCH
Q 011210          214 KHYIDYAHGLI---SPFPINLPGF--SFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDD  288 (491)
Q Consensus       214 ~~~~~~~~~~~---~~~~~~~p~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~  288 (491)
                      ..+..+...+.   ..+..++|..  ......++.+.+.+++.++++++++....+.....|+++.+++..+   ..+++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~---~~~~~  241 (456)
T 3mdm_A          165 QAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEE---GAQDD  241 (456)
T ss_dssp             HHHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTS---SCSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcC---CCCCH
Confidence            33322222111   1122334432  1223455667778888888888877654433335699999998642   25789


Q ss_pred             HHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCC
Q 011210          289 LDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTN  368 (491)
Q Consensus       289 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p  368 (491)
                      +++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++..   +. ++.+++++||||+|||+|+||++|
T Consensus       242 ~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~---~~-~~~~~l~~lpyl~a~i~E~lRl~p  317 (456)
T 3mdm_A          242 EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK---RY-LDFEDLGRLQYLSQVLKESLRLYP  317 (456)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC---SS-CCHHHHHHCHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCC---CC-CCHHHHhcCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999999998742   33 899999999999999999999999


Q ss_pred             CCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCC-CCCCCcccccCCCCCCccHHHHHH
Q 011210          369 LSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHT-TRPGSFIPFGGGSRICPGADLAKL  447 (491)
Q Consensus       369 ~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~-~~~~~~~~Fg~G~r~C~G~~la~~  447 (491)
                      ++++++|.+++|++++|+.|||||.|+++.+++||||++|+||++|+||||++.. .....++|||.|+|.|+|++||++
T Consensus       318 ~~~~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~pFg~G~r~C~G~~lA~~  397 (456)
T 3mdm_A          318 PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQM  397 (456)
T ss_dssp             SSCCEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSCCCSSSCCTTCCGGGSCTTHHHHHH
T ss_pred             CccccccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCCCCCCcccCCCCCCcCCCCHHHHHH
Confidence            9998899999999999999999999999999999999999999999999999865 345679999999999999999999


Q ss_pred             HHHHHHHHHHhcCeEeccCCC-CCccccccCCCCCCCeEEEeccC
Q 011210          448 EISIFIHYFLLNYKLELQNPE-CPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       448 ~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      |++++++.|+++|++++.+++ .+.....+..|.++++|++++|+
T Consensus       398 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          398 EVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             HHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECC
T ss_pred             HHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcC
Confidence            999999999999999987653 23333457889999999999874


No 23 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=2.9e-68  Score=527.74  Aligned_cols=430  Identities=21%  Similarity=0.307  Sum_probs=350.5

Q ss_pred             CcCCCCCCCCC-CccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcc--ccc
Q 011210           41 MKHSLPPGDMG-WPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDEN--FKM  117 (491)
Q Consensus        41 ~~~~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~--~~~  117 (491)
                      ...++||||++ +|++||++.+.     .+++.++.+++++||+  ||++++++.++++|++|+.+++++++++.  +..
T Consensus        10 ~~~~~PPgp~~~lPliG~~~~~~-----~~p~~~~~~l~~~yGp--v~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~   82 (491)
T 3v8d_A           10 RQTGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGH--VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKK   82 (491)
T ss_dssp             CCTTSCCEEEEEESSTTTTGGGT-----CCHHHHHHHHHHHHCS--EEEEEETTEEEEEECCGGGHHHHHSCCTTEESSH
T ss_pred             cCCCCCCCCCCCcceeccHHHHh-----cCHHHHHHHHHHHcCC--ceEEEECCEEEEEEcCHHHHHHHHhcCCccchHH
Confidence            34589999999 59999999986     4899999999999999  99999999999999999999999988652  333


Q ss_pred             cccccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh---c---CCCCeehHHHHHHH
Q 011210          118 GYPTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA---S---LDTPIEFLTEMRKA  191 (491)
Q Consensus       118 ~~~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~---~~~~vdl~~~~~~~  191 (491)
                      ........++|...+...+|+.|+++|+.+.+ .|++++++.+.+.+.+++.++++.+.   .   ....+|+.+++..+
T Consensus        83 ~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~-~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~  161 (491)
T 3v8d_A           83 FHFALSAKAFGHRSIDPMDGNTTENINDTFIK-TLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV  161 (491)
T ss_dssp             HHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHH
T ss_pred             HHHHHHHHhcCCcccccccchhHHHHHHHHHH-HcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHH
Confidence            22333445566555555689999999999998 99999999999999999999998641   1   23368999999999


Q ss_pred             HHHHHHHHhcCCCCchhh---hhHH---HHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc
Q 011210          192 TFKIIANIFLGSSSDSVI---GSVE---KHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ  265 (491)
Q Consensus       192 ~~~~~~~~~fG~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (491)
                      ++++++..+||.+.....   ..+.   +.+..+...+.. +...+|.....+..++.+.+.+++.+.++++++.     
T Consensus       162 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~~-----  235 (491)
T 3v8d_A          162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPA-LVAGLPIHMFRTAHNAREKLAESLRHENLQKRES-----  235 (491)
T ss_dssp             HHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCBS-----
T ss_pred             HHHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHH-HHhcCChHHHHHHHHHHHHHHHHHHHHHHhcccc-----
Confidence            999999999999854311   1122   223333333322 3334566666778888888888887766544321     


Q ss_pred             cccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC----
Q 011210          266 KGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST----  341 (491)
Q Consensus       266 ~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~----  341 (491)
                        ..|+++.+++..++.+ .++++++..+++.+++||++||+++++|++++|++||++|+++++|++++++.++..    
T Consensus       236 --~~d~l~~l~~~~~~~~-~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~  312 (491)
T 3v8d_A          236 --ISELISLRMFLNDTLS-TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLE  312 (491)
T ss_dssp             --CCHHHHHHHHHHHHHB-CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSS
T ss_pred             --ccHHHHHHHHHhhccC-CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccc
Confidence              5789999988765543 689999999999999999999999999999999999999999999999999864221    


Q ss_pred             --CCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee----CCeEeCCCCEEEEcccccccCCCCCCCCCCCC
Q 011210          342 --QKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI----QGYFIPKGWKVLVYNRGVHYNPENYPDPKQFD  415 (491)
Q Consensus       342 --~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  415 (491)
                        ...++.+++++||||+|||+|+||++|+ +.++|.+.+|+++    +|+.||||+.|+++.+++|+||++|+||++|+
T Consensus       313 ~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  391 (491)
T 3v8d_A          313 GNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFK  391 (491)
T ss_dssp             SSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCC
T ss_pred             cccccCCHHHHhcChHHHHHHHHHhhcCCC-CccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccC
Confidence              1238999999999999999999999974 5788999999999    99999999999999999999999999999999


Q ss_pred             CCCCCCCCC------------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC---Ccccc----cc
Q 011210          416 PSRWDNHTT------------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC---PAEYL----PV  476 (491)
Q Consensus       416 PeRfl~~~~------------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~----~~  476 (491)
                      ||||++.+.            ....++|||+|+|.|+|++||++|++++++.|+++|||++.+++.   +....    .+
T Consensus       392 p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  471 (491)
T 3v8d_A          392 YDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGI  471 (491)
T ss_dssp             TTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEE
T ss_pred             cccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcc
Confidence            999997542            246789999999999999999999999999999999999987632   22221    26


Q ss_pred             CCCCCCCeEEEe
Q 011210          477 PRPSDQCLAKVV  488 (491)
Q Consensus       477 ~~~~~~~~~~~~  488 (491)
                      ..|..++.|+++
T Consensus       472 ~~p~~~i~v~~~  483 (491)
T 3v8d_A          472 LPPLNDIEFKYK  483 (491)
T ss_dssp             CCBSSCCEEEEE
T ss_pred             cCCCCCeEEEEE
Confidence            888999999886


No 24 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=6.7e-66  Score=499.39  Aligned_cols=400  Identities=17%  Similarity=0.225  Sum_probs=331.3

Q ss_pred             CCccccccHHHHhhhhcCCchHHHHHHHHHcC-CcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccc--ccc-ccccc
Q 011210           51 GWPLVGNMLSHQKAFKSSEPQSFIYNLFERYG-RKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMG--YPT-STNKL  126 (491)
Q Consensus        51 ~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~--~~~-~~~~~  126 (491)
                      +.|++||+..+..     +++.++.+++++|| |  |++++++|.+++++++|+.++.++. ++.+...  .+. ....+
T Consensus         7 g~P~lG~~~~~~~-----~p~~~~~~l~~~yg~p--v~~~~~~g~~~v~v~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~   78 (417)
T 1izo_A            7 HDKSLDNSLTLLK-----EGYLFIKNRTERYNSD--LFQARLLGKNFICMTGAEAAKVFYD-TDRFQRQNALPKRVQKSL   78 (417)
T ss_dssp             BCCCTTHHHHHHH-----HGGGHHHHHHHHTTSS--EEEEEETTEEEEEECSHHHHHHHTC-TTTEECTTCSCHHHHTTT
T ss_pred             CCCccchHHHHhh-----CcHHHHHHHHHHhCCC--eEEeecCCccEEEECCHHHHHHHhc-ccccccccccccchhhhh
Confidence            4499999999875     78999999999998 8  9999998889999999999986654 4334322  221 22345


Q ss_pred             ccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhcCCCCc
Q 011210          127 TFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFLGSSSD  206 (491)
Q Consensus       127 ~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~  206 (491)
                      +|..+++..+|+.|+++|+++.+ .|++++++.+.+.+.+.++++++.|.+++ ++|+.+++..+++++++++ ||.+.+
T Consensus        79 ~g~~~l~~~dg~~h~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~-~~dl~~~~~~~~~~vi~~~-~G~~~~  155 (417)
T 1izo_A           79 FGVNAIQGMDGSAHIHRKMLFLS-LMTPPHQKRLAELMTEEWKAAVTRWEKAD-EVVLFEEAKEILCRVACYW-AGVPLK  155 (417)
T ss_dssp             TCTTCGGGCCHHHHHHHHHHHHH-TSSHHHHHHHHHHHHHHHHHHHHHHTTSS-EEEHHHHHHHHHHHHHHHH-HTCCCC
T ss_pred             ccccceeecCChHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHhcCC-CeeHHHHHHHHHHHHHHHH-cCCCCC
Confidence            56567778899999999999999 99999999999999999999999997655 8999999999999999998 599865


Q ss_pred             hh-hhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCC
Q 011210          207 SV-IGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTK  285 (491)
Q Consensus       207 ~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~  285 (491)
                      +. ...+.+.+..+...+..      ......+..++.+.+.+++.++|++++++....  .++|+++.+++..++++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--~~~d~l~~ll~~~~~~g~~  227 (417)
T 1izo_A          156 ETEVKERADDFIDMVDAFGA------VGPRHWKGRRARPRAEEWIEVMIEDARAGLLKT--TSGTALHEMAFHTQEDGSQ  227 (417)
T ss_dssp             TTTHHHHHHHHHHHHHHTTC------CSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCC--CTTSHHHHHHHCBCTTSCB
T ss_pred             chHHHHHHHHHHHHHhhccc------CCccchhHHHHHHHHHHHHHHHHHHHHhhccCC--CcCCHHHHHHHhccccCCC
Confidence            42 23333333333332211      122345566788889999999999888653211  2568999999876555666


Q ss_pred             CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcc
Q 011210          286 LDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLR  365 (491)
Q Consensus       286 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  365 (491)
                      ++++++.+++..++ ||++||+++++|++++|++||++|+++++|                     ++|||++||+|+||
T Consensus       228 l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E---------------------~~~~l~a~i~E~lR  285 (417)
T 1izo_A          228 LDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG---------------------NSREREMFVQEVRR  285 (417)
T ss_dssp             CCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC---------------------CHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc---------------------CCHHHHHHHHHHhh
Confidence            88888877776654 899999999999999999999999999987                     35899999999999


Q ss_pred             cCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCC----CCCCcc
Q 011210          366 MTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGG----SRICPG  441 (491)
Q Consensus       366 l~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G----~r~C~G  441 (491)
                      ++|+++.++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||++.+.....++|||+|    +|.|+|
T Consensus       286 l~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G~r~~~r~C~G  365 (417)
T 1izo_A          286 YYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPG  365 (417)
T ss_dssp             HSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCCCSSSCCTTCSSCTTSSSCCTT
T ss_pred             cCCcccccceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCCCCcceeCCCCCCCCCCCcCCC
Confidence            9999999899999999999999999999999999999999999999999999999765556789999999    599999


Q ss_pred             HHHHHHHHHHHHHHHHhcCeEeccCCCCCcccc-ccCCCCCCCeEEEeccC
Q 011210          442 ADLAKLEISIFIHYFLLNYKLELQNPECPAEYL-PVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       442 ~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  491 (491)
                      ++||++|++++++.|+++|++++.+++..+... .+..|.++++|++++|+
T Consensus       366 ~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          366 EGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCC
Confidence            999999999999999999999987665444433 35789999999999886


No 25 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=3.6e-67  Score=520.46  Aligned_cols=429  Identities=21%  Similarity=0.295  Sum_probs=327.0

Q ss_pred             CCCCCCCCC-CccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcc--ccccc
Q 011210           43 HSLPPGDMG-WPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDEN--FKMGY  119 (491)
Q Consensus        43 ~~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~--~~~~~  119 (491)
                      .+.||||++ +|++||++++.     .+++.++.+++++||+  ||++++++.++++|+||+.++++++++..  +.+..
T Consensus        12 ~~~pPgp~~~~P~iG~~~~~~-----~~~~~~~~~~~~kyG~--i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~   84 (491)
T 3dax_A           12 TGEPPLENGLIPYLGCALQFG-----ANPLEFLRANQRKHGH--VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH   84 (491)
T ss_dssp             TTCCCEEEEEESCTTTTGGGT-----CCHHHHHHHHHHHHCS--EEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHH
T ss_pred             CCCCCcCCCcccchhhHHHHh-----hCHHHHHHHHHHhcCC--eEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHH
Confidence            468899988 79999998875     3789999999999999  99999999999999999999999987642  22211


Q ss_pred             ccccccccccccee-eccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc------CCCCeehHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFI-TASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS------LDTPIEFLTEMRKAT  192 (491)
Q Consensus       120 ~~~~~~~~g~~~l~-~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~vdl~~~~~~~~  192 (491)
                      .......+|. +++ ..+++.|+++|+.+.+ .|+.+++..+.+.+.+.+.+.++....      ....+|+...+..++
T Consensus        85 ~~~~~~~~g~-~~~~~~~g~~w~~~r~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i  162 (491)
T 3dax_A           85 FATSAKAFGH-RSIDPMDGNTTENINDTFIK-TLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM  162 (491)
T ss_dssp             HHHHHHHHTC-CCCCGGGTSBCCCHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHH
T ss_pred             HHHHHHHcCC-CcccccchhHHHHHHHHHHH-hcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHH
Confidence            1222233453 333 5678889999999988 889999999999998888888876421      123578999999999


Q ss_pred             HHHHHHHhcCCCCchhh------hhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhcc
Q 011210          193 FKIIANIFLGSSSDSVI------GSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQK  266 (491)
Q Consensus       193 ~~~~~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  266 (491)
                      +++++.++||.+.+...      ..+.+.+..+...+.. +...+|.....+..+..+.+.+.+.   +++.+..    .
T Consensus       163 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~~~lp~~~~~~~~~~~~~~~~~~~---~~~~~~~----~  234 (491)
T 3dax_A          163 FEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPA-LVAGLPIHMFRTAHNAREKLAESLR---HENLQKR----E  234 (491)
T ss_dssp             HHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGSHHHHHHHHHHHHHTS---HHHHTTC----B
T ss_pred             HHHhHHHHcCcccccccchhhhhhHHHHHHHHHHHHhHH-HHHhCCHhhhhHHHHHHHHHHHHHH---HHHhhcc----c
Confidence            99999999998754321      1111111111111110 1123443333444444444444332   2222211    1


Q ss_pred             ccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC-----
Q 011210          267 GRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST-----  341 (491)
Q Consensus       267 ~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~-----  341 (491)
                      ...|+++.+++..++.+ .++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++++.....     
T Consensus       235 ~~~d~l~~ll~~~~~~~-~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~  313 (491)
T 3dax_A          235 SISELISLRMFLNDTLS-TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEG  313 (491)
T ss_dssp             SCCHHHHHHHHHHHHHB-CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSS
T ss_pred             chhHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCC
Confidence            15689999887654433 478999999999999999999999999999999999999999999999999853211     


Q ss_pred             -CCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee----CCeEeCCCCEEEEcccccccCCCCCCCCCCCCC
Q 011210          342 -QKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI----QGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDP  416 (491)
Q Consensus       342 -~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  416 (491)
                       ...++.+++++||||+|||+|+||++|+ +.++|.+.+|+++    +||.|||||.|+++.+++|+||++|+||++|+|
T Consensus       314 ~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P  392 (491)
T 3dax_A          314 NPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKY  392 (491)
T ss_dssp             CCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCT
T ss_pred             CccccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCC
Confidence             1127999999999999999999999975 6789999999999    789999999999999999999999999999999


Q ss_pred             CCCCCCCC------------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC-Cc--cc---c-ccC
Q 011210          417 SRWDNHTT------------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC-PA--EY---L-PVP  477 (491)
Q Consensus       417 eRfl~~~~------------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~--~~---~-~~~  477 (491)
                      |||++.+.            .+..++|||+|+|.|||++||++|+++++|.|+++|+|++.++.. ..  ..   . .+.
T Consensus       393 eRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  472 (491)
T 3dax_A          393 DRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGIL  472 (491)
T ss_dssp             TTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEEC
T ss_pred             ccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCccccccccc
Confidence            99996431            246799999999999999999999999999999999999876531 12  11   1 157


Q ss_pred             CCCCCCeEEEecc
Q 011210          478 RPSDQCLAKVVGF  490 (491)
Q Consensus       478 ~~~~~~~~~~~~~  490 (491)
                      .|..++.+++++.
T Consensus       473 ~p~~~~~~~~r~~  485 (491)
T 3dax_A          473 PPLNDIEFKYKFK  485 (491)
T ss_dssp             CBSSCCEEEEEEC
T ss_pred             CCCCCceEEEEec
Confidence            8889999998864


No 26 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=2.6e-65  Score=496.39  Aligned_cols=392  Identities=21%  Similarity=0.317  Sum_probs=314.4

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccccccccc
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYPTS  122 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~  122 (491)
                      +.||||+++|++|++.....    .+++.++.++ ++||+  |+++++ ++.++++++||+.+++++.++ .+.+.....
T Consensus        26 ~~~PGP~~~p~lG~~~~~~~----~~p~~~~~~l-~~yGp--v~~~~~~~~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~   97 (436)
T 2cd8_A           26 QGTTASPPVLDLGALGQDFA----ADPYPTYARL-RAEGP--AHRVRTPEGDEVWLVVGYDRARAVLADP-RFSKDWRNS   97 (436)
T ss_dssp             --------CCBHHHHHHHHH----HCCHHHHHHH-HTTCS--EEEEECSSCCEEEEECSHHHHHHHHHCT-TEECCGGGC
T ss_pred             cCCCCCCccccCCCCCcccc----cChHHHHHHH-HHhCC--eeeeccCCCCeEEEEcCHHHHHHHHcCC-CCccccccc
Confidence            66899999999999863322    4799999999 99999  999998 778899999999999999887 444332111


Q ss_pred             ccc-----cccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh-cCCCCeehHHHH-HHHHHHH
Q 011210          123 TNK-----LTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA-SLDTPIEFLTEM-RKATFKI  195 (491)
Q Consensus       123 ~~~-----~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~vdl~~~~-~~~~~~~  195 (491)
                      ...     .....+++..+|+.|+++||++.+ .|++++++.+.+.+.+.++++++.+. ..++++|+..++ ..+++++
T Consensus        98 ~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~v  176 (436)
T 2cd8_A           98 TTPLTEAEAALNHNMLESDPPRHTRLRKLVAR-EFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITV  176 (436)
T ss_dssp             SSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGG-GSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHH
T ss_pred             ccccccccccccccccccCchHHHHHHHHhHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence            111     112356777899999999999999 99999999999999999999999986 424589999987 5799999


Q ss_pred             HHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHH
Q 011210          196 IANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLL  275 (491)
Q Consensus       196 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l  275 (491)
                      ++. +||.+.++ ...+.+....+.    . ..  .+    .+..++...+.+++.+.|++++++.      .+|+++.+
T Consensus       177 i~~-~~G~~~~~-~~~~~~~~~~~~----~-~~--~~----~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~l  237 (436)
T 2cd8_A          177 ISE-LLGVPEPD-RAAFRVWTDAFV----F-PD--DP----AQAQTAMAEMSGYLSRLIDSKRGQD------GEDLLSAL  237 (436)
T ss_dssp             HHH-HHTCCGGG-HHHHHHHHHHHH----S-CS--ST----THHHHHHHHHHHHHHHHHHHHTTSC------CCSHHHHH
T ss_pred             HHH-HhCCCHHH-HHHHHHHHHHHh----c-cC--CH----HHHHHHHHHHHHHHHHHHHHHhcCC------CCCHHHHH
Confidence            998 69998643 223333333222    2 11  11    4566778888999999998877542      46899999


Q ss_pred             HhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHH
Q 011210          276 MEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEY  355 (491)
Q Consensus       276 l~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~  355 (491)
                      ++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                      .|
T Consensus       238 l~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~----------------------~~  295 (436)
T 2cd8_A          238 VRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM----------------------TL  295 (436)
T ss_dssp             HHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG----------------------GG
T ss_pred             HHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh----------------------hh
Confidence            98765545579999999999999999999999999999999999999999999984                      26


Q ss_pred             HHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 011210          356 LAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGG  434 (491)
Q Consensus       356 l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~  434 (491)
                      |+|||+|+||++|+++ +++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.
T Consensus       296 l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~~pFG~  369 (436)
T 2cd8_A          296 LDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRD------TAGHLAFGH  369 (436)
T ss_dssp             HHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCC
T ss_pred             HHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCC------CCCCCCCCC
Confidence            8999999999999999 789999999999999999999999999999999999999999999995      357999999


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCcccc--ccCCCCCCCeEEEeccC
Q 011210          435 GSRICPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEYL--PVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       435 G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  491 (491)
                      |+|.|+|++||++|++++++.|+++| ++++..++.+..+.  ...++..+++|++++|+
T Consensus       370 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  429 (436)
T 2cd8_A          370 GIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGR  429 (436)
T ss_dssp             STTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC-----
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCc
Confidence            99999999999999999999999999 69986443333333  35688899999999874


No 27 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=6.9e-65  Score=491.97  Aligned_cols=401  Identities=16%  Similarity=0.226  Sum_probs=328.4

Q ss_pred             CCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHc-CCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccc--ccc-
Q 011210           46 PPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERY-GRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMG--YPT-  121 (491)
Q Consensus        46 pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~y-G~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~--~~~-  121 (491)
                      ||||   |++||++.+..     +++.++.+++++| ||  |+++.+++.+++++++|+.++ ++.+++.|.+.  ++. 
T Consensus         4 pPg~---P~iG~~~~~~~-----~p~~~~~~l~~~y~gp--v~~~~~~g~~~~vv~~~~~~~-~l~~~~~f~~~~~~~~~   72 (415)
T 3awm_A            4 TPHT---KGPDETLSLLA-----DPYRFISRQCQRLGAN--AFESRFLLKKTNCLKGAKAAE-IFYDTTRFEREGAMPVA   72 (415)
T ss_dssp             --------CCCCHHHHHH-----STTTHHHHHHHHHTSS--EEEEEETTEEEEEEESHHHHH-HHTCTTTEECTTCSCHH
T ss_pred             CCCC---CccchHHHHHh-----ChHHHHHHHHHHhCCC--eEEEecCCCcEEEEeCHHHHH-HHhcccccccccccchh
Confidence            5666   89999999875     7999999999999 78  999998888999999999987 66665544432  221 


Q ss_pred             cccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhc
Q 011210          122 STNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFL  201 (491)
Q Consensus       122 ~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~f  201 (491)
                      ....++|..+++..+|+.|+++|+++.+ .|+++.++.+.+.+.+.++++++.|.+++ ++|+.+++..+++++++++ |
T Consensus        73 ~~~~~~g~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~~~~~~-~vdl~~~~~~~~~~vi~~~-~  149 (415)
T 3awm_A           73 IQKTLLGQGGVQGLDGETHRHRKQMFMG-LMTPERVRALAQLFEAEWRRAVPGWTRKG-EIVFYDELHEPLTRAVCAW-A  149 (415)
T ss_dssp             HHTTTSCSSSGGGCCHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHHHHHS-EEEHHHHHHHHHHHHHHHH-H
T ss_pred             hhhhccCCcceeecCcHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHhhccCC-cEeHHHHHHHHHHHHHHHH-c
Confidence            1233456567778899999999999999 99999999999999999999999997655 8999999999999999999 7


Q ss_pred             CCCCchh-hhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhh
Q 011210          202 GSSSDSV-IGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVED  280 (491)
Q Consensus       202 G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~  280 (491)
                      |.+.++. ...+.+.+..+...+.    .  +.....+..++.+.+.+++.+.|++++++...  ..++|+++.+++..+
T Consensus       150 G~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--~~~~d~l~~ll~~~~  221 (415)
T 3awm_A          150 GVPLPDDEAGNRAGELRALFDAAG----S--ASPRHLWSRLARRRVDAWAKRIIEGIRAGSIG--SGSGTAAYAIAWHRD  221 (415)
T ss_dssp             TCCCCGGGHHHHHHHHHHHHHSTT----C--SSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC--CCTTSHHHHHHHCBC
T ss_pred             CCCCCcchHHHHHHHHHHHHHHhc----c--cCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCCCHHHHHHhhhh
Confidence            9986542 1233333333333221    1  12234566778888999999999988765321  125689999998765


Q ss_pred             hcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHH
Q 011210          281 ENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVI  360 (491)
Q Consensus       281 ~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i  360 (491)
                      +++..++++++.+++..++ ||++||+++++|++++|++||++|+++++|                      +|||++||
T Consensus       222 ~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e----------------------~~~l~a~i  278 (415)
T 3awm_A          222 RHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ----------------------PDYAELFV  278 (415)
T ss_dssp             TTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC----------------------TTHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH----------------------HHHHHHHH
Confidence            5566688888887776654 899999999999999999999999999986                      37999999


Q ss_pred             HHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCC----C
Q 011210          361 AETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGG----S  436 (491)
Q Consensus       361 ~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G----~  436 (491)
                      +|+||++|+++.++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||++.+.....++|||+|    +
T Consensus       279 ~E~lRl~p~~~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G~r~~~  358 (415)
T 3awm_A          279 QEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLG  358 (415)
T ss_dssp             HHHHHHSCCSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCCCSSSCCTTCCSCTTTS
T ss_pred             HHHhhcCCCccccceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCCCCCCccCCCCCCCCCC
Confidence            999999999999899999999999999999999999999999999999999999999999765556789999999    5


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcCeEeccCCCCCcccc-ccCCCCCCCeEEEeccC
Q 011210          437 RICPGADLAKLEISIFIHYFLLNYKLELQNPECPAEYL-PVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       437 r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  491 (491)
                      |.|+|++||++|++++++.|+++|++++.+++.++... .+..|.++++++++|.+
T Consensus       359 r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  414 (415)
T 3awm_A          359 HRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHIG  414 (415)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEESC
T ss_pred             CcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeCC
Confidence            99999999999999999999999999987665544433 35789999999998753


No 28 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=8.5e-65  Score=504.02  Aligned_cols=427  Identities=20%  Similarity=0.255  Sum_probs=315.9

Q ss_pred             cCCCCCCCCC-CccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcc---ccc
Q 011210           42 KHSLPPGDMG-WPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDEN---FKM  117 (491)
Q Consensus        42 ~~~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~---~~~  117 (491)
                      ..++||||++ +|++||++.+..     +++.++.+|+++||+  ||++++++.++++++||+++++++++++.   +.+
T Consensus        16 ~~~~PPgp~~~~P~iG~~~~~~~-----~~~~~~~~l~~kYG~--i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~   88 (498)
T 3b6h_A           16 RPGEPPLDLGSIPWLGYALDFGK-----DAASFLTRMKEKHGD--IFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHA   88 (498)
T ss_dssp             CTTCCCEECCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS--EEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCH
T ss_pred             CCCCCCCCCCCCcchhhHHHhcc-----CHHHHHHHHHHHcCC--eEEEEECCeeEEEEcCHHHHHHHHhCccccCCchh
Confidence            3478999998 899999998874     689999999999999  99999999999999999999999987652   222


Q ss_pred             cccccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh----cCCCCeehHHHHHHHHH
Q 011210          118 GYPTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA----SLDTPIEFLTEMRKATF  193 (491)
Q Consensus       118 ~~~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~vdl~~~~~~~~~  193 (491)
                      .........+|. +++..+++.|   |+++.+ .|+.+.++.+.+.+.+.+.+.+....    .....+++...+..+++
T Consensus        89 ~~~~~~~~~~g~-~~~~~~~~~~---rr~~~~-~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~  163 (498)
T 3b6h_A           89 YAIFLMERIFDV-QLPHYSPSDE---KARMKL-TLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLL  163 (498)
T ss_dssp             HHHHHHHHTSCC-CCTTCCHHHH---HHHHHT-TSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHcCC-CccccCHHHH---HHHHHH-hhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHH
Confidence            222223333453 3334566665   555666 77888899988888888877776542    12225789999999999


Q ss_pred             HHHHHHhcCCCCchhhh----hHHHHHHHHHhc---ccCCCCC----CCCCcchHHHHHHHHHHHHHhHHHHHHHHHchh
Q 011210          194 KIIANIFLGSSSDSVIG----SVEKHYIDYAHG---LISPFPI----NLPGFSFHKAMKARDMLGEILQPVLNERRAMKS  262 (491)
Q Consensus       194 ~~~~~~~fG~~~~~~~~----~~~~~~~~~~~~---~~~~~~~----~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (491)
                      ++++..+||.+.+....    .....+..+...   +...+|.    +++....++..++.+.+.+.+.   +++.++. 
T Consensus       164 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-  239 (498)
T 3b6h_A          164 RAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLS---PARLARR-  239 (498)
T ss_dssp             HHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTC---HHHHTTC-
T ss_pred             HHHHHhhcCcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHH---HHHHhcc-
Confidence            99999999987532111    011111111111   1111221    1121111123333333333222   2222211 


Q ss_pred             hhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCC-
Q 011210          263 DEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPST-  341 (491)
Q Consensus       263 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~-  341 (491)
                         ....|+++.+++..++.+ .++++++. .++.+++||++||+++++|++++|++||++|+|+++|++++++..... 
T Consensus       240 ---~~~~d~l~~ll~~~~~~~-~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~  314 (498)
T 3b6h_A          240 ---AHRSKWLESYLLHLEEMG-VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPV  314 (498)
T ss_dssp             ---BSCCHHHHHHHHHHHHTT-CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-----
T ss_pred             ---ccHHHHHHHHHHHHHhCC-CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCC
Confidence               115689999998765543 46777777 888889999999999999999999999999999999999999853210 


Q ss_pred             --CCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee-----CCeEeCCCCEEEEcccc-cccCCCCCCCCCC
Q 011210          342 --QKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI-----QGYFIPKGWKVLVYNRG-VHYNPENYPDPKQ  413 (491)
Q Consensus       342 --~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~  413 (491)
                        ...++.+++++||||+|||+|+||++|+ +.++|.+.+|+++     +||.|||||.|+++.++ +|+||++|+||++
T Consensus       315 ~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~  393 (498)
T 3b6h_A          315 SQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEV  393 (498)
T ss_dssp             -----CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTS
T ss_pred             CcccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhh
Confidence              0126899999999999999999999985 6789999999998     68999999999999999 9999999999999


Q ss_pred             CCCCCCCCCCC------------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCCC---Ccc---cc-
Q 011210          414 FDPSRWDNHTT------------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPEC---PAE---YL-  474 (491)
Q Consensus       414 F~PeRfl~~~~------------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~---~~-  474 (491)
                      |+||||++.+.            .+..++|||+|+|.|||+.||++|++++++.|+++|||++.+++.   ...   .. 
T Consensus       394 F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  473 (498)
T 3b6h_A          394 FKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGF  473 (498)
T ss_dssp             CCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBS
T ss_pred             cCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCcccccc
Confidence            99999996431            246799999999999999999999999999999999999876531   111   11 


Q ss_pred             ccCCCCCCCeEEEecc
Q 011210          475 PVPRPSDQCLAKVVGF  490 (491)
Q Consensus       475 ~~~~~~~~~~~~~~~~  490 (491)
                      .+..|..+++|++++|
T Consensus       474 ~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          474 GLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             SBCCBSSCCEEEEEEC
T ss_pred             ccCCCCCCccEEEEec
Confidence            2467888999999886


No 29 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1.7e-65  Score=506.29  Aligned_cols=420  Identities=16%  Similarity=0.189  Sum_probs=308.4

Q ss_pred             CCCCCCCCC-CccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccc--ccc
Q 011210           43 HSLPPGDMG-WPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFK--MGY  119 (491)
Q Consensus        43 ~~~pPgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~--~~~  119 (491)
                      .+.||||++ ||++||++.+..     +++.++.+++++||+  ||++++++.+++++++|+.+++++++++.+.  ...
T Consensus        17 ~~~pPgp~~~~P~iG~~~~~~~-----~~~~~~~~l~~~yG~--v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~~   89 (475)
T 3b98_A           17 RNEPPLDKGMIPWLGHALEFGK-----DAAKFLTRMKEKHGD--IFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSYA   89 (475)
T ss_dssp             TTCCCEECCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCS--EEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHHH
T ss_pred             CCCCCCCCCCcchHHhHHHHhh-----CHHHHHHHHHHHhCC--eEEEEECCceEEEEeCHHHHHHHHcCcccCCchHHH
Confidence            468999998 899999998864     799999999999999  9999999999999999999999998865322  111


Q ss_pred             cccccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcC-----CCCeehHHHHHHHHHH
Q 011210          120 PTSTNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASL-----DTPIEFLTEMRKATFK  194 (491)
Q Consensus       120 ~~~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~vdl~~~~~~~~~~  194 (491)
                      .......+|. +++..+++.|   |+++.+ .|+++.+..+.+.+.+++.++++.+...     ...+++...+..++++
T Consensus        90 ~~~~~~~~g~-~~~~~~~~~~---R~~~~~-~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (475)
T 3b98_A           90 QVLMKRIFNM-ILPSHNPESE---KKRAEM-HFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK  164 (475)
T ss_dssp             HHHHHHTTCC-CCTTCCHHHH---HHHHHH-HTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhCC-CCCCCChHHH---HHHHHH-HcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence            1222333453 3445566554   677777 8899999999999999999998876322     1247889999999999


Q ss_pred             HHHHHhcCCCCch--hhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHH
Q 011210          195 IIANIFLGSSSDS--VIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLI  272 (491)
Q Consensus       195 ~~~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (491)
                      +++...||.+.+.  ....+.+.+..+...+......+++....+...+..+.+.+.+.   +++.+.    .....|++
T Consensus       165 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~d~l  237 (475)
T 3b98_A          165 TGYLTVFGAENNNSAALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLT---PSGLDR----KPREQSWL  237 (475)
T ss_dssp             HHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHS---CTTSCC----CCCTTSHH
T ss_pred             HhhhheeCCccccchhcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHHH---HHHhhc----cccccHHH
Confidence            9999999976322  11222222222211111100011221111122222222222211   111111    11257999


Q ss_pred             HHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 011210          273 DLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQ  352 (491)
Q Consensus       273 ~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~  352 (491)
                      +.+++..++++ .++++++. +++.+++||+|||+++++|++++|++||++|++|++|++  .+    ... ++.+++++
T Consensus       238 ~~ll~~~~~~~-~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~----~~~-~~~~~~~~  308 (475)
T 3b98_A          238 GSYVKQLQDEG-IDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG----KHL-RLEERQKN  308 (475)
T ss_dssp             HHHHHHHHHTT-CCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-------------------C
T ss_pred             HHHHHHHHHcC-CCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC----CCC-CCHHHHhc
Confidence            99998765443 57888888 899999999999999999999999999999999999998  22    122 68999999


Q ss_pred             cHHHHHHHHHhcccCCCCCCcceeeccccee-----CCeEeCCCCEEEEcccc-cccCCCCCCCCCCCCCCCCCCCCC--
Q 011210          353 MEYLAKVIAETLRMTNLSPSSFREAEADVNI-----QGYFIPKGWKVLVYNRG-VHYNPENYPDPKQFDPSRWDNHTT--  424 (491)
Q Consensus       353 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-----~g~~ip~G~~v~~~~~~-~~~d~~~~~~p~~F~PeRfl~~~~--  424 (491)
                      ||||+|||+|+||++|+ +.++|.+.+|+++     +||.||||+.|+++.++ +||||++|+||++|+||||++.+.  
T Consensus       309 lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~  387 (475)
T 3b98_A          309 TPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTE  387 (475)
T ss_dssp             CHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCB
T ss_pred             CHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCc
Confidence            99999999999999987 6789999999999     88999999999999999 999999999999999999996431  


Q ss_pred             ----------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCCC-CCccc-----c-ccCCCCCCCeEEE
Q 011210          425 ----------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNPE-CPAEY-----L-PVPRPSDQCLAKV  487 (491)
Q Consensus       425 ----------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~-----~-~~~~~~~~~~~~~  487 (491)
                                ....++|||+|+|.|+|++||++|++++++.|+++|++++.++. .....     . .+..|..+++|++
T Consensus       388 ~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  467 (475)
T 3b98_A          388 KKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRY  467 (475)
T ss_dssp             CCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEE
T ss_pred             cccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEE
Confidence                      24679999999999999999999999999999999999987653 11111     1 2567889999999


Q ss_pred             eccC
Q 011210          488 VGFK  491 (491)
Q Consensus       488 ~~~~  491 (491)
                      ++|+
T Consensus       468 ~~R~  471 (475)
T 3b98_A          468 RIRF  471 (475)
T ss_dssp             EEC-
T ss_pred             Eecc
Confidence            9884


No 30 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1e-63  Score=481.20  Aligned_cols=383  Identities=19%  Similarity=0.240  Sum_probs=314.3

Q ss_pred             CCcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEee----e-CC-CcEEEEeChHhHhHHh-cCC
Q 011210           40 EMKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNH----I-FG-SPCVIVVAPEACKQVF-LDD  112 (491)
Q Consensus        40 ~~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~----~-~~-~~~vvv~~~~~~~~i~-~~~  112 (491)
                      +...++||||+++|+.     +.     ++++.++.+| ++||+  |++++    + ++ .++++++||+.+++++ .++
T Consensus         6 ~~~~~lppgp~~~p~~-----~~-----~~p~~~~~~l-~~yGp--v~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~   72 (406)
T 1ued_A            6 DQVAPLLREPANFQLR-----TN-----CDPHEDNFGL-RAHGP--LVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE   72 (406)
T ss_dssp             CSCCCEEECCTTTTCE-----ET-----TEECHHHHHH-HTTCS--EEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS
T ss_pred             CCCCCCcccCcccCCC-----CC-----CCcHHHHHHH-HHhCC--eeeecccccCCCCCccEEEEcCHHHHHHHHhhCc
Confidence            3456889999999987     22     4789999999 99999  99999    7 78 8999999999999999 655


Q ss_pred             cccccccc-c----ccc-ccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHH
Q 011210          113 ENFKMGYP-T----STN-KLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLT  186 (491)
Q Consensus       113 ~~~~~~~~-~----~~~-~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~  186 (491)
                      + +.+... .    .+. ......+++..+|+.|+++||++.+ .|++++++.+.+.+.++++++++.+...++++|+..
T Consensus        73 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~  150 (406)
T 1ued_A           73 H-FTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTP-EFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQG  150 (406)
T ss_dssp             S-EECCCCC---------CGGGTTCGGGCCTTHHHHHHHHHGG-GSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHH
T ss_pred             c-ccccccccccccccccccccccccccCCCHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHH
Confidence            4 322211 0    111 1112246777899999999999999 999999999999999999999999865344899999


Q ss_pred             HHHH-HHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhc
Q 011210          187 EMRK-ATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQ  265 (491)
Q Consensus       187 ~~~~-~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~  265 (491)
                      ++.. ++.++++ .+||.+.++ ...+    ......+.. .  .   ....+..++.+.+.+++.+.+++++++.    
T Consensus       151 ~~~~~~~~~vi~-~~~G~~~~~-~~~~----~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~----  214 (406)
T 1ued_A          151 LFADPVGAHALC-ELLGIPRDD-QREF----VRRIRRNAD-L--S---RGLKARAADSAAFNRYLDNLLARQRADP----  214 (406)
T ss_dssp             HTHHHHHHHHHH-HHHTCCHHH-HHHH----HHHHHHCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHSC----
T ss_pred             HHHHHhHHHHHH-HHcCCCHHH-HHHH----HHHHHHHHh-c--c---CCHHHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence            8875 9999999 579987532 1222    222222222 1  1   1234567778889999999999887642    


Q ss_pred             cccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCC
Q 011210          266 KGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGL  345 (491)
Q Consensus       266 ~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~  345 (491)
                        .+|+++.+++..   +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+.             
T Consensus       215 --~~d~l~~ll~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------------  276 (406)
T 1ued_A          215 --DDGLLGMIVRDH---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-------------  276 (406)
T ss_dssp             --CSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-------------
T ss_pred             --CCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-------------
Confidence              468999999865   23589999999999999999999999999999999999999999999853             


Q ss_pred             CHHHHhccHHHHHHHHHhcccCCCCCC-cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC
Q 011210          346 TIEEIKQMEYLAKVIAETLRMTNLSPS-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT  424 (491)
Q Consensus       346 ~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~  424 (491)
                               |++|||+|+||++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||     
T Consensus       277 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~-----  342 (406)
T 1ued_A          277 ---------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA-----  342 (406)
T ss_dssp             ---------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC-----
T ss_pred             ---------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCC-----
Confidence                     589999999999999995 89999999999999999999999999999999999999999999997     


Q ss_pred             CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCccc--cccCCCCCCCeEEE
Q 011210          425 RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKV  487 (491)
Q Consensus       425 ~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  487 (491)
                       ...++|||.|+|.|+|++||++|++++++.|+++| ++++.+++.+..+  ..+.++ ++++|++
T Consensus       343 -~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          343 -AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             -CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             -CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence             35799999999999999999999999999999999 7998755433433  346788 9999874


No 31 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=8.1e-63  Score=475.72  Aligned_cols=387  Identities=16%  Similarity=0.194  Sum_probs=310.8

Q ss_pred             CCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeC-CCcEEEEeChHhHhHHhcCCc-ccccccccc
Q 011210           45 LPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIF-GSPCVIVVAPEACKQVFLDDE-NFKMGYPTS  122 (491)
Q Consensus        45 ~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~-~~~~vvv~~~~~~~~i~~~~~-~~~~~~~~~  122 (491)
                      +||||+++|++|++.        .+++..+.+|+ +||+  |+++.++ |.+.++|++++.+++++.+++ ......+..
T Consensus         2 ~pPGp~~~P~~g~~~--------~~p~~~~~~l~-~~Gp--v~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~   70 (404)
T 1jfb_A            2 MASGAPSFPFSRASG--------PEPPAEFAKLR-ATNP--VSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGF   70 (404)
T ss_dssp             ----CCBSSCCCSST--------TSCCTHHHHHH-HHCS--EEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTC
T ss_pred             CCCCCCCCCCCCCcC--------CCccHHHHHHH-HhCC--eeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCC
Confidence            589999999999974        27888998885 6999  9999875 677888999999999998874 111111111


Q ss_pred             --cc-----ccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcC---CCCeehHHHHHHHH
Q 011210          123 --TN-----KLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASL---DTPIEFLTEMRKAT  192 (491)
Q Consensus       123 --~~-----~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~vdl~~~~~~~~  192 (491)
                        ..     ...|..+++..+|+.|+++||++++ .|++++++.+.+.+.++++++++.+...   ++++|+...+...+
T Consensus        71 ~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~  149 (404)
T 1jfb_A           71 PELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEP-TFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPV  149 (404)
T ss_dssp             CCCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGG-GGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHH
T ss_pred             ccccccccchhcccCcccccCchhHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHH
Confidence              10     1224356777899999999999999 9999999999999999999999998532   34799999999999


Q ss_pred             HHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHH
Q 011210          193 FKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLI  272 (491)
Q Consensus       193 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (491)
                      .++++..+||.+.++.  ++.......   +..    +.+  ...+..++...+.+++.+.+++++++.      .+|++
T Consensus       150 ~~~i~~~~~G~~~~~~--~~~~~~~~~---~~~----~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l  212 (404)
T 1jfb_A          150 PSYIIYTLLGVPFNDL--EYLTQQNAI---RTN----GSS--TAREASAANQELLDYLAILVEQRLVEP------KDDII  212 (404)
T ss_dssp             HHHHHHHHHTCCGGGH--HHHHHHHHH---HHC----TTS--CHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHH
T ss_pred             HHHHHHHHcCCCHHHH--HHHHHHHHH---Hhc----cCc--chHHHHHHHHHHHHHHHHHHHHHHhCC------CCcHH
Confidence            9999999999986531  222222111   111    112  234566777888999999998887642      56999


Q ss_pred             HHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 011210          273 DLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQ  352 (491)
Q Consensus       273 ~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~  352 (491)
                      +.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+|++++                      
T Consensus       213 ~~ll~~~~~-~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~----------------------  269 (404)
T 1jfb_A          213 SKLCTEQVK-PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN----------------------  269 (404)
T ss_dssp             HHHHHHTTT-TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC----------------------
T ss_pred             HHHHHhhcc-CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC----------------------
Confidence            999975432 336899999999999999999999999999999999999999999883                      


Q ss_pred             cHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 011210          353 MEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIP  431 (491)
Q Consensus       353 lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~  431 (491)
                      .+|++|||+|+||++|+++ +++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||++.    ..++|
T Consensus       270 ~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~----~~~~~  345 (404)
T 1jfb_A          270 PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP----QDPLG  345 (404)
T ss_dssp             GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS----SCCCT
T ss_pred             hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC----CCCCC
Confidence            2699999999999999999 689999999999999999999999999999999999999999999998753    35999


Q ss_pred             ccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCcccc--ccCCCCCCCeEEE
Q 011210          432 FGGGSRICPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEYL--PVPRPSDQCLAKV  487 (491)
Q Consensus       432 Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~--~~~~~~~~~~~~~  487 (491)
                      ||.|+|.|+|++||++|++++++.|+++| ++++.++..+..+.  ...+....+||++
T Consensus       346 Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~  404 (404)
T 1jfb_A          346 FGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVIF  404 (404)
T ss_dssp             TCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEEC
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCCcccccccccccccCcccceeeC
Confidence            99999999999999999999999999999 79987554433333  3456666666653


No 32 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.5e-64  Score=484.73  Aligned_cols=377  Identities=20%  Similarity=0.245  Sum_probs=307.8

Q ss_pred             CCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccc--cccccc
Q 011210           48 GDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGY--PTSTNK  125 (491)
Q Consensus        48 gp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~--~~~~~~  125 (491)
                      ++..+|++||++++..     +++.++.+++++||+  |++ ++++.++++++||+.+++++.++ .+.+..  ......
T Consensus         3 ~~~~~p~iGnl~~~~~-----~p~~~~~~l~~~yGp--v~~-~~g~~~~vvv~~~~~i~~il~~~-~f~~~~~~~~~~~~   73 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQ-----DPLAVLLAWGRAHPR--LFL-PLPRFPLALIFDPEGVEGALLAE-GTTKATFQYRALSR   73 (389)
T ss_dssp             ECCHHHHHHHHHHHHH-----CHHHHHHHHHHHCSE--EEE-CCTTCCEEEECSHHHHHHHHHCT-TEECCSHHHHHHHH
T ss_pred             ccccccccccHHHHhh-----ChHHHHHHHHHHcCC--eeE-ecCCccEEEECCHHHHHHHHhcC-CCCCChhHHHHHHH
Confidence            4457899999998864     789999999999999  999 88888999999999999999887 555442  112223


Q ss_pred             cccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhcCCCC
Q 011210          126 LTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFLGSSS  205 (491)
Q Consensus       126 ~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  205 (491)
                      +.| .+++..+|+.|+++||++.+ .|++++++.+.+.+.+.++++++.+. + +++|+.+++..++++++++++||.+.
T Consensus        74 ~~g-~~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~-~-~~~dl~~~~~~~~~~vi~~~~fG~~~  149 (389)
T 1n97_A           74 LTG-RGLLTDWGESWKEARKALKD-PFLPKNVRGYREAMEEEARAFFGEWR-G-EERDLDHEMLALSLRLLGRALFGKPL  149 (389)
T ss_dssp             HHC-SSTTTCCHHHHHHHHHHHCG-GGSHHHHHTTHHHHHHHHHHHHHTCC-S-CCEEHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             HhC-CccccCCcHHHHHHHHHhCc-ccCHHHHHHHHHHHHHHHHHHHHHcc-C-CcCcHHHHHHHHHHHHHHHHHcCCcc
Confidence            345 56777899999999999999 99999999999999999999999987 4 48999999999999999999999987


Q ss_pred             chhhhhHHHHHHHHHhcc----cCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhh
Q 011210          206 DSVIGSVEKHYIDYAHGL----ISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDE  281 (491)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~  281 (491)
                      ++   ++.+.+..+....    ..++ .++|.....+..++.+.+.+++.+.++++                 ++     
T Consensus       150 ~~---~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r-----------------ll-----  203 (389)
T 1n97_A          150 SP---SLAEHALKALDRIMAQTRSPL-ALLDLAAEARFRKDRGALYREAEALIVHP-----------------PL-----  203 (389)
T ss_dssp             CH---HHHHHHHHHHHHHHHHHHCGG-GGGCHHHHHHHHHHHHHHHHHHGGGTTST-----------------TG-----
T ss_pred             hH---HHHHHHHHHHHHHHHHHhhHH-HhcCCchhHHHHHHHHHHHHHHHHHHHHH-----------------hc-----
Confidence            63   3444433333221    1111 22332222333344444444444433321                 22     


Q ss_pred             cCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHH
Q 011210          282 NGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIA  361 (491)
Q Consensus       282 ~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  361 (491)
                        ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++.+                      .|||+
T Consensus       204 --~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~----------------------~a~i~  259 (389)
T 1n97_A          204 --SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA----------------------LAAFQ  259 (389)
T ss_dssp             --GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH----------------------HHHHH
T ss_pred             --ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH----------------------HHHHH
Confidence              148999999999999999999999999999999999999999999999865                      29999


Q ss_pred             HhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCC-CCCCCCcccccCCCCCCc
Q 011210          362 ETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNH-TTRPGSFIPFGGGSRICP  440 (491)
Q Consensus       362 E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~-~~~~~~~~~Fg~G~r~C~  440 (491)
                      |+||++|+++.++|.+.+|++++|+.||||+.|.++.+++|||  +|+||++|+||||++. ......++|||.|+|.|+
T Consensus       260 E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~~~~~~~~~~FG~G~r~C~  337 (389)
T 1n97_A          260 EALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCL  337 (389)
T ss_dssp             HHHHHSCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCCCCBTTBCTTCCSTTCCT
T ss_pred             HHHhcCCCccccceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCCCCCCCCccCCCCCCCCCc
Confidence            9999999999889999999999999999999999999999999  9999999999999864 234568999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhcCeEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          441 GADLAKLEISIFIHYFLLNYKLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       441 G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      |++||++|++++++.|+++|++++.++... ....+.+|.++++|++++|
T Consensus       338 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          338 GRDFALLEGPIVLRAFFRRFRLDPLPFPRV-LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             THHHHHHHHHHHHHHHHTTCBCCCCCCCCE-EESSSEEETTCCEECCBC-
T ss_pred             hHHHHHHHHHHHHHHHHHhceEEeCCCCcc-cceEEeeeCCCceEEEeec
Confidence            999999999999999999999998755433 3345788889999999876


No 33 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=8.5e-63  Score=478.48  Aligned_cols=400  Identities=19%  Similarity=0.243  Sum_probs=316.4

Q ss_pred             CCCCCCCCCCccccccHHHHhhhhc-CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccccccc
Q 011210           43 HSLPPGDMGWPLVGNMLSHQKAFKS-SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYP  120 (491)
Q Consensus        43 ~~~pPgp~~~P~~G~~~~~~~~~~~-~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~  120 (491)
                      .++|||     ++|++.+... +.. .+++.++.++++ |||  |+++++ |+.+++++++++.+++++++++.|.++..
T Consensus         5 ~~~pp~-----~~g~l~~~~~-~~~~~~p~~~~~~l~~-~gp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~~~fs~r~~   75 (428)
T 1cpt_A            5 ATIPEH-----IARTVILPQG-YADDEVIYPAFKWLRD-EQP--LAMAHIEGYDPMWIATKHADVMQIGKQPGLFSNAEG   75 (428)
T ss_dssp             CCSCHH-----HHHHHHSSGG-GGCHHHHHHHHHHHHH-HCS--EEEECCTTSCCEEEECSHHHHHHHHHCTTTEESSSS
T ss_pred             cccchh-----hhcccCChhh-hcccCCccHHHHHHHH-hCC--eeeccccCCCCeEEEccHHHHHHHHcCchhccCccc
Confidence            478888     8897654421 111 358889988876 789  999998 67899999999999999987665554432


Q ss_pred             -cccc-----c-c---cc-----ccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehH
Q 011210          121 -TSTN-----K-L---TF-----RGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFL  185 (491)
Q Consensus       121 -~~~~-----~-~---~g-----~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~  185 (491)
                       ..+.     . +   .|     ..+++..+|+.|+++||++++ .|++++++.+.+.+.++++++++.+...++++|+.
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~  154 (428)
T 1cpt_A           76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLN-WFQPASIRKLEENIRRIAQASVQRLLDFDGECDFM  154 (428)
T ss_dssp             CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHT-TSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEHH
T ss_pred             cccCCcccccchhccccccccccccccccCChHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehH
Confidence             1111     1 2   33     246777899999999999999 99999999999999999999999997653389998


Q ss_pred             HHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccC---CCCC--CCCCcchHHHHHHHHHHHHHhHHHHHHHHH
Q 011210          186 TEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLIS---PFPI--NLPGFSFHKAMKARDMLGEILQPVLNERRA  259 (491)
Q Consensus       186 ~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~  259 (491)
                      ..+ ..+++++++.+ ||.+.++. ..+.+....+......   .+|+  ..+...+++..++.+.+.+++.+.|+++++
T Consensus       155 ~~~~~~~~~~vi~~~-fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~  232 (428)
T 1cpt_A          155 TDCALYYPLHVVMTA-LGVPEDDE-PLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRS  232 (428)
T ss_dssp             HHTTTTHHHHHHHHH-HTCCGGGH-HHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhhhHHHHHHHH-cCCCHhHH-HHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            655 67999999999 99986542 2232222221111000   0111  000011235667778888999999988775


Q ss_pred             chhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCC
Q 011210          260 MKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRP  339 (491)
Q Consensus       260 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~  339 (491)
                      +.      .+|+++.+++..+ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++       
T Consensus       233 ~~------~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------  298 (428)
T 1cpt_A          233 CP------KDDVMSLLANSKL-DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA-------  298 (428)
T ss_dssp             SC------CSSHHHHHHHCBS-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------
T ss_pred             CC------CCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH-------
Confidence            31      4699999998753 444699999999999999999999999999999999999999999999953       


Q ss_pred             CCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCC
Q 011210          340 STQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRW  419 (491)
Q Consensus       340 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRf  419 (491)
                                     |++|||+|+||++|++++++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+||||
T Consensus       299 ---------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~  363 (428)
T 1cpt_A          299 ---------------LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF  363 (428)
T ss_dssp             ---------------GHHHHHHHHHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCC
T ss_pred             ---------------HHHHHHHHHHHhCCcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCC
Confidence                           78999999999999999889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCe-EeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          420 DNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYK-LELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       420 l~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      .+      .++|||.|+|.|+|++||++|++++++.|+++|+ +++.+ +..+......+...+++|+++++
T Consensus       364 ~~------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          364 PN------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG-PPRLVATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             SC------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS-CCEECCCSSBCSEEECEEEEEEC
T ss_pred             CC------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC-CcccccCccccCcceeeEEeeCC
Confidence            42      4999999999999999999999999999999997 88763 33333344667778899999875


No 34 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=4.3e-62  Score=470.66  Aligned_cols=375  Identities=21%  Similarity=0.296  Sum_probs=308.1

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccccc-------ccccccccceeeccchhH
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTS-------TNKLTFRGSFITASKEGQ  140 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~g~~~l~~~~g~~~  140 (491)
                      .+++.++.++ ++|||  |+++++++.+++++++|+.+++++.+++.+.+.....       .....| .+++..+|+.|
T Consensus        13 ~~p~~~~~~~-r~yGp--v~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~~h   88 (404)
T 3ejb_B           13 KNPYSFYDTL-RAVHP--IYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQN-QMMLFQNQPDH   88 (404)
T ss_dssp             HCHHHHHHHH-HHHCS--EEEEEETTEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHH-TSGGGCCTTHH
T ss_pred             cCchHHHHHH-HhhCC--EeeccCCCCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhh-cchhhcCCchH
Confidence            3899999888 68999  9999999999999999999999999876555433211       112223 56777899999


Q ss_pred             HHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhHHHHHHHH
Q 011210          141 KRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSVEKHYIDY  219 (491)
Q Consensus       141 ~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~  219 (491)
                      +++||++.+ .|++++++.+.+.+.+.++++++.+.+++ .+|+...+. .++.++++.+ ||.+.++. ..+.+....+
T Consensus        89 ~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~~~~~~  164 (404)
T 3ejb_B           89 RRLRTLASG-AFTPRTTESYQPYIIETVHHLLDQVQGKK-KMEVISDFAFPLASFVIANI-IGVPEEDR-EQLKEWAASL  164 (404)
T ss_dssp             HHHHHHHHG-GGSHHHHHTTHHHHHHHHHHHHHTTTTTS-EEEHHHHTHHHHHHHHHHHH-HTCCGGGH-HHHHHHHHHH
T ss_pred             HHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHhhhcC-CcchHHHHHHHHHHHHHHHH-cCCCHHHH-HHHHHHHHHH
Confidence            999999999 99999999999999999999999997665 899876654 5888888884 89876442 2333333333


Q ss_pred             HhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHH
Q 011210          220 AHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFL  299 (491)
Q Consensus       220 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~  299 (491)
                      ... .. .|.  ......+..++...+.+++.+.+++++++.      .+|+++.++ .. .++..++++++.+++..++
T Consensus       165 ~~~-~~-~p~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll-~~-~~~~~ls~~el~~~~~~l~  232 (404)
T 3ejb_B          165 IQT-ID-FTR--SRKALTEGNIMAVQAMAYFKELIQKRKRHP------QQDMISMLL-KG-REKDKLTEEEAASTCILLA  232 (404)
T ss_dssp             HGG-GS-TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHH-HC-----CCCHHHHHHHHHHHH
T ss_pred             HHh-cc-CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------cchHHHHHH-hc-ccCCCCCHHHHHHHHHHHH
Confidence            222 11 121  111345567778888999999998887532      579999999 43 3445799999999999999


Q ss_pred             hcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecc
Q 011210          300 SAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEA  379 (491)
Q Consensus       300 ~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~  379 (491)
                      +||+|||+++++|++++|++||++|+|+++|++                      |+++||+|+||++|++++++|.+++
T Consensus       233 ~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~R~~~~  290 (404)
T 3ejb_B          233 IAGHETTVNLISNSVLCLLQHPEQLLKLRENPD----------------------LIGTAVEECLRYESPTQMTARVASE  290 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------------------GHHHHHHHHHHHSCSBCEEEEEESS
T ss_pred             HcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------------HHHHHHHHHHHhCCcccccceEeCC
Confidence            999999999999999999999999999999853                      6899999999999999988999999


Q ss_pred             cceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhc
Q 011210          380 DVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLN  459 (491)
Q Consensus       380 d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  459 (491)
                      |++++|+.||||+.|.++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.|+++
T Consensus       291 d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~------~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~  364 (404)
T 3ejb_B          291 DIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRS------PNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR  364 (404)
T ss_dssp             CEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCS------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCC------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999997      4568999999999999999999999999999999


Q ss_pred             C-eEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          460 Y-KLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       460 f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      | ++++.+++..+......++..++||++++|
T Consensus       365 f~~~~l~~~~~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          365 MPSLNLADFEWRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             CTTCEEC--CCCBCSCSSBCCBSCCEEECC--
T ss_pred             CcccccCCCCceeccCcccCCcceeEEEEecc
Confidence            9 999986555555566789999999999976


No 35 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=1.1e-62  Score=474.53  Aligned_cols=395  Identities=16%  Similarity=0.162  Sum_probs=320.9

Q ss_pred             CCcCCCCCCCCCCccc--cccHHHHhhhhcCCchHHHHHHHHHcC--CcceEEeeeCCCcEEEEeChHhHhHHhcCCccc
Q 011210           40 EMKHSLPPGDMGWPLV--GNMLSHQKAFKSSEPQSFIYNLFERYG--RKGIYRNHIFGSPCVIVVAPEACKQVFLDDENF  115 (491)
Q Consensus        40 ~~~~~~pPgp~~~P~~--G~~~~~~~~~~~~~~~~~~~~~~~~yG--~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~  115 (491)
                      +...++||||.+.|..  +.+-.+.......+++.++.+|+ +||  +  |++++..| +++++++++.+++++++++.|
T Consensus         7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~p--v~~~~~~g-~~vvv~~~~~v~~vl~~~~~f   82 (415)
T 2zwu_A            7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPD--LVWTRCNG-GHWIATRGQLIREAYEDYRHF   82 (415)
T ss_dssp             ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCS--EEEECGGG-CEEEECSHHHHHHHHHCTTTE
T ss_pred             cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCC--eEEecCCC-CeEEEcCHHHHHHHHcCcccc
Confidence            4456899999999875  54321111101347899999995 899  9  99998333 699999999999999876555


Q ss_pred             cccc--cccccccccccc-eeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHH
Q 011210          116 KMGY--PTSTNKLTFRGS-FITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKA  191 (491)
Q Consensus       116 ~~~~--~~~~~~~~g~~~-l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~  191 (491)
                      .+..  ........+ .+ ++..+|+.|+++||++.+ .|++.+++.+.+.+.++++++++.+...+ ++|+..++ ..+
T Consensus        83 ~~~~~~~~~~~~~~~-~~~l~~~~g~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~  159 (415)
T 2zwu_A           83 SSECPFIPREAGEAY-DFIPTSMDPPEQRQFRALANQ-VVGMPVVDKLENRIQELACSLIESLRPQG-QCNFTEDYAEPF  159 (415)
T ss_dssp             ETTSCSSSHHHHHHC-CCTTTTCCTTTTHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHHHHGGGT-EEEHHHHTTTHH
T ss_pred             CCCcccCCCCccccc-cccCccCCCcHHHHHHHHHHh-hhCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHH
Confidence            5443  111111123 45 677899999999999999 99999999999999999999999997666 89999865 789


Q ss_pred             HHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccH
Q 011210          192 TFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGL  271 (491)
Q Consensus       192 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  271 (491)
                      ++++++.+ ||.+.++ ...+.+....+...    +   .|.    +..++.+.+.+++.+.|++++++.      .+|+
T Consensus       160 ~~~vi~~~-~G~~~~~-~~~~~~~~~~~~~~----~---~P~----~~~~~~~~~~~~~~~~i~~r~~~~------~~dl  220 (415)
T 2zwu_A          160 PIRIFMLL-AGLPEED-IPHLKYLTDQMTRP----D---GSM----TFAEAKEALYDYLIPIIEQRRQKP------GTDA  220 (415)
T ss_dssp             HHHHHHHH-HTCCGGG-HHHHHHHHHHHHSC----C---SSS----CHHHHHHHHHHHHHHHHHHHHHSC------CSSH
T ss_pred             HHHHHHHH-cCCCHHH-HHHHHHHHHHHHhc----c---CHH----HHHHHHHHHHHHHHHHHHHHHhCC------CCCH
Confidence            99999999 9998754 23343333333221    1   132    456777888999999999887642      5699


Q ss_pred             HHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHh
Q 011210          272 IDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIK  351 (491)
Q Consensus       272 ~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~  351 (491)
                      ++.+++..+ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                   
T Consensus       221 l~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------  280 (415)
T 2zwu_A          221 ISIVANGQV-NGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE-------------------  280 (415)
T ss_dssp             HHHHHTCEE-TTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------
T ss_pred             HHHHHHhhh-cCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------
Confidence            999998643 344689999999999999999999999999999999999999999999942                   


Q ss_pred             ccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 011210          352 QMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIP  431 (491)
Q Consensus       352 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~  431 (491)
                         ||+|||+|+||++|+++++ |.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||      +..++|
T Consensus       281 ---~l~a~i~E~lRl~p~~~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~  350 (415)
T 2zwu_A          281 ---RIPAACEELLRRFSLVADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ------KVSHTT  350 (415)
T ss_dssp             ---GHHHHHHHHHHHTCCBCCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCS------SCCCCT
T ss_pred             ---HHHHHHHHHHhhcCCcCCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCC------CCCCCC
Confidence               7999999999999999988 999999999999999999999999999999999999999999995      356999


Q ss_pred             ccCCCCCCccHHHHHHHHHHHHHHHHhcCe-EeccCCCCCc-cccccCCCCCCCeEEEeccC
Q 011210          432 FGGGSRICPGADLAKLEISIFIHYFLLNYK-LELQNPECPA-EYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       432 Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  491 (491)
                      ||.|+|.|+|++||++|++++++.|+++|+ +++.+ +.++ ......++..+++|++++|.
T Consensus       351 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~lpv~~~~r~  411 (415)
T 2zwu_A          351 FGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAP-GAQIQHKSGIVSGVQALPLVWDPAT  411 (415)
T ss_dssp             TCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECT-TCCCCEECSSBCEESCCEEECCGGG
T ss_pred             CCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECC-CcccccCCccccCcceeEEEEecCC
Confidence            999999999999999999999999999998 99876 3344 44567888999999999873


No 36 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=7.3e-62  Score=469.36  Aligned_cols=373  Identities=18%  Similarity=0.204  Sum_probs=304.9

Q ss_pred             CchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccccccccc-ccccceeeccchhHHHHHHhh
Q 011210           69 EPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTSTNKL-TFRGSFITASKEGQKRIRKLA  147 (491)
Q Consensus        69 ~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~~~~-~g~~~l~~~~g~~~~~~Rr~~  147 (491)
                      +++.++.++++ |||  |   ++++.+.+++++++.+++++.+++.|.+.....+... .+..+++..+|+.|+++||++
T Consensus        29 ~p~~~~~~l~~-~gp--v---~~~~~~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~  102 (411)
T 2jjn_A           29 ALLDWLGTMRE-KQP--V---WQDRYGVWHVFRHADVQTVLRDTATFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVV  102 (411)
T ss_dssp             HHHHHHHHHHH-HCS--E---EECTTSCEEECSHHHHHHHHHCTTTEESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHH
T ss_pred             ChHHHHHHHHH-hCC--c---ccCCCCeEEECCHHHHHHHHcCcccccCcccccCCcccccccccccCCchHHHHHHHHh
Confidence            67888888876 999  8   4566789999999999999988655554432222221 223567778999999999999


Q ss_pred             hccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCC
Q 011210          148 TSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISP  226 (491)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  226 (491)
                      .+ .|++++++.+.+.+.+.++++++.  .++ ++|+...+ ..+++++++.+ ||.+.++. +.+.+....+....   
T Consensus       103 ~~-~fs~~~l~~~~~~i~~~~~~ll~~--~~~-~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-~~~~~~~~~~~~~~---  173 (411)
T 2jjn_A          103 SS-AFTPRTISDLEPRIRDVTRSLLAD--AGE-SFDLVDVLAFPLPVTIVAEL-LGLPPMDH-EQFGDWSGALVDIQ---  173 (411)
T ss_dssp             HH-HSCHHHHHTTHHHHHHHHHHHHHT--SCS-EEEHHHHTTTHHHHHHHHHH-HTCCSCCC-STTCCHHHHHHHSC---
T ss_pred             hh-hcCHHHHHHHHHHHHHHHHHHHhc--CCC-ceeHHHHHHHHHHHHHHHHH-cCCCHHHH-HHHHHHHHHHHhcc---
Confidence            99 899999999999999999999998  344 89999555 68999999998 99986532 22222333332221   


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccH
Q 011210          227 FPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESS  306 (491)
Q Consensus       227 ~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt  306 (491)
                      .+.+.+.....+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..+++||+|||
T Consensus       174 ~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~-~~~~l~~~el~~~~~~~~~AG~eTt  246 (411)
T 2jjn_A          174 MDDPTDPALAERIADVLNPLTAYLKARCAERRADP------GDDLISRLVLAEV-DGRALDDEEAANFSTALLLAGHITT  246 (411)
T ss_dssp             CSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhccc-CCCCCCHHHHHHHHHHHHHhhhHHH
Confidence            22223212344566778888999999998887632      5799999998753 3456999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCe
Q 011210          307 AHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGY  386 (491)
Q Consensus       307 ~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~  386 (491)
                      +++++|++++|++||++|+|+++|++                      ||+|||+|+||++|++++++|.+.+|++++|+
T Consensus       247 ~~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~  304 (411)
T 2jjn_A          247 TVLLGNIVRTLDEHPAHWDAAAEDPG----------------------RIPAIVEEVLRYRPPFPQMQRTTTKATEVAGV  304 (411)
T ss_dssp             HHHHHHHHHHHHHSTHHHHHHHHCGG----------------------GHHHHHHHHHHHSCSSCEEEEEESSCEEETTE
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHhCHH----------------------hHHHHHHHHhhhCCCcCCcceEECCCeEECCE
Confidence            99999999999999999999999953                      79999999999999999889999999999999


Q ss_pred             EeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCe-Eecc
Q 011210          387 FIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYK-LELQ  465 (491)
Q Consensus       387 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~  465 (491)
                      .||||+.|+++.+++||||++|+||++|+||||.+    ...++|||.|+|.|+|++||++|++++++.|+++|+ +++.
T Consensus       305 ~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~  380 (411)
T 2jjn_A          305 PIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG----GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVD  380 (411)
T ss_dssp             EECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS----SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEEC
T ss_pred             EECCCCEEEechhhhCCChhhcCCccccCCCCCCC----CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceEC
Confidence            99999999999999999999999999999999843    136999999999999999999999999999999995 9987


Q ss_pred             CCCCCc--cccccCCCCCCCeEEEecc
Q 011210          466 NPECPA--EYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       466 ~~~~~~--~~~~~~~~~~~~~~~~~~~  490 (491)
                      + +.++  ......++..+++|+++++
T Consensus       381 ~-~~~~~~~~~~~~~~~~~lpv~~~~~  406 (411)
T 2jjn_A          381 R-DDERLRHFEQIVLGTRHLPVLAGSS  406 (411)
T ss_dssp             C-SSCCCCBCCSSSSSBSCCEEECSCC
T ss_pred             C-CCceeccccccccCcceeEEEecCC
Confidence            4 3334  3345778889999999865


No 37 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=8.2e-62  Score=467.48  Aligned_cols=371  Identities=21%  Similarity=0.291  Sum_probs=309.8

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCccccccc-----cc--cccccccccceeeccchh
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGY-----PT--STNKLTFRGSFITASKEG  139 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~-----~~--~~~~~~g~~~l~~~~g~~  139 (491)
                      .+++.++.+| ++||+  |+++++ ++.+++++++++.+++++.++. +.+..     +.  .+....+..+++..+|+.
T Consensus        19 ~~p~~~~~~l-~~yGp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   94 (403)
T 3aba_A           19 FLPPDGIADI-RAAAP--VTRATFTSGHEAWLVTGYEEVRALLRDSS-FSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE   94 (403)
T ss_dssp             TSCCTTHHHH-HHHCS--EEEEECTTSCEEEEECCHHHHHHHHHCTT-EESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred             cChhHHHHHH-HhcCC--eeeeccCCCceEEEEcCHHHHHHHHcCCC-cccccccccccccccccccccccccccCCchh
Confidence            4789999999 89999  999997 7899999999999999998864 43331     11  122222335677789999


Q ss_pred             HHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh-cCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHH
Q 011210          140 QKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA-SLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYI  217 (491)
Q Consensus       140 ~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~  217 (491)
                      |+++||++++ .|++++++.+.+.+.+.++++++.+. .++ ++|+...+ ..++.++++. +||.+.++ ...+...  
T Consensus        95 h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~--  168 (403)
T 3aba_A           95 HTSDRKLLAK-EFTVRRMQALRPNIQRIVDEHLDAIEARGG-PVDLVKTFANAVPSMVISD-LFGVPVER-RAEFQDI--  168 (403)
T ss_dssp             HHHHHHHHHH-HSCHHHHHTTHHHHHHHHHHHHHHHHHHCS-CEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHHHHH--
T ss_pred             HHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHH--
Confidence            9999999999 89999999999999999999999987 544 89999776 4799999997 69998653 2223222  


Q ss_pred             HHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHH
Q 011210          218 DYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLIS  297 (491)
Q Consensus       218 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~  297 (491)
                        ...+....   .+ +  .+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..
T Consensus       169 --~~~~~~~~---~~-p--~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~l~~~ei~~~~~~  233 (403)
T 3aba_A          169 --AEAMMRVD---QD-A--AATEAAGMRLGGLLYQLVQERRANP------GDDLISALITTED-PDGVVDDMFLMNAAGT  233 (403)
T ss_dssp             --HHHHSBSS---SC-H--HHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHTSCC-TTCCCSHHHHHHHHHH
T ss_pred             --HHHHHhcc---Cc-H--HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhhcc-CCCCCCHHHHHHHHHH
Confidence              22222211   11 1  5566778889999999999887642      4689999998754 4457999999999999


Q ss_pred             HHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-Cccee
Q 011210          298 FLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFRE  376 (491)
Q Consensus       298 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~  376 (491)
                      +++||+|||+++++|++++|++||++|+|+++|+                      .||+|||+|+||++|+++ +++|.
T Consensus       234 l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~~~R~  291 (403)
T 3aba_A          234 LLIAAHDTTACMIGLGTALLLDSPDQLALLREDP----------------------SLVGNAVEELLRYLTIGQFGGERV  291 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG----------------------GGHHHHHHHHHHHHCSCTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH----------------------HHHHHHHHHHHhcCCCcccccceE
Confidence            9999999999999999999999999999999984                      269999999999999999 78999


Q ss_pred             ecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHH
Q 011210          377 AEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYF  456 (491)
Q Consensus       377 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~l  456 (491)
                      +.+|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.|
T Consensus       292 ~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~l  365 (403)
T 3aba_A          292 ATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRR------PAPHLAFGFGAHQCIGQQLARIELQIVFETL  365 (403)
T ss_dssp             ESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------CCCCSTTCCGGGSCTTHHHHHHHHHHHHHHH
T ss_pred             eCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCC------CCCccCCCCCCccCcCHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998      3568999999999999999999999999999


Q ss_pred             HhcC-eEeccCCCCCccc--cccCCCCCCCeEEEeccC
Q 011210          457 LLNY-KLELQNPECPAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       457 l~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                      +++| ++++.+++.+..+  ....++..+++|++++|+
T Consensus       366 l~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          366 FRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             HHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred             HHhCCCceecCCccccccccCcccCCcceeEEEecCCC
Confidence            9999 6998765333333  346889999999999986


No 38 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=2e-61  Score=466.12  Aligned_cols=387  Identities=19%  Similarity=0.254  Sum_probs=313.0

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHc-CCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccccccc-
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERY-GRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYP-  120 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~y-G~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~-  120 (491)
                      +.||+|+++|.+..-..+.     .+++.++.+| ++| |+  |+++++ ++.++++|+|++.++++|.+++ +.+... 
T Consensus         5 ~~~~~~~~~P~~~~~~~~~-----~~p~~~~~~l-~~~yGp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~   75 (412)
T 2zbx_A            5 ATTPQTTDAPAFPSNRSCP-----YQLPDGYAQL-RDTPGP--LHRVTLYDGRQAWVVTKHEAARKLLGDPR-LSSNRTD   75 (412)
T ss_dssp             ---CCCCSSCBSSCCCSST-----TSCCHHHHHH-HHSSSS--EEEEECTTSCEEEEECSHHHHHHHHTCTT-EECCTTS
T ss_pred             CCCCCCCCCCCCCCCchhc-----cChHHHHHHH-HhcCCC--eEeeccCCCCcEEEEecHHHHHHHHcCcc-cccCccc
Confidence            5678888888663222233     5899999999 888 99  999998 7889999999999999998764 222111 


Q ss_pred             ccccc-------cc-cccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHH-H
Q 011210          121 TSTNK-------LT-FRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRK-A  191 (491)
Q Consensus       121 ~~~~~-------~~-g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~-~  191 (491)
                      .....       +. +..+++..+|+.|+++||++.+ .|++++++.+.+.+.+.++++++.+...++++|+...+.. +
T Consensus        76 ~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~  154 (412)
T 2zbx_A           76 DNFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTIS-EFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPV  154 (412)
T ss_dssp             TTSCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGG-GGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHH
T ss_pred             ccccccccccccccccccccccCCcHHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence            01110       10 2245677899999999999999 8999999999999999999999998654448999998864 8


Q ss_pred             HHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccH
Q 011210          192 TFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGL  271 (491)
Q Consensus       192 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  271 (491)
                      +.++++. +||.+.++ ...+.+.+..+..     ..    . . .+..++.+.+.+++.+.|++++++.      .+|+
T Consensus       155 ~~~vi~~-~~G~~~~~-~~~~~~~~~~~~~-----~~----~-~-~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~  215 (412)
T 2zbx_A          155 PSMVICR-LLGVPYAD-HEFFQDASKRLVQ-----ST----D-A-QSALTARNDLAGYLDGLITQFQTEP------GAGL  215 (412)
T ss_dssp             HHHHHHH-HHTCCGGG-HHHHHHHHHHHHH-----CS----S-H-HHHHHHHHHHHHHHHHHHHHHHHSC------CSSH
T ss_pred             HHHHHHH-HcCCCHHH-HHHHHHHHHHHhc-----cC----c-H-HHHHHHHHHHHHHHHHHHHHHHhCC------CCCH
Confidence            8999996 79998643 2233333333222     11    1 1 5566778888999999998887642      4689


Q ss_pred             HHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHh
Q 011210          272 IDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIK  351 (491)
Q Consensus       272 ~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~  351 (491)
                      ++.+++..+ ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                   
T Consensus       216 l~~ll~~~~-~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------------------  275 (412)
T 2zbx_A          216 VGALVADQL-ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS-------------------  275 (412)
T ss_dssp             HHHHHHTTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------------
T ss_pred             HHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH-------------------
Confidence            999998754 344699999999999999999999999999999999999999999999742                   


Q ss_pred             ccHHHHHHHHHhcccCCCCC-CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 011210          352 QMEYLAKVIAETLRMTNLSP-SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFI  430 (491)
Q Consensus       352 ~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~  430 (491)
                         ||+|||+|+||++|+++ +++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++
T Consensus       276 ---~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l  346 (412)
T 2zbx_A          276 ---LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRS------ARHHL  346 (412)
T ss_dssp             ---GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSC------CTTCC
T ss_pred             ---hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCC------CCCcc
Confidence               68999999999999999 689999999999999999999999999999999999999999999996      45799


Q ss_pred             cccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCcccc--ccCCCCCCCeEEEe
Q 011210          431 PFGGGSRICPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEYL--PVPRPSDQCLAKVV  488 (491)
Q Consensus       431 ~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  488 (491)
                      |||.|+|.|+|++||++|++++++.|+++| ++++.+++.++.+.  ...+....+||+..
T Consensus       347 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          347 AFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             TTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             CCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeecc
Confidence            999999999999999999999999999999 79987653344443  46778888888754


No 39 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=3.3e-61  Score=463.90  Aligned_cols=370  Identities=20%  Similarity=0.293  Sum_probs=309.9

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccccc--------ccccccccceeeccchh
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTS--------TNKLTFRGSFITASKEG  139 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~--------~~~~~g~~~l~~~~g~~  139 (491)
                      .+++.++.+| ++||+  |+++++++.++++|++|+.+++++.+++ |.++....        .... +..+++..+|+.
T Consensus        20 ~~p~~~~~~l-~~yGp--v~~~~~~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g~~   94 (411)
T 3a4g_A           20 QNPHPAYAAL-RAEDP--VRKLALPDGPVWLLTRYADVREAFVDPR-LSKDWRHTLPEDQRADMPAT-PTPMMILMDPPD   94 (411)
T ss_dssp             TCCHHHHHHH-HHHCS--EEEEEETTEEEEEECSHHHHHHHHTCTT-EESCGGGGSCGGGCTTCCSC-SSCCGGGCCTTH
T ss_pred             cCchHHHHHH-HhcCC--eeeccCCCCCEEEEecHHHHHHHHhCCC-cccccccccccccccccCcc-cccccccCCchH
Confidence            4899999999 99999  9999999899999999999999999875 54432111        1111 235677789999


Q ss_pred             HHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHH
Q 011210          140 QKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYID  218 (491)
Q Consensus       140 ~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  218 (491)
                      |+++||++.+ .|++++++.+.+.+.+.++++++.+.+++ ++|+...+ ..++.++++.+ ||.+.++ ...+.+... 
T Consensus        95 h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~-  169 (411)
T 3a4g_A           95 HTRLRKLVGR-SFTVRRMNELEPRITEIADGLLAGLPTDG-PVDLMREYAFQIPVQVICEL-LGVPAED-RDDFSAWSS-  169 (411)
T ss_dssp             HHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHSCSSS-CEEHHHHTTTTHHHHHHHHH-HTCCGGG-HHHHHHHHH-
T ss_pred             HHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHhHHHHHHHH-hCCCHHH-HHHHHHHHH-
Confidence            9999999999 89999999999999999999999997655 89997655 68999999975 9988653 223333222 


Q ss_pred             HHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHH
Q 011210          219 YAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISF  298 (491)
Q Consensus       219 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~  298 (491)
                         .+....|   |    .+..++.+.+.+++.+.+++++++.      .+|+++.+++..++++..++++++.+++..+
T Consensus       170 ---~~~~~~p---~----~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l  233 (411)
T 3a4g_A          170 ---VLVDDSP---A----DDKNAAMGKLHGYLSDLLERKRTEP------DDALLSSLLAVSDEDGDRLSQEELVAMAMLL  233 (411)
T ss_dssp             ---HHTTSSC---T----TTHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCCTTCCCCCHHHHHHHHHHH
T ss_pred             ---HHhccCC---H----HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhccCCCCCCHHHHHHHHHHH
Confidence               2222111   1    2456777888999999999887642      4699999998754345579999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-Ccceee
Q 011210          299 LSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREA  377 (491)
Q Consensus       299 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~  377 (491)
                      ++||+|||+++++|++++|++||++|+|+++|+                      .|++|||+|+||++|+++ +++|.+
T Consensus       234 ~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~~~R~~  291 (411)
T 3a4g_A          234 LIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP----------------------SLISSAVEEFLRFDSPVSQAPIRFT  291 (411)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG----------------------GGHHHHHHHHHHHTCSBCBCCCEEE
T ss_pred             HHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH----------------------HHHHHHHHHHHHhcccccCCceeEe
Confidence            999999999999999999999999999999984                      279999999999999999 789999


Q ss_pred             cccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHH
Q 011210          378 EADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFL  457 (491)
Q Consensus       378 ~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll  457 (491)
                      .+|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|++++++.|+
T Consensus       292 ~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll  365 (411)
T 3a4g_A          292 AEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLF  365 (411)
T ss_dssp             SSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             CCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999973      4699999999999999999999999999999


Q ss_pred             hcC-eEeccCCCCCccc--cccCCCCCCCeEEEeccC
Q 011210          458 LNY-KLELQNPECPAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       458 ~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                      ++| ++++.+++.+..+  ....++..+++|++++|.
T Consensus       366 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  402 (411)
T 3a4g_A          366 ADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRS  402 (411)
T ss_dssp             HHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCC
T ss_pred             HhCCCcEECCCccccccccCccccCcceeEEEecCcc
Confidence            999 6998754333333  346788999999999874


No 40 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=1.5e-61  Score=465.90  Aligned_cols=371  Identities=17%  Similarity=0.212  Sum_probs=311.1

Q ss_pred             cCCchHHHHHHHHHcCCcceEEeeeCC--CcEEEEeChHhHhHHhcCCccccccccc-----ccccccc--ccceeeccc
Q 011210           67 SSEPQSFIYNLFERYGRKGIYRNHIFG--SPCVIVVAPEACKQVFLDDENFKMGYPT-----STNKLTF--RGSFITASK  137 (491)
Q Consensus        67 ~~~~~~~~~~~~~~yG~~~v~~~~~~~--~~~vvv~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~g--~~~l~~~~g  137 (491)
                      +++++.++.+++ +|||  |+++.+++  .+.+++++|+.+++++.++ .|.+....     .+..+.+  ..+++..+|
T Consensus        26 g~~p~~~~~~l~-~~Gp--v~~~~~~~g~~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  101 (411)
T 2dkk_A           26 GPEFDPVLAELM-REGP--LTRVRLPHGEGWAWLATRYDDVKAITNDP-RFGRAEVTQRQITRLAPHFKPRPGSLAFADQ  101 (411)
T ss_dssp             SSCCCHHHHHHH-TTCS--EEEEECSBSBSCEEEECSHHHHHHHTTCT-TEESGGGGGSCBCBSSSCCCCCTTCSTTCCT
T ss_pred             cccccHHHHHHH-hcCC--eEeeecCCCceeEEEEcCHHHHHHHHcCC-CcccCCCCCCCccccccchhccccccccCCc
Confidence            356779998887 8999  99999764  7899999999999999875 34333211     1222322  356777899


Q ss_pred             hhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhHHHHH
Q 011210          138 EGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSVEKHY  216 (491)
Q Consensus       138 ~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~  216 (491)
                      +.|+++|+++++ .|++++++.+.+.+.+.++++++.+...++++|+..++. .+++++++. +||.+.++     .+.+
T Consensus       102 ~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-----~~~~  174 (411)
T 2dkk_A          102 PDHNRLRRAVAG-AFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSE-VMGVPAAD-----RERV  174 (411)
T ss_dssp             THHHHHHHHHGG-GSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH-----HHHH
T ss_pred             hHHHHHHHHhhH-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-----HHHH
Confidence            999999999999 899999999999999999999999965555899998876 699999998 59998754     1234


Q ss_pred             HHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHH
Q 011210          217 IDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLI  296 (491)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~  296 (491)
                      ......+....+      ...+..++...+.+++.+.+++++++.      .+|+++.+++.  +++..++++++.+++.
T Consensus       175 ~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~i~~r~~~~------~~dll~~ll~~--~~~~~ls~~el~~~~~  240 (411)
T 2dkk_A          175 HSWTRQIISTSG------GAEAAERAKRGLYGWITETVRARAGSE------GGDVYSMLGAA--VGRGEVGETEAVGLAG  240 (411)
T ss_dssp             HHHHGGGCSSCS------CSHHHHHHHHHHHHHHHHHHHTTTTCC------SSCHHHHHHHH--HHTTSSCTTSHHHHHH
T ss_pred             HHHHHHHHhccc------hHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHh--cCCCCCCHHHHHHHHH
Confidence            444444443221      235667788888999999888776542      46999999987  3455799999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-C-cc
Q 011210          297 SFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-S-SF  374 (491)
Q Consensus       297 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~-~~  374 (491)
                      .+++|| |||+++++|++++|++||++|+++++|++                      |+++||+|+||++|+++ . ++
T Consensus       241 ~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~~~  297 (411)
T 2dkk_A          241 PLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG----------------------ARGTALDELLRWISHRTSVGLA  297 (411)
T ss_dssp             HHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT----------------------CCHHHHHHHHHHSCCBSSCCCC
T ss_pred             HHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------------HHHHHHHHHHhhCCccccCccc
Confidence            999999 99999999999999999999999999953                      68999999999999999 7 89


Q ss_pred             eeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHH
Q 011210          375 REAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIH  454 (491)
Q Consensus       375 r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~  454 (491)
                      |.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|++++++
T Consensus       298 R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~  371 (411)
T 2dkk_A          298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP------NPHLAYGNGHHFCTGAVLARMQTELLVD  371 (411)
T ss_dssp             EEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHH
T ss_pred             eEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC------CCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999984      5699999999999999999999999999


Q ss_pred             HHHhcC-eEeccCCCCC--ccccccCCCCCCCeEEEeccC
Q 011210          455 YFLLNY-KLELQNPECP--AEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       455 ~ll~~f-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      .|+++| ++++.+++.+  +......++..+++|++++|+
T Consensus       372 ~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          372 TLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             HHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCCC
T ss_pred             HHHHHCCCcEECCCccccccccCcccCCcceeEEEeccCC
Confidence            999999 8999865333  333457889999999999986


No 41 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=3e-61  Score=463.20  Aligned_cols=371  Identities=19%  Similarity=0.249  Sum_probs=307.1

Q ss_pred             CchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc--c-----cccccc--ccceeeccchh
Q 011210           69 EPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT--S-----TNKLTF--RGSFITASKEG  139 (491)
Q Consensus        69 ~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~--~-----~~~~~g--~~~l~~~~g~~  139 (491)
                      +++.++..+ ++|||  |++ +  |.++++|++|+.++++|.++ .+.+....  .     ...+.+  ..+++..+|+.
T Consensus        14 ~p~~~~~~l-~~yGp--v~~-~--g~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~   86 (397)
T 3buj_A           14 DPYPSYHWL-LRHDP--VHR-G--AHRVWYVSRFADVRAVLGDE-RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPD   86 (397)
T ss_dssp             CCHHHHHHH-HHHCS--EEE-C--GGGCEEECSHHHHHHHHTCT-TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTH
T ss_pred             CchHHHHHH-HhcCC--eee-C--CCCeEEEcCHHHHHHHHcCC-CcccCcccccccccccccccccccccccccCCchh
Confidence            788999876 69999  999 6  58899999999999999874 34432111  0     001111  35677789999


Q ss_pred             HHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHH
Q 011210          140 QKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYID  218 (491)
Q Consensus       140 ~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  218 (491)
                      |+++||++.+ .|++++++.+.+.+.+.++++++.+.+++ ++|+...+ ..++.++++.+ ||.+.++. ..+......
T Consensus        87 h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~dl~~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~~~~~  162 (397)
T 3buj_A           87 HGRLRGVVGP-AFSPSALRRLEPVIAGTVDDLLRPALARG-AMDVVDELAYPLALRAVLGL-LGLPAADW-GAVGRWSRD  162 (397)
T ss_dssp             HHHHHHHHGG-GSSTTTTGGGHHHHHHHHHHHHHHHHTTT-EEEHHHHTHHHHHHHHHHHH-HTCCGGGH-HHHHHHHHH
T ss_pred             HHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHhhcC-CeehHHHHHHHhHHHHHHHH-hCCCHHHH-HHHHHHHHH
Confidence            9999999999 99999999999999999999999997666 89987654 78999999998 99986542 233333333


Q ss_pred             HHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHH
Q 011210          219 YAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISF  298 (491)
Q Consensus       219 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~  298 (491)
                      +...    ++..++...+.+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++. ++++++.+++..+
T Consensus       163 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~-ls~~ei~~~~~~~  230 (397)
T 3buj_A          163 VGRT----LDRGASAEDMRRGHAAIAEFADYVERALARRRREG------GEDLLALMLDAHD-RGL-MSRNEIVSTVVTF  230 (397)
T ss_dssp             HHGG----GCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCSHHHHHHHHHH-TTS-SCHHHHHHHHHHH
T ss_pred             HHhh----cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCC------CCCHHHHHHHhhh-cCC-CCHHHHHHHHHHH
Confidence            3222    22223333345667778889999999998887642      5699999998753 344 9999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeec
Q 011210          299 LSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAE  378 (491)
Q Consensus       299 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~  378 (491)
                      ++||+|||+++++|++++|++||++|+|+++|+                      .||+|||+|+||++|++++++|.+.
T Consensus       231 ~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~~R~~~  288 (397)
T 3buj_A          231 IFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP----------------------DLLAQAVEECLRYDPSVQSNTRQLD  288 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG----------------------GGHHHHHHHHHHHSCSCCEEEEEES
T ss_pred             HHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH----------------------HHHHHHHHHHHhhcCcccCcceEEC
Confidence            999999999999999999999999999999984                      2799999999999999998899999


Q ss_pred             ccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHh
Q 011210          379 ADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLL  458 (491)
Q Consensus       379 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~  458 (491)
                      +|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|++++++.| +
T Consensus       289 ~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~  361 (397)
T 3buj_A          289 VDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-A  361 (397)
T ss_dssp             SCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-H
T ss_pred             CCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-h
Confidence            999999999999999999999999999999999999999994      458999999999999999999999999999 9


Q ss_pred             cC-eEeccCCCCCccc--cccCCCCCCCeEEEeccC
Q 011210          459 NY-KLELQNPECPAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       459 ~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                      +| ++++.+++.+..+  ..+.++..+++|++++|+
T Consensus       362 ~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          362 RLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             TSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTTC
T ss_pred             cCCCceeCCCCcccccccccccCCCcceeEEecCCC
Confidence            99 8999865333333  456889999999999985


No 42 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=4e-62  Score=484.42  Aligned_cols=402  Identities=16%  Similarity=0.207  Sum_probs=304.3

Q ss_pred             CcCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcE-------EEEeChHhHhHHhcCCc
Q 011210           41 MKHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPC-------VIVVAPEACKQVFLDDE  113 (491)
Q Consensus        41 ~~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~-------vvv~~~~~~~~i~~~~~  113 (491)
                      .+.+.||||.|||++|+++++..+++..+++.++.++++|||+. ||++++++.++       +++++++..+.++....
T Consensus        25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~-Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~  103 (495)
T 3dsk_A           25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNST-VYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK  103 (495)
T ss_dssp             CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCS-EEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCc-eEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence            35678999999999999999987766789999999999999986 99999988888       67778777777665532


Q ss_pred             -----ccccccccccccccc---ccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc----CCCC
Q 011210          114 -----NFKMGYPTSTNKLTF---RGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS----LDTP  181 (491)
Q Consensus       114 -----~~~~~~~~~~~~~~g---~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~  181 (491)
                           .+...++... .++|   ...++..+|+.|+++|+++.+ .|++.. ..+.+.+.+.++++++.|..    ++ +
T Consensus       104 v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~-~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~-~  179 (495)
T 3dsk_A          104 VEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFF-LLKSSR-NRIFPEFQATYSELFDSLEKELSLKG-K  179 (495)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHH-HHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHS-S
T ss_pred             ccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCC-C
Confidence                 2333444444 5555   234555689999999999999 888754 88999999999999999853    34 8


Q ss_pred             eehHHHHHHHHHHHHHHHhcCCCCchh--hhhHHHHHHHHHhc-ccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHH
Q 011210          182 IEFLTEMRKATFKIIANIFLGSSSDSV--IGSVEKHYIDYAHG-LISPFPINLPGFSFHKAMKARDMLGEILQPVLNERR  258 (491)
Q Consensus       182 vdl~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~  258 (491)
                      +|+.+++..++++++++.+||.+.+..  ...+...+...... ....+...+|.               ++.+++.+++
T Consensus       180 vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~---------------~~~~~~~~~~  244 (495)
T 3dsk_A          180 ADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPR---------------VIEEPLIHTF  244 (495)
T ss_dssp             EESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCH---------------HHHHHHHSSS
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHH---------------HHHHHHHHhh
Confidence            999999999999999999999986543  11111112111110 00001113331               1111111111


Q ss_pred             Hch--------hhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHH-hcccccHHHHHHHHHHHHhh-CchHHHHHH
Q 011210          259 AMK--------SDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFL-SAGHESSAHIATWALIHLHK-HPQTLRKAK  328 (491)
Q Consensus       259 ~~~--------~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~lr  328 (491)
                      +..        ....+.-.+.++.+++..++  .+++++++..+++.++ +||++||+.+++|++++|+. ||++|++||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr  322 (495)
T 3dsk_A          245 SLPPALVKSDYQRLYEFFLESAGEILVEADK--LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLA  322 (495)
T ss_dssp             CCCGGGGHHHHHHHHHHHHHHCHHHHHHHHH--TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            000        00000012333455544432  2689999998766665 99999999999999999996 999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee----CCeEeCCCCEEEEcccccccC
Q 011210          329 EEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI----QGYFIPKGWKVLVYNRGVHYN  404 (491)
Q Consensus       329 ~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~~d  404 (491)
                      +|++++++..  +.. ++.+++++||||+|||+|+||++|+++...|.+.+|+++    +||.||||+.|+++.+++|||
T Consensus       323 ~Ei~~~~~~~--~~~-~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~d  399 (495)
T 3dsk_A          323 EEIRSVIKSN--GGE-LTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRD  399 (495)
T ss_dssp             HHHHHHHHHT--TTC-CCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTC
T ss_pred             HHHHHHhccC--CCC-CCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCC
Confidence            9999998853  233 899999999999999999999999999888889999999    599999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCC-C---------CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCC
Q 011210          405 PENYPDPKQFDPSRWDNHT-T---------RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYKLELQNP  467 (491)
Q Consensus       405 ~~~~~~p~~F~PeRfl~~~-~---------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  467 (491)
                      |++|+||++|+||||++.+ .         ....+++||+|+|.|||++||++|++++++.|+++|++...++
T Consensus       400 p~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  472 (495)
T 3dsk_A          400 PKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV  472 (495)
T ss_dssp             TTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             cccCCCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence            9999999999999999742 1         2234455556669999999999999999999999999876543


No 43 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.8e-61  Score=469.32  Aligned_cols=393  Identities=17%  Similarity=0.218  Sum_probs=313.5

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEee--------eCCCcEEEEeChHhHhHHhcCCc
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNH--------IFGSPCVIVVAPEACKQVFLDDE  113 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~--------~~~~~~vvv~~~~~~~~i~~~~~  113 (491)
                      ..+.||+|.+++++...  +..   .++++.++.++ ++|||  |+++.        +|+.++++|++|+.+++++++++
T Consensus        16 ~~~~p~~~~~~~~~~~~--~~~---~~~p~~~~~~l-r~~gP--v~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~   87 (433)
T 3ivy_A           16 TVPSPNLPPGFDFTDPA--IYA---ERLPVAEFAEL-RSAAP--IWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSD   87 (433)
T ss_dssp             ----CCCCTTCCTTCHH--HHT---TCCCHHHHHHH-HHHCS--EEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTT
T ss_pred             ccCCCCCCCCCCCCCHH--Hhh---cCCccHHHHHH-HhcCC--EEecccccccccccCCCCEEEEecHHHHHHHHcChh
Confidence            45677888888877643  322   24799999998 88999  99998        45579999999999999998876


Q ss_pred             cccccccccccc----------cccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCee
Q 011210          114 NFKMGYPTSTNK----------LTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIE  183 (491)
Q Consensus       114 ~~~~~~~~~~~~----------~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd  183 (491)
                      .|.+........          ..+..+++..+|+.|+++||++++ .|+++.++.+.+.+.+.++++++.+..++ ++|
T Consensus        88 ~fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~d  165 (433)
T 3ivy_A           88 VFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISR-GFTPRAVGRLHDELQERAQKIAAEAAAAG-SGD  165 (433)
T ss_dssp             TEESTTTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGG-GSCHHHHHTTHHHHHHHHHHHHHHHHHHC-EEE
T ss_pred             hccCCcccccccccccccccccccccCCccccChHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHhhCC-Cee
Confidence            565543322111          122356778899999999999999 99999999999999999999999997655 899


Q ss_pred             hHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchh
Q 011210          184 FLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKS  262 (491)
Q Consensus       184 l~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  262 (491)
                      +..++ ..+++++++++ ||.+.++     .+.+......+..   ...|.....+..++...+.+++.+.+++++++. 
T Consensus       166 ~~~~~~~~~~~~vi~~l-~G~~~~~-----~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-  235 (433)
T 3ivy_A          166 FVEQVSCELPLQAIAGL-LGVPQED-----RGKLFHWSNEMTG---NEDPEYAHIDPKASSAELIGYAMKMAEEKAKNP-  235 (433)
T ss_dssp             HHHHTTSHHHHHHHHHH-HTCCHHH-----HHHHHHHHTTCSC---CCCGGGTTCCHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHHH-cCCCHHH-----HHHHHHHHHHHhc---cCCchhhhHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            99998 99999999996 8976432     1233333333322   112222222566778888999999998877542 


Q ss_pred             hhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCC
Q 011210          263 DEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQ  342 (491)
Q Consensus       263 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~  342 (491)
                           .+|+++.+++..+ ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++          
T Consensus       236 -----~~dll~~ll~~~~-~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------  299 (433)
T 3ivy_A          236 -----ADDIVTQLIQADI-DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP----------  299 (433)
T ss_dssp             --------CHHHHHSCC---CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC----------
T ss_pred             -----CCcHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc----------
Confidence                 5689999998754 445799999999999999999999999999999999999999999999942          


Q ss_pred             CCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCC
Q 011210          343 KGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNH  422 (491)
Q Consensus       343 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~  422 (491)
                                    ++||+|+||++|+++.++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+||||   
T Consensus       300 --------------~a~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~---  362 (433)
T 3ivy_A          300 --------------ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRN---  362 (433)
T ss_dssp             --------------TTHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCC---
T ss_pred             --------------cchhHHHhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCC---
Confidence                          789999999999999889999999999999999999999999999999999999999999998   


Q ss_pred             CCCCCCccccc-CCCCCCccHHHHHHHHHHHHHHHHhcCe-EeccCCCCCccccccCCCCCCCeEEEeccC
Q 011210          423 TTRPGSFIPFG-GGSRICPGADLAKLEISIFIHYFLLNYK-LELQNPECPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       423 ~~~~~~~~~Fg-~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                         ...++||| .|+|.|+|++||++|++++++.|+++|+ +++.+++ ........+....+||++++|+
T Consensus       363 ---~~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~g~~~lpv~~~~R~  429 (433)
T 3ivy_A          363 ---PNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP-ERLRSGWLNGIKHWQVDYTGRC  429 (433)
T ss_dssp             ---SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC-EECCCSSBCCEEECEEESCC--
T ss_pred             ---CCCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC-ceeccCcccCcceeEEEEeccc
Confidence               34699999 9999999999999999999999999998 9987543 2333446677778999998874


No 44 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=2.9e-61  Score=464.10  Aligned_cols=382  Identities=18%  Similarity=0.225  Sum_probs=311.8

Q ss_pred             CCCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeee-CCCc-EEEEeChHhHhHHhcCCccccccccc
Q 011210           44 SLPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHI-FGSP-CVIVVAPEACKQVFLDDENFKMGYPT  121 (491)
Q Consensus        44 ~~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~-~~~~-~vvv~~~~~~~~i~~~~~~~~~~~~~  121 (491)
                      +.+|+|+++|+.++.        ..+++.++.+++ +||+  |+++++ +|.+ +++|+||+.+++++.++ .|.+....
T Consensus         8 ~~~~~~~~~p~~~~~--------~~~p~~~~~~l~-~~Gp--v~~~~~~~g~~p~~vv~~~~~v~~vl~~~-~f~~~~~~   75 (406)
T 1s1f_A            8 QAVPPVRDWPAVDLP--------GSDFDPVLTELM-REGP--VTRISLPNGEGWAWLVTRHDDVRLVTNDP-RFGREAVM   75 (406)
T ss_dssp             CCSCCEEECCCCCCC--------TTCCCHHHHHHH-HHCS--EEEEECSBSBSCEEEECSHHHHHHHHTCT-TEESTTTT
T ss_pred             hhccCCCCCCCCccc--------ccCchHHHHHHH-hcCC--eeeeccCCCcccEEEEcCHHHHHHHHcCC-CccCCcCC
Confidence            567888889998872        248999999885 7999  999996 5666 99999999999999874 34433211


Q ss_pred             c-----ccc-ccc-ccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh-cCCCCeehHHHH-HHHH
Q 011210          122 S-----TNK-LTF-RGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA-SLDTPIEFLTEM-RKAT  192 (491)
Q Consensus       122 ~-----~~~-~~g-~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~vdl~~~~-~~~~  192 (491)
                      .     ... ..+ ..+++..+|+.|+++||++++ .|++++++.+.+.+.+.++++++.+. .++ ++|+...+ ..++
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~d~~~~~~~~~~  153 (406)
T 1s1f_A           76 DRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAA-AFTARGVERVRERSRGMLDELVDAMLRAGP-PADLTEAVLSPFP  153 (406)
T ss_dssp             TTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHHHHHHHCS-SEEHHHHTTTHHH
T ss_pred             CCCcccccccccccccccccCCchHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CccHHHHHhhHhH
Confidence            1     112 211 356777899999999999999 89999999999999999999999997 555 89998776 4799


Q ss_pred             HHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHH
Q 011210          193 FKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLI  272 (491)
Q Consensus       193 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (491)
                      .++++. +||.+.++. ..+......+.... .  +   +    .+..++.+.+.+++.+.+++++++      ..+|++
T Consensus       154 ~~vi~~-~~G~~~~~~-~~~~~~~~~~~~~~-~--~---~----~~~~~~~~~~~~~~~~~i~~r~~~------~~~d~l  215 (406)
T 1s1f_A          154 IAVICE-LMGVPATDR-HSMHTWTQLILSSS-H--G---A----EVSERAKNEMNAYFSDLIGLRSDS------AGEDVT  215 (406)
T ss_dssp             HHHHHH-HHTCCGGGH-HHHHHHHHHHHHHH-T--T---C----CCCHHHHTHHHHHHHHHHHTSCCS------CCCSHH
T ss_pred             HHHHHH-HhCCCHHHH-HHHHHHHHHHHhcc-C--C---H----HHHHHHHHHHHHHHHHHHHHHHhC------CCCCHH
Confidence            999998 599986542 23333332222211 1  1   1    134566777888888888776543      156999


Q ss_pred             HHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 011210          273 DLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQ  352 (491)
Q Consensus       273 ~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~  352 (491)
                      +.+++..++  ..++++++.+++..+++|| |||+++++|++++|++||++|+|+++|++                    
T Consensus       216 ~~ll~~~~~--~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~--------------------  272 (406)
T 1s1f_A          216 SLLGAAVGR--DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE--------------------  272 (406)
T ss_dssp             HHHHHHHHT--TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG--------------------
T ss_pred             HHHHHhhcc--cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------------
Confidence            999987543  4699999999999999999 99999999999999999999999999853                    


Q ss_pred             cHHHHHHHHHhcccCCCCC--CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 011210          353 MEYLAKVIAETLRMTNLSP--SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFI  430 (491)
Q Consensus       353 lp~l~a~i~E~lRl~p~~~--~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~  430 (491)
                        |++|||+|+||++|+++  +++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++
T Consensus       273 --~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~~  344 (406)
T 1s1f_A          273 --IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP------NPHV  344 (406)
T ss_dssp             --GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC--------CCCC
T ss_pred             --HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC------CCCC
Confidence              68999999999999999  7899999999999999999999999999999999999999999999984      4689


Q ss_pred             cccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCccc--cccCCCCCCCeEEEe
Q 011210          431 PFGGGSRICPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKVV  488 (491)
Q Consensus       431 ~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  488 (491)
                      |||.|+|.|+|++||++|++++++.|+++| ++++.+++.++.+  ....++..+++|++.
T Consensus       345 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          345 SFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             TTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence            999999999999999999999999999999 7999866433333  357889999999874


No 45 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=2e-61  Score=464.59  Aligned_cols=370  Identities=15%  Similarity=0.167  Sum_probs=309.4

Q ss_pred             CCchHHHHHHHHHc--CCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccccc--cccccccceeeccchhHHHH
Q 011210           68 SEPQSFIYNLFERY--GRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTST--NKLTFRGSFITASKEGQKRI  143 (491)
Q Consensus        68 ~~~~~~~~~~~~~y--G~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~--~~~~g~~~l~~~~g~~~~~~  143 (491)
                      .+++.++.+|+++|  ||  |+++++++ +.++|+||+.+++++++++.|.+......  ....+...++..+|+.|+++
T Consensus        19 ~~p~~~~~~l~~~Y~~Gp--v~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   95 (398)
T 4fb2_A           19 GTPHAFFEALRDEAETTP--IGWSEAYG-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKY   95 (398)
T ss_dssp             SSSHHHHHHHHHHHTTCS--EEEECGGG-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCCC--eEEecCCC-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHHH
Confidence            58999999999999  99  99999875 59999999999999977655554432221  11223345567899999999


Q ss_pred             HHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhc
Q 011210          144 RKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHG  222 (491)
Q Consensus       144 Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~  222 (491)
                      ||++.+ .|++++++.+.+.+.+.++++++.+...+ .+|+...+ ..++.++++. +||.+.++ ...+.+....+...
T Consensus        96 R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~~~~~~~~  171 (398)
T 4fb2_A           96 RQLVAK-PFSPEATDLFTEQLRQSTNDLIDARIELG-EGDAATWLANEIPARLTAI-LLGLPPED-GDTYRRWVWAITHV  171 (398)
T ss_dssp             HHHHHT-TTCHHHHHTTHHHHHHHHHHHHHTTTTTT-EEEHCCCCCTTHHHHHHHH-HTTSCGGG-HHHHHHHHHHHHHC
T ss_pred             HHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHhhcC-CccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHhcC
Confidence            999999 99999999999999999999999997766 79986655 6899999998 68987644 23333333333221


Q ss_pred             ccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcc
Q 011210          223 LISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAG  302 (491)
Q Consensus       223 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag  302 (491)
                                . ...+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..+++||
T Consensus       172 ----------~-~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG  233 (398)
T 4fb2_A          172 ----------E-NPEEGAEIFAELVAHARTLIAERRTNP------GNDIMSRVIMSKI-DGESLSEDDLIGFFTILLLGG  233 (398)
T ss_dssp             ----------C-CHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB-TTBCCCHHHHHHHHHHCCCCC
T ss_pred             ----------C-CHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHccc-CCCCCCHHHHHHHHHHHHHHh
Confidence                      1 224677788899999999999888742      5799999998754 344699999999999999999


Q ss_pred             cccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccce
Q 011210          303 HESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVN  382 (491)
Q Consensus       303 ~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~  382 (491)
                      +|||+++++|++++|++||++|+|+++|++                      |++|||+|+||++|+++ ++|.+.+|++
T Consensus       234 ~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~-~~R~~~~d~~  290 (398)
T 4fb2_A          234 IDNTARFLSSVFWRLAWDIELRRRLIAHPE----------------------LIPNAVDELLRFYGPAM-VGRLVTQEVT  290 (398)
T ss_dssp             CHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------------GHHHHHHHHHHHHCCBC-EEEEECSCEE
T ss_pred             hHHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------------HHHHHHHHHHHhCCCcC-CCeeeCCCEE
Confidence            999999999999999999999999999964                      57999999999999999 9999999999


Q ss_pred             eCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-e
Q 011210          383 IQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-K  461 (491)
Q Consensus       383 l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~  461 (491)
                      ++|+.||||+.|.++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.|+++| +
T Consensus       291 l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~  364 (398)
T 4fb2_A          291 VGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERT------PNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPE  364 (398)
T ss_dssp             ETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC------SCCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred             ECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCC------CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999997      46799999999999999999999999999999999 9


Q ss_pred             EeccCCCCCccccccCCCCCCCeEEEeccC
Q 011210          462 LELQNPECPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      +++.+++.........+....+||++++++
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~  394 (398)
T 4fb2_A          365 FSLDPNKECEWLMGQVAGMLHVPIIFPKGK  394 (398)
T ss_dssp             CEECTTSCCEEECSSBCEEEECEEECCCCC
T ss_pred             cEECCCCCceeccccccccceeEEEEcCCC
Confidence            999865433222345666677999998763


No 46 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=3.1e-62  Score=475.05  Aligned_cols=381  Identities=18%  Similarity=0.242  Sum_probs=302.5

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccccc-ccccccccceeeccchhHHHHHHh
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTS-TNKLTFRGSFITASKEGQKRIRKL  146 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~-~~~~~g~~~l~~~~g~~~~~~Rr~  146 (491)
                      .+++.++.++ ++|||  |+++..++  +++|++|+.+++++++++.|.+..... ....+|..+++..+|+.|+++||+
T Consensus        53 ~~p~~~~~~l-r~~gp--v~~~~~~~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~  127 (441)
T 3nc3_A           53 NNPYAYFSQL-REEDP--VHYEESID--SYFISRYHDVRYILQHPDIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI  127 (441)
T ss_dssp             HCGGGTHHHH-HHHCS--EEEETTTT--EEEECCHHHHHHHHHCTTTEECCCTTSCCCCSCC-------------CCHHH
T ss_pred             cChHHHHHHH-HhcCC--EEEeCCCC--EEEEcCHHHHHHHhcCcccccccccccccccccCCCccccCCcHHHHHHHHH
Confidence            4889999876 68999  99987655  999999999999999887665543322 233445456788899999999999


Q ss_pred             hhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccC
Q 011210          147 ATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLIS  225 (491)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  225 (491)
                      +.+ .|+++.++.+.+.+.+.++++++.|.+++ ++|+...+ ..++.++++. +||.+.++. ..+......+...+..
T Consensus       128 ~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-~~~~~~~~~~~~~~~~  203 (441)
T 3nc3_A          128 VVR-SFIGDALDHLSPLIKQNAENLLAPYLERG-KSDLVNDFGKTFAVCVTMD-MLGLDKRDH-EKISEWHSGVADFITS  203 (441)
T ss_dssp             HHH-HHHHTHHHHHHHHHHHHHHHHHTTTTTTT-EEECCCCCHHHHHHHHHHH-HTTCCGGGH-HHHHHHHHHHHHHHHC
T ss_pred             HHh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHH-HcCCCHHHH-HHHHHHHHHHHHhccc
Confidence            999 99999999999999999999999997666 89986555 5688899988 589886442 3333333333332211


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhccccc
Q 011210          226 PFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHES  305 (491)
Q Consensus       226 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~t  305 (491)
                         ...+........++.+.+.+++.+.|++++++.      .+|+++.+++..+ ++..++++++.+++..+++||+||
T Consensus       204 ---~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------~~Dll~~Ll~~~~-~~~~ls~~el~~~~~~ll~AG~eT  273 (441)
T 3nc3_A          204 ---ISQSPEARAHSLWCSEQLSQYLMPVIKERRVNP------GSDLISILCTSEY-EGMALSDKDILALILNVLLAATEP  273 (441)
T ss_dssp             ---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSC------CSSHHHHHCC-------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHhhhHH
Confidence               112222345567778889999999998887542      5799999998764 445799999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCC
Q 011210          306 SAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQG  385 (491)
Q Consensus       306 t~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g  385 (491)
                      |+++++|++++|++||++|+++++|+                      +|+++||+|+||++|+++.++|.+++|++++|
T Consensus       274 Ta~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G  331 (441)
T 3nc3_A          274 ADKTLALMIYHLLNNPEQMNDVLADR----------------------SLVPRAIAETLRYKPPVQLIPRQLSQDTVVGG  331 (441)
T ss_dssp             HHHHHHHHHHHHHTSHHHHHHHHHCG----------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEESSS
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHHhCH----------------------HHHHHHHHHhhhcCCcccCccEEECCCEEECC
Confidence            99999999999999999999999984                      58999999999999999988999999999999


Q ss_pred             eEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCC----CCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-
Q 011210          386 YFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTT----RPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-  460 (491)
Q Consensus       386 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-  460 (491)
                      +.||||+.|+++.+++||||++|+||++|+||||+....    ....++|||.|+|.|+|++||++|++++++.|+++| 
T Consensus       332 ~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~  411 (441)
T 3nc3_A          332 MEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMR  411 (441)
T ss_dssp             CEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHST
T ss_pred             EEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999976541    267899999999999999999999999999999999 


Q ss_pred             eEeccCCCCCccccccCCCCCCCeEEEec
Q 011210          461 KLELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      ++++.+++..+......++...+||++++
T Consensus       412 ~~~l~~~~~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          412 NIRLEEDFCYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             TCEECTTCCCCEECSSBCEESCCEEECC-
T ss_pred             ccEECCCCcccccCccccCcceeEEEEec
Confidence            99998766666666788999999999875


No 47 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=5.1e-61  Score=464.63  Aligned_cols=375  Identities=17%  Similarity=0.217  Sum_probs=302.4

Q ss_pred             CchHHHHHHHHHcCCcceEEeeeC--CCcEEEEeChHhHhHHhcCCcccccccc----------cccc------cccccc
Q 011210           69 EPQSFIYNLFERYGRKGIYRNHIF--GSPCVIVVAPEACKQVFLDDENFKMGYP----------TSTN------KLTFRG  130 (491)
Q Consensus        69 ~~~~~~~~~~~~yG~~~v~~~~~~--~~~~vvv~~~~~~~~i~~~~~~~~~~~~----------~~~~------~~~g~~  130 (491)
                      +++.++.+++ +|||  |+++++|  +.++++|+||+.+++++.++ .|.++..          ....      ...+..
T Consensus        21 ~p~~~~~~l~-~~Gp--v~~~~~g~~~~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (425)
T 2z3t_A           21 DPYPVYRRYR-EAAP--VHRTASGPGKPDTYYVFTYDDVVRVLSNR-RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN   96 (425)
T ss_dssp             CCHHHHHHHH-HHCS--EEEECCCSSCCCEEEECSHHHHHHHHHCT-TEESSCCCC---------------CHHHHHHTT
T ss_pred             ChHHHHHHHH-hcCC--eEeccccCCCCCeEEEcCHHHHHHHHcCC-Ccccccccccccccccccccccccccccccccc
Confidence            7899999986 5999  9999987  78899999999999999876 4544321          1111      011225


Q ss_pred             ceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhh
Q 011210          131 SFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVI  209 (491)
Q Consensus       131 ~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~  209 (491)
                      +++..+|+.|+++||++.+ .|++++++.+.+.+.+.++++++.+...+ ++|+..++ ..+++++++.+ ||.+.++ .
T Consensus        97 ~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~g-~~dl~~~~~~~~~~~vi~~~-~G~~~~~-~  172 (425)
T 2z3t_A           97 WLVFLDPPHHTELRSLLTT-EFSPSIVTGLRPRIAELASALLDRLRAQR-RPDLVEGFAAPLPILVISAL-LGIPEED-H  172 (425)
T ss_dssp             CGGGCCHHHHHHHHHHHHG-GGSHHHHHHHHHHHHHHHHHHHHHHTTSS-SCBHHHHTTTHHHHHHHHHH-HTCCGGG-H
T ss_pred             ccccCCchHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHHHHH-hCCCHHH-H
Confidence            6777899999999999999 99999999999999999999999997666 89998865 78999999998 9998653 2


Q ss_pred             hhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHH
Q 011210          210 GSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDL  289 (491)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~  289 (491)
                      ..+.+....+... ...++  ++.....+..++.+.+.+++.+.+++++++.      .+|+++.+++..++ +..++++
T Consensus       173 ~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~~-~~~ls~~  242 (425)
T 2z3t_A          173 TWLRANAVALQEA-STTRA--RDGRGYARAEAASQEFTRYFRREVDRRGGDD------RDDLLTLLVRARDT-GSPLSVD  242 (425)
T ss_dssp             HHHHHHHHHHHTT-CTTCC--C---HHHHHHHHHHHHHHHHHHHHCC-------------CHHHHHHHHHHT-TCCCCHH
T ss_pred             HHHHHHHHHHHhh-ccccC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhcc-CCCCCHH
Confidence            2333333333221 11112  2333345666777888888888888776532      56999999987643 5579999


Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCC
Q 011210          290 DIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNL  369 (491)
Q Consensus       290 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  369 (491)
                      ++.+++..+++||+|||+++++|++++|++||++|+|+++|++                      ||+|||+|+||++|+
T Consensus       243 el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~  300 (425)
T 2z3t_A          243 GIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE----------------------STPAAVEELMRYDPP  300 (425)
T ss_dssp             HHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------------GHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH----------------------hHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999999999852                      799999999999999


Q ss_pred             CCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHH
Q 011210          370 SPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEI  449 (491)
Q Consensus       370 ~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~  449 (491)
                      +++++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|+
T Consensus       301 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~  374 (425)
T 2z3t_A          301 VQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA------ERQVGFGLGIHYCLGATLARAEA  374 (425)
T ss_dssp             BCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS------SCCCTTCCSTTCCTTHHHHHHHH
T ss_pred             ccCcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC------CCCCCCCCCCccCCCHHHHHHHH
Confidence            998899999999999999999999999999999999999999999999995      46899999999999999999999


Q ss_pred             HHHHHHHHhcC-eEeccCCCC-CccccccCCCCCCCeEEEecc
Q 011210          450 SIFIHYFLLNY-KLELQNPEC-PAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       450 ~~~l~~ll~~f-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      +++++.|+++| +++ .++.. .+......++..+++|++++.
T Consensus       375 ~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~  416 (425)
T 2z3t_A          375 EIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDA  416 (425)
T ss_dssp             HHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC--
T ss_pred             HHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecch
Confidence            99999999999 899 65432 233334678889999998764


No 48 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=4.8e-61  Score=464.57  Aligned_cols=376  Identities=19%  Similarity=0.292  Sum_probs=311.4

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccc------c-c-cccccc---ccceeecc
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYP------T-S-TNKLTF---RGSFITAS  136 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~------~-~-~~~~~g---~~~l~~~~  136 (491)
                      .+++.++.++ ++||+  |++ + ++.+++++++|+.+++++.+++ |.++..      . . ....++   ..+++..+
T Consensus        26 ~~p~~~~~~l-~~~Gp--v~~-~-~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (419)
T 1q5d_A           26 EDPFPAIERL-REATP--IFY-W-DEGRSWVLTRYHDVSAVFRDER-FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   99 (419)
T ss_dssp             TCCHHHHHHH-HHHCS--EEE-E-TTTTEEEECSHHHHHHHHTCTT-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             hChHHHHHHH-HhhCC--ccc-c-CCCCEEEEecHHHHHHHHcCCC-ccccccccccccccccccchhhhhcccccccCC
Confidence            4899999998 78999  999 5 7789999999999999999876 554431      1 1 111122   35567789


Q ss_pred             chhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHH
Q 011210          137 KEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKH  215 (491)
Q Consensus       137 g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  215 (491)
                      |+.|+++||++.+ .|++++++.+.+.+.+.++++++.+...+ ++|+...+ ..+++++++.+ ||.+.++. ..+.+.
T Consensus       100 g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-~~~~~~  175 (419)
T 1q5d_A          100 PEDHARVRKLVNP-SFTSRAIDLLRAEIQRTVDQLLDARSGQE-EFDVVRDYAEGIPMRAISAL-LKVPAECD-EKFRRF  175 (419)
T ss_dssp             HHHHHHHHHHHGG-GGSHHHHGGGHHHHHHHHHHHHHHHTTSS-CEETTTTTGGGSHHHHHHHH-TTCCGGGH-HHHHHH
T ss_pred             chHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH-hCCCHHHH-HHHHHH
Confidence            9999999999999 99999999999999999999999997666 89998654 89999999998 99986542 233333


Q ss_pred             HHHHHhccc-CCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccc-cHHHHHHhhhhhcCCCCCHHHHHH
Q 011210          216 YIDYAHGLI-SPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRK-GLIDLLMEVEDENGTKLDDLDIID  293 (491)
Q Consensus       216 ~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~ll~~~~~~~~~~~~~~i~~  293 (491)
                      ...+..... ..+|+.  ....++..++...+.+++.+.|++++++.      .+ |+++.+++..+ ++..++++++.+
T Consensus       176 ~~~~~~~~~~~~~P~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~~dll~~ll~~~~-~~~~l~~~ei~~  246 (419)
T 1q5d_A          176 GSATARALGVGLVPRV--DEETKTLVASVTEGLALLHGVLDERRRNP------LENDVLTMLLQAEA-DGSRLSTKELVA  246 (419)
T ss_dssp             HHHHHHHTTTTTSSCC--CSCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSCHHHHHHHHHH-SSTTCCHHHHHH
T ss_pred             HHHHHHhcccccccCC--hHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCCHHHHHHhhhc-cCCCCCHHHHHH
Confidence            333332211 112211  12345667788889999999999887642      45 99999998753 455799999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-C
Q 011210          294 MLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-S  372 (491)
Q Consensus       294 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~  372 (491)
                      ++..+++||+|||+++++|++++|++||++|+|+++|+                      .||+|||+|+||++|+++ +
T Consensus       247 ~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~  304 (419)
T 1q5d_A          247 LVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP----------------------GLMRNALDEVLRFDNILRIG  304 (419)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------------GGHHHHHHHHHHHSCSBSSE
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH----------------------HHHHHHHHHHHHhCCccccc
Confidence            99999999999999999999999999999999999983                      379999999999999999 7


Q ss_pred             cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHH
Q 011210          373 SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIF  452 (491)
Q Consensus       373 ~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~  452 (491)
                      ++|.+.+|++++|+.||+|+.|+++.+++||||++|+||++|+||||      +..++|||.|+|.|+|++||++|++++
T Consensus       305 ~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~  378 (419)
T 1q5d_A          305 TVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD------TSASLAYGRGPHVCPGVSLARLEAEIA  378 (419)
T ss_dssp             EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCGGGCCTTHHHHHHHHHHH
T ss_pred             cceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC------CCCCCCCCCCCCcCccHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999994      357899999999999999999999999


Q ss_pred             HHHHHhcC-eEeccCCCCCccccccCCCCCCCeEEEeccC
Q 011210          453 IHYFLLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       453 l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      ++.|+++| ++++.++ .++......++..+++|++++|+
T Consensus       379 la~ll~~f~~~~~~~~-~~~~~~~~~~~~~~l~v~~~~r~  417 (419)
T 1q5d_A          379 VGTIFRRFPEMKLKET-PVFGYHPAFRNIESLNVILKPSK  417 (419)
T ss_dssp             HHHHHHHCTTCEECSC-CEECCCSSBCCEEECEEESSCC-
T ss_pred             HHHHHHhCCCeEECCC-cccccccccCCCceeEEEEecCC
Confidence            99999999 7998764 33444557889999999999874


No 49 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.6e-60  Score=458.34  Aligned_cols=373  Identities=17%  Similarity=0.197  Sum_probs=309.9

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccccccccccccceeeccchhHHHHHHhh
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTSTNKLTFRGSFITASKEGQKRIRKLA  147 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~~~~~Rr~~  147 (491)
                      .+++.++.++++ |||  |+++.   .++++|++|+.+++++.+++.|.+......... +..+++..+|+.|+++||++
T Consensus        18 ~~p~~~~~~l~~-~Gp--v~~~~---~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~-~~~~l~~~~g~~h~~~R~~~   90 (398)
T 2xkr_A           18 REARAAYRWMRA-NQP--VFRDR---NGLAAASTYQAVIDAERQPELFSNAGGIRPDQP-ALPMMIDMDDPAHLLRRKLV   90 (398)
T ss_dssp             TTHHHHHHHHHH-HCS--EEECT---TCCEEECSHHHHHHHHTCTTTEESTTCSSTTSC-CCSSGGGCCTTHHHHHHHHH
T ss_pred             cChhHHHHHHHh-cCC--eeecC---CCeEEEecHHHHHHHHhCcccccCccccCCccc-ccccccccCchHHHHHHHHh
Confidence            589999999987 999  99874   489999999999999988765554432111122 33567778999999999999


Q ss_pred             hccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHH-HHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCC
Q 011210          148 TSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTE-MRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISP  226 (491)
Q Consensus       148 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  226 (491)
                      .+ .|++++++.+.+.+.+.++++++.+..++ ++|+... ...+++++++.+ ||.+.++. ..+.+....+....   
T Consensus        91 ~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~~~~vi~~~-fG~~~~~~-~~~~~~~~~~~~~~---  163 (398)
T 2xkr_A           91 NA-GFTRKRVKDKEASIAALCDTLIDAVCERG-ECDFVRDLAAPLPMAVIGDM-LGVRPEQR-DMFLRWSDDLVTFL---  163 (398)
T ss_dssp             GG-GSCHHHHHTTHHHHHHHHHHHHHTTTTTS-EEEHHHHTTTHHHHHHHHHH-HTCCGGGH-HHHHHHHHHHHHHH---
T ss_pred             hh-hhCHHHHHHHHHHHHHHHHHHHHhhhhcC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH-HHHHHHHHHHHhcc---
Confidence            99 99999999999999999999999997666 8999955 568999999998 99986542 23333333333221   


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccH
Q 011210          227 FPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESS  306 (491)
Q Consensus       227 ~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt  306 (491)
                      .+.++| ....+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..+++||+|||
T Consensus       164 ~~~~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTt  235 (398)
T 2xkr_A          164 SSHVSQ-EDFQITMDAFAAYNDFTRATIAARRADP------TDDLVSVLVSSEV-DGERLSDDELVMETLLILIGGDETT  235 (398)
T ss_dssp             TSCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHSHHH
T ss_pred             Ccccch-hhHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhHHH
Confidence            223333 2344566778888999999998887632      5799999998754 4446999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCCe
Q 011210          307 AHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQGY  386 (491)
Q Consensus       307 ~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~  386 (491)
                      +++++|++++|++||++|+|+++|++                      |++|||+|+||++|+++.++|.+.+|++++|+
T Consensus       236 ~~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~  293 (398)
T 2xkr_A          236 RHTLSGGTEQLLRNRDQWDLLQRDPS----------------------LLPGAIEEMLRWTAPVKNMCRVLTADTEFHGT  293 (398)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHHCGG----------------------GHHHHHHHHHHHHCSBCEEEEEESSCEEETTE
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHhCHH----------------------HHHHHHHHHHhhcccccCcceEECCCeeECCE
Confidence            99999999999999999999999953                      78999999999999999989999999999999


Q ss_pred             EeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEecc
Q 011210          387 FIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-KLELQ  465 (491)
Q Consensus       387 ~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~  465 (491)
                      .||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       294 ~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  367 (398)
T 2xkr_A          294 ALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNP------NSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLV  367 (398)
T ss_dssp             EECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSS------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEES
T ss_pred             EECCCCEEEeChhhhcCChhhCCCCCeeCCCCCC------CCCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceEC
Confidence            9999999999999999999999999999999974      3499999999999999999999999999999999 59987


Q ss_pred             CCCCCc---cccccCCCCCCCeEEEeccC
Q 011210          466 NPECPA---EYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       466 ~~~~~~---~~~~~~~~~~~~~~~~~~~~  491 (491)
                      ++ .++   ......++..+++|+++++.
T Consensus       368 ~~-~~~~~~~~~~~~~~~~~lpv~~~p~~  395 (398)
T 2xkr_A          368 AD-DSVLPLRPANFVSGLESMPVVFTPSP  395 (398)
T ss_dssp             CT-TCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred             CC-cceecccCcccccCccceeEEecCCC
Confidence            43 334   33456788899999998763


No 50 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=2.7e-60  Score=458.11  Aligned_cols=369  Identities=20%  Similarity=0.292  Sum_probs=305.9

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCccccccccc-----cccccccccceeeccchhHH
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYPT-----STNKLTFRGSFITASKEGQK  141 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~g~~~l~~~~g~~~~  141 (491)
                      .+++.++.++ ++|||  |+++++ ++.++++++||+.+++++.+++ +.+....     .+....+..+++..+|+.|+
T Consensus        37 ~~p~~~~~~l-~~yGp--v~~~~~~g~~~~vvv~~~~~i~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  112 (417)
T 2y5n_A           37 LTLAGRYGEL-QETEP--VSRVRPPYGEEAWLVTRYEDVRAVLGDGR-FVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS  112 (417)
T ss_dssp             CCCCHHHHHH-HHHCS--EEEEECSBSCCEEEECSHHHHHHHHTCTT-EESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred             cCchHHHHHH-HhcCC--eEeeccCCCceEEEECCHHHHHHHHcCCC-cccCccccccccccCcccccccCccCCchHHH
Confidence            4899999999 89999  999997 7899999999999999998864 3332211     11122233567778999999


Q ss_pred             HHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhHHHHHHHHH
Q 011210          142 RIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSVEKHYIDYA  220 (491)
Q Consensus       142 ~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~  220 (491)
                      ++||++.+ .|++++++.+.+.+.+.++++++.+..++.++|+...+. .++.++++. +||.+.++.     +.+....
T Consensus       113 ~~R~~l~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~-----~~~~~~~  185 (417)
T 2y5n_A          113 RLRRLVVK-AFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICE-LLGVPSADH-----DRFTRWS  185 (417)
T ss_dssp             HHHHHHHH-HSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-----HHHHHHH
T ss_pred             HHHHHHhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHH-----HHHHHHH
Confidence            99999999 899999999999999999999999864332799998774 699999998 699876431     2233333


Q ss_pred             hcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHh
Q 011210          221 HGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLS  300 (491)
Q Consensus       221 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~  300 (491)
                      ..+.....  .|   ..+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..+++
T Consensus       186 ~~~~~~~~--~~---~~~~~~~~~~l~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~  253 (417)
T 2y5n_A          186 GAFLSTAE--VT---AEEMQEAAEQAYAYMGDLIDRRRKEP------TDDLVSALVQARD-QQDSLSEQELLDLAIGLLV  253 (417)
T ss_dssp             HTTSTTCC--CC---HHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHH
T ss_pred             HHHhcccC--CC---HHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHH
Confidence            33332111  11   34667778889999999999887642      4699999998754 3446999999999999999


Q ss_pred             cccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC--Ccceeec
Q 011210          301 AGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP--SSFREAE  378 (491)
Q Consensus       301 ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~~r~~~  378 (491)
                      ||+|||+++++|++++|++||++|+|+++|+                      .||+|||+|+||++|+++  +++|.+.
T Consensus       254 AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~  311 (417)
T 2y5n_A          254 AGYESTTTQIADFVYLLMTRPELRRQLLDRP----------------------ELIPSAVEELTRWVPLGVGTAFPRYAV  311 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------------GGHHHHHHHHHHHCCCBSSCCSCEEES
T ss_pred             HhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH----------------------HHHHHHHHHHHHhcCCccccccceEeC
Confidence            9999999999999999999999999999984                      268999999999999999  7899999


Q ss_pred             ccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHh
Q 011210          379 ADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLL  458 (491)
Q Consensus       379 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~  458 (491)
                      +|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.|++
T Consensus       312 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~  385 (417)
T 2y5n_A          312 EDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT------PNQHLGFGHGVHHCLGAPLARVELQVALEVLLQ  385 (417)
T ss_dssp             SCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS------SCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCC------CCCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998      356899999999999999999999999999999


Q ss_pred             cC-eEeccCCCCCccc--cccCCCCCCCeEEE
Q 011210          459 NY-KLELQNPECPAEY--LPVPRPSDQCLAKV  487 (491)
Q Consensus       459 ~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  487 (491)
                      +| ++++.+++.++.+  ....++...+||++
T Consensus       386 ~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          386 RLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             HCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             hCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            99 5998765333333  34678889999874


No 51 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=2.2e-60  Score=458.01  Aligned_cols=369  Identities=20%  Similarity=0.285  Sum_probs=307.9

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc-------------cc-ccc--ccccc
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT-------------ST-NKL--TFRGS  131 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~-------------~~-~~~--~g~~~  131 (491)
                      .+++.++.++ ++|||  |+++++++.+++++++|+.+++++.++ .|.+....             .+ ...  .+..+
T Consensus        14 ~~p~~~~~~l-~~yGp--v~~~~~~~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (404)
T 1z8o_A           14 VDWYRTYAEL-RETAP--VTPVRFLGQDAWLVTGYDEAKAALSDL-RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN   89 (404)
T ss_dssp             SSHHHHHHHH-HHHCS--EEEEEETTEEEEEECSHHHHHHHHHCT-TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred             cCcHHHHHHH-HhcCC--eeeecCCCceEEEEcCHHHHHHHHcCC-Cccccccccccccccccccccccccchhhhcccc
Confidence            4899999999 99999  999999888999999999999999987 44433211             11 110  12356


Q ss_pred             eeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhh
Q 011210          132 FITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIG  210 (491)
Q Consensus       132 l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~  210 (491)
                      ++..+|+.|+++||++.+ .|++++++.+.+.+.+.++++++.+..++ ++|+...+ ..++.++++. +||.+.++ ..
T Consensus        90 l~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~  165 (404)
T 1z8o_A           90 MGTSDPPTHTRLRKLVSQ-EFTVRRVEAMRPRVEQITAELLDEVGDSG-VVDIVDRFAHPLPIKVICE-LLGVDEKY-RG  165 (404)
T ss_dssp             GGGCCTTHHHHHHHHHHT-TSCHHHHHHTHHHHHHHHHHHHHTSCSSS-EEEHHHHTTTHHHHHHHHH-HTTCCGGG-TT
T ss_pred             cccCCCcHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHhHHHHHHHHHH-HhCCCHHH-HH
Confidence            777899999999999999 99999999999999999999999997655 89999766 6899999998 49987653 23


Q ss_pred             hHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhh-hhhcCCCCCHH
Q 011210          211 SVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEV-EDENGTKLDDL  289 (491)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~~~~  289 (491)
                      .+.+.+..+.. .   .+   |.  ..+..++...+.+++.+.|++++++.      .+|+++.+++. .+ ++..++++
T Consensus       166 ~~~~~~~~~~~-~---~~---p~--~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~~-~~~~l~~~  229 (404)
T 1z8o_A          166 EFGRWSSEILV-M---DP---ER--AEQRGQAAREVVNFILDLVERRRTEP------GDDLLSALIRVQDD-DDGRLSAD  229 (404)
T ss_dssp             THHHHHHHHHC-C---CG---GG--HHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCEET-TTEECCHH
T ss_pred             HHHHHHHHHhc-c---CC---hh--HHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhhhcc-cCCCCCHH
Confidence            34443333332 1   11   21  45667788889999999998887642      56999999986 43 34468999


Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCC
Q 011210          290 DIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNL  369 (491)
Q Consensus       290 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  369 (491)
                      ++.+++..+++||+|||+++++|++++|++||++|+|+++|++                      ||+|||+|+||++|+
T Consensus       230 ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~  287 (404)
T 1z8o_A          230 ELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS----------------------ALPNAVEEILRYIAP  287 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------------GHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------------hHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999842                      689999999999999


Q ss_pred             CCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHH
Q 011210          370 SPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEI  449 (491)
Q Consensus       370 ~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~  449 (491)
                      +++++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|+
T Consensus       288 ~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~  361 (404)
T 1z8o_A          288 PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT------RGHLSFGQGIHFCMGRPLAKLEG  361 (404)
T ss_dssp             SCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------TTCCTTCSSTTCCTTHHHHHHHH
T ss_pred             ccCcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC------CCccCCCCCCccCCcHHHHHHHH
Confidence            998899999999999999999999999999999999999999999999983      46899999999999999999999


Q ss_pred             HHHHHHHHhcC-eEeccCCCCCccc--cccCCCCCCCeEEEe
Q 011210          450 SIFIHYFLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKVV  488 (491)
Q Consensus       450 ~~~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  488 (491)
                      +++++.|+++| ++++.+++.+..+  ....++..+++|++.
T Consensus       362 ~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~~  403 (404)
T 1z8o_A          362 EVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRLD  403 (404)
T ss_dssp             HHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEETT
T ss_pred             HHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEeC
Confidence            99999999999 5998765333333  446789999999874


No 52 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1.3e-61  Score=467.18  Aligned_cols=373  Identities=15%  Similarity=0.209  Sum_probs=304.9

Q ss_pred             CCchHHHHHHHHHcCCcceE-----EeeeCCCcEEEEeChHhHhHHhcCCcccccccccc--cc--cc---ccccceeec
Q 011210           68 SEPQSFIYNLFERYGRKGIY-----RNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTS--TN--KL---TFRGSFITA  135 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~-----~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~--~~--~~---~g~~~l~~~  135 (491)
                      .+++.++.++ ++|||  |+     ++++  .++++|+||+.+++++.+++.|.++....  +.  .+   .+..+++..
T Consensus        25 ~~p~~~~~~l-~~~Gp--v~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~   99 (414)
T 2uuq_A           25 PNPWPMYRAL-RDHDP--VHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQ   99 (414)
T ss_dssp             TCCHHHHHHH-HHHCS--EEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred             cCchHHHHHH-HhcCC--EEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCCCcccccCcccccccccccccccC
Confidence            4789999988 47999  99     8876  68999999999999999875565543221  21  22   223567778


Q ss_pred             cchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHH-HHHHHHHHHHHHHhcCCCCchhhhhHHH
Q 011210          136 SKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLT-EMRKATFKIIANIFLGSSSDSVIGSVEK  214 (491)
Q Consensus       136 ~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~~  214 (491)
                      +|+.|+++||++++ .|++++++.+.+.+.+.++++++.+...+ ++|+.. .+..+++++++. +||.+.++ .+.+.+
T Consensus       100 ~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~vdl~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~  175 (414)
T 2uuq_A          100 DPPVHTEFRKLVSR-GFTPRQVETVEPTVRKFVVERLEKLRANG-GGDIVTELFKPLPSMVVAH-YLGVPEED-WTQFDG  175 (414)
T ss_dssp             CTTHHHHHHHHHHT-TSSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEHHHHTTTHHHHHHHHH-HTTCCGGG-HHHHHH
T ss_pred             CchhHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccHHHHHHHHhHHHHHHH-HhCCCHHH-HHHHHH
Confidence            99999999999999 99999999999999999999999997666 799974 567999999998 69998753 223333


Q ss_pred             HHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhh-cCCCCCHHHHHH
Q 011210          215 HYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDE-NGTKLDDLDIID  293 (491)
Q Consensus       215 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~-~~~~~~~~~i~~  293 (491)
                      ....+....  .+   .|..  .+..++...+.+++.+.+++++++.      .+|+++.+++..++ ++..++++++.+
T Consensus       176 ~~~~~~~~~--~~---~p~~--~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~~~~~~~ls~~ei~~  242 (414)
T 2uuq_A          176 WTQAIVAAN--AV---DGAT--TGALDAVGSMMAYFTGLIERRRTEP------ADDAISHLVAAGVGADGDTAGTLSILA  242 (414)
T ss_dssp             HHHHHHHHH--HC----------CCHHHHHHHHHHHHHHHHHHTTSC------CSSHHHHHHHTTTTCTTCHHHHHHHHH
T ss_pred             HHHHHHhhc--cc---CCch--hHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhcccccCCCCCCHHHHHH
Confidence            322222210  01   0211  2345677788889999998876541      56999999987532 344589999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc
Q 011210          294 MLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS  373 (491)
Q Consensus       294 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  373 (491)
                      ++..+++||+|||+++++|++++|++||++|+|+++|+                      +||+|||+|+||++|+++++
T Consensus       243 ~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~  300 (414)
T 2uuq_A          243 FTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP----------------------EGIPDAVEELLRLTSPVQGL  300 (414)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG----------------------GGHHHHHHHHHHHHCSBCCE
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH----------------------HHHHHHHHHHHHhCCCcCCc
Confidence            99999999999999999999999999999999999985                      38999999999999999988


Q ss_pred             ceeecccceeCCeEeCCCCEEEEcccccccCCCCC-CCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHH
Q 011210          374 FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENY-PDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIF  452 (491)
Q Consensus       374 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~  452 (491)
                      +|.+.+|++++|+.||||+.|+++.+++||||++| +||++|+||||.      ..++|||.|+|.|+|+.||++|++++
T Consensus       301 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~------~~~~~FG~G~r~C~G~~lA~~e~~~~  374 (414)
T 2uuq_A          301 ARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP------RNILTFSHGAHHCLGAAAARMQCRVA  374 (414)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC------CSCCTTCSSTTCCTTHHHHHHHHHHH
T ss_pred             ceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC------CCCcCCCCCCccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999 999999999984      46899999999999999999999999


Q ss_pred             HHHHHhcC-eEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          453 IHYFLLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       453 l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      ++.|+++| ++++.+++.++....+.++..+++|++++|
T Consensus       375 la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          375 LTELLARCPDFEVAESRIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             HHHHHHHCCSEEECGGGCEECCCSSBCCEEECEEEEC--
T ss_pred             HHHHHHhCcccEECCCCccccccccccCcceeEEEecCC
Confidence            99999999 699874333344445788999999999976


No 53 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=3.9e-61  Score=474.86  Aligned_cols=400  Identities=16%  Similarity=0.225  Sum_probs=299.5

Q ss_pred             cCCCCCCCCCCccccccHHHHhhhhcC-CchHHHHHHHHHcCCcceEEeeeCC-------CcEEEEeChHhHhHHhcC--
Q 011210           42 KHSLPPGDMGWPLVGNMLSHQKAFKSS-EPQSFIYNLFERYGRKGIYRNHIFG-------SPCVIVVAPEACKQVFLD--  111 (491)
Q Consensus        42 ~~~~pPgp~~~P~~G~~~~~~~~~~~~-~~~~~~~~~~~~yG~~~v~~~~~~~-------~~~vvv~~~~~~~~i~~~--  111 (491)
                      +.+.||||.|||++|++.++.+.++.. +++.++.+++++||+. ||++++++       +..+++++....+.++..  
T Consensus         7 Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~-vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~   85 (473)
T 3dan_A            7 PLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQST-VFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK   85 (473)
T ss_dssp             CBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCS-EEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred             CCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCe-EEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence            456779999999999999987655556 8999999999999986 99999863       344555665555555542  


Q ss_pred             ---Ccccccccccccccccc---ccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc----CCCC
Q 011210          112 ---DENFKMGYPTSTNKLTF---RGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS----LDTP  181 (491)
Q Consensus       112 ---~~~~~~~~~~~~~~~~g---~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~  181 (491)
                         ...+...++... .++|   ..+++..+++.|+++|+++.+ .|+++ +..+.+.+.+.++++++.|..    ++ +
T Consensus        86 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~h~~~R~~~~~-~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~-~  161 (473)
T 3dan_A           86 VEKKDLFTGTYMPST-KLTGGYRVLSYLDPSEPRHAQLKNLLFF-MLKNS-SNRVIPQFETTYTELFEGLEAELAKNG-K  161 (473)
T ss_dssp             EECSSCTTSSSCCCG-GGGTTSCCGGGCCTTSHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHS-C
T ss_pred             eeccccccccccCCc-cccCCCcceeeeCCCcHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCC-c
Confidence               122333333333 3344   234566789999999999999 88884 899999999999999999853    34 8


Q ss_pred             eehHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhccc--CCCCC---CCCCcchHHHHHHHHHHHHHhHHHHHH
Q 011210          182 IEFLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLI--SPFPI---NLPGFSFHKAMKARDMLGEILQPVLNE  256 (491)
Q Consensus       182 vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~p~~~~~~~~~~~~~l~~~~~~~i~~  256 (491)
                      +|+.+++..++++++++++||.+.+.  .++.+.+..+...+.  ..+|.   .+|.               ++.+.+.+
T Consensus       162 vdl~~~~~~~~~~~i~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~lp~---------------~~~~~~~~  224 (473)
T 3dan_A          162 AAFNDVGEQAAFRFLGRAYFNSNPEE--TKLGTSAPTLISSWVLFNLAPTLDLGLPW---------------FLQEPLLH  224 (473)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSCCGGG--STTTTCHHHHHHHHHHHHHGGGCCCSCCH---------------HHHHHHHS
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCCCc--hhhhhhHHHHHHHHHHHhccchhhhcchH---------------HHHHHHhh
Confidence            99999999999999999999998655  222222222222111  00222   3331               11111111


Q ss_pred             HHH--------chhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHH-hcccccHHHHHHHHHHHHhh-CchHHHH
Q 011210          257 RRA--------MKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFL-SAGHESSAHIATWALIHLHK-HPQTLRK  326 (491)
Q Consensus       257 ~~~--------~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~  326 (491)
                      +++        ...+..+.-.|+++.+++..++.  .++++++..+++.+. ++|++||+++++|++++|++ ||++|++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~  302 (473)
T 3dan_A          225 TFRLPAFLIKSTYNKLYDYFQSVATPVMEQAEKL--GVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQ  302 (473)
T ss_dssp             SSCCCGGGTHHHHHHHHHHHHHHCHHHHHHHHHH--TCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             hccchHhhhhhchhhhHHHHHHHHHHHHHhHhhc--CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHH
Confidence            100        00000000235555566654432  599999998886666 78889999999999999999 7999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee----CCeEeCCCCEEEEcccccc
Q 011210          327 AKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI----QGYFIPKGWKVLVYNRGVH  402 (491)
Q Consensus       327 lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~ip~G~~v~~~~~~~~  402 (491)
                      ||+|++++++.. .+.. ++.+++++||||+|||+|+||++|+++...|.+.+|+++    +|+.||||+.|.++.+++|
T Consensus       303 lr~Ei~~~~~~~-~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~  380 (473)
T 3dan_A          303 LAEEIRGAIKSY-GDGN-VTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFAT  380 (473)
T ss_dssp             HHHHHHHHHHHH-STTS-CCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHT
T ss_pred             HHHHHHHHhhcc-cCCC-CCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhh
Confidence            999999998751 1233 899999999999999999999999999887889999999    9999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCccccc---------CCCCCCccHHHHHHHHHHHHHHHHhcCeEeccCC
Q 011210          403 YNPENYPDPKQFDPSRWDNHTTRPGSFIPFG---------GGSRICPGADLAKLEISIFIHYFLLNYKLELQNP  467 (491)
Q Consensus       403 ~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg---------~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  467 (491)
                      |||++|+||++|+||||++.......+++||         +|+|.|+|++||++|++++++.|+++|++...++
T Consensus       381 ~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  454 (473)
T 3dan_A          381 KDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL  454 (473)
T ss_dssp             TCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CCchhcCCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence            9999999999999999998643334445555         5559999999999999999999999999765543


No 54 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.9e-60  Score=457.71  Aligned_cols=371  Identities=19%  Similarity=0.300  Sum_probs=305.0

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccc----cc--ccc---ccc---cccceeec
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGY----PT--STN---KLT---FRGSFITA  135 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~----~~--~~~---~~~---g~~~l~~~  135 (491)
                      ++++..+.+| ++||+  |+++++++.++++++||+.+++++.+++. .+..    ..  ...   .+.   +..+++..
T Consensus        15 ~~p~~~~~~l-~~yGp--v~~~~~~~~~~vvv~~~~~v~~vl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   90 (408)
T 1odo_A           15 ADHHTEHRTL-REGGP--ATWVDVLGVQAWSVSDPVLLKQLLTSSDV-SKDARAHWPAFGEVVGTWPLALWVAVENMFTA   90 (408)
T ss_dssp             TTHHHHHHHH-HTTCS--EEEEEETTEEEEEECCHHHHHHHTTCTTE-ESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred             CChHHHHHHH-HHhCC--eEEeccCCCCEEEECCHHHHHHHHcCCCc-cccccccccccccccccccccccccccccccc
Confidence            5899999999 99999  99999988899999999999999987642 2111    10  000   111   22467778


Q ss_pred             cchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhh--cCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhH
Q 011210          136 SKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWA--SLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSV  212 (491)
Q Consensus       136 ~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~  212 (491)
                      +|+.|+++||++.+ .|++.+++.+.+.+.+.++++++.+.  ..++++|+...+. .+++++++. +||.+.++ ...+
T Consensus        91 ~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~  167 (408)
T 1odo_A           91 YGPNHRKLRRLVAP-AFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-RDGF  167 (408)
T ss_dssp             CHHHHHHHHHTTGG-GGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-HHHH
T ss_pred             CChHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-HHHH
Confidence            99999999999999 99999999999999999999999986  3245899999887 599999996 79987543 2233


Q ss_pred             HHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhc--CCCCCHHH
Q 011210          213 EKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDEN--GTKLDDLD  290 (491)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~~~~~  290 (491)
                      .+.+..+..     .  .   ....+..++...+.+++.+.+++++++.      .+|+++.+++..+++  +..+++++
T Consensus       168 ~~~~~~~~~-----~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~~~~~~~~l~~~e  231 (408)
T 1odo_A          168 RALVDGVFD-----T--T---LDQAEAQANTARLYEVLDQLIAAKRATP------GDDMTSLLIAARDDEGDGDRLSPEE  231 (408)
T ss_dssp             HHHHHHHHC-----T--T---CCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHHCC-----CCCHHH
T ss_pred             HHHHHHHhc-----c--c---CCHHHHHHHHHHHHHHHHHHHHHHhhCC------CCCHHHHHHHhcccccccCCCCHHH
Confidence            333332222     0  0   1234566778889999999998887642      468999999876432  45699999


Q ss_pred             HHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCC
Q 011210          291 IIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLS  370 (491)
Q Consensus       291 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~  370 (491)
                      +.+++..+++||+|||+++++|++++|++||++|+|+++|+                      .|++|||+|+||++|++
T Consensus       232 i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~----------------------~~l~a~i~E~lRl~p~~  289 (408)
T 1odo_A          232 LRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE----------------------VTWADVVEETLRHEPAV  289 (408)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS----------------------SCHHHHHHHHHHHSCSB
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH----------------------HHHHHHHHHHHhhCCCc
Confidence            99999999999999999999999999999999999999973                      25899999999999999


Q ss_pred             CC-cceeecccceeC-CeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHH
Q 011210          371 PS-SFREAEADVNIQ-GYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLE  448 (491)
Q Consensus       371 ~~-~~r~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~  448 (491)
                      +. ++|.+.+|++++ |+.||||+.|+++.+++||||++|+||++|+|||+      ...++|||.|+|.|+|++||++|
T Consensus       290 ~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~pFG~G~r~C~G~~lA~~e  363 (408)
T 1odo_A          290 KHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT------VKEHLAFGHGVHFCLGAPLARME  363 (408)
T ss_dssp             SCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS------CCCCCTTCSSTTSCTTHHHHHHH
T ss_pred             cCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC------CCCCCCCCCCCccCCCHHHHHHH
Confidence            84 899999999999 99999999999999999999999999999999994      46799999999999999999999


Q ss_pred             HHHHHHHHHhcC-eEeccCCCCCcccc--ccCCCCCCCeEEEec
Q 011210          449 ISIFIHYFLLNY-KLELQNPECPAEYL--PVPRPSDQCLAKVVG  489 (491)
Q Consensus       449 ~~~~l~~ll~~f-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  489 (491)
                      ++++++.|+++| ++++..++.++.+.  .+.++..+++|++++
T Consensus       364 ~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          364 VTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             HHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             HHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            999999999999 79987554444443  468899999999875


No 55 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=4.9e-61  Score=463.16  Aligned_cols=370  Identities=18%  Similarity=0.227  Sum_probs=304.2

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccccccc--cc-----ccc---cccccceeecc
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYP--TS-----TNK---LTFRGSFITAS  136 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~--~~-----~~~---~~g~~~l~~~~  136 (491)
                      .+++..+.+| ++||+  |+++++ ++.++++++||+.+++++.+++ +.+...  ..     +..   ..+ .+++..+
T Consensus        24 ~~p~~~~~~l-~~yGp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~   98 (408)
T 3abb_A           24 YQPPKAYEER-RGESP--LTQVTLFDGRPAWLITGHAEGRALLVDPR-LSSDWGHPDFPVVVRRTEDRGGLA-FPLIGVD   98 (408)
T ss_dssp             TSCCHHHHHH-CCSSS--EEEEECTTSCEEEEECCHHHHHHHHTCTT-EECCTTSTTCCCCC---------C-CTTTTCC
T ss_pred             cCchHHHHHH-HhcCC--eeeeecCCCCcEEEEeCHHHHHHHHcCCC-cccccccccccccccCCccccccc-cccccCC
Confidence            4889999999 89999  999998 7889999999999999998764 222111  00     111   012 3566789


Q ss_pred             chhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhHHHH
Q 011210          137 KEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSVEKH  215 (491)
Q Consensus       137 g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~  215 (491)
                      |+.|+++||++.+ .|++++++.+.+.+.+.++++++.+...+.++|+...+. .++.++++. +||.+.++ ...+...
T Consensus        99 g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~  175 (408)
T 3abb_A           99 DPVHARQRRMLIP-SFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICE-LLGVPYGD-HDFFEEC  175 (408)
T ss_dssp             TTHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHHHHHH
T ss_pred             chHHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-HHHHHHH
Confidence            9999999999999 899999999999999999999999976445899999886 488999987 79998643 2223222


Q ss_pred             HHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHH
Q 011210          216 YIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDML  295 (491)
Q Consensus       216 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~  295 (491)
                      +.    .+.. .+  .+    .+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++
T Consensus       176 ~~----~~~~-~~--~~----~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~-~~~~ls~~ei~~~~  237 (408)
T 3abb_A          176 SR----NFVG-AA--TS----AEADAAFGELYTYLHGLVGRKQAEP------EDGLLDELIARQL-EEGDLDHDEVVMIA  237 (408)
T ss_dssp             HH----HHC-------------CCSSHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHHH-TSSSCCHHHHHHHH
T ss_pred             HH----HHhc-cc--ch----HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhccc-CCCCCCHHHHHHHH
Confidence            22    2222 11  11    2344566778888999998887642      4689999998764 34469999999999


Q ss_pred             HHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcce
Q 011210          296 ISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFR  375 (491)
Q Consensus       296 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r  375 (491)
                      ..+++||+|||+++++|++++|++||++|+|+++|++                      |++|||+|+||++|++++++|
T Consensus       238 ~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~----------------------~l~a~i~E~lRl~p~~~~~~R  295 (408)
T 3abb_A          238 LVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG----------------------AVSGVVEELLRFTSVSDHIVR  295 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH----------------------HHHHHHHHHHHHHCSSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------------hHHHHHHHHHHhcCcccccce
Confidence            9999999999999999999999999999999998753                      689999999999999998899


Q ss_pred             eecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHH
Q 011210          376 EAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHY  455 (491)
Q Consensus       376 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~  455 (491)
                      .+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.
T Consensus       296 ~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~  369 (408)
T 3abb_A          296 MAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN------ARHHVGFGHGIHQCLGQNLARAELEIALGG  369 (408)
T ss_dssp             EESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHH
T ss_pred             EeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999996      457999999999999999999999999999


Q ss_pred             HHhcC-eEeccCCCCCccc--cccCCCCCCCeEEEeccC
Q 011210          456 FLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       456 ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  491 (491)
                      |+++| ++++..++.+..+  ....++..++||++++|.
T Consensus       370 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          370 LFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             HHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred             HHHhCccceecCCccccccccCcccCCcceeEEEeCCCC
Confidence            99999 8998754333333  346889999999999874


No 56 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=1.1e-60  Score=462.61  Aligned_cols=375  Identities=17%  Similarity=0.198  Sum_probs=309.8

Q ss_pred             CCchHHHHHHHHHcC-CcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccccccccc--ccccceeeccchhHHHHH
Q 011210           68 SEPQSFIYNLFERYG-RKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTSTNKL--TFRGSFITASKEGQKRIR  144 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG-~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~~~~--~g~~~l~~~~g~~~~~~R  144 (491)
                      .+++.++.++++++| |  |+++..++ ++++|++|+.+++++++++.|.+.........  .+..+++..+|+.|+++|
T Consensus        38 ~dp~~~~~~lr~~~G~p--v~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R  114 (421)
T 3lxh_A           38 QGFHEAWKRVQQPDTPP--LVWTPFTG-GHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYR  114 (421)
T ss_dssp             GCHHHHHHHHCCTTCCS--EEEESSTT-SEEEECSHHHHHHHHTCTTTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHH
T ss_pred             cChhHHHHHHHhcCCCC--eEeccCCC-CeEEEcCHHHHHHHHcChhhccCCcccCCcccccccccCCccCCcHHHHHHH
Confidence            489999998887765 8  99998765 59999999999999977666655432211111  122456678999999999


Q ss_pred             HhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcc
Q 011210          145 KLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGL  223 (491)
Q Consensus       145 r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~  223 (491)
                      +++.+ .|++++++.+.+.+.+.++++++.+...+ .+|+...+ ..++.++++. +||.+.++ ...+.+....+.   
T Consensus       115 ~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~~~~v~~~-~~G~~~~~-~~~~~~~~~~~~---  187 (421)
T 3lxh_A          115 KAIDK-GLNLAEIRKLEDQIRTIAVEIIEGFADRG-HCEFGSEFSTVFPVRVFLA-LAGLPVED-ATKLGLLANEMT---  187 (421)
T ss_dssp             HHHHH-HHSHHHHHTTHHHHHHHHHHHHHTTTTTS-EEEHHHHTTTTHHHHHHHH-HHTCCGGG-HHHHHHHHHHHH---
T ss_pred             HHHhh-hcCHHHHHHHHHHHHHHHHHHHHHHhhcC-CeehHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHh---
Confidence            99999 99999999999999999999999997666 89987776 4566666665 58987644 233333333332   


Q ss_pred             cCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhccc
Q 011210          224 ISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGH  303 (491)
Q Consensus       224 ~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~  303 (491)
                       . ...++|.....+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..+++||+
T Consensus       188 -~-~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~l~~~ei~~~~~~l~~AG~  258 (421)
T 3lxh_A          188 -R-PSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGS------GTDLITRILNVEI-DGKPMPDDRALGLVSLLLLGGL  258 (421)
T ss_dssp             -S-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------CCSHHHHHHTSCB-TTBCCCHHHHHHHHHHHHHHHH
T ss_pred             -c-cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhhhc-cCCCCCHHHHHHHHHHHHHHhH
Confidence             2 11234444456778888999999999999887652      6799999998754 4457999999999999999999


Q ss_pred             ccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeeccccee
Q 011210          304 ESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNI  383 (491)
Q Consensus       304 ~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l  383 (491)
                      |||+++++|++++|++||++|+|+++|++                      |+++||+|+||++|++ .++|.+++|+++
T Consensus       259 eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~l  315 (421)
T 3lxh_A          259 DTVVNFLGFMMIYLSRHPETVAEMRREPL----------------------KLQRGVEELFRRFAVV-SDARYVVSDMEF  315 (421)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHCHH----------------------HHHHHHHHHHHHCCCB-EEEEEECSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------------HHHHHHHHHHHhcCcc-CCceeeCCCeeE
Confidence            99999999999999999999999999975                      6899999999999999 999999999999


Q ss_pred             CCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-eE
Q 011210          384 QGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-KL  462 (491)
Q Consensus       384 ~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~  462 (491)
                      +|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.|+++| ++
T Consensus       316 ~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~  389 (421)
T 3lxh_A          316 HGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEF  389 (421)
T ss_dssp             TTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCc
Confidence            999999999999999999999999999999999994      67899999999999999999999999999999999 99


Q ss_pred             eccCCCCCccccccCCCCCCCeEEEecc
Q 011210          463 ELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      ++.+++.........+....+||+++++
T Consensus       390 ~l~~~~~~~~~~~~~~~~~~lpv~~~p~  417 (421)
T 3lxh_A          390 RLKDRAVPIYHSGIVAAVENIPLEWEPQ  417 (421)
T ss_dssp             EECTTCCCEEECSSBCEEECCEEECCCC
T ss_pred             EECCCCCceeccccccCceeeeEEEecc
Confidence            9985543333334566677899999876


No 57 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=9.9e-61  Score=460.86  Aligned_cols=373  Identities=18%  Similarity=0.280  Sum_probs=308.3

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCccccccc---cc----ccc---ccc---c-ccce
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGY---PT----STN---KLT---F-RGSF  132 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~---~~----~~~---~~~---g-~~~l  132 (491)
                      .+++.++.++ ++|||  |+++++ ++.++++++||+++++++.+++. .+..   ..    ...   .+.   + ..++
T Consensus        17 ~~p~~~~~~l-~~yGp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (411)
T 1gwi_A           17 TDLDGESARL-RAAGP--LAAVELPGGVPVWAVTHHAEAKALLTDPRL-VKDINVWGAWRRGEIPADWPLIGLANPGRSM   92 (411)
T ss_dssp             SCHHHHHHHH-HHTCS--EEEEEETTTEEEEEECSHHHHHHHHTCTTE-ECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred             CChHHHHHHH-HHhCC--eeeeecCCCccEEEEeCHHHHHHHHcCCcc-ccCcccccccccccCCcccchhhhhcccccc
Confidence            4789999999 99999  999998 78899999999999999988652 2211   10    000   011   2 3467


Q ss_pred             eeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhh
Q 011210          133 ITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGS  211 (491)
Q Consensus       133 ~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~  211 (491)
                      +..+|+.|+++|+++.+ .|++++++.+.+.+.+.++++++.+...+.++|+...+. .+++++++. +||.+.++ ...
T Consensus        93 ~~~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~  169 (411)
T 1gwi_A           93 LTVDGAEHRRLRTLVAQ-ALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVAD-LMGIEEAR-LPR  169 (411)
T ss_dssp             GGCCHHHHHHHHHHHTT-TSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHH-HHTCCGGG-HHH
T ss_pred             ccCCcHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHH-HhCCCHHH-HHH
Confidence            77899999999999999 999999999999999999999999972334899998886 599999996 69987643 223


Q ss_pred             HHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHH
Q 011210          212 VEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDI  291 (491)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i  291 (491)
                      +...+..+...    .      ....+..++...+.+++.+.|++++++.      .+|+++.++++.+ ++..++++++
T Consensus       170 ~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~-~~~~l~~~~i  232 (411)
T 1gwi_A          170 LKVLFEKFFST----Q------TPPEEVVATLTELASIMTDTVAAKRAAP------GDDLTSALIQASE-NGDHLTDAEI  232 (411)
T ss_dssp             HHHHHHHHHCT----T------SCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB-TTBCCCHHHH
T ss_pred             HHHHHHHHhcc----C------CChHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhcc-cCCCCCHHHH
Confidence            33333333221    0      1134566778889999999998887642      4689999998754 3446999999


Q ss_pred             HHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC
Q 011210          292 IDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP  371 (491)
Q Consensus       292 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  371 (491)
                      .+++..+++||+|||+++++|++++|++||++|+|+++|+                      +||+|||+|+||++|+++
T Consensus       233 ~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~----------------------~~l~a~i~E~lRl~p~~~  290 (411)
T 1gwi_A          233 VSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE----------------------AEWSAVVEETLRFSTPTS  290 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS----------------------SCHHHHHHHHHHHSCSBC
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh----------------------HHHHHHHHHHHHhCCccc
Confidence            9999999999999999999999999999999999999872                      258999999999999998


Q ss_pred             C-cceeecccceeCCeEeCCCCEEEEcccccccCCCCC-CCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHH
Q 011210          372 S-SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENY-PDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEI  449 (491)
Q Consensus       372 ~-~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~  449 (491)
                      . ++|.+.+|++++|+.||||+.|+++.+++||||++| +||++|+||||.     ...++|||.|+|.|+|++||++|+
T Consensus       291 ~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~-----~~~~lpFG~G~r~C~G~~lA~~e~  365 (411)
T 1gwi_A          291 HVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTS-----GNRHISFGHGPHVCPGAALSRMEA  365 (411)
T ss_dssp             CEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCC-----SSCCCTTCCSTTCCTTHHHHHHHH
T ss_pred             CCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCC-----CCCcccCCCCcccCCCHHHHHHHH
Confidence            4 899999999999999999999999999999999999 999999999994     357999999999999999999999


Q ss_pred             HHHHHHHHhcC-eEeccCCCCCcccc--ccCCCCCCCeEEEeccC
Q 011210          450 SIFIHYFLLNY-KLELQNPECPAEYL--PVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       450 ~~~l~~ll~~f-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  491 (491)
                      +++++.|+++| ++++..++.++.+.  ...++..+++|++++|+
T Consensus       366 ~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          366 GVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             HHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred             HHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence            99999999999 79987543334333  46789999999999885


No 58 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=1.2e-60  Score=462.81  Aligned_cols=385  Identities=21%  Similarity=0.256  Sum_probs=311.1

Q ss_pred             cHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc-ccccc---------c
Q 011210           58 MLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT-STNKL---------T  127 (491)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~-~~~~~---------~  127 (491)
                      ..++...-...+++.++.++ ++|||  |+++.+|   +++|++|+.++++++++..+++.... .....         .
T Consensus        19 ~~~~~~~~~~~~p~~~~~~l-r~~gp--v~~~~~g---~~vv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (418)
T 3r9b_A           19 LLQLLDPATRADPYPIYDRI-RRGGP--LALPEAN---LAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQ   92 (418)
T ss_dssp             HHHHHSGGGTTCCHHHHHHH-HHHCC--EEEGGGT---EEEECSHHHHHHHHHCTTEECCGGGCHHHHHHHC--------
T ss_pred             cCCCCChhhccCchHHHHHH-HhcCC--EEECCCC---eEEEecHHHHHHHHcCcccccCcccccccccccccccccccc
Confidence            34443333346899999988 68899  9998765   99999999999999886533322211 11111         1


Q ss_pred             cccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCc
Q 011210          128 FRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSD  206 (491)
Q Consensus       128 g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~  206 (491)
                      +..+++..+|+.|+++||++++ .|++++++.+.+.+.+.++++++ +.+++ ++|+...+ ..++.++++. +||.+.+
T Consensus        93 ~~~~l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~-l~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~~  168 (418)
T 3r9b_A           93 GPASFLFLDPPDHTRLRGLVSK-AFAPRVIKRLEPEITALVDQLLD-AVDGP-EFNLIDNLAYPLPVAVICR-LLGVPIE  168 (418)
T ss_dssp             -CCCGGGCCTTHHHHHHHHHHG-GGSHHHHGGGHHHHHHHHHHHHH-TCCSS-EEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             cccchhhcCCchHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHh-hhccC-CeehHHHHhCcCCHHHHHH-HcCCCHH
Confidence            2356778899999999999999 99999999999999999999999 87666 89987665 5899999999 8999865


Q ss_pred             hhhhhHHHHHHHHHhcccCCCC--CCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCC
Q 011210          207 SVIGSVEKHYIDYAHGLISPFP--INLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGT  284 (491)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  284 (491)
                      +. ..+......+...+.. ..  ..++.....+..++.+.+.+++.+.+++++++.      .+|+++.+++.. +++.
T Consensus       169 ~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------~~d~l~~ll~~~-~~~~  239 (418)
T 3r9b_A          169 DE-PKFSRASALLAAALDP-FLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTP------GEDLMSGLVAVE-ESGD  239 (418)
T ss_dssp             GH-HHHHHHHHHHHHTTSC-HHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSC------CSSHHHHHHHHH-HHSS
T ss_pred             HH-HHHHHHHHHHHhhcCc-cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CccHHHHHHHhh-hccC
Confidence            42 2333333332221111 11  122444566778888899999999998877542      579999999874 3445


Q ss_pred             CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhc
Q 011210          285 KLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETL  364 (491)
Q Consensus       285 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  364 (491)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++                      |++|||+|+|
T Consensus       240 ~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~l  297 (418)
T 3r9b_A          240 QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS----------------------RASAVIEETM  297 (418)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG----------------------GHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH----------------------hHHHHHHHHH
Confidence            799999999999999999999999999999999999999999999953                      6899999999


Q ss_pred             ccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHH
Q 011210          365 RMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADL  444 (491)
Q Consensus       365 Rl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~l  444 (491)
                      |++|+++.+.|.+++|++++|+.||||+.|+++.+++||||++|+||++|+|||      ....++|||.|+|.|+|++|
T Consensus       298 Rl~p~~~~~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R------~~~~~~~FG~G~r~C~G~~l  371 (418)
T 3r9b_A          298 RYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR------AQIRHLGFGKGAHFCLGAPL  371 (418)
T ss_dssp             HHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGCCTTHHH
T ss_pred             HhCCccccceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCC------CCCCCcCCCCcCccCccHHH
Confidence            999999988899999999999999999999999999999999999999999999      45679999999999999999


Q ss_pred             HHHHHHHHHHHHHhcC-eEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          445 AKLEISIFIHYFLLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       445 a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      |++|++++++.|+++| ++++.++ ..+......++..++||++++|
T Consensus       372 A~~e~~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          372 ARLEATVALPALAARFPEARLSGE-PEYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEECSC-CEECSCSSBCCEEECEEEC---
T ss_pred             HHHHHHHHHHHHHHhCccceeCCC-CccccCCcccCcceeEEEecCC
Confidence            9999999999999999 8998754 4444455789999999999887


No 59 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=1.4e-59  Score=450.89  Aligned_cols=362  Identities=19%  Similarity=0.265  Sum_probs=300.8

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCccccccccc--cccccccccc--eeeccc-----
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYPT--STNKLTFRGS--FITASK-----  137 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~--~~~~~~g~~~--l~~~~g-----  137 (491)
                      .+++.++.++ ++|||  |+++++ ++.++++|+||+.+++++.++. +.+....  .+....+..+  ++..+|     
T Consensus        26 ~~p~~~~~~l-~~yGp--v~~~~~~~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  101 (404)
T 2xbk_A           26 LKLSPLLRAL-QDRGP--IHRVRTPAGDEAWLVTRHAELKQLLHDER-IGRTHPDPPSAAQYVRSPFLDLLISDADAESG  101 (404)
T ss_dssp             TBCCHHHHHH-HHHCS--EEEEECTTSCEEEEECSHHHHHHHTTCTT-EESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred             cCccHHHHHH-HhhCC--EeeeccCCCceEEEEcCHHHHHHHHcCCC-CCCCccccccCCcccccccccceeeCCCCCCC
Confidence            3788999999 89999  999997 7889999999999999998864 4333221  1222222244  777889     


Q ss_pred             -hhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHH
Q 011210          138 -EGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKH  215 (491)
Q Consensus       138 -~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~  215 (491)
                       +.|+++||++.+ .|++++++.+.+.+.+.++++++.+...++++|+...+ ..++.++++. +||.+.++ ...+.+.
T Consensus       102 ~~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~~  178 (404)
T 2xbk_A          102 RRQHAETRRLLTP-LFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCE-VIGVPPQR-RAELTTL  178 (404)
T ss_dssp             HHHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG-HHHHHHH
T ss_pred             CchHHHHHHHhhh-hcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH-HHHHHHH
Confidence             999999999999 89999999999999999999999997655589999776 5699999997 79988643 2233333


Q ss_pred             HHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHH
Q 011210          216 YIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDML  295 (491)
Q Consensus       216 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~  295 (491)
                      +..    +.. ..  .+  .  +..++.+.+.+++.+.+++++++.      .+|+++.+ +    ++ .++++++.+++
T Consensus       179 ~~~----~~~-~~--~~--p--~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~l-~----~~-~ls~~ei~~~~  235 (404)
T 2xbk_A          179 LAG----IAK-LD--DR--E--GAVRAQDDLFGYVAGLVEHKRAEP------GPDIISRL-N----DG-ELTEDRVAHLA  235 (404)
T ss_dssp             HHH----HTB-SS--CH--H--HHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHH-H----SS-SCCHHHHHHHH
T ss_pred             HHH----HHh-cc--Cc--H--HHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHh-h----cC-CCCHHHHHHHH
Confidence            222    222 11  11  1  566777888999999998887642      46899988 2    23 69999999999


Q ss_pred             HHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC--Cc
Q 011210          296 ISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP--SS  373 (491)
Q Consensus       296 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~  373 (491)
                      ..+++||+|||+++++|++++|++||++|+|+++|++                      ||+|||+|+||++|+++  ++
T Consensus       236 ~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~~  293 (404)
T 2xbk_A          236 MGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD----------------------VMARAVEEVLRTARAGGSVLP  293 (404)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH----------------------HHHHHHHHHHHHSCSSCCBCS
T ss_pred             HHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------------HHHHHHHHHHHhCCCcccccc
Confidence            9999999999999999999999999999999999964                      68999999999999999  78


Q ss_pred             ceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHH
Q 011210          374 FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFI  453 (491)
Q Consensus       374 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l  453 (491)
                      +|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|+++++
T Consensus       294 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~lpFG~G~r~C~G~~lA~~e~~~~l  367 (404)
T 2xbk_A          294 PRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP------NPHLTFGHGIWHCIGAPLARLELRTMF  367 (404)
T ss_dssp             CEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS------CCCCTTEETTEECTTHHHHHHHHHHHH
T ss_pred             ceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC------CCCCCCCCCCcCCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999983      569999999999999999999999999


Q ss_pred             HHHHhcC-eEeccCCCCCccc--cccCCCCCCCeEEE
Q 011210          454 HYFLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKV  487 (491)
Q Consensus       454 ~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  487 (491)
                      +.|+++| ++++.+++.+..+  ....++..++||++
T Consensus       368 a~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          368 TKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             HHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             HHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            9999999 7998765333333  44678999999874


No 60 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=8.3e-60  Score=457.23  Aligned_cols=374  Identities=17%  Similarity=0.216  Sum_probs=310.5

Q ss_pred             CchHHHHHHHHHcCCcceEEeeeC-------CCcEEEEeChHhHhHHhcCCcccccccc----ccccccc-cccceeecc
Q 011210           69 EPQSFIYNLFERYGRKGIYRNHIF-------GSPCVIVVAPEACKQVFLDDENFKMGYP----TSTNKLT-FRGSFITAS  136 (491)
Q Consensus        69 ~~~~~~~~~~~~yG~~~v~~~~~~-------~~~~vvv~~~~~~~~i~~~~~~~~~~~~----~~~~~~~-g~~~l~~~~  136 (491)
                      +++.++.+|+ +|||  |++++++       +.++++|+||+.+++++.+++.|.+...    .....+. ...+++..+
T Consensus        45 ~p~~~~~~l~-~~Gp--v~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~d  121 (435)
T 2wm5_A           45 VRDGAFATLR-REAP--ISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLD  121 (435)
T ss_dssp             HHHHHHHHHH-HHCS--EEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred             ChhHHHHHHH-hcCC--eEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccCC
Confidence            6889999995 7999  9999986       6789999999999999998755554421    1111111 135677789


Q ss_pred             chhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcC--CCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHH
Q 011210          137 KEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASL--DTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVE  213 (491)
Q Consensus       137 g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~  213 (491)
                      |+.|+++|+++.+ .|++++++.+.+.+.+.++++++.+...  +.++|+..++ ..+++++++++ ||.+.++ .+.+.
T Consensus       122 g~~h~~~R~~l~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~  198 (435)
T 2wm5_A          122 DPRHQRLRSIVSR-AFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKAD-HQRIF  198 (435)
T ss_dssp             TTHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHH
T ss_pred             cHHHHHHHHHhHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH-HHHHH
Confidence            9999999999999 9999999999999999999999998532  2379999876 78999999999 9998754 23343


Q ss_pred             HHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHH
Q 011210          214 KHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIID  293 (491)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~  293 (491)
                      +....+....   .|.+.+  .+++..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+
T Consensus       199 ~~~~~~~~~~---~p~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~ls~~ei~~  266 (435)
T 2wm5_A          199 HWTNVILGFG---DPDLAT--DFDEFMQVSADIGAYATALAEDRRVNH------HDDLTSSLVEAEV-DGERLSSREIAS  266 (435)
T ss_dssp             HHHHHHHHTT---CTTSCC--CHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCCB-TTBCCCHHHHHH
T ss_pred             HHHHHHhccC---Ccchhh--hHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCHHHHHHhhhc-cCCCCCHHHHHH
Confidence            3333333221   233333  235677788889999999999887642      5799999998753 344699999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc
Q 011210          294 MLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS  373 (491)
Q Consensus       294 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  373 (491)
                      ++..+++||+|||+.+++|++++|++||++|+|+++|++                     +||+|||+|+||++|+++++
T Consensus       267 ~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~---------------------~~l~a~i~E~lRl~p~~~~~  325 (435)
T 2wm5_A          267 FFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD---------------------GLAPTAVEEIVRWASPVVYM  325 (435)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH---------------------HHHHHHHHHHHHHHCSBCCE
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH---------------------hHHHHHHHHHHhhcCcccCc
Confidence            999999999999999999999999999999999999975                     37999999999999999988


Q ss_pred             ceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccC-CCCCCccHHHHHHHHHHH
Q 011210          374 FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGG-GSRICPGADLAKLEISIF  452 (491)
Q Consensus       374 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~-G~r~C~G~~la~~~~~~~  452 (491)
                      +|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+|||+      +..++|||. |+|.|+|+.||++|++++
T Consensus       326 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~------~~~~lpFG~~G~r~C~G~~lA~~e~~~~  399 (435)
T 2wm5_A          326 RRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN------PNPHLGFGGGGAHFCLGANLARREIRVA  399 (435)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC------SCCCCTTCSSSTTCCTTHHHHHHHHHHH
T ss_pred             ceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999994      357999999 999999999999999999


Q ss_pred             HHHHHhcCe-EeccCCCCCccccccCCCCCCCeEEEe
Q 011210          453 IHYFLLNYK-LELQNPECPAEYLPVPRPSDQCLAKVV  488 (491)
Q Consensus       453 l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (491)
                      ++.|+++|+ +++.+ +..+...+..++..++||++.
T Consensus       400 la~ll~~f~~~~l~~-~~~~~~~~~~~~~~~lpv~~~  435 (435)
T 2wm5_A          400 FDELRRQMPDVVATE-EPARLLSQFIHGIKTLPVTWS  435 (435)
T ss_dssp             HHHHHHHCTTCEECS-CCEECCCSSBCCEEECEEECC
T ss_pred             HHHHHHhCCccEECC-CccccccccccCccceeEEeC
Confidence            999999997 99875 333444557788888888863


No 61 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=3e-60  Score=457.13  Aligned_cols=369  Identities=19%  Similarity=0.214  Sum_probs=307.8

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCC--CcEEEEeChHhHhHHhcCCccccccccccccc----cc-c-ccceeeccchh
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFG--SPCVIVVAPEACKQVFLDDENFKMGYPTSTNK----LT-F-RGSFITASKEG  139 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~--~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~~~----~~-g-~~~l~~~~g~~  139 (491)
                      ++++.++.++++ |||  |+++...|  .++++|++++.+++++++++.|.+........    .. + ..+++..+|+.
T Consensus        37 ~dp~~~~~~lr~-~gp--V~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~  113 (415)
T 3mgx_A           37 LERHARWRELAA-EDA--MVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ  113 (415)
T ss_dssp             TTHHHHHHHHHH-HTC--CEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred             CChhHHHHHHHh-cCC--EeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCccccCcHH
Confidence            589999998887 999  99997445  79999999999999998776565543322211    11 1 35677789999


Q ss_pred             HHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHH
Q 011210          140 QKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYID  218 (491)
Q Consensus       140 ~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~  218 (491)
                      |+++||++.+ .|+++.++.+.+.+.+.++++++.+...+ ++|+..++ ..+++++++. +||.+.++ ...+.+....
T Consensus       114 h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~dl~~~~~~~~~~~vi~~-l~G~~~~~-~~~~~~~~~~  189 (415)
T 3mgx_A          114 HRKLRKLVGP-LLSRAAARKLAERVRIEVGDVLGRVLDGE-VCDAATAIGPRIPAAVVCE-ILGVPAED-EDMLIDLTNH  189 (415)
T ss_dssp             HHHHHHHHGG-GSSHHHHHHSHHHHHHHHHHHTTTSSSSS-CEESTTTTTTHHHHHHHHH-HHTCCGGG-HHHHHHHHHH
T ss_pred             HHHHHHHhHh-hhCHHHHHHHHHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHH
Confidence            9999999999 99999999999999999999999997766 89999888 6799999998 58987544 2333333333


Q ss_pred             HHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHH
Q 011210          219 YAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISF  298 (491)
Q Consensus       219 ~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~  298 (491)
                      +....   .+...+.    ...++...+.+++.+.+++++++.      .+|+++.+++..     .++++++..++..+
T Consensus       190 ~~~~~---~~~~~~~----~~~~~~~~l~~~~~~~i~~rr~~~------~~dll~~ll~~~-----~ls~~el~~~~~~l  251 (415)
T 3mgx_A          190 AFGGE---DELFDGM----TPRQAHTEILVYFDELITARRKEP------GDDLVSTLVTDD-----DLTIDDVLLNCDNV  251 (415)
T ss_dssp             HTSCC---C----CC----CHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHCT-----TSCHHHHHHHHHHH
T ss_pred             HHccc---CcccchH----HHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhCC-----CCCHHHHHHHHHHH
Confidence            32211   1222222    234677888999999999887652      579999999764     58999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeec
Q 011210          299 LSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAE  378 (491)
Q Consensus       299 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~  378 (491)
                      ++||+|||+++++|++++|++||++|+|+++|+                      +|+++||+|+||++|++++++|.++
T Consensus       252 l~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~LRl~pp~~~~~R~~~  309 (415)
T 3mgx_A          252 LIGGNETTRHAITGAVHALATVPGLLTALRDGS----------------------ADVDTVVEEVLRWTSPAMHVLRVTT  309 (415)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS----------------------SCHHHHHHHHHHHHCCBCEEEEEES
T ss_pred             HHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh----------------------HhHHHHHHHHHHhcCcccccceecC
Confidence            999999999999999999999999999999984                      6899999999999999998899999


Q ss_pred             ccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHh
Q 011210          379 ADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLL  458 (491)
Q Consensus       379 ~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~  458 (491)
                      +|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|+.||++|++++++.|++
T Consensus       310 ~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~  383 (415)
T 3mgx_A          310 ADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRK------PNRHITFGHGMHHCLGSALARIELSVVLRVLAE  383 (415)
T ss_dssp             SCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCC------SCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHH
T ss_pred             CCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCC------CCCCCCCCCCCccCcCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999997      457999999999999999999999999999999


Q ss_pred             cC-eEeccCCCCCccccccCCCCCCCeEEEecc
Q 011210          459 NY-KLELQNPECPAEYLPVPRPSDQCLAKVVGF  490 (491)
Q Consensus       459 ~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (491)
                      +| ++++..+ ..+......+....+||++++|
T Consensus       384 ~f~~~~l~~~-~~~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          384 RVSRVDLERE-PAWLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HEEEEEECSC-CEECSCSSBCCEEECEEEEEEC
T ss_pred             hCCCCccCCC-cccccCCcccCceeeeEEEecC
Confidence            99 8998743 3344455778889999999986


No 62 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=2e-59  Score=453.22  Aligned_cols=365  Identities=17%  Similarity=0.235  Sum_probs=303.3

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeC-CCcEEEEeChHhHhHHhcCCccccccc-----ccccccc----ccccceeeccc
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIF-GSPCVIVVAPEACKQVFLDDENFKMGY-----PTSTNKL----TFRGSFITASK  137 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~-~~~~vvv~~~~~~~~i~~~~~~~~~~~-----~~~~~~~----~g~~~l~~~~g  137 (491)
                      .+++.++.+|+++ ||  |++++++ |.++++|++|+.+++++.++ .|.+..     +......    .+..+++..+|
T Consensus        29 ~dp~~~~~~l~~~-Gp--v~~~~~~~g~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  104 (417)
T 3tyw_A           29 FAAPAEYAALRTD-DP--VARVTLPTRREAWVVTRYDDVRELLSDP-RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA  104 (417)
T ss_dssp             TSCCTHHHHHHHT-CT--EEEEECTTSCEEEEECCHHHHHHHHHCT-TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred             cCchHHHHHHHhh-CC--eeeeecCCCCCeEEEcCHHHHHHHHcCC-CcccCCccccccccccccccccccccchhhcCC
Confidence            5899999999998 99  9999987 58999999999999999987 444421     1111111    12356777899


Q ss_pred             hhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHH
Q 011210          138 EGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHY  216 (491)
Q Consensus       138 ~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  216 (491)
                      +.|+++||++.+ .|++++++.+.+.+.+.++++++.+...++++|+...+ ..++.++++.+ ||.+.++. ..+....
T Consensus       105 ~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~~~  181 (417)
T 3tyw_A          105 PEHTRYRRMLLP-AFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICEL-LGIPRHDL-EFFRDVT  181 (417)
T ss_dssp             HHHHHHHHHHGG-GGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT-THHHHHH
T ss_pred             cHHHHHHHHHHh-hhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH-HHHHHHH
Confidence            999999999999 99999999999999999999999987656579999988 57889999987 89986542 2232222


Q ss_pred             HHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHH
Q 011210          217 IDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLI  296 (491)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~  296 (491)
                      ..+    ....+      ...+..++...+.+++.+.+++++++.      .+|+++.+++..+++ ..++++++.+++.
T Consensus       182 ~~~----~~~~~------~~~~~~~~~~~l~~~~~~~i~~r~~~~------~~d~l~~ll~~~~~~-~~ls~~el~~~~~  244 (417)
T 3tyw_A          182 RIS----GSRNS------TAEQVSEALGGLFGLLGGLVAERREEP------RDDLISKLVTDHLVP-GNVTTEQLLSTLG  244 (417)
T ss_dssp             HHH----HSSSS------CTTHHHHHHHHHHHHHHHHHHHHHSSC------CSSHHHHHHHHTTTT-TSSCHHHHHHHHH
T ss_pred             HHH----hcccC------CHHHHHHHHHHHHHHHHHHHHHHhhCC------CCCHHHHHHHhcccC-CCCCHHHHHHHHH
Confidence            222    22111      134567788889999999999887642      579999999876543 3699999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCC-cce
Q 011210          297 SFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPS-SFR  375 (491)
Q Consensus       297 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r  375 (491)
                      .+++||+|||+++++|++++|++||++|+|+++|++                      ||+|||+|+||++|+++. ++|
T Consensus       245 ~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~~R  302 (417)
T 3tyw_A          245 ITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD----------------------LMPAAVDELLRVLSVADSIPLR  302 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG----------------------GHHHHHHHHHHHHCSCTTCCEE
T ss_pred             HHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH----------------------HHHHHHHHHHHhccccccCcee
Confidence            999999999999999999999999999999999953                      689999999999999996 789


Q ss_pred             eecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHH
Q 011210          376 EAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHY  455 (491)
Q Consensus       376 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~  455 (491)
                      .+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||++|++++++.
T Consensus       303 ~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~  376 (417)
T 3tyw_A          303 VAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRT------DNHHVAFGYGVHQCVGQHLARLELEVALET  376 (417)
T ss_dssp             EESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS------CCCCCTTCCSTTCCSCHHHHHHHHHHHHHH
T ss_pred             EeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCC------CCCCCCCCCCCccCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998      356999999999999999999999999999


Q ss_pred             HHhcC-eEeccCCCCCccccc--cCCCCCCCe
Q 011210          456 FLLNY-KLELQNPECPAEYLP--VPRPSDQCL  484 (491)
Q Consensus       456 ll~~f-~~~~~~~~~~~~~~~--~~~~~~~~~  484 (491)
                      |+++| ++++..++.+..+.+  ..+....++
T Consensus       377 ll~~fp~~~l~~~~~~~~~~~~~~~~g~~~l~  408 (417)
T 3tyw_A          377 LLRRVPTLRLAGERDQVVVKHDSATFGLEELM  408 (417)
T ss_dssp             HHHHCTTCEECSCTTCCEECSSCSSCCEEECE
T ss_pred             HHHhCCcccccCCCccceeccCccccChhhcc
Confidence            99999 999986655555543  344444444


No 63 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.9e-59  Score=451.91  Aligned_cols=368  Identities=18%  Similarity=0.251  Sum_probs=304.0

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccccccc--cc-----ccccc----cccc-eee
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYP--TS-----TNKLT----FRGS-FIT  134 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~--~~-----~~~~~----g~~~-l~~  134 (491)
                      .+++.++.+|+ +|||  |+++++ ++.+++++++|+.+++++.++ .|.++..  ..     ...+.    +..+ ++.
T Consensus        22 ~~p~~~~~~l~-~~Gp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   97 (413)
T 2z36_A           22 FAPPAAYERLR-ERAP--INKVRLTSGGQAWWVSGHEEARAVLADG-RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG   97 (413)
T ss_dssp             TBCCHHHHHHH-HHCS--EEEEEETTSCEEEEECSHHHHHHHHHCT-TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred             cCchHHHHHHH-HcCC--eeEeecCCCceEEEEecHHHHHHHHcCC-CcccCccccCccccccccccccccccccccccc
Confidence            47899999997 7899  999997 788999999999999999875 3443321  11     11222    2355 777


Q ss_pred             ccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcC-CCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhH
Q 011210          135 ASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASL-DTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSV  212 (491)
Q Consensus       135 ~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~  212 (491)
                      .+|+.|+++|+++.+ .|++++++.+.+.+.+.++++++.+... ++++|+...+. .++.++++.+ ||.+.++. .  
T Consensus        98 ~~g~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-~--  172 (413)
T 2z36_A           98 MDGAEHSAARRPVIG-EFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGVPYTDH-D--  172 (413)
T ss_dssp             CCHHHHHHHHHHHHG-GGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGH-H--
T ss_pred             cCchHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCCCHHHH-H--
Confidence            899999999999999 8999999999999999999999998633 45899987665 6899999984 99876532 2  


Q ss_pred             HHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHH
Q 011210          213 EKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDII  292 (491)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~  292 (491)
                        .+......+....   .+    .+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.
T Consensus       173 --~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~ls~~ei~  236 (413)
T 2z36_A          173 --FFQSRTTMMVSRT---SM----EDRRRAFAELRAYIDDLITRKESEP------GDDLFSRQIARQR-QEGTLDHAGLV  236 (413)
T ss_dssp             --HHHHHHHHTTCSS---CH----HHHHHHHHHHHHHHHHHHHHHHSSC------CSSHHHHHHHHHH-HHSCCCHHHHH
T ss_pred             --HHHHHHHHHhccc---Cc----HHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhc-CCCCCCHHHHH
Confidence              2233333322211   11    4566778888999999998887642      4689999998753 34469999999


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-
Q 011210          293 DMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-  371 (491)
Q Consensus       293 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-  371 (491)
                      +++..+++||+|||+++++|++++|++||++|+|+++|++                      |++|||+|+||++|+++ 
T Consensus       237 ~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~  294 (413)
T 2z36_A          237 SLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG----------------------RTPMAVEELLRYFTIADG  294 (413)
T ss_dssp             HHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG----------------------GHHHHHHHHHHHHCTTTT
T ss_pred             HHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH----------------------HHHHHHHHHHHhCCCccc
Confidence            9999999999999999999999999999999999999842                      68999999999999999 


Q ss_pred             CcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHH
Q 011210          372 SSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISI  451 (491)
Q Consensus       372 ~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~  451 (491)
                      +++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|+++
T Consensus       295 ~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~  368 (413)
T 2z36_A          295 VTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA------RHHLAFGFGPHQCLGQNLARMELQI  368 (413)
T ss_dssp             CEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC------CCCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred             ceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC------CCCCCCCCCCccCccHHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999983      4589999999999999999999999


Q ss_pred             HHHHHHhcC-eEeccCCCCCccc--cccCCCCCCCeEEEe
Q 011210          452 FIHYFLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKVV  488 (491)
Q Consensus       452 ~l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  488 (491)
                      +++.|+++| ++++.+++.++.+  ....+....+||++.
T Consensus       369 ~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          369 VFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             HHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             HHHHHHHhCCCccccCCcccceecccccccCcceeeEEee
Confidence            999999999 5898765333333  446788888888764


No 64 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=2.9e-60  Score=456.62  Aligned_cols=368  Identities=15%  Similarity=0.178  Sum_probs=304.3

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccccccccc--cccceeeccchhHHHHHH
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTSTNKLT--FRGSFITASKEGQKRIRK  145 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~~~~~--g~~~l~~~~g~~~~~~Rr  145 (491)
                      .+++.++.+|+++ ||  |+++..++ +.++|++|+.+++++++++.|.+..........  +..+++..+|+.|+++||
T Consensus        24 ~~p~~~~~~l~~~-Gp--v~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~   99 (396)
T 3oft_A           24 QDYFAAWKTLLDG-PG--LVWSTANG-GHWIAARGDVVRELWGDAERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRT   99 (396)
T ss_dssp             TCHHHHHHGGGGS-CS--EEEECSTT-SEEEECSHHHHHHHHHCTTTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHH
T ss_pred             cChHHHHHHHHhc-CC--eeeecCCC-CEEEEcCHHHHHHHHcCcccccCCcccCCCccccccccCccccCCcHHHHHHH
Confidence            5899999999999 99  99998874 589999999999999887666554322111111  224566789999999999


Q ss_pred             hhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHH-HHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhccc
Q 011210          146 LATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMR-KATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLI  224 (491)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~  224 (491)
                      ++.+ .|++++++.+.+.+.+.++++++.+...+ .+|+...+. .++.++++. +||.+.++ ...+......+...  
T Consensus       100 ~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~-~~d~~~~~~~~~~~~v~~~-~~G~~~~~-~~~~~~~~~~~~~~--  173 (396)
T 3oft_A          100 PVMK-GLASRFVVALEPKVQAVARKLMESLRPRG-SCDFVSDFAEILPLNIFLT-LIDVPLED-RPRLRQLGVQLTRP--  173 (396)
T ss_dssp             HHHH-HTCHHHHHHHHHHHHHHHHHHHHHHGGGS-EEEHHHHTTTTHHHHHHHH-HTTCCGGG-HHHHHHHHHHHHSC--
T ss_pred             Hhhh-hhCHHHHHHHHHHHHHHHHHHHHHhhhcC-CccHHHHHHHHHHHHHHHH-HcCCCHHH-HHHHHHHHHHHhCC--
Confidence            9999 99999999999999999999999997666 799987774 456666555 68987543 23333333333211  


Q ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccc
Q 011210          225 SPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHE  304 (491)
Q Consensus       225 ~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~  304 (491)
                        .       ...+..++.+.+.+++.+.+++++++.      .+|+++.+++..+ ++..++++++.+++..+++||+|
T Consensus       174 --~-------~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~d~l~~ll~~~~-~~~~l~~~el~~~~~~l~~AG~d  237 (396)
T 3oft_A          174 --D-------GSMTVEQLKQAADDYLWPFIEKRMAQP------GDDLFSRILSEPV-GGRPWTVDEARRMCRNLLFGGLD  237 (396)
T ss_dssp             --C-------SSCCHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHTSCB-TTBCCCHHHHHHHHHHHHHHHHH
T ss_pred             --C-------CHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhH
Confidence              1       123467778889999999999888762      6799999998754 44569999999999999999999


Q ss_pred             cHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeC
Q 011210          305 SSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQ  384 (491)
Q Consensus       305 tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~  384 (491)
                      ||+++++|++++|++||++|+|+++|++                      |++|||+|+||++|++ .++|.+.+|++++
T Consensus       238 Tta~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~~~  294 (396)
T 3oft_A          238 TVAAMIGMVALHLARHPEDQRLLRERPD----------------------LIPAAADELMRRYPTV-AVSRNAVADVDAD  294 (396)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------------GHHHHHHHHHHHCCCB-EEEEEESSCEEET
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHhCHH----------------------hHHHHHHHHHHhcCcc-cCceecCCCEEEC
Confidence            9999999999999999999999999964                      6899999999999999 9999999999999


Q ss_pred             CeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEe
Q 011210          385 GYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-KLE  463 (491)
Q Consensus       385 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~  463 (491)
                      |+.||||+.|+++.+++||||++|+||++|+||||+.    +..++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus       295 g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~----~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~  370 (396)
T 3oft_A          295 GVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA----PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFA  370 (396)
T ss_dssp             TEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC----GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEE
T ss_pred             CEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC----CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCce
Confidence            9999999999999999999999999999999999964    46799999999999999999999999999999999 999


Q ss_pred             ccCCCCCccccccCCCCCCCeEEEe
Q 011210          464 LQNPECPAEYLPVPRPSDQCLAKVV  488 (491)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~~~  488 (491)
                      +.+++.........+....+||++.
T Consensus       371 l~~~~~~~~~~~~~~~~~~lpv~~~  395 (396)
T 3oft_A          371 LAPDKAVTMKGGNVGACTALPLVWR  395 (396)
T ss_dssp             ECSSSCCEEECSSBCEEEECEEEEC
T ss_pred             ECCCCCceeccccccCcccceEEeC
Confidence            9855433333345666677888875


No 65 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=4.1e-60  Score=461.77  Aligned_cols=378  Identities=17%  Similarity=0.219  Sum_probs=306.6

Q ss_pred             chHHHHHHHHHcCCcceE--Eee-eCCCcEEEEeChHhHhHHhcCCccccccccccc-cc---------cc-----cccc
Q 011210           70 PQSFIYNLFERYGRKGIY--RNH-IFGSPCVIVVAPEACKQVFLDDENFKMGYPTST-NK---------LT-----FRGS  131 (491)
Q Consensus        70 ~~~~~~~~~~~yG~~~v~--~~~-~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~-~~---------~~-----g~~~  131 (491)
                      ++.++.++ ++|||  |+  ++. +++.++++|+++++++++++++..|.++..... ..         ..     ...+
T Consensus        47 p~~~~~~l-r~~gP--V~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~  123 (450)
T 3tkt_A           47 LLDRFDAL-RAEAP--VAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVES  123 (450)
T ss_dssp             HHHHHHHH-HHHCS--EEEECCTTCSSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCC
T ss_pred             chHHHHHH-HhcCC--eecccccCCCCCCEEEEecHHHHHHHHhCcccccCCCccccccccccccccccccccccccccC
Confidence            88899888 78999  99  988 677899999999999999988866665432211 10         00     1136


Q ss_pred             eeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhh
Q 011210          132 FITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIG  210 (491)
Q Consensus       132 l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~  210 (491)
                      ++..+|+.|+++||++++ .|++++++.+.+.+.+.++++++.+...++++|+...+ ..+++++++++ ||.+.++ ..
T Consensus       124 l~~~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~-~~  200 (450)
T 3tkt_A          124 LVQMDAPKHPKLRRLTQD-WFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQI-LGVPPED-EP  200 (450)
T ss_dssp             GGGCCTTHHHHHHHHHHT-TTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG-HH
T ss_pred             cccCCCHHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHH-cCCChhH-HH
Confidence            777899999999999999 99999999999999999999999997634489999888 69999999986 9987543 22


Q ss_pred             hHHHHHHHHHhcccC-C--CCCCCC--CcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCC
Q 011210          211 SVEKHYIDYAHGLIS-P--FPINLP--GFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTK  285 (491)
Q Consensus       211 ~~~~~~~~~~~~~~~-~--~~~~~p--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~  285 (491)
                      .+.+....+...... .  .+.+..  .....+..++...+.+++.+.+++++++.      .+|+++.+++..+ ++..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~~-~~~~  273 (450)
T 3tkt_A          201 KMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP------TDDVATVIANAVV-DGEP  273 (450)
T ss_dssp             HHHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHTCEE-TTEE
T ss_pred             HHHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHhccc-cCCC
Confidence            233222222211110 0  000110  11234566777888999999999887652      5689999998754 4446


Q ss_pred             CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcc
Q 011210          286 LDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLR  365 (491)
Q Consensus       286 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  365 (491)
                      ++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+                      +|+++||+|+||
T Consensus       274 ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~LR  331 (450)
T 3tkt_A          274 MSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR----------------------NLLPGIVEEAIR  331 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------------GGHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH----------------------HHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999995                      378999999999


Q ss_pred             cCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHH
Q 011210          366 MTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLA  445 (491)
Q Consensus       366 l~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la  445 (491)
                      ++|+++.++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+||||      ...++|||.|+|.|+|++||
T Consensus       332 l~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~------~~~~l~FG~G~r~C~G~~lA  405 (450)
T 3tkt_A          332 WTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRP------ANRHLAFGAGSHQCLGLHLA  405 (450)
T ss_dssp             HHCSBCEEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC------TTCSSTTCCSTTCCTTHHHH
T ss_pred             hCCCccCcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCC------CCCCCCCCCcCccCccHHHH
Confidence            999999889999999999999999999999999999999999999999999994      45799999999999999999


Q ss_pred             HHHHHHHHHHHHhcCe-EeccCCCCCccccccCCCCCCCeEEEec
Q 011210          446 KLEISIFIHYFLLNYK-LELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       446 ~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      ++|++++++.|+++|+ +++. ++.++......+....+||++++
T Consensus       406 ~~e~~~~l~~ll~~f~~~~l~-~~~~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          406 RLEMRVLLDVLLDRVDSLELA-GEPKRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             HHHHHHHHHHHHHHEEEEEES-SCCEECCCSSBCCEEECEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCceeC-CCcccccCcccCCcccceEEEec
Confidence            9999999999999998 6765 44444444567778889999874


No 66 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=9.7e-59  Score=448.48  Aligned_cols=376  Identities=17%  Similarity=0.203  Sum_probs=307.3

Q ss_pred             cCCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccccccc---cccc--------ccccccceee
Q 011210           67 SSEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFKMGYP---TSTN--------KLTFRGSFIT  134 (491)
Q Consensus        67 ~~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~~~~~---~~~~--------~~~g~~~l~~  134 (491)
                      .++++.++.+++++ ||  |+++.. ++.++++|++++.+++++++++.|++...   ....        ...+..+++.
T Consensus        37 ~~~p~~~~~~lr~~-gp--v~~~~~~~~~~~~vvt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  113 (426)
T 3rwl_A           37 NDSVGEYFKRLRKD-DP--VHYCADSAFGPYWSITKYNDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIA  113 (426)
T ss_dssp             TTCHHHHHHHHHHH-CS--EEEESCCTTCSEEEECSHHHHHHHHHCTTTEECCGGGTCSSSSCCC-------CCCCCGGG
T ss_pred             cCCccHHHHHHHhc-CC--eeeccCCCCCCEEEEcCHHHHHHHHcCCcccccccccCCCCcccccccccccccccCcccc
Confidence            35799999999876 99  999987 45689999999999999999876654331   1111        1123356777


Q ss_pred             ccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHH
Q 011210          135 ASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVE  213 (491)
Q Consensus       135 ~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~  213 (491)
                      .+|+.|+++|+++.+ .|+++.++.+.+.+.+.++++++.+..++ ++|+...+ ..++.++++. +||.+.++. ..+.
T Consensus       114 ~dg~~h~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l~~~~-~~dl~~~~~~~~~~~vi~~-l~G~~~~~~-~~~~  189 (426)
T 3rwl_A          114 MDRPRHDEQRKAVSP-IVAPANLAALEGTIRERVSKTLDGLPVGE-EFDWVDRVSIEITTQMLAT-LFDFPFEER-RKLT  189 (426)
T ss_dssp             CCTTHHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHTSCSSS-CEEHHHHTHHHHHHHHHHH-HHTCCGGGT-HHHH
T ss_pred             cCchHHHHHHHHhhh-hhCHHHHHHHHHHHHHHHHHHHHHhhcCC-CcchHHHHHHHHHHHHHHH-HcCCCHHHH-HHHH
Confidence            899999999999999 99999999999999999999999997655 89988887 5677777765 899875442 2222


Q ss_pred             HHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHH
Q 011210          214 KHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIID  293 (491)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~  293 (491)
                          .....+.. ++............++...+.+++.++++++++..     +.+|+++.+++..+++  .++++++.+
T Consensus       190 ----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~dll~~ll~~~~~~--~ls~~el~~  257 (426)
T 3rwl_A          190 ----RWSDVTTA-APGGGVVESWDQRKTELLECAAYFQVLWNERVNKD-----PGNDLISMLAHSPATR--NMTPEEYLG  257 (426)
T ss_dssp             ----HHHHHHTC-CTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTSC-----CCSSHHHHHHHCGGGG--GCCHHHHHH
T ss_pred             ----HHHHHHHh-ccCccccccHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCHHHHHHhcccCC--CCCHHHHHH
Confidence                22222222 11111112345566777889999999998874321     2679999999876443  489999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCc
Q 011210          294 MLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSS  373 (491)
Q Consensus       294 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  373 (491)
                      ++..+++||+|||+++++|++++|++||++|+++++|+                      +|+++||+|+||++|+++.+
T Consensus       258 ~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~----------------------~~l~a~i~E~LRl~p~~~~~  315 (426)
T 3rwl_A          258 NVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP----------------------ALVETMVPEIIRWQTPLAHM  315 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------------GGHHHHHHHHHHHHCSBCCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh----------------------HhHHHHHHHHHHhcCccccC
Confidence            99999999999999999999999999999999999984                      37999999999999999989


Q ss_pred             ceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHH
Q 011210          374 FREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFI  453 (491)
Q Consensus       374 ~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l  453 (491)
                      +|.+++|++++|+.||||+.|+++.+++||||++|+||++|+||||     .+..++|||.|+|.|+|++||++|+++++
T Consensus       316 ~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~-----~~~~~l~FG~G~r~C~G~~lA~~e~~~~l  390 (426)
T 3rwl_A          316 RRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRP-----RPRQHLSFGFGIHRCVGNRLAEMQLRILW  390 (426)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----CTTCCSTTCCSTTSCSSHHHHHHHHHHHH
T ss_pred             ceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCC-----CCCCccCCCCCCcCCccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999     34679999999999999999999999999


Q ss_pred             HHHHhcC-eEeccCCCCCccccccCCCCCCCeEEEec
Q 011210          454 HYFLLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       454 ~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      +.|+++| ++++.++ .........++...+||++++
T Consensus       391 ~~ll~~f~~~~l~~~-~~~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          391 EEILTRFSRIEVMAE-PERVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             HHHHTTCSEEEECSC-CEECCCSSBCCEEECEEEEEC
T ss_pred             HHHHHhCccCeeCCC-CcccccccccCcceeeEEEeC
Confidence            9999999 9998744 334445577888899999875


No 67 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=2.9e-59  Score=449.27  Aligned_cols=361  Identities=17%  Similarity=0.275  Sum_probs=291.3

Q ss_pred             HHHHHHHHcCCcceEEeeeC-CC---cEEEEeChHhHhHHh-cCCcccccccc-------c---cccccccccceeeccc
Q 011210           73 FIYNLFERYGRKGIYRNHIF-GS---PCVIVVAPEACKQVF-LDDENFKMGYP-------T---STNKLTFRGSFITASK  137 (491)
Q Consensus        73 ~~~~~~~~yG~~~v~~~~~~-~~---~~vvv~~~~~~~~i~-~~~~~~~~~~~-------~---~~~~~~g~~~l~~~~g  137 (491)
                      .+.+|+++ ||  |++++++ |.   ++++|+||+.+++++ +++ .+.++..       .   ......+..+++..+|
T Consensus        18 ~~~~l~~~-Gp--v~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   93 (398)
T 1lfk_A           18 PADELLAA-GA--LTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDP   93 (398)
T ss_dssp             ECHHHHTS-CS--EEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGGCCT
T ss_pred             hhHHHHhc-CC--ccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccccCC
Confidence            34456666 99  9999875 55   899999999999999 554 3433221       0   1111222356777899


Q ss_pred             hhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHH-HHHHHHHHHhcCCCCchhhhhHHHHH
Q 011210          138 EGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRK-ATFKIIANIFLGSSSDSVIGSVEKHY  216 (491)
Q Consensus       138 ~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~-~~~~~~~~~~fG~~~~~~~~~~~~~~  216 (491)
                      +.|+++||++.+ .|++++++.+.+.+.+.++++++.+...++++|+...+.. ++.++++. +||.+.++. .    .+
T Consensus        94 ~~~~~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~-~----~~  166 (398)
T 1lfk_A           94 PEHTRLRRKLTP-GFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCE-LVGVPRDDR-D----MF  166 (398)
T ss_dssp             THHHHHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGH-H----HH
T ss_pred             HHHHHHHHHHHh-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH-H----HH
Confidence            999999999999 8999999999999999999999998644448999999987 88888887 589986532 2    22


Q ss_pred             HHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHH
Q 011210          217 IDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLI  296 (491)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~  296 (491)
                      ......+.. .    + ....+..++.+.+.+++.+.|++++++.      .+|+++.+++.. +  ..++++++.+++.
T Consensus       167 ~~~~~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~~-~--~~l~~~el~~~~~  231 (398)
T 1lfk_A          167 MKLCHGHLD-A----S-LSQKRRAALGDKFSRYLLAMIARERKEP------GEGMIGAVVAEY-G--DDATDEELRGFCV  231 (398)
T ss_dssp             HHHHHHTTC-T----T-SCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHH-G--GGSCHHHHHHHHH
T ss_pred             HHHHHHHHh-c----c-cchHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhc-C--CCCCHHHHHHHHH
Confidence            233332222 1    1 1235667788889999999999887642      469999999865 2  2589999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-Ccce
Q 011210          297 SFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFR  375 (491)
Q Consensus       297 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r  375 (491)
                      .+++||+|||+++++|++++|++||++|+|+++|++                      |++|||+|+||++|+++ +++|
T Consensus       232 ~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------------~l~a~i~E~lRl~p~~~~~~~R  289 (398)
T 1lfk_A          232 QVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ----------------------SAQRAVDELIRYLTVPYSPTPR  289 (398)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH----------------------HHHHHHHHHHHHHCCBSCCSCE
T ss_pred             HHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------------HHHHHHHHHHHhCcccccccce
Confidence            999999999999999999999999999999999864                      68999999999999999 6899


Q ss_pred             eecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHH
Q 011210          376 EAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHY  455 (491)
Q Consensus       376 ~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~  455 (491)
                      .+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|++++++.
T Consensus       290 ~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~  363 (398)
T 1lfk_A          290 IAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP------IPHVAFGHGVHHCLGAALARLELRTVFTE  363 (398)
T ss_dssp             EESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC------CCCCTTCCSTTSCTTHHHHHHHHHHHHHH
T ss_pred             ecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC------CCCCCCCCCCCcCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999973      46999999999999999999999999999


Q ss_pred             HHhcC-eEeccCCCCCccc--cccCCCCCCCeEEE
Q 011210          456 FLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKV  487 (491)
Q Consensus       456 ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  487 (491)
                      |+++| ++++.+++.+..+  ....++...+||++
T Consensus       364 ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          364 LWRRFPALRLADPAQDTEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             HHHHCTTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred             HHHhCCCCEeCCCCCccccccCcCcCCcccceeeC
Confidence            99999 8998755444444  34567777777763


No 68 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=8.5e-59  Score=445.42  Aligned_cols=363  Identities=19%  Similarity=0.221  Sum_probs=294.6

Q ss_pred             CCchHHHHHHHHHcCCcceEEeee-CCCcEEEEeChHhHhHHhcCCcccc-c-cc----ccc----ccccccccceeecc
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHI-FGSPCVIVVAPEACKQVFLDDENFK-M-GY----PTS----TNKLTFRGSFITAS  136 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~-~~~~~vvv~~~~~~~~i~~~~~~~~-~-~~----~~~----~~~~~g~~~l~~~~  136 (491)
                      .+++.++.+| ++|||  |+++++ ++.++++++||+.+++++.+++ +. + +.    +..    +....+ .++++. 
T Consensus        16 ~~p~~~~~~l-~~yGp--v~~~~~~g~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~-   89 (396)
T 1n40_A           16 DRIPDAVAEL-RTREP--IRKVRTITGAEAWLVSSYALCTQVLEDRR-FSMKETAAAGAPRLNALTVPPEVV-NNMGNI-   89 (396)
T ss_dssp             SSCCHHHHHH-HHHCS--EEEEECTTSCEEEEECSHHHHHHHHTCTT-EESGGGGSTTCCCSSCCSSCGGGG-GHHHHH-
T ss_pred             cCccHHHHHH-HHhCC--eeEeecCCCceEEEEecHHHHHHHHhCCC-cccccCccccccccccccCCchhh-hhhhhH-
Confidence            4899999999 99999  999998 7889999999999999998864 43 3 21    111    111122 344444 


Q ss_pred             chhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhc-CCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHH
Q 011210          137 KEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWAS-LDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEK  214 (491)
Q Consensus       137 g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~  214 (491)
                        .|+++||++.+ .|+++ ++.+.+.+.+.++++++.+.. ++ ++|+...+ ..++.++++. +||.+.++ ...+.+
T Consensus        90 --~h~~~R~~~~~-~fs~~-~~~~~~~i~~~~~~l~~~l~~~~~-~~d~~~~~~~~~~~~vi~~-~~G~~~~~-~~~~~~  162 (396)
T 1n40_A           90 --ADAGLRKAVMK-AITPK-APGLEQFLRDTANSLLDNLITEGA-PADLRNDFADPLATALHCK-VLGIPQED-GPKLFR  162 (396)
T ss_dssp             --HHTTCHHHHHH-HTSSC-STTHHHHHHHHHHHHHHHHHHHCS-CEETTTTTHHHHHHHHHHH-HHTCCGGG-HHHHHH
T ss_pred             --HHHHHHHHHHH-hhChH-HHHhHHHHHHHHHHHHHHHHhcCC-CccHHHHHHHHhHHHHHHH-HhCCChhh-HHHHHH
Confidence              99999999999 89999 999999999999999999865 44 89998766 4899999998 79998653 223333


Q ss_pred             HHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhh-hhcCCCCCHHHHHH
Q 011210          215 HYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVE-DENGTKLDDLDIID  293 (491)
Q Consensus       215 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~~~~~~~i~~  293 (491)
                      ....+...    .. ..|   ..+..++.+.+ +++.+.++    +..    ..+|+++.+++.. ++++..++++++.+
T Consensus       163 ~~~~~~~~----~~-~~p---~~~~~~~~~~~-~~~~~~i~----~~~----~~~dll~~ll~~~~~~~~~~l~~~~i~~  225 (396)
T 1n40_A          163 SLSIAFMS----SA-DPI---PAAKINWDRDI-EYMAGILE----NPN----ITTGLMGELSRLRKDPAYSHVSDELFAT  225 (396)
T ss_dssp             THHHHTBC----CS-SCC---HHHHHHHHHHH-HHHHHHHH----CTT----CCSHHHHHHHHHHTSGGGTTSCHHHHHH
T ss_pred             HHHHHhcc----cc-CCC---HHHHHHHHHHH-HHHHHHHh----CCC----CCCCHHHHHHHhhcccccCCCCHHHHHH
Confidence            33333221    11 122   24556666677 77777776    111    1479999999875 32445799999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-C
Q 011210          294 MLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-S  372 (491)
Q Consensus       294 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~  372 (491)
                      ++..+++||+|||+++++|++++|++||++|+|+++|+                      .|++|||+|+||++|+++ +
T Consensus       226 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~~l~a~i~E~lRl~p~~~~~  283 (396)
T 1n40_A          226 IGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP----------------------ELIPAGVEELLRINLSFADG  283 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG----------------------GGHHHHHHHHHHTCCCBCSC
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH----------------------HHHHHHHHHHHhhCCCcccc
Confidence            99999999999999999999999999999999999984                      269999999999999999 7


Q ss_pred             cceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHH
Q 011210          373 SFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIF  452 (491)
Q Consensus       373 ~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~  452 (491)
                      ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|+||||.+     ..++|||.|+|.|+|++||++|++++
T Consensus       284 ~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-----~~~~~FG~G~r~C~G~~lA~~e~~~~  358 (396)
T 1n40_A          284 LPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP-----TSHLAFGRGQHFCPGSALGRRHAQIG  358 (396)
T ss_dssp             EEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST-----TCSSTTCCGGGCCTTHHHHHHHHHHH
T ss_pred             cceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC-----CCCCCCCCCCcCCCCHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999963     46999999999999999999999999


Q ss_pred             HHHHHhcC-eEeccCCCCCccc--cccCCCCCCCeEEE
Q 011210          453 IHYFLLNY-KLELQNPECPAEY--LPVPRPSDQCLAKV  487 (491)
Q Consensus       453 l~~ll~~f-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  487 (491)
                      ++.|+++| ++++.+++.+..+  ....++..++||++
T Consensus       359 la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          359 IEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             HHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             HHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence            99999999 5998865333333  34678889999874


No 69 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=2.7e-58  Score=441.10  Aligned_cols=362  Identities=19%  Similarity=0.262  Sum_probs=303.1

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCC----CcEEEEeChHhHhHHhcCCccccccccccc--cccccccceeeccchhHH
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFG----SPCVIVVAPEACKQVFLDDENFKMGYPTST--NKLTFRGSFITASKEGQK  141 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~----~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~--~~~~g~~~l~~~~g~~~~  141 (491)
                      .+++.++.++ ++|||  |+++++++    .++++|+||+.+++++++++.|.++.....  ....+...++..+|+.|+
T Consensus        12 ~~p~~~~~~l-r~yGp--v~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~   88 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGP--LHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDHT   88 (384)
T ss_dssp             TEECHHHHHH-HHTCS--EECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTTHHH
T ss_pred             cChhHHHHHH-HhcCC--eeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCChhHH
Confidence            5899999999 59999  99999876    899999999999999977656655433221  111233566677999999


Q ss_pred             HHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHh
Q 011210          142 RIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAH  221 (491)
Q Consensus       142 ~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~  221 (491)
                      ++|+++.+ .|++++++.+.+.+.+.++++++.+...++++|+...+...+...+...+||.+.++. ..+.+.+..+..
T Consensus        89 ~~R~~~~~-~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~-~~~~~~~~~~~~  166 (384)
T 3oo3_A           89 RLRRTVAP-AYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDDQ-AELSRMIRESRE  166 (384)
T ss_dssp             HHHHHHGG-GGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGH-HHHHHHHHHHHH
T ss_pred             HHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHhc
Confidence            99999999 9999999999999999999999999655558999999999888888888999986542 333333333322


Q ss_pred             cccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhc
Q 011210          222 GLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSA  301 (491)
Q Consensus       222 ~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~a  301 (491)
                                 .....+..++...+.+++.+.+++++++.      .+|+++.+++..   +..++++++.+++..+++|
T Consensus       167 -----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~d~l~~ll~~~---~~~l~~~~l~~~~~~~~~A  226 (384)
T 3oo3_A          167 -----------SRLPRQRTLSGLGIVNYTKRLTSGKRRDP------GDGMIGVIVREH---GAEISDEELAGLAEGNLIM  226 (384)
T ss_dssp             -----------CSCHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHH
T ss_pred             -----------cCChHHHHHHHHHHHHHHHHHHHHHHhCC------CCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHh
Confidence                       11345677888899999999998876542      579999999862   2368999999999999999


Q ss_pred             ccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-Ccceeeccc
Q 011210          302 GHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFREAEAD  380 (491)
Q Consensus       302 g~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~d  380 (491)
                      |+|||+++++|++++|++||++|+++++|++.                      |+|||+|+||++|+++ +++|.+++|
T Consensus       227 G~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~----------------------l~a~i~E~lRl~p~~~~~~~R~~~~d  284 (384)
T 3oo3_A          227 AAEQMAAQLAVAVLLLVTHPDQMALLREKPEL----------------------IDSATEEVLRHASIVEAPAPRVALAD  284 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG----------------------HHHHHHHHHHHHCSCSCCSCEEESSC
T ss_pred             hHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH----------------------HHHHHHHHHHhCCcccCCcceeeCCC
Confidence            99999999999999999999999999999752                      7999999999999998 489999999


Q ss_pred             ceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC
Q 011210          381 VNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY  460 (491)
Q Consensus       381 ~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f  460 (491)
                      ++++|+.||||+.|+++.+++||     +||++|+||||      ...++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       285 ~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  353 (384)
T 3oo3_A          285 VRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF  353 (384)
T ss_dssp             EEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             EEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999     89999999995      56799999999999999999999999999999999


Q ss_pred             -eEeccCCCCCccc---cccCCCCCCCeEEE
Q 011210          461 -KLELQNPECPAEY---LPVPRPSDQCLAKV  487 (491)
Q Consensus       461 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~  487 (491)
                       ++++.+++.+..+   ....++...+||++
T Consensus       354 ~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          354 PSLRLAVPEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             TTCEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred             CCCeeCCCCccceeecccccccCcceeeeeC
Confidence             9999876544444   45678888888864


No 70 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=1.2e-57  Score=436.98  Aligned_cols=369  Identities=17%  Similarity=0.216  Sum_probs=301.3

Q ss_pred             CchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccc-cccccc-ccccceeeccchhHHHHHHh
Q 011210           69 EPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYP-TSTNKL-TFRGSFITASKEGQKRIRKL  146 (491)
Q Consensus        69 ~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~-~~~~~~-~g~~~l~~~~g~~~~~~Rr~  146 (491)
                      +++.++.+++++ ||  |+++..   ..+++++++.++++++++. |..... ...... .+..+++..+|+.|+++||+
T Consensus        21 dp~~~~~~lr~~-~p--v~~~~~---g~~~v~~~~~v~~~l~d~~-fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~   93 (394)
T 2wiy_A           21 NPYPWYRRLQQD-HP--VHKLED---GTYLVSRYADVSHFAKLPI-MSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQ   93 (394)
T ss_dssp             CCHHHHHHHHHH-CS--EEECTT---SCEEECCHHHHHHHTTSTT-EECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHH
T ss_pred             CccHHHHHHHhc-CC--eEEecC---CeEEEcCHHHHHHHHcCCC-ccccccccccccchhcccccccCCchHHHHHHHH
Confidence            789999888665 78  998864   2799999999999998763 332210 011111 22356777899999999999


Q ss_pred             hhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCC
Q 011210          147 ATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISP  226 (491)
Q Consensus       147 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~  226 (491)
                      +.+ .|+++.++.+.+.+.+.++++++.+..++ ++|+...+..++.++++..+||.+.++ ...+.+.+....... . 
T Consensus        94 ~~~-~fs~~~~~~~~~~i~~~~~~l~~~~~~~~-~~d~~~~~~~~~~~vi~~~~~G~~~~~-~~~~~~~~~~~~~~~-~-  168 (394)
T 2wiy_A           94 TNK-WFTPKLVDGWVRTTRELVGDLLDGVEAGQ-VIEARRDLAVVPTHVTMARVLQLPEDD-ADAVMEAMFEAMLMQ-S-  168 (394)
T ss_dssp             HHT-TCSHHHHHHHTHHHHHHHHHHHHTCCTTC-CEEHHHHHTHHHHHHHHHHHHTCCCCC-HHHHHHHHHHHHGGG-S-
T ss_pred             HHh-ccCHHHHHHHHHHHHHHHHHHHHHHhccC-CeeHHHHHHhhhHHHHHHHHcCCCHhH-HHHHHHHHHHHHHhc-c-
Confidence            999 99999999999999999999999987555 899999999999999999999998654 223333322221111 1 


Q ss_pred             CCCCCCC-cchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhccccc
Q 011210          227 FPINLPG-FSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHES  305 (491)
Q Consensus       227 ~~~~~p~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~t  305 (491)
                         ..|. ....+..++...+.+++.+.+++++++.      .+|+++.+++..++ + .++++++.+++..+++||+||
T Consensus       169 ---~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------~~dll~~Ll~~~~~-~-~ls~~el~~~~~~l~~AG~eT  237 (394)
T 2wiy_A          169 ---AEPADGDVDRAAVAFGYLSARVAEMLEDKRVNP------GDGLADSLLDAARA-G-EITESEAIATILVFYAVGHMA  237 (394)
T ss_dssp             ---SSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHHHT-T-SSCHHHHHHHHHHHHHHTTTH
T ss_pred             ---CCccchHHHHHHHHHHHHHHHHHHHHHHhhcCC------CCcHHHHHHHhhhc-C-CCCHHHHHHHHHHHHHhhhhh
Confidence               1121 1234555677788889999998887542      46899999987543 3 589999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCC
Q 011210          306 SAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQG  385 (491)
Q Consensus       306 t~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g  385 (491)
                      |+++++|++++|++||++|+++++|+                      +|+++||+|+||++|+++.++|.+++|++++|
T Consensus       238 Ta~~l~~~l~~L~~~P~~~~~l~~e~----------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G  295 (394)
T 2wiy_A          238 IGYLIASGIELFARRPEVFTAFRNDE----------------------SARAAIINEMVRMDPPQLSFLRFPTEDVEIGG  295 (394)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHCG----------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETT
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHhCh----------------------HhHHHHHHHHHhhCCCccCeeEEECCCEEEcC
Confidence            99999999999999999999999984                      36899999999999999888999999999999


Q ss_pred             eEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCe-Eec
Q 011210          386 YFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYK-LEL  464 (491)
Q Consensus       386 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~  464 (491)
                      +.||||+.|+++.+++||||++|+||++|+||||++.    ..++|||+|+|.|+|+.||++|++++++.|+++|+ +++
T Consensus       296 ~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l  371 (394)
T 2wiy_A          296 VLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA----SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIEL  371 (394)
T ss_dssp             EEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG----SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred             eecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC----CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceE
Confidence            9999999999999999999999999999999999742    46999999999999999999999999999999998 998


Q ss_pred             cCCCCCccccccCCCCCCCeEEE
Q 011210          465 QNPECPAEYLPVPRPSDQCLAKV  487 (491)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~~~~  487 (491)
                      .+ +.++......++...+||++
T Consensus       372 ~~-~~~~~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          372 AE-EPTVAHNDFARRYRKLPIVL  393 (394)
T ss_dssp             SS-CCEECCCSSBCCEEECEEEE
T ss_pred             CC-CCcccccccccCcceeeEEe
Confidence            74 33444455778888899886


No 71 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.5e-57  Score=431.86  Aligned_cols=352  Identities=19%  Similarity=0.258  Sum_probs=292.3

Q ss_pred             chHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc---cc-----c-cccc---ccceeeccc
Q 011210           70 PQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT---ST-----N-KLTF---RGSFITASK  137 (491)
Q Consensus        70 ~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~---~~-----~-~~~g---~~~l~~~~g  137 (491)
                      ++..+.++ ++|||  |++++  |  .+++++|+.+++++.+++.|.+....   .+     . .+.|   ..+++..+|
T Consensus         1 p~~~~~~l-r~~gp--v~~~~--g--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg   73 (367)
T 3b4x_A            1 MYDWFKQM-RKESP--VYYDG--K--VWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDP   73 (367)
T ss_dssp             CHHHHHHH-HHHCS--EEECS--S--SEEECSHHHHHHHHHCTTTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCT
T ss_pred             CCHHHHHH-HHcCC--ceeeC--C--EEEEecHHHHHHHHcCchhhccCcccccccccccccccchhhcccccccccCCc
Confidence            34566766 58999  99987  3  89999999999999987555544211   12     2 3445   366778899


Q ss_pred             hhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHH
Q 011210          138 EGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHY  216 (491)
Q Consensus       138 ~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  216 (491)
                      +.|+++||++++ .|++++++.  +.+.+.++++++.+.  + ++|+...+ ..+++++++. +||.+ ++ ...+.+..
T Consensus        74 ~~h~~~R~~~~~-~fs~~~l~~--~~i~~~~~~l~~~l~--g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~-~~~~~~~~  144 (367)
T 3b4x_A           74 PLHDELRNLTAD-AFNPSNLPV--DFVREVTVKLLSELD--E-EFDVIESFAIPLPILVISK-MLGIN-PD-VKKVKDWS  144 (367)
T ss_dssp             THHHHHHHTTGG-GGSGGGSCH--HHHHHHHHHHHHTCC--S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC-HHHHHHHH
T ss_pred             hhHHHHHHHHHH-hcCHhhhcc--hHHHHHHHHHHHhcc--C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc-HHHHHHHH
Confidence            999999999999 899999988  999999999999987  5 69999765 7999999999 79998 43 33444444


Q ss_pred             HHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHH
Q 011210          217 IDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLI  296 (491)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~  296 (491)
                      ..+...+.   +  .|.. .... ++.+.+.+++.+.+++++++.      .+|+++.+++.      .++++++.+++.
T Consensus       145 ~~~~~~~~---~--~p~~-~~~~-~~~~~~~~~~~~~i~~r~~~~------~~dll~~ll~~------~ls~~el~~~~~  205 (367)
T 3b4x_A          145 DLVALRLG---R--ADEI-FSIG-RKYLELISFSKKELDSRKGKE------IVDLTGKIANS------NLSELEKEGYFI  205 (367)
T ss_dssp             HHHHTTTT---S--TTGG-GCCC-HHHHHHHHHHHHHHHHHTTTC------CSSHHHHHHTS------SSCHHHHHHHHH
T ss_pred             HHHHhccC---C--Chhh-HHHH-HHHHHHHHHHHHHHHHHhcCC------CCCHHHHHHhc------cCCHHHHHHHHH
Confidence            33333211   1  2211 1223 677788889999998876531      56999999975      489999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCccee
Q 011210          297 SFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFRE  376 (491)
Q Consensus       297 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~  376 (491)
                      .+++||+|||+++++|++++|++ |++|+|+++|+              +          ++||+|+||++|++++++|.
T Consensus       206 ~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~--------------~----------~a~i~E~lRl~p~~~~~~R~  260 (367)
T 3b4x_A          206 LLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKG--------------A----------LKAVEEALRFSPPVMRTIRV  260 (367)
T ss_dssp             HHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHC--------------S----------HHHHHHHHHHSCSBCCEEEE
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCC--------------c----------hHHHHHHHHhcCcccCeeEE
Confidence            99999999999999999999999 99999999993              2          89999999999999988999


Q ss_pred             ecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHH
Q 011210          377 AEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYF  456 (491)
Q Consensus       377 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~l  456 (491)
                      +++|++++|+.||||+.|+++.+++||||++|+||++|+||||.      ..++|||.|+|.|+|++||++|++++++.|
T Consensus       261 ~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~l  334 (367)
T 3b4x_A          261 TKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP------NPHLSFGSGIHLCLGAPLARLEARIALEEF  334 (367)
T ss_dssp             ESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             eCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC------CCCcCCCCCCccCccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999983      469999999999999999999999999999


Q ss_pred             HhcC-eEeccCCCCCccccccCCCCCCCeEEEec
Q 011210          457 LLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       457 l~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      +++| ++++.++  ++...+..++..++||+++|
T Consensus       335 l~~f~~~~l~~~--~~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          335 AKKFRVKEIVKK--EKIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             HHHEEEEEEEEE--EECCCSSBCSEEEEEEEEEE
T ss_pred             HHhCCCceeCCc--cccccccccCcceEEEEecC
Confidence            9999 7998764  44445678888999999875


No 72 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=7.5e-58  Score=441.52  Aligned_cols=371  Identities=16%  Similarity=0.187  Sum_probs=303.0

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc---------cccccccccceeeccch
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT---------STNKLTFRGSFITASKE  138 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~g~~~l~~~~g~  138 (491)
                      .+++.+  ++.++||+  |+++.+++.. ++|++++.++++++++.........         ......+ .+++..+|+
T Consensus        33 ~~P~~~--~~lr~~gp--v~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~dg~  106 (416)
T 3p3o_A           33 NFSWDS--PEVAEARE--KSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMV-DFLQSLDGA  106 (416)
T ss_dssp             TCCTTS--HHHHHHHH--HCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHH-HSGGGCCHH
T ss_pred             cCCchH--HHHHHhCC--ccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhc-CccccCCch
Confidence            478888  56678999  9999886666 9999999999999887522211100         0111112 467778999


Q ss_pred             hHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHH
Q 011210          139 GQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYI  217 (491)
Q Consensus       139 ~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~  217 (491)
                      +|+++||++++ .|+++.++.+.+.+.+.++++++.+ .++ ++|+...+ ..++.++++. +||.+.++.     +.+.
T Consensus       107 ~h~~~Rr~~~~-~fs~~~l~~~~~~i~~~~~~ll~~l-~~g-~~d~~~~~~~~~~~~vi~~-l~G~~~~~~-----~~~~  177 (416)
T 3p3o_A          107 DHRRLRGLATH-PFTPRRITAVQPFVRSTVEQLIDKL-PQG-DFDFVQHFPHPLPALVMCQ-LLGFPLEDY-----DTVG  177 (416)
T ss_dssp             HHHHHHHTTCG-GGSHHHHHHHHHHHHHHHHHHHHTC-CSS-SEEHHHHTTTHHHHHHHHH-HHTCCGGGH-----HHHH
T ss_pred             HHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHhh-ccC-CccHHHHHHHHHHHHHHHH-HhCCCHHHH-----HHHH
Confidence            99999999999 9999999999999999999999999 666 79977665 5699999998 589875542     2233


Q ss_pred             HHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHH
Q 011210          218 DYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLIS  297 (491)
Q Consensus       218 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~  297 (491)
                      .....+...+....+.....+..++.+.+.+++.+.+++++++.      .+|+++.+++..+++  .++++++.+++..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------~~dll~~ll~~~~~~--~ls~~el~~~~~~  249 (416)
T 3p3o_A          178 RLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEP------GDDLTSDIVRAFHDG--VLDDYELRTLVAT  249 (416)
T ss_dssp             HHHHTTCGGGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------CSSHHHHHHHHHHTT--SSCHHHHHHHHHH
T ss_pred             HHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCC------CccHHHHHHHhhccC--CCCHHHHHHHHHH
Confidence            33333322122212222345677888899999999999887652      579999999876543  7999999999999


Q ss_pred             HHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCC-Cccee
Q 011210          298 FLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSP-SSFRE  376 (491)
Q Consensus       298 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~  376 (491)
                      +++||+|||+++++|++++|++||++|+|+++|++                      |+++||+|+||++|+++ +++|.
T Consensus       250 l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~----------------------~l~a~i~E~lRl~p~~~~~~~R~  307 (416)
T 3p3o_A          250 VLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE----------------------LAPQAVEEVLRWSPTLPVTATRV  307 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------------GHHHHHHHHHHHSCSCSSCCEEE
T ss_pred             HHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH----------------------HHHHHHHHHHhhccccccCcceE
Confidence            99999999999999999999999999999999853                      68999999999999994 78999


Q ss_pred             ecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHH
Q 011210          377 AEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYF  456 (491)
Q Consensus       377 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~l  456 (491)
                      +++|++++|+.||||+.|+++.+++||||++|+||++|+|+||.     ...++|||.|+|.|+|++||++|++++++.|
T Consensus       308 ~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~-----~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~l  382 (416)
T 3p3o_A          308 AAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKR-----EAPSIAFGGGPHFCLGTALARLELTEAVAAL  382 (416)
T ss_dssp             ESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCC-----SSCCCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred             eCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCC-----CCCeecCCCCCccCcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999973     3469999999999999999999999999999


Q ss_pred             HhcC-eEeccCCCCCccccccCCCCCCCeEEEec
Q 011210          457 LLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       457 l~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      +++| ++++..+. ++......+....+||++.+
T Consensus       383 l~~f~~~~l~~~~-~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          383 ATRLDPPQIAGEI-TWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             HHHSCCEEECSCC-EECCCTTCCCEEECEEEESC
T ss_pred             HHhCCccccCCCC-ceecCCCccCcceeeEEEec
Confidence            9999 48886443 44445577888899999865


No 73 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=3.7e-57  Score=429.95  Aligned_cols=354  Identities=18%  Similarity=0.260  Sum_probs=289.8

Q ss_pred             chHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccc--c-ccc----cc--cc--c-cceeeccc
Q 011210           70 PQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYP--T-STN----KL--TF--R-GSFITASK  137 (491)
Q Consensus        70 ~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~--~-~~~----~~--~g--~-~~l~~~~g  137 (491)
                      ++..+.++ ++|||  |+++   | +.+++++|+.+++++.+++.|.+...  . ...    ..  ++  . .+++..+|
T Consensus         1 p~~~~~~l-r~~Gp--v~~~---g-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g   73 (368)
T 1io7_A            1 MYDWFSEM-RKKDP--VYYD---G-NIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDP   73 (368)
T ss_dssp             CHHHHHHH-HHHCS--EEEC---S-SCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCT
T ss_pred             CCHHHHHH-HhcCC--eEeE---C-CEEEEecHHHHHHHHcCcccccccccccccccccccccccccccccccccccCCC
Confidence            35567777 59999  9987   3 58999999999999998765554432  0 011    01  22  2 56777899


Q ss_pred             hhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHH
Q 011210          138 EGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHY  216 (491)
Q Consensus       138 ~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~  216 (491)
                      +.|+++||++.+ .|++++++.+.+.+.+.++++++.+ ..+ ++|+..++ ..+++++++.+ ||.+.++.     +.+
T Consensus        74 ~~h~~~R~~~~~-~f~~~~~~~~~~~i~~~~~~l~~~l-~~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~-----~~~  144 (368)
T 1io7_A           74 PLHDELRSMSAD-IFSPQKLQTLETFIRETTRSLLDSI-DPR-EDDIVKKLAVPLPIIVISKI-LGLPIEDK-----EKF  144 (368)
T ss_dssp             THHHHHHGGGTT-TTCHHHHHHHHHHHHHHHHHHHHTC-CTT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGH-----HHH
T ss_pred             hHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHHHh-hcC-CccHHHHHHHHHHHHHHHHH-hCCCHHHH-----HHH
Confidence            999999999999 9999999999999999999999999 666 89999877 78999999999 99986542     233


Q ss_pred             HHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHH
Q 011210          217 IDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLI  296 (491)
Q Consensus       217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~  296 (491)
                      ......+.... . .|. ..++..++.+.+.+++.+.+     +      +.+|+++.+++.      .++++++.+++.
T Consensus       145 ~~~~~~~~~~~-~-~p~-~~~~~~~~~~~~~~~~~~~i-----~------~~~d~l~~ll~~------~l~~~ei~~~~~  204 (368)
T 1io7_A          145 KEWSDLVAFRL-G-KPG-EIFELGKKYLELIGYVKDHL-----N------SGTEVVSRVVNS------NLSDIEKLGYII  204 (368)
T ss_dssp             HHHGGGCTTSC-C-CTT-CHHHHHHHHHHHHHHHHHHT-----T------SSCHHHHHHHTS------SCCHHHHHHHHH
T ss_pred             HHHHHHHHhcc-C-ChH-HHHHHHHHHHHHHHHHHHHh-----C------CCCCHHHHHHhc------cCCHHHHHHHHH
Confidence            33444333311 0 132 23445566667777777666     1      156899999975      489999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCccee
Q 011210          297 SFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFRE  376 (491)
Q Consensus       297 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~  376 (491)
                      .+++||+|||+++++|++++|++|| +|+|+++| +                      |++|||+|++|++|++++++|.
T Consensus       205 ~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~----------------------~l~a~i~E~lRl~p~~~~~~R~  260 (368)
T 1io7_A          205 LLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N----------------------LYLKAIEEALRYSPPVMRTVRK  260 (368)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T----------------------CHHHHHHHHHHHSCSBCCEEEE
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c----------------------hHHHHHHHHHHhCcccccCcee
Confidence            9999999999999999999999999 99999998 2                      4899999999999999988999


Q ss_pred             ecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHH
Q 011210          377 AEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYF  456 (491)
Q Consensus       377 ~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~l  456 (491)
                      +++|++++|+.||||+.|.++.+++||||++|+||++|+|||+      +..++|||.|+|.|+|++||++|++++++.|
T Consensus       261 ~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l  334 (368)
T 1io7_A          261 TKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN------PNPHLSFGSGIHLCLGAPLARLEARIAIEEF  334 (368)
T ss_dssp             ESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHH
T ss_pred             eCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999993      3568999999999999999999999999999


Q ss_pred             HhcCe-EeccCCCCCccccccCCCCCCCeEEEeccC
Q 011210          457 LLNYK-LELQNPECPAEYLPVPRPSDQCLAKVVGFK  491 (491)
Q Consensus       457 l~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (491)
                      +++|+ +++.+  .++......++..+++|++++|.
T Consensus       335 l~~f~~~~~~~--~~~~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          335 SKRFRHIEILD--TEKVPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             HTTCSEEEEEE--EEECCCSSBCCEEEEEEEEEC--
T ss_pred             HHhCCCCEecC--ceeccCCcccCCceeEEEeccCC
Confidence            99996 99875  33334457788899999999884


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.7e-56  Score=421.25  Aligned_cols=336  Identities=21%  Similarity=0.231  Sum_probs=270.0

Q ss_pred             HHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccc-cccccccccceeeccchhHHHHHHhhhccCcChhhh
Q 011210           79 ERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPT-STNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAI  157 (491)
Q Consensus        79 ~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~-~~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l  157 (491)
                      ++|||  |+++   |  ++++++|+.+++++.+++.|.++... ....  +..+++..+|+.|+++||++++ .|+++++
T Consensus         2 r~~gp--v~~~---g--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~--~~~~l~~~~g~~~~~~R~~~~~-~fs~~~l   71 (343)
T 2rfb_A            2 RLNDP--VHYD---G--AWHVYKYSDVKHVLMNDKIFSSNPGNRYSNA--GGISFITMDNPEHKEFRDISAP-YFLPSKI   71 (343)
T ss_dssp             -CCCC--EEET---T--EEEECSHHHHHHHHHCTTTEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHH-HHSHHHH
T ss_pred             CCcCC--eeee---C--eEEEcCHHHHHHHHhChhhcccCCcCCCCCc--cccccccCCchHHHHHHHHhhh-hcCHHHH
Confidence            58999  9986   3  99999999999999987655544211 1122  3356777899999999999999 9999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCc-c
Q 011210          158 VVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGF-S  235 (491)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~  235 (491)
                      +.+.+.+.+.++++++.+.    ++|+..++ ..+++++++.+ ||.+.++ ...+.+....+...    +   .|.. .
T Consensus        72 ~~~~~~i~~~~~~l~~~l~----~~d~~~~~~~~~~~~vi~~~-~G~~~~~-~~~~~~~~~~~~~~----~---~p~~~~  138 (343)
T 2rfb_A           72 NDYKDFIEETSNDLIKNID----NKDIISEYAVRLPVNIISKI-LGIPDSD-MPLFKLWSDYIIGN----K---RDENFN  138 (343)
T ss_dssp             GGGHHHHHHHHHHHHTTCT----TSCHHHHTTTHHHHHHHHHH-HTCCGGG-HHHHHHHHHHHHTS----C---CSSHHH
T ss_pred             HHHHHHHHHHHHHHHHhcc----ccCHHHHHhhhhhHHHHHHH-cCCCHHH-HHHHHHHHHHHhhc----c---Ccchhh
Confidence            9999999999999999986    69998866 89999999998 9988653 22333333333221    1   1321 1


Q ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 011210          236 FHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALI  315 (491)
Q Consensus       236 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  315 (491)
                      ..+. ++.+.+.+++.+.+             .+| ++.+++..+ ++..++++++.+++..+++||+|||+++++|+++
T Consensus       139 ~~~~-~~~~~~~~~~~~~i-------------~~d-l~~ll~~~~-~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~  202 (343)
T 2rfb_A          139 YVNN-RMVSRLLEIFKSDS-------------HGI-INVLAGSSL-KNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIR  202 (343)
T ss_dssp             HHHH-HHHHHHHHHHHSCC-------------SSH-HHHHHTCBC-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHH-------------hcc-HHHHHhhhc-CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            2233 44445555544433             246 888887643 3446999999999999999999999999999999


Q ss_pred             HHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCC-CCcceeecccceeCCeEeCCCCEE
Q 011210          316 HLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLS-PSSFREAEADVNIQGYFIPKGWKV  394 (491)
Q Consensus       316 ~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~-~~~~r~~~~d~~l~g~~ip~G~~v  394 (491)
                      +|++||++|+|+++|+                         +|||+|+||++|++ ++++|.+.+|++++|+.||||+.|
T Consensus       203 ~L~~~P~~~~~l~~E~-------------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V  257 (343)
T 2rfb_A          203 VIDENPDIIDDALKNR-------------------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQV  257 (343)
T ss_dssp             HHHHCGGGHHHHHHCH-------------------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTCEE
T ss_pred             HHHhCHHHHHHHHcCc-------------------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCCEE
Confidence            9999999999999983                         89999999999999 889999999999999999999999


Q ss_pred             EEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcCe-EeccCCCCCccc
Q 011210          395 LVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNYK-LELQNPECPAEY  473 (491)
Q Consensus       395 ~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~  473 (491)
                      +++.+++||||++|+||++|+||||       ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.+++.++..
T Consensus       258 ~~~~~~~~rd~~~~~dp~~F~PeR~-------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  330 (343)
T 2rfb_A          258 IVYLGSANRDETFFDEPDLFKIGRR-------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRLLD  330 (343)
T ss_dssp             EECHHHHTTCTTTSSSTTSCCTTCS-------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTTTCEECS
T ss_pred             EEChhhhCCCcccCCCccccCCCCC-------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCCcccccc
Confidence            9999999999999999999999995       46899999999999999999999999999999996 998764323333


Q ss_pred             cccCCCCCCCeE
Q 011210          474 LPVPRPSDQCLA  485 (491)
Q Consensus       474 ~~~~~~~~~~~~  485 (491)
                      .+..+....+||
T Consensus       331 ~~~~~~~~~lpv  342 (343)
T 2rfb_A          331 NKMVLGYDKLFL  342 (343)
T ss_dssp             CTTBCCEEECCB
T ss_pred             CcCcCCcccccc
Confidence            445666666665


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=1.8e-55  Score=423.68  Aligned_cols=384  Identities=15%  Similarity=0.164  Sum_probs=289.8

Q ss_pred             CCCCcccc---ccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccccc--
Q 011210           49 DMGWPLVG---NMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTST--  123 (491)
Q Consensus        49 p~~~P~~G---~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~--  123 (491)
                      +.|+|.+|   .-..+..     ||+.++.+++ ++||  |+++  .+..+++|++++++++++++++.|++......  
T Consensus        17 ~~~~P~~~~dp~~~~~~~-----dP~~~~~~lR-~~gP--V~~~--~~~~~~~vt~~~~v~~vl~d~~~fs~~~~~~~~~   86 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFA-----DPYPEQETLR-EAGP--VVYL--DKWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSD   86 (412)
T ss_dssp             STTSCEECCCTTSHHHHH-----SCHHHHHHHH-HHCS--SEEE--TTTTEEEECSHHHHHHHHTCTTTEESTTCSSSSC
T ss_pred             CCCCCccCCCCCCHHHHh-----CcHHHHHHHH-hcCC--EEEE--CCCCEEEECCHHHHHHHHcCCccccCCCcccccc
Confidence            45688887   2344554     8999998775 5799  9865  45679999999999999998876655432211  


Q ss_pred             ----cccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHH-HHHHHHHHHHHH
Q 011210          124 ----NKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLT-EMRKATFKIIAN  198 (491)
Q Consensus       124 ----~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~-~~~~~~~~~~~~  198 (491)
                          ....+...++..||++|+++||++++ .|++++++.+.+.+.+.++++++.+...+.++|+.. ....+...+++.
T Consensus        87 ~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~-~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~D~v~~~~~~~~~~~i~~  165 (412)
T 4dnj_A           87 FKKEKPWRPPSLILEADPPAHTRTRAVLSK-VLSPATMKRLRDGFAAAADAKIDELLARGGNIDAIADLAEAYPLSVFPD  165 (412)
T ss_dssp             TTTSCCSSCCCTTTTCCTTHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHHHHHTTSEEETCCCCCCHHHHHHHHH
T ss_pred             ccccccccCCCccccCChHHHHHHHhhccc-ccCHHHHHHhhHHHHHHHHHHHHhhhccCCCceeHHHHHhhhhHhHHHH
Confidence                11223355677899999999999999 999999999999999999999999865544888754 445666777766


Q ss_pred             HhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhh
Q 011210          199 IFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEV  278 (491)
Q Consensus       199 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~  278 (491)
                      + +|...... ..+......+......      ..    ...+........+...+.+..+....    .++.+..++..
T Consensus       166 l-~g~~~~~~-~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~  229 (412)
T 4dnj_A          166 A-MGLKQEGR-ENLLPYAGLVFNAFGP------PN----ELRQSAIERSAPHQAYVAEQCQRPNL----APGGFGACIHA  229 (412)
T ss_dssp             H-HTCCSTTG-GGHHHHHHHHHHHTSC------SS----HHHHHHHHTCHHHHHHHHHHTSGGGS----CTTSHHHHHHH
T ss_pred             H-cCCchhhh-hhhhhhhhcccccccc------cH----HHHHHHHHHHHHHHHHHHHHHHhhcc----ccccchhhhHh
Confidence            5 55543332 1222222222211111      11    11111111122222222222222111    33445555554


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHH
Q 011210          279 EDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAK  358 (491)
Q Consensus       279 ~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a  358 (491)
                      . .++..++++++.+++..+++||+|||+++++|++++|++||++|+||++|.                      .++.+
T Consensus       230 ~-~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~----------------------~~~~~  286 (412)
T 4dnj_A          230 F-SDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP----------------------SLARN  286 (412)
T ss_dssp             T-TTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------------GGHHH
T ss_pred             h-hhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc----------------------ccccc
Confidence            3 344579999999999999999999999999999999999999999999863                      36789


Q ss_pred             HHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 011210          359 VIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRI  438 (491)
Q Consensus       359 ~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~  438 (491)
                      +++|++|++|+++.+.|.+++|++|+|+.||||+.|+++.+++||||++|+||++|+||||      ...|+|||.|+|.
T Consensus       287 ~~eE~lR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~------~~~~lpFG~G~r~  360 (412)
T 4dnj_A          287 AFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRK------TSGHVGFGSGVHM  360 (412)
T ss_dssp             HHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC------CTTCCTTCCSTTS
T ss_pred             ccceeeeecCCcccccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCC------CCCCCCcCCCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999996      4569999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCccccccCCCCCCCeEEEec
Q 011210          439 CPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEYLPVPRPSDQCLAKVVG  489 (491)
Q Consensus       439 C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (491)
                      |+|++||++|++++|+.|+++| ++++.+ +.++....+.++..++||++++
T Consensus       361 CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~-~~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          361 CVGQLVARLEGEVVLAALARKVAAIEIAG-PLKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHEEEEEECS-CCEEEECSSBEEEEECEEEEEE
T ss_pred             ChhHHHHHHHHHHHHHHHHHHCCCCeECC-CCeeecCCCccCCcceeEEEEe
Confidence            9999999999999999999999 899874 4455666778888999999975


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=3.7e-53  Score=406.59  Aligned_cols=375  Identities=16%  Similarity=0.181  Sum_probs=294.8

Q ss_pred             CCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCccccccccccc--cccccccceeeccchhHHHHHH
Q 011210           68 SEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYPTST--NKLTFRGSFITASKEGQKRIRK  145 (491)
Q Consensus        68 ~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~--~~~~g~~~l~~~~g~~~~~~Rr  145 (491)
                      .+++..+.+++++.++. ++....+ ...++|++++.+++++++++.|++......  ....+...+...|+++|+++||
T Consensus        37 ~~~~~~~~~lr~~~~~~-~~~~~~~-gg~W~vtr~~dv~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rr  114 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPD-LIWTPFT-GGHWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRK  114 (417)
T ss_dssp             GCHHHHHHHHSCTTCCS-EEEESST-TSEEEECSHHHHHHHHTCTTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHH
T ss_pred             cChHHHHHHHHhhCCCC-EEecCCC-CCEEEECCHHHHHHHHcCchhccCCCcccccccccccccCcccCCcHHHHHHHH
Confidence            47888888777655431 6655443 368999999999999999877765432211  1111223455679999999999


Q ss_pred             hhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHHHHHHHHHHHHHhcCCCCchhhhhHHHHHHHHHhcccC
Q 011210          146 LATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEMRKATFKIIANIFLGSSSDSVIGSVEKHYIDYAHGLIS  225 (491)
Q Consensus       146 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  225 (491)
                      ++++ .|++++++.+.+.+.+.++++++.+...+ ++|+...+.......+...++|...++. ..+.+    ....+..
T Consensus       115 ll~~-~Fs~~~l~~~~~~i~~~~~~lld~l~~~g-~~D~v~~~a~~l~~~vi~~llg~~~~d~-~~~~~----~~~~~~~  187 (417)
T 4dxy_A          115 ALDK-GLNLAKIRKVEDKVREVASSLIDSFAARG-ECDFAAEYAELFPVHVFMALADLPLEDI-PVLSE----YARQMTR  187 (417)
T ss_dssp             HHHH-HHCHHHHHTTHHHHHHHHHHHHHHHHTTS-EEEHHHHTTTTHHHHHHHHHTTCCGGGH-HHHHH----HHHHHHS
T ss_pred             Hhhh-hcCHHHHHHHHHHHHHHHHHHHHHhhhcC-CeeeHHHHHhhhHHHHHHHHcCCCHHHH-HHHHh----hhhhhcc
Confidence            9999 99999999999999999999999998777 8998777755444445555688875442 22222    2222222


Q ss_pred             CCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHHHHHHhhhhhcCCCCCHHHHHHHHHHHHhccccc
Q 011210          226 PFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLIDLLMEVEDENGTKLDDLDIIDMLISFLSAGHES  305 (491)
Q Consensus       226 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~t  305 (491)
                       .....+........++...+..++.++++++++..      .+|+++.++... .++..++++++..++..+++||+||
T Consensus       188 -~~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~------~ddl~s~L~~~~-~~~~~~~~~e~~~~~~~ll~AG~eT  259 (417)
T 4dxy_A          188 -PEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGD------GDDLITLMVNSE-INGERIAHDKAQGLISLLLLGGLDT  259 (417)
T ss_dssp             -CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------CCSHHHHHHTCE-ETTEECCHHHHHHHHHHHHHHTTHH
T ss_pred             -ccccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------ccchhhhhcccc-ccCCccchhHHHHHHHHHHhhcccc
Confidence             22223333344566777888889999888876542      578999998765 3455799999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhcccCCCCCCcceeecccceeCC
Q 011210          306 SAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETLRMTNLSPSSFREAEADVNIQG  385 (491)
Q Consensus       306 t~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g  385 (491)
                      |+++++|++++|++||++++++++|...+.                       ...|.+|++++++.+.|.+++|++++|
T Consensus       260 Ta~~l~~~~~~L~~~P~~~~~l~~e~~~~~-----------------------~avee~~~~~~~~~~~R~a~~d~~l~G  316 (417)
T 4dxy_A          260 VVNFLSFFMIHLARHPELVAELRSDPLKLM-----------------------RGAEEMFRRFPVVSEARMVAKDQEYKG  316 (417)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHCHHHHH-----------------------HTHHHHHHHSCCBEEEEEECSCEEETT
T ss_pred             hhhHHHHHHHHHHhCchhhhhhccCccccc-----------------------cceeeeeccccccccccccccceEecC
Confidence            999999999999999999999999966431                       223444455565678899999999999


Q ss_pred             eEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHHHHHhcC-eEec
Q 011210          386 YFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPFGGGSRICPGADLAKLEISIFIHYFLLNY-KLEL  464 (491)
Q Consensus       386 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~  464 (491)
                      +.||+|+.|+++.+++||||++|+||++|+|||      .+..|+|||+|+|.|+|++||++|++++|+.|+++| ++++
T Consensus       317 ~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR------~~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l  390 (417)
T 4dxy_A          317 VFLKRGDMILLPTALHGLDDAANPEPWKLDFSR------RSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSF  390 (417)
T ss_dssp             EEECTTCEEEEETHHHHTCTTTSSSTTSCCTTC------SCCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEE
T ss_pred             ccccCCCEEEEeehhhcCChhhCCCccccCCCC------CCCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCcee
Confidence            999999999999999999999999999999999      567799999999999999999999999999999999 9999


Q ss_pred             cCCCCCccccccCCCCCCCeEEEe
Q 011210          465 QNPECPAEYLPVPRPSDQCLAKVV  488 (491)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~~~~~  488 (491)
                      .+++.++......++...+||++.
T Consensus       391 ~~~~~~~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          391 KEGETPIYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             CTTCCCEEECSSBCEEECCEEECC
T ss_pred             CCCCCeeecCCcccCceeeeEEee
Confidence            877777766777788888999875


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=3.7e-50  Score=376.87  Aligned_cols=334  Identities=16%  Similarity=0.177  Sum_probs=235.3

Q ss_pred             CCCC-CCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCCCcEEEEeChHhHhHHhcCCcccccccc---
Q 011210           45 LPPG-DMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFGSPCVIVVAPEACKQVFLDDENFKMGYP---  120 (491)
Q Consensus        45 ~pPg-p~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~---  120 (491)
                      +||| +.+||++|+...+.......+++.++.+++++  |  |+++.   .+.+++++++.+++++.++ .|.+...   
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--p--V~~~~---~~~~vv~~~~~v~~vl~d~-~f~~~~~~~~  106 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--G--VRRSR---TETWVVADHATARQVLDDP-AFTRATGRTP  106 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--C--EEECS---SSCEEECSHHHHHHHHHCS-SEESSCCCCC
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--C--ceeCC---CCEEEEcCHHHHHHHHcCC-CcCCCccccc
Confidence            5677 44789999877654333346899999998876  8  99874   5689999999999999985 3443311   


Q ss_pred             cc-------ccccccccceeeccchhHHHHHHhhhccCcChhhhHHHHHHHHHHHHHHHhhhhcCCCCeehHHHH-HHHH
Q 011210          121 TS-------TNKLTFRGSFITASKEGQKRIRKLATSPLKGHKAIVVYIDNIEEIVIKSLKGWASLDTPIEFLTEM-RKAT  192 (491)
Q Consensus       121 ~~-------~~~~~g~~~l~~~~g~~~~~~Rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~-~~~~  192 (491)
                      ..       ... ++ .+++..||++|       .+ .|+     . .+.+++.++++++.+.  + ++|+..++ ..++
T Consensus       107 ~~~~~~~~~~~~-~~-~~l~~~dg~~H-------~~-~Ft-----~-~~~i~~~~~~ll~~~~--g-~~Dl~~~~a~~l~  167 (381)
T 2yjn_B          107 EWMRAAGAPPAE-WA-QPFRDVHAASW-------EG-EVP-----D-VGELAESFAGLLPGAG--A-RLDLVGDFAWQVP  167 (381)
T ss_dssp             HHHHHHTCCHHH-HT-HHHHHHHHCCC-------CS-CCC-----C-CSCHHHHTSTTSCC---------CCCCCCTHHH
T ss_pred             ccccccccccch-hh-hhhhhCCchhh-------hh-ccC-----C-hHHHHHHHHHHHHhcc--C-cchHHHHHHHHHH
Confidence            01       111 23 45666789999       55 777     3 7788888899999886  5 79999776 6999


Q ss_pred             HHHHHHHhcCCCCchhhhhHHHHHHHHHhcccCCCCCCCCCcchHHHHHHHHHHHHHhHHHHHHHHHchhhhccccccHH
Q 011210          193 FKIIANIFLGSSSDSVIGSVEKHYIDYAHGLISPFPINLPGFSFHKAMKARDMLGEILQPVLNERRAMKSDEQKGRKGLI  272 (491)
Q Consensus       193 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (491)
                      +++++++ ||.+.++.  .+.+.+.....     .+  .+.....+   ..                          +.+
T Consensus       168 ~~vi~~l-~G~~~~~~--~~~~~~~~~~~-----~~--~~~~~~~~---~~--------------------------~~~  208 (381)
T 2yjn_B          168 VQGMTAV-LGAAGVLR--GAAWDARVSLD-----AQ--LSPQQLAV---TE--------------------------AAV  208 (381)
T ss_dssp             HHHHHTC------CCH--HHHHHHTTHHH-----HT--TSCCCHHH---HH--------------------------HHH
T ss_pred             HHHHHHH-cCCCHHHH--HHHHHHHHhcc-----CC--CCHHHHHH---HH--------------------------HHH
Confidence            9999995 99987653  22211111000     00  00000000   00                          001


Q ss_pred             HHHHhhhhhcCCCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhc
Q 011210          273 DLLMEVEDENGTKLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQ  352 (491)
Q Consensus       273 ~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~  352 (491)
                      +.           +.+    +++..+++||+|||+++++|++++|++||++++++++|++                    
T Consensus       209 ~~-----------l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------------------  253 (381)
T 2yjn_B          209 AA-----------LPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA--------------------  253 (381)
T ss_dssp             HH-----------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--------------------
T ss_pred             HH-----------HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH--------------------
Confidence            00           111    6788899999999999999999999999999999999842                    


Q ss_pred             cHHHHHHHHHhcccCCCCCCcceeecccceeCCeEeCCCCEEEEcccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 011210          353 MEYLAKVIAETLRMTNLSPSSFREAEADVNIQGYFIPKGWKVLVYNRGVHYNPENYPDPKQFDPSRWDNHTTRPGSFIPF  432 (491)
Q Consensus       353 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~F  432 (491)
                        |++++|+|+||++|+++.+.|.+++|++++|+.||||+.|+++.+++||||++|+||++|+|+||.+     ..+++|
T Consensus       254 --~l~~~i~E~LR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~-----~~~l~F  326 (381)
T 2yjn_B          254 --AAQRTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA-----DRALSA  326 (381)
T ss_dssp             ----HHHHHHHHHHSCSCSEEEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC-----CCCCC-
T ss_pred             --HHHHHhCeeeeecCCCcceeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC-----CCccCC
Confidence              7899999999999999988899999999999999999999999999999999999999999999964     579999


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcC-eEeccCCCCCccccccCCCCCCCeEEE
Q 011210          433 GGGSRICPGADLAKLEISIFIHYFLLNY-KLELQNPECPAEYLPVPRPSDQCLAKV  487 (491)
Q Consensus       433 g~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (491)
                      |.| |.|+|+.||++|++++++.|+++| ++++.+++..+...+..++..++||++
T Consensus       327 G~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~~~~~~~~~~r~~~~LpV~l  381 (381)
T 2yjn_B          327 HRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPVVRRRRSPVLRGTNRCPVEL  381 (381)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CCEECTTCSSSCCEEECCCC-
T ss_pred             CCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCCcccccCcccCCCccceeeC
Confidence            999 999999999999999999999999 999876542333345678888888764


No 78 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=38.15  E-value=50  Score=23.75  Aligned_cols=57  Identities=21%  Similarity=0.284  Sum_probs=39.9

Q ss_pred             CCCCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeC------CCcEEEEeChHhHhHHhc
Q 011210           45 LPPGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIF------GSPCVIVVAPEACKQVFL  110 (491)
Q Consensus        45 ~pPgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~------~~~~vvv~~~~~~~~i~~  110 (491)
                      +||.|..--++|++..       .-....+.++..+||+  |..+.+.      |.-+|-..+++.+...+.
T Consensus         3 ~~~~~~~~l~V~nlp~-------~~t~~~l~~~F~~~G~--v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~   65 (115)
T 3lqv_A            3 LPPEVNRILYIRNLPY-------KITAEEMYDIFGKYGP--IRQIRVGNTPETRGTAYVVYEDIFDAKNAVD   65 (115)
T ss_dssp             CCTTCCSEEEEESCCT-------TCCHHHHHHHHHTTSC--EEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-------CCCHHHHHHHHHhcCC--eEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence            4555555667888742       2356678889999999  8888762      245666788888877765


No 79 
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=32.31  E-value=74  Score=23.87  Aligned_cols=71  Identities=11%  Similarity=0.161  Sum_probs=44.0

Q ss_pred             CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhhCchHHHHHHHHHHHHHhcCCCCCCCCCHHHHhccHHHHHHHHHhc
Q 011210          285 KLDDLDIIDMLISFLSAGHESSAHIATWALIHLHKHPQTLRKAKEEQEDIIKKRPSTQKGLTIEEIKQMEYLAKVIAETL  364 (491)
Q Consensus       285 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  364 (491)
                      .++++.+...+-.+- ...+...++..|++.+--...++.+-+.+++...          .....+.-|=.++.+++.+-
T Consensus         3 sf~~~~l~~~L~~L~-~s~~sI~~~s~w~l~~~~~a~~iv~~i~~~l~~~----------~~~~KL~~LYLindIl~ns~   71 (135)
T 4fu3_A            3 SFSESALEKKLSELS-NSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKA----------KSNRKLTFLYLANDVIQNSK   71 (135)
T ss_dssp             CCCHHHHHHHHHHCC-SSTTHHHHHHHHHHHTGGGHHHHHHHHHHHHHHS----------CTTTHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccchhHHHHHHHHHHHHHHH
Confidence            456665555555443 5567777777888877666566666665555432          22245666667888888776


Q ss_pred             cc
Q 011210          365 RM  366 (491)
Q Consensus       365 Rl  366 (491)
                      |-
T Consensus        72 ~~   73 (135)
T 4fu3_A           72 RK   73 (135)
T ss_dssp             TT
T ss_pred             hc
Confidence            54


No 80 
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=31.56  E-value=49  Score=21.92  Aligned_cols=40  Identities=15%  Similarity=0.311  Sum_probs=29.6

Q ss_pred             chHHHHHHHHHcCCcceEEeeeC-------CCcEEEEeChHhHhHHhcC
Q 011210           70 PQSFIYNLFERYGRKGIYRNHIF-------GSPCVIVVAPEACKQVFLD  111 (491)
Q Consensus        70 ~~~~~~~~~~~yG~~~v~~~~~~-------~~~~vvv~~~~~~~~i~~~  111 (491)
                      ..+.+.++..+||+  |..+.+.       |.-.|-..+++.++..+..
T Consensus        20 t~~~l~~~F~~~G~--i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~   66 (81)
T 2krb_A           20 LKNVIHKIFSKFGK--ITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN   66 (81)
T ss_dssp             HHHHHHHHHHTTCC--EEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHHHhhcCC--eEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence            45778889999999  9888764       2345666788888877654


No 81 
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=30.65  E-value=40  Score=18.16  Aligned_cols=6  Identities=33%  Similarity=0.307  Sum_probs=2.4

Q ss_pred             HHHHHh
Q 011210           22 VFGVLR   27 (491)
Q Consensus        22 ~~~~~~   27 (491)
                      .++.|+
T Consensus        26 tflywr   31 (40)
T 2l9u_A           26 TFLYWR   31 (40)
T ss_dssp             HHHHHH
T ss_pred             eeEEEc
Confidence            333444


No 82 
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=28.08  E-value=57  Score=22.25  Aligned_cols=53  Identities=13%  Similarity=0.145  Sum_probs=36.0

Q ss_pred             CCCCCCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeC----CCcEEEEeChHhHhHH
Q 011210           47 PGDMGWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIF----GSPCVIVVAPEACKQV  108 (491)
Q Consensus        47 Pgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~----~~~~vvv~~~~~~~~i  108 (491)
                      +-|...-++|++..       .-..+.+.++..+||+  |..+.+.    |.-.|-..+++.++.+
T Consensus         8 ~~~~~~l~V~~Lp~-------~~te~~L~~~F~~~G~--i~~v~i~~~srGfaFV~F~~~~~A~~~   64 (89)
T 3d2w_A            8 HHHGSKVFVGRCTE-------DMTAEELQQFFCQYGE--VVDVFIPKPFRAFAFVTFADDKVAQSL   64 (89)
T ss_dssp             ---CCEEEEESCCT-------TCCHHHHHHHHTTTSC--EEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred             CCCCCEEEEeCCCC-------CCCHHHHHHHHhccCC--EEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence            33334567787642       2356778889999999  9888874    3456777888888764


No 83 
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.54  E-value=73  Score=18.61  Aligned_cols=6  Identities=33%  Similarity=0.152  Sum_probs=2.3

Q ss_pred             HHHHhh
Q 011210           23 FGVLRR   28 (491)
Q Consensus        23 ~~~~~~   28 (491)
                      ++++++
T Consensus        32 ~~~~RR   37 (44)
T 2ks1_B           32 GLFMRR   37 (44)
T ss_dssp             HHHHHT
T ss_pred             HHHhhh
Confidence            333343


No 84 
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.19  E-value=74  Score=22.39  Aligned_cols=53  Identities=9%  Similarity=0.095  Sum_probs=38.4

Q ss_pred             ccccccHHHHhhhhcCCchHHHHHHHHHcC-CcceEEeeeCCCcEEEEeChHhHhHHhcC
Q 011210           53 PLVGNMLSHQKAFKSSEPQSFIYNLFERYG-RKGIYRNHIFGSPCVIVVAPEACKQVFLD  111 (491)
Q Consensus        53 P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG-~~~v~~~~~~~~~~vvv~~~~~~~~i~~~  111 (491)
                      -+++|+..=..   .......+.++..+|| .  |..+ .+|.-+|...+.+.++..++.
T Consensus        12 lYV~NL~~~~~---~~~lk~~L~~lF~~yGG~--Vl~V-tgG~AfV~F~~~esA~~A~~~   65 (96)
T 2diu_A           12 LYVYNLPANKD---GKSVSNRLRRLSDNCGGK--VLSI-TGCSAILRFINQDSAERAQKR   65 (96)
T ss_dssp             EEEESCCTTSC---HHHHHHHHHHHHHTTTCC--EEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred             EEEeCCCCcCC---HHHHHHHHHHHHHHcCCe--eEEE-ecCEEEEEECCHHHHHHHHHH
Confidence            34787654321   1233456788999995 8  9998 568999999999999888754


No 85 
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=26.84  E-value=77  Score=21.92  Aligned_cols=51  Identities=14%  Similarity=0.203  Sum_probs=34.1

Q ss_pred             CCccccccHHHHhhhhcCCchHHHHHHHHHcCCcceEEeeeCC-C--cEEEEeChHhHhHHhc
Q 011210           51 GWPLVGNMLSHQKAFKSSEPQSFIYNLFERYGRKGIYRNHIFG-S--PCVIVVAPEACKQVFL  110 (491)
Q Consensus        51 ~~P~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~~~v~~~~~~~-~--~~vvv~~~~~~~~i~~  110 (491)
                      +|-++||+..=       -....+.++..+||+  |..+++.- +  -.|-..+++.+....+
T Consensus         8 ~wL~VgNL~~~-------~te~~L~~lF~q~G~--V~~~~l~~~kGfaFVey~~~~eA~~Ai~   61 (89)
T 2wbr_A            8 SWLLLKNLTAQ-------IDGPTLRTLCMQHGP--LVSFHPYLNQGIALCKYTTREEANKAQM   61 (89)
T ss_dssp             CEEEEECCCTT-------CCCHHHHHHHHHHSC--EEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred             ceEEEeCCCcc-------CCHHHHHHHHHhhCC--EEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence            57778887432       346789999999999  98887632 2  3444566666655543


No 86 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=24.75  E-value=61  Score=15.53  Aligned_cols=12  Identities=17%  Similarity=0.304  Sum_probs=9.4

Q ss_pred             hHHHHHHHHHHH
Q 011210          322 QTLRKAKEEQED  333 (491)
Q Consensus       322 ~~~~~lr~Ei~~  333 (491)
                      .+|.|+|.|+..
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            578899999764


Done!